mRNA_M-pyrifera_M_contig76932.18133.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76932.18133.1
Unique NamemRNA_M-pyrifera_M_contig76932.18133.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76932.18133.1 vs. uniprot
Match: A0A1Y1WKC5_9FUNG (Nop domain-containing protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WKC5_9FUNG)

HSP 1 Score: 197 bits (501), Expect = 2.820e-56
Identity = 112/283 (39.58%), Postives = 177/283 (62.54%), Query Frame = 1
Query:   13 DVARLLGDDAFQAHLAEIQRSMKEDQRPALLEGSLEDHPQYRLVCKSNEYLTQLQDELETIHNFVGEKYAKKFPELFGVVPSAMRYMRTVRAIGNATDMTKVDLSGVLSGKDVMNVMVTGSQSSGRKLSEDELAVVLEGCDAAEAVADATSVLLEFVESRMPAVAPNLTALLGARVAAKLVAIAGGLAALAGIPGCNIKLLGQQRSAGRGAAMGGYSRAVKSADQLGVVHEVDLVQRVPREFKLRIASLLGNKAALAARIDASRGARDGRNGREFRDMVENRI 861
            D+A +      Q  LA IQ S++       +EG +ED P Y L+  +N++  ++ +E+  +H ++ + Y ++FPEL  +V + + Y RTV+AIG ATD+TKVDL  +L     M V VTGS ++GR L  DEL  +L+ CD    + DA + ++ F+ESRMP +APNLTA++G+  AAKL+A AGGL AL+ IP CNI++LG+ +SAG G +      A+ +   +G+V   D+V+ VP +F+ ++   +  K ALA R+DA   + DG  G++FR  ++ ++
Sbjct:   45 DIAPISSSHELQTLLANIQASLEVAAADKKVEGRIEDDPDYLLMVAANKHTAEIANEMVDMHRYILDHYKQRFPELETLVRNPIDYTRTVKAIGAATDITKVDLENILPNAIRMVVTVTGSTTTGRVLDNDELQHILDACDCLLRMQDALNQIISFIESRMPLIAPNLTAVVGSSTAAKLIAEAGGLTALSKIPSCNIQVLGKTQSAGLGLS------AITTQKHVGIVFYSDVVRSVPEDFRHKMMRKVSAKCALAVRVDAQHESADGALGKKFRTDLDAQV 321          
BLAST of mRNA_M-pyrifera_M_contig76932.18133.1 vs. uniprot
Match: A0A1Y1YZQ7_9FUNG (Nop domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YZQ7_9FUNG)

HSP 1 Score: 194 bits (492), Expect = 4.220e-55
Identity = 109/287 (37.98%), Postives = 170/287 (59.23%), Query Frame = 1
Query:    1 ERVGDVARLLGDDAFQAHLAEIQRSMKEDQRPALLEGSLEDHPQYRLVCKSNEYLTQLQDELETIHNFVGEKYAKKFPELFGVVPSAMRYMRTVRAIGNATDMTKVDLSGVLSGKDVMNVMVTGSQSSGRKLSEDELAVVLEGCDAAEAVADATSVLLEFVESRMPAVAPNLTALLGARVAAKLVAIAGGLAALAGIPGCNIKLLGQQRSAGRGAAMGGYSRAVKSADQLGVVHEVDLVQRVPREFKLRIASLLGNKAALAARIDASRGARDGRNGREFRDMVENRI 861
            E V DVA+L         L +I+      +    L G +E+ P+Y+L+ K+N+    +  E+ +IH F+ + YA KFPEL  +VPSA+ Y R V+ IGN +D+TKVDL  +L    +M V VTGS ++GR L E E  +V++ CD A  + +A   +LE+VESRM  +APNL+A++G+  AAKL+  AGGL +L+ +P CNI++LG  +    G +    +R        G ++  + VQR+P + + +   +L  K  LAAR+D    + DG  GR+FR+ ++ +I
Sbjct:   30 ETVDDVAKLHSSKELNEVLTKIEHFKGVPREATQLVGVMEEDPEYKLIVKANDLTAAIDTEIISIHKFIRDHYAPKFPELESLVPSALDYARAVKTIGNESDITKVDLRSILPSATIMVVTVTGSTTAGRPLDEREYKIVMDACDMALQLDEAKKTILEYVESRMSFIAPNLSAIIGSATAAKLMGAAGGLTSLSKMPACNIQVLGATKKTQTGFSSVTINR------HAGFIYHSEYVQRIPSDLRQKATRILAAKCTLAARVDRGHESIDGSIGRKFREEIDQKI 310          
BLAST of mRNA_M-pyrifera_M_contig76932.18133.1 vs. uniprot
Match: A0A8H7UL76_MORIS (Nop domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UL76_MORIS)

HSP 1 Score: 192 bits (489), Expect = 2.460e-54
Identity = 112/288 (38.89%), Postives = 177/288 (61.46%), Query Frame = 1
Query:    7 VGDVARLLGDDAFQAHLAEIQRSMKEDQ---RPALLEGSLEDHPQYRLVCKSNEYLTQLQDELETIHNFVGEKYAKKFPELFGVVPSAMRYMRTVRAIGNATDMTKVDLSGVLSGKDVMNVMVTGSQSSGRKLSEDELAVVLEGCDAAEAVADATSVLLEFVESRMPAVAPNLTALLGARVAAKLVAIAGGLAALAGIPGCNIKLLGQQRSAGRGAAMGGYSRAVKSADQLGVVHEVDLVQRVPREFKLRIASLLGNKAALAARIDASRGARDGRNGREFRDMVENRI 861
            V  +++LL   A Q  L  I+   K+D+   RP  + G +ED P+YR++ +SN  + +L +E+ T+H F+ + YA KFPEL  +V + + Y+  V+ IGN  D+TKVDL  +L    +M V VTGS ++GR+L+++E  +  E CD A  + +A   ++++VESRM  +APNL+ ++G+  AAKL+  AGGL  L  +P CN+++LG+ R    G     +SRA+      G ++  +L  R+P + + +I  +L  K  LAARID +  +RDG +GR  RD VEN+I
Sbjct:   65 VKQISKLLNSKATQDILTAIEDFKKQDRDQSRP--ISGPIEDDPEYRVIVQSNNLVVELDNEVLTVHKFIRDHYAPKFPELESLVLNPLDYVHAVKTIGNEMDITKVDLHSILPSATIMVVTVTGSTTNGRQLTDEEWKITNEACDMALGLDNARKTIIDYVESRMNFIAPNLSQVVGSATAAKLLGAAGGLTGLCKMPACNVQVLGKNRKTNTG-----FSRALIYKHG-GYIYYSELCSRLPSDLRPKIQKMLAAKCVLAARIDKAHESRDGHSGRTMRDDVENKI 344          
BLAST of mRNA_M-pyrifera_M_contig76932.18133.1 vs. uniprot
Match: UPI0002C30F6A (U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 n=3 Tax=Rosoideae TaxID=171638 RepID=UPI0002C30F6A)

HSP 1 Score: 189 bits (479), Expect = 5.650e-53
Identity = 108/249 (43.37%), Postives = 157/249 (63.05%), Query Frame = 1
Query:  115 LEDHPQYRLVCKSNEYLTQLQDELETIHNFVGEKYAKKFPELFGVVPSAMRYMRTVRAIGNATDMTKVDLSGVLSGKDVMNVMVTGSQSSGRKLSEDELAVVLEGCDAAEAVADATSVLLEFVESRMPAVAPNLTALLGARVAAKLVAIAGGLAALAGIPGCNIKLLGQQRSAGRGAAMGGYSRAVKSADQLGVVHEVDLVQRVPREFKLRIASLLGNKAALAARIDASRGARDGRNGREFRDMVENRI 861
            LED P+Y+L+   N     +++EL  IHNF+ +KY  KFPEL  +V   + Y R V+ IGN  D+T VDL G+L    +M V VT S +SG+ L ED L  +++ CD A A+  A   +LEFVESRM  +APNL+A++G+ VAAKL+ +AGGLAALA +P CN++LLG ++       + G+S A  S  ++G V E ++ Q  P   ++R   LL  K+ LAAR+D++RG   G  G+ FR+ +  +I
Sbjct:   88 LEDDPEYQLIVDCNALSVDIENELVIIHNFIRDKYRPKFPELESLVHHPIDYARVVQKIGNEMDVTLVDLEGLLPSATIMVVSVTASTTSGKPLPEDVLEKIVDACDRALALDSAKKKVLEFVESRMGFIAPNLSAIVGSAVAAKLMGMAGGLAALAKMPACNVQLLGAKKK-----NLAGFSTAT-SQYRVGYVEETEIFQTTPPALRMRAGRLLAAKSTLAARVDSTRGDPSGNTGKAFREEIHKKI 330          
BLAST of mRNA_M-pyrifera_M_contig76932.18133.1 vs. uniprot
Match: A0A498KP32_MALDO (Nop domain-containing protein n=17 Tax=Pentapetalae TaxID=1437201 RepID=A0A498KP32_MALDO)

HSP 1 Score: 188 bits (478), Expect = 7.760e-53
Identity = 107/249 (42.97%), Postives = 157/249 (63.05%), Query Frame = 1
Query:  115 LEDHPQYRLVCKSNEYLTQLQDELETIHNFVGEKYAKKFPELFGVVPSAMRYMRTVRAIGNATDMTKVDLSGVLSGKDVMNVMVTGSQSSGRKLSEDELAVVLEGCDAAEAVADATSVLLEFVESRMPAVAPNLTALLGARVAAKLVAIAGGLAALAGIPGCNIKLLGQQRSAGRGAAMGGYSRAVKSADQLGVVHEVDLVQRVPREFKLRIASLLGNKAALAARIDASRGARDGRNGREFRDMVENRI 861
            LED P+Y+L+   N     +++E+  IHNF+ +KY  KFPEL  +V   + Y R V+ IGN  D+T VDL G+L    +M V VT S +SG+ L ED LA ++E CD A A+  A  ++L+FVESRM  +APNL+A++G+ VAAKL+  AGGL +LA +P CN++LLG +R       + G+S A  S  ++G V + ++ Q  P   ++R   LL  K+ LAAR+D++RG   G  GR FR+ +  +I
Sbjct:   88 LEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDKYRPKFPELESLVHHPIDYARVVKKIGNEMDVTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLAKIVEACDRALALDSAKKMVLDFVESRMGFIAPNLSAIVGSAVAAKLMGTAGGLTSLAKMPACNVQLLGAKRK-----NLAGFSTAT-SHFRVGYVEQTEIFQSTPPSLRMRACRLLAAKSTLAARVDSTRGDPSGNTGRAFREEIRKKI 330          
BLAST of mRNA_M-pyrifera_M_contig76932.18133.1 vs. uniprot
Match: UPI000C1D3ABC (U4/U6 small nuclear ribonucleoprotein Prp31 homolog n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D3ABC)

HSP 1 Score: 187 bits (476), Expect = 1.320e-52
Identity = 107/249 (42.97%), Postives = 157/249 (63.05%), Query Frame = 1
Query:  115 LEDHPQYRLVCKSNEYLTQLQDELETIHNFVGEKYAKKFPELFGVVPSAMRYMRTVRAIGNATDMTKVDLSGVLSGKDVMNVMVTGSQSSGRKLSEDELAVVLEGCDAAEAVADATSVLLEFVESRMPAVAPNLTALLGARVAAKLVAIAGGLAALAGIPGCNIKLLGQQRSAGRGAAMGGYSRAVKSADQLGVVHEVDLVQRVPREFKLRIASLLGNKAALAARIDASRGARDGRNGREFRDMVENRI 861
            LED P+Y+L+ + N     +++EL  IHNF+ +KY  KFPEL  +V   + Y R V+ IGN  D+T VDL G+L    +M + VT S +SG+ L ED L   L+ CD A A+  A   +L+FVESRM  +APNL+A++G+ VAAKL+  AGGL ALA +P CN++LLG ++       + G+S A  S  ++G + + ++ Q  P   ++R   LL  K+ LAAR+D++RG   G+NGR FRD +  +I
Sbjct:   88 LEDDPEYQLIVECNALSVDIENELVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVISVTASTTSGKPLPEDVLQRTLDACDRALALDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLVALAKMPACNVQLLGAKKK-----NLAGFSTAT-SQFRVGYLEQTEIFQSTPPSLRMRACRLLAAKSTLAARVDSTRGDPTGKNGRSFRDEILKKI 330          
BLAST of mRNA_M-pyrifera_M_contig76932.18133.1 vs. uniprot
Match: A0A7S4DKU2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKU2_HETAK)

HSP 1 Score: 186 bits (473), Expect = 1.540e-52
Identity = 116/288 (40.28%), Postives = 176/288 (61.11%), Query Frame = 1
Query:   16 VARLLGDDAFQAHLAEIQRSMK------EDQRPALLEGSLEDHPQYRLVCKSNEYLTQLQDELETIHNFVGEKYAKKFPELFGVVPSAMRYMRTVRAIGNATDMTKVDLSGVLSGKDVMNVMVTGSQSSGRKLSEDELAVVLEGCDAAEAVADATSVLLEFVESRMPAVAPNLTALLGARVAAKLVAIAGGLAALAGIPGCNIKLLGQQRSAGRGAAMGGYSRAVKSADQLGVVHEVDLVQRVPREFKLRIASLLGNKAALAARIDASRGARDGRNGREFRDMVENRI 861
            V  L     FQ HL  +  ++       + QR A     LE +P+Y+L+  SN+ +  + DE+  IH +V + Y+KKFPEL  ++P+ + YM+ V+ IGN  DMT+V+LS +L    VM V VTGS +SG+ L E +LA  LEG  AA A+  A + +L FVESRM  +APNL ALLG+R+AA L+A+AGGL AL+ IP CN++++GQ++      A+ G+  A  +    G+++  +LVQ  P   + +   +   K ALAAR+D+ + A  G+ G+E R  +E++I
Sbjct:    9 VLALADSPRFQEHLGRVDAALAAGGGVVDAQRFA--GARLERNPEYQLIVDSNQLMQDIDDEIINIHRYVCDVYSKKFPELESLLPNKLEYMQVVQRIGNEMDMTEVELSDILPSASVMLVSVTGSTTSGQPLPEADLAECLEGARAALALDAAKAKVLGFVESRMALIAPNLVALLGSRLAAVLMALAGGLLALSKIPCCNLQVMGQEKR-----ALAGFGNAA-AMKHTGIIYYSELVQSCPVGLRQKALKVTAAKCALAARVDSYQSAPSGQKGQELRQEIEDKI 288          
BLAST of mRNA_M-pyrifera_M_contig76932.18133.1 vs. uniprot
Match: V4L1F9_EUTSA (Nop domain-containing protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4L1F9_EUTSA)

HSP 1 Score: 187 bits (474), Expect = 1.700e-52
Identity = 98/243 (40.33%), Postives = 153/243 (62.96%), Query Frame = 1
Query:  133 YRLVCKSNEYLTQLQDELETIHNFVGEKYAKKFPELFGVVPSAMRYMRTVRAIGNATDMTKVDLSGVLSGKDVMNVMVTGSQSSGRKLSEDELAVVLEGCDAAEAVADATSVLLEFVESRMPAVAPNLTALLGARVAAKLVAIAGGLAALAGIPGCNIKLLGQQRSAGRGAAMGGYSRAVKSADQLGVVHEVDLVQRVPREFKLRIASLLGNKAALAARIDASRGARDGRNGREFRDMVENRI 861
            Y+L+   N+ L  ++DE+  +HNF+  KY  KF EL  +VP A+ Y R V+ IGN TD+T VDL  +L    +M V +  S + G+ L ED L   ++ CD A  +  A   +LEF E++M  +APNL+A++G  VAAKL+  AGGL+ LA +P C+++LLG++R      ++ G+S A   + ++G + + ++ Q  P E +LR++ LL  K+ LAARIDA +G   G+NG+ FR+ + N+I
Sbjct:   70 YKLIMDCNQLLVDIEDEITIVHNFIRYKYRLKFQELESLVPQAIDYARVVKQIGNETDLTLVDLKDLLKQHTIMTVKLAASTTKGKPLPEDVLQKTMDACDRAIDLDSAKKKILEFTETKMVCIAPNLSAIVGCAVAAKLMGTAGGLSELANMPACHVRLLGKKRK-----SLDGFSSAATQSSRVGYLEQTEIFQSTPPELRLRVSKLLACKSTLAARIDAVKGDPSGKNGKAFREEIRNKI 307          
BLAST of mRNA_M-pyrifera_M_contig76932.18133.1 vs. uniprot
Match: UPI00053C4584 (U4/U6 small nuclear ribonucleoprotein Prp31 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C4584)

HSP 1 Score: 187 bits (475), Expect = 2.180e-52
Identity = 111/282 (39.36%), Postives = 169/282 (59.93%), Query Frame = 1
Query:   16 VARLLGDDAFQAHLAEIQRSMKEDQRPALLEGSLEDHPQYRLVCKSNEYLTQLQDELETIHNFVGEKYAKKFPELFGVVPSAMRYMRTVRAIGNATDMTKVDLSGVLSGKDVMNVMVTGSQSSGRKLSEDELAVVLEGCDAAEAVADATSVLLEFVESRMPAVAPNLTALLGARVAAKLVAIAGGLAALAGIPGCNIKLLGQQRSAGRGAAMGGYSRAVKSADQLGVVHEVDLVQRVPREFKLRIASLLGNKAALAARIDASRGARDGRNGREFRDMVENRI 861
            V++L     +   + +++ ++ +    A  E  LED P+YRL+   N+    +++E+  IHNF+ +KY  KFPEL  +V   + Y R V+ IGN  D+T VDL G+L    +M V VT S +SG+ L ED L   +E CD A  +  A   +L+FVESRM  +APNL+A++G+ VAAKL+ IAGGL+ALA +P CN++LLG ++       + G+S A  S  ++G + + ++ Q  P   ++R   LL  K+ LAAR+DA RG   G NGR  R+ +  +I
Sbjct:   54 VSKLQKTQRYADIMQKVEEALVKGSDGAGKEAVLEDDPEYRLIVDCNQLSVDIENEVVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIEACDRALELDSARKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGIAGGLSALAKMPACNVQLLGHKKK-----NLAGFSTAT-SQFRVGFLEQTEVFQSTPPALRMRACRLLAAKSTLAARVDAIRGDLSGANGRGLREEIRKKI 329          
BLAST of mRNA_M-pyrifera_M_contig76932.18133.1 vs. uniprot
Match: A0A022QHR8_ERYGU (Nop domain-containing protein n=11 Tax=Lamiales TaxID=4143 RepID=A0A022QHR8_ERYGU)

HSP 1 Score: 185 bits (470), Expect = 1.110e-51
Identity = 109/282 (38.65%), Postives = 169/282 (59.93%), Query Frame = 1
Query:   16 VARLLGDDAFQAHLAEIQRSMKEDQRPALLEGSLEDHPQYRLVCKSNEYLTQLQDELETIHNFVGEKYAKKFPELFGVVPSAMRYMRTVRAIGNATDMTKVDLSGVLSGKDVMNVMVTGSQSSGRKLSEDELAVVLEGCDAAEAVADATSVLLEFVESRMPAVAPNLTALLGARVAAKLVAIAGGLAALAGIPGCNIKLLGQQRSAGRGAAMGGYSRAVKSADQLGVVHEVDLVQRVPREFKLRIASLLGNKAALAARIDASRGARDGRNGREFRDMVENRI 861
            V++L     F   + +++ +++     +     LED P+Y+L+   N     +++E+  IHNF+ +KY  KFPEL  +V   + Y R V+ IGN  D+T VDL G+L    +M V VT S +SG+ L ED L   ++ CD A A+  A   +L+FVESRM  +APNL+A++G+ VAAKL+  AGGL+ALA +P CN++LLG +R       + G+S A  S  ++G + + ++ Q  P   K+R   LL  K+ LAAR+D++RG   G+ GR FR  ++ +I
Sbjct:   55 VSKLQKSQRFADIIMKVENALERGSENSSQAIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIDACDRALALDSAKKNVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKRK-----NLAGFSTAT-SQFRVGYIEQTEIFQGTPPSLKMRACRLLAAKSTLAARVDSTRGDPTGKTGRTFRADIQKKI 330          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76932.18133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1WKC5_9FUNG2.820e-5639.58Nop domain-containing protein n=1 Tax=Linderina pe... [more]
A0A1Y1YZQ7_9FUNG4.220e-5537.98Nop domain-containing protein n=1 Tax=Basidiobolus... [more]
A0A8H7UL76_MORIS2.460e-5438.89Nop domain-containing protein n=1 Tax=Mortierella ... [more]
UPI0002C30F6A5.650e-5343.37U4/U6 small nuclear ribonucleoprotein Prp31 isofor... [more]
A0A498KP32_MALDO7.760e-5342.97Nop domain-containing protein n=17 Tax=Pentapetala... [more]
UPI000C1D3ABC1.320e-5242.97U4/U6 small nuclear ribonucleoprotein Prp31 homolo... [more]
A0A7S4DKU2_HETAK1.540e-5240.28Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
V4L1F9_EUTSA1.700e-5240.33Nop domain-containing protein n=1 Tax=Eutrema sals... [more]
UPI00053C45842.180e-5239.36U4/U6 small nuclear ribonucleoprotein Prp31 n=2 Ta... [more]
A0A022QHR8_ERYGU1.110e-5138.65Nop domain-containing protein n=11 Tax=Lamiales Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76932contigM-pyrifera_M_contig76932:153..1013 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score192.2
Seed ortholog evalue3.3e-46
Seed eggNOG ortholog2880.D8LKU3
Preferred namePRPF31
KEGG koko:K12844
KEGG Pathwayko03040,map03040
KEGG ModuleM00354
Hectar predicted targeting categoryother localisation
GOsGO:0000244,GO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0001654,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005687,GO:0005690,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006325,GO:0006342,GO:0006346,GO:0006355,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0007275,GO:0007423,GO:0008150,GO:0008152,GO:0008380,GO:0009266,GO:0009409,GO:0009628,GO:0009791,GO:0009845,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0015030,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016569,GO:0016604,GO:0016607,GO:0017069,GO:0019219,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0030621,GO:0030622,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0034708,GO:0035097,GO:0040029,GO:0043010,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044665,GO:0044877,GO:0045292,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046540,GO:0048513,GO:0048519,GO:0048523,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051179,GO:0051252,GO:0051253,GO:0051276,GO:0051641,GO:0051716,GO:0060041,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0070417,GO:0070990,GO:0071005,GO:0071011,GO:0071166,GO:0071339,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0090351,GO:0097159,GO:0097525,GO:0097526,GO:0120114,GO:1901360,GO:1901363,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1990234,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.spliceosomal tri-snRNP complex assembly
EggNOG OGsCOG1498@1,KOG2574@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons1
Model size861
Cds size861
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816669.4859536-CDS-M-pyrifera_M_contig76932:152..10131622816669.4859536-CDS-M-pyrifera_M_contig76932:152..1013Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76932 153..1013 +
1692278109.1579785-CDS-M-pyrifera_M_contig76932:152..10131692278109.1579785-CDS-M-pyrifera_M_contig76932:152..1013Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76932 153..1013 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76932.18133.1prot_M-pyrifera_M_contig76932.18133.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76932 153..1013 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76932.18133.1

>prot_M-pyrifera_M_contig76932.18133.1 ID=prot_M-pyrifera_M_contig76932.18133.1|Name=mRNA_M-pyrifera_M_contig76932.18133.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=287bp
ERVGDVARLLGDDAFQAHLAEIQRSMKEDQRPALLEGSLEDHPQYRLVCK
SNEYLTQLQDELETIHNFVGEKYAKKFPELFGVVPSAMRYMRTVRAIGNA
TDMTKVDLSGVLSGKDVMNVMVTGSQSSGRKLSEDELAVVLEGCDAAEAV
ADATSVLLEFVESRMPAVAPNLTALLGARVAAKLVAIAGGLAALAGIPGC
NIKLLGQQRSAGRGAAMGGYSRAVKSADQLGVVHEVDLVQRVPREFKLRI
ASLLGNKAALAARIDASRGARDGRNGREFRDMVENRI
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mRNA from alignment at M-pyrifera_M_contig76932:153..1013+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76932.18133.1 ID=mRNA_M-pyrifera_M_contig76932.18133.1|Name=mRNA_M-pyrifera_M_contig76932.18133.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=861bp|location=Sequence derived from alignment at M-pyrifera_M_contig76932:153..1013+ (Macrocystis pyrifera P11B4 male)
GAACGCGTTGGGGATGTAGCAAGGCTATTGGGGGATGATGCATTTCAAGC ACATCTTGCTGAGATTCAACGTTCGATGAAGGAAGACCAACGACCTGCTT TGTTGGAGGGGTCGTTGGAGGATCACCCACAATACCGTCTTGTTTGCAAG TCAAATGAGTATTTGACGCAATTGCAAGATGAATTGGAGACAATTCATAA CTTTGTAGGGGAAAAGTATGCGAAAAAGTTTCCCGAGTTGTTTGGCGTTG TTCCTTCTGCAATGCGATATATGCGGACAGTTCGTGCCATTGGAAATGCG ACTGATATGACAAAGGTGGACTTGAGTGGTGTGTTGAGTGGGAAGGATGT TATGAATGTCATGGTGACTGGCAGTCAATCGAGTGGACGGAAGTTGAGCG AAGATGAACTTGCAGTTGTGTTGGAAGGGTGTGATGCTGCAGAGGCGGTT GCTGATGCCACGAGTGTGCTATTAGAATTTGTGGAGAGTAGAATGCCAGC AGTTGCCCCTAATTTGACAGCATTATTAGGAGCACGTGTGGCTGCAAAGT TGGTTGCAATTGCAGGTGGTTTGGCAGCGCTGGCTGGAATTCCTGGATGT AACATCAAATTGTTGGGGCAACAAAGAAGTGCAGGACGTGGAGCAGCGAT GGGTGGGTATTCCAGGGCAGTAAAATCTGCAGATCAATTGGGTGTTGTGC ATGAAGTTGACCTTGTCCAACGCGTGCCACGTGAATTCAAACTTCGTATT GCTTCACTCCTTGGAAACAAGGCAGCTTTGGCCGCAAGAATTGATGCAAG TCGTGGTGCACGCGATGGAAGGAATGGGAGAGAATTTCGTGACATGGTGG AAAATCGGATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76932:153..1013+

>mRNA_M-pyrifera_M_contig76932.18133.1 ID=mRNA_M-pyrifera_M_contig76932.18133.1|Name=mRNA_M-pyrifera_M_contig76932.18133.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1722bp|location=Sequence derived from alignment at M-pyrifera_M_contig76932:153..1013+ (Macrocystis pyrifera P11B4 male)
GAACGCGTTGGGGATGTAGCAAGGCTATTGGGGGATGATGCATTTCAAGC
ACATCTTGCTGAGATTCAACGTTCGATGAAGGAAGACCAACGACCTGCTT
TGTTGGAGGGGTCGTTGGAGGATCACCCACAATACCGTCTTGTTTGCAAG
TCAAATGAGTATTTGACGCAATTGCAAGATGAATTGGAGACAATTCATAA
CTTTGTAGGGGAAAAGTATGCGAAAAAGTTTCCCGAGTTGTTTGGCGTTG
TTCCTTCTGCAATGCGATATATGCGGACAGTTCGTGCCATTGGAAATGCG
ACTGATATGACAAAGGTGGACTTGAGTGGTGTGTTGAGTGGGAAGGATGT
TATGAATGTCATGGTGACTGGCAGTCAATCGAGTGGACGGAAGTTGAGCG
AAGATGAACTTGCAGTTGTGTTGGAAGGGTGTGATGCTGCAGAGGCGGTT
GCTGATGCCACGAGTGTGCTATTAGAATTTGTGGAGAGTAGAATGCCAGC
AGTTGCCCCTAATTTGACAGCATTATTAGGAGCACGTGTGGCTGCAAAGT
TGGTTGCAATTGCAGGTGGTTTGGCAGCGCTGGCTGGAATTCCTGGATGT
AACATCAAATTGTTGGGGCAACAAAGAAGTGCAGGACGTGGAGCAGCGAT
GGGTGGGTATTCCAGGGCAGTAAAATCTGCAGATCAATTGGGTGTTGTGC
ATGAAGTTGACCTTGTCCAACGCGTGCCACGTGAATTCAAACTTCGTATT
GCTTCACTCCTTGGAAACAAGGCAGCTTTGGCCGCAAGAATTGATGCAAG
TCGTGGTGCACGCGATGGAAGGAATGGGAGAGAATTTCGTGACATGGTGG
AAAATCGGATCGAACGCGTTGGGGATGTAGCAAGGCTATTGGGGGATGAT
GCATTTCAAGCACATCTTGCTGAGATTCAACGTTCGATGAAGGAAGACCA
ACGACCTGCTTTGTTGGAGGGGTCGTTGGAGGATCACCCACAATACCGTC
TTGTTTGCAAGTCAAATGAGTATTTGACGCAATTGCAAGATGAATTGGAG
ACAATTCATAACTTTGTAGGGGAAAAGTATGCGAAAAAGTTTCCCGAGTT
GTTTGGCGTTGTTCCTTCTGCAATGCGATATATGCGGACAGTTCGTGCCA
TTGGAAATGCGACTGATATGACAAAGGTGGACTTGAGTGGTGTGTTGAGT
GGGAAGGATGTTATGAATGTCATGGTGACTGGCAGTCAATCGAGTGGACG
GAAGTTGAGCGAAGATGAACTTGCAGTTGTGTTGGAAGGGTGTGATGCTG
CAGAGGCGGTTGCTGATGCCACGAGTGTGCTATTAGAATTTGTGGAGAGT
AGAATGCCAGCAGTTGCCCCTAATTTGACAGCATTATTAGGAGCACGTGT
GGCTGCAAAGTTGGTTGCAATTGCAGGTGGTTTGGCAGCGCTGGCTGGAA
TTCCTGGATGTAACATCAAATTGTTGGGGCAACAAAGAAGTGCAGGACGT
GGAGCAGCGATGGGTGGGTATTCCAGGGCAGTAAAATCTGCAGATCAATT
GGGTGTTGTGCATGAAGTTGACCTTGTCCAACGCGTGCCACGTGAATTCA
AACTTCGTATTGCTTCACTCCTTGGAAACAAGGCAGCTTTGGCCGCAAGA
ATTGATGCAAGTCGTGGTGCACGCGATGGAAGGAATGGGAGAGAATTTCG
TGACATGGTGGAAAATCGGATC
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