mRNA_M-pyrifera_M_contig7692.18126.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7692.18126.1
Unique NamemRNA_M-pyrifera_M_contig7692.18126.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig7692.18126.1 vs. uniprot
Match: D7FVX8_ECTSI (Ubiquinol cytochrome c reductase cytochrome c1 prec (ISS) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVX8_ECTSI)

HSP 1 Score: 497 bits (1279), Expect = 8.040e-177
Identity = 242/263 (92.02%), Postives = 251/263 (95.44%), Query Frame = 1 
Query:    1 RASAAAAXXXXXXXXXXXGTAVLCDDAVHTVEYDWPHNGFLQTFDHAAIRRGWQVYREVCSTCHSIKFVAFRNLIGVSHSEAEVKKLAAEFEVEDGPNDEGEMFERPAKPSDRIPGPYKNEAAGRAANNGAYPPDLSLVVKGRHLGHHYVMSLLTGYTDVPVGKDLLPGLHYNPYFPGTSISMPPPLMDGQVEYPDGTPATVSQMARDVTTFLSWCAEPEMDERKRMGMKWCTAMLIALGLSMYYKRFRWSPLKTRKITYHDI 789
            RA  AAA XXXXXXXX  G  VLCDDAVHTVEYDWPH+GFLQTFDHAAIRRGWQVYREVCSTCHSIKFVAFRNLIGVSHSEAEVKK+AAEFEVEDGPNDEGEMFERPAKPSDRIPGPYKNEA+ RAANNGAYPPDLSLVVKGRHLGHHYVMSLLTGYT+ PVGKDLLPGLHYNPYFPGTSISMPPPLMDGQVEYPDGTPATVSQM++DVTTFL+WCAEPEMDERKRMGMKWC+AM + L LSMYYKRFRWSPLKTRKITYHDI
Sbjct:   19 RARVAAAAXXXXXXXXVGGATVLCDDAVHTVEYDWPHSGFLQTFDHAAIRRGWQVYREVCSTCHSIKFVAFRNLIGVSHSEAEVKKIAAEFEVEDGPNDEGEMFERPAKPSDRIPGPYKNEASARAANNGAYPPDLSLVVKGRHLGHHYVMSLLTGYTEAPVGKDLLPGLHYNPYFPGTSISMPPPLMDGQVEYPDGTPATVSQMSKDVTTFLAWCAEPEMDERKRMGMKWCSAMFLGLALSMYYKRFRWSPLKTRKITYHDI 281
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BLAST of mRNA_M-pyrifera_M_contig7692.18126.1 vs. uniprot
Match: A0A835Z587_9STRA (Cytochrome c1 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z587_9STRA)

HSP 1 Score: 350 bits (899), Expect = 3.890e-119
Identity = 162/245 (66.12%), Postives = 198/245 (80.82%), Query Frame = 1 
Query:   55 GTAVLCDDAVHTVEYDWPHNGFLQTFDHAAIRRGWQVYREVCSTCHSIKFVAFRNLIGVSHSEAEVKKLAAEFEVEDG-PNDEGEMFERPAKPSDRIPGPYKNEAAGRAANNGAYPPDLSLVVKGRHLGHHYVMSLLTGYTDVPVGKDLLPGLHYNPYFPGTSISMPPPLMDGQVEYPDGTPATVSQMARDVTTFLSWCAEPEMDERKRMGMKWCTAMLIALGLSMYYKRFRWSPLKTRKITYHD 786
            G A+  DD + ++ Y WP +G L +FDHAAIRRG+QVYR+VCS+CHSI++++FRN +GV+H EA  KKLA EFEV D  PND+GEMFERPAK  DR PGPY+NEA GRAAN GA PPDLSL+ K RH G  YV +LLTGY D P GKDLLPGL+YNPYF G +I+MPPPLMDGQVEY DGTPATV+QMA+DV+ FL+WCAEPE DERK+ G+K  T + + +G++ YYKR RW+P+KTRKITY +
Sbjct:   28 GAALCNDDCIPSLSYGWPQDGALSSFDHAAIRRGFQVYRQVCSSCHSIQYISFRNFVGVTHDEAGAKKLAEEFEVTDAQPNDDGEMFERPAKLFDRYPGPYRNEAEGRAANGGALPPDLSLMTKARHGGIDYVFALLTGYADSPAGKDLLPGLYYNPYFAGGAIAMPPPLMDGQVEYEDGTPATVTQMAKDVSQFLAWCAEPEHDERKKFGVKAVTVLALGIGITAYYKRLRWAPVKTRKITYME 272
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BLAST of mRNA_M-pyrifera_M_contig7692.18126.1 vs. uniprot
Match: A0A7S1BBA1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BBA1_9STRA)

HSP 1 Score: 332 bits (851), Expect = 9.140e-112
Identity = 152/236 (64.41%), Postives = 184/236 (77.97%), Query Frame = 1 
Query:   73 DDAVHTVEYDWPHNGFLQTFDHAAIRRGWQVYREVCSTCHSIKFVAFRNLIGVSHSEAEVKKLAAEFEVEDGPNDEGEMFERPAKPSDRIPGPYKNEAAGRAANNGAYPPDLSLVVKGRHLGHHYVMSLLTGYTDVPVGKDLLPGLHYNPYFPGTSISMPPPLMDGQVEYPDGTPATVSQMARDVTTFLSWCAEPEMDERKRMGMKWCTAMLIALGLSMYYKRFRWSPLKTRKITY 780
            +  VH   Y W H G L TFDH AIRRG+QVY+EVC+TCHS++ +AFRN +GV+HS  E+K+L AE +VEDGPNDEGEMF+RP K +D++P PY NE AGRAAN GAYPPDLSL++K RH G  YV SLL GYT+ P GKD+LPGL+YNPYF G  I+MPPPL DGQ++Y DGTPATVSQMA+DV  FL+WCAEPE DERK+ G K    +  AL  + +YKRFRWS  KTRK++Y
Sbjct:   40 ESIVHPAHYHWDHAGLLDTFDHKAIRRGYQVYKEVCATCHSVEQIAFRNFVGVTHSTKEMKELTAEIDVEDGPNDEGEMFDRPGKLADKLPSPYANEEAGRAANGGAYPPDLSLMIKARHSGPDYVFSLLAGYTEAPEGKDILPGLYYNPYFDGGLIAMPPPLDDGQLDYEDGTPATVSQMAKDVVIFLNWCAEPEHDERKKEGFKAVLCLAAALVFTGFYKRFRWSIYKTRKLSY 275
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BLAST of mRNA_M-pyrifera_M_contig7692.18126.1 vs. uniprot
Match: A0A7R9YFS8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFS8_9STRA)

HSP 1 Score: 327 bits (837), Expect = 7.840e-110
Identity = 152/242 (62.81%), Postives = 188/242 (77.69%), Query Frame = 1 
Query:   55 GTAVLCDDAVHTVEYDWPHNGFLQTFDHAAIRRGWQVYREVCSTCHSIKFVAFRNLIGVSHSEAEVKKLAAEFEVEDGPNDEGEMFERPAKPSDRIPGPYKNEAAGRAANNGAYPPDLSLVVKGRHLGHHYVMSLLTGYTDVPVGKDLLPGLHYNPYFPGTSISMPPPLMDGQVEYPDGTPATVSQMARDVTTFLSWCAEPEMDERKRMGMKWCTAMLIALGLSMYYKRFRWSPLKTRKITY 780
            G A   DD + ++   W HNGF  ++D+ A+RRG+QVY+EVCS+CHS++ +AFRNL+GV  +E + KKLA  +E+ DGPNDEGEMFERP K SD IPGP+ NE A RAANNGAYPPDLSL+ K R  G  Y+ SLLTGY + P GK +L GLHYNPYFPG +I+MP  LMDGQVEY DGTPAT SQMA+DV TFL+WCAEPE DERK+ G++   A+ +A  ++ YYKRFR+SPLKTR+ITY
Sbjct:   21 GVAFASDDHIPSLNPGWTHNGFFSSYDYKAVRRGFQVYKEVCSSCHSLERIAFRNLVGVCFTEDQAKKLAESYEIVDGPNDEGEMFERPGKLSDYIPGPHANEEAARAANNGAYPPDLSLITKARPGGVDYIFSLLTGYVEAPEGKTMLSGLHYNPYFPGGAIAMPKQLMDGQVEYEDGTPATESQMAKDVATFLAWCAEPEHDERKKAGVRILAALFVAFLITGYYKRFRYSPLKTRQITY 262
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BLAST of mRNA_M-pyrifera_M_contig7692.18126.1 vs. uniprot
Match: A0A448ZSM7_9STRA (Cytochrome c domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSM7_9STRA)

HSP 1 Score: 320 bits (820), Expect = 5.550e-107
Identity = 147/237 (62.03%), Postives = 185/237 (78.06%), Query Frame = 1 
Query:   73 DDAVHTVEYDWPHNGFLQTFDHAAIRRGWQVYREVCSTCHSIKFVAFRNLIGVSHSEAEVKKLAAEFEVEDGPNDEGEMFERPAKPSDRIPGPYKNEAAGRAANNGAYPPDLSLVVKGRHLGHHYVMSLLTGYTDVPVGKDLLPGLHYNPYFPGTSISMPPPLMDGQVEYPDGTPATVSQMARDVTTFLSWCAEPEMDERKRMGMKWCTAMLIALGLSM-YYKRFRWSPLKTRKITY 780
            +D VH   Y W H G+  +FDHAA+RRG+QVYREVC++CHS+ ++ FR L+GV+H++ EVK++A + +V DGPND+GEMFERP KP D IP PY N+ AGRAAN GAYPPDLSL+VK RH G  YV +LLTGY D P GK+++PGLHYNPYFPG +ISMPPPL DG VEY DGT AT+SQ ARD+  FLSW AEPE +ERK+   K+   +L  + LS+ YYKR++W+PLKTR+I Y
Sbjct:   38 EDVVHAPHYPWRHQGYFSSFDHAALRRGYQVYREVCASCHSLHYIRFRELVGVTHTKEEVKQMAMDVDVLDGPNDQGEMFERPGKPYDVIPSPYPNKEAGRAANGGAYPPDLSLMVKARHNGADYVFALLTGYCDPPAGKEMMPGLHYNPYFPGGAISMPPPLNDGGVEYEDGTEATISQQARDIAQFLSWTAEPESEERKKNACKYMV-VLAFMALSVGYYKRWKWAPLKTRQIAY 273
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BLAST of mRNA_M-pyrifera_M_contig7692.18126.1 vs. uniprot
Match: A0A485LA40_9STRA (Aste57867_18449 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LA40_9STRA)

HSP 1 Score: 319 bits (818), Expect = 8.220e-107
Identity = 153/258 (59.30%), Postives = 185/258 (71.71%), Query Frame = 1 
Query:    7 SAAAAXXXXXXXXXXXGTAVLCDDAVHTVEYDWPHNGFLQTFDHAAIRRGWQVYREVCSTCHSIKFVAFRNLIGVSHSEAEVKKLAAEFEVEDGPNDEGEMFERPAKPSDRIPGPYKNEAAGRAANNGAYPPDLSLVVKGRHLGHHYVMSLLTGYTDVPVGKDLLPGLHYNPYFPGTSISMPPPLMDGQVEYPDGTPATVSQMARDVTTFLSWCAEPEMDERKRMGMKWCTAMLIALGLSMYYKRFRWSPLKTRKITY 780
            +AAAA           G     DD +    Y + H G    FD AA+RRG+QVY+EVCSTCHS+  + FR+L+GV+H+E E K LAA+ +V DGPNDEGEMFERP K SD +P PY N+ A  AANNGA PPDLSL+VK RH G  Y+ +L+TGY D P GKD+  GLHYNPYF G +I+MP PL DG+VEY DGTPATVSQMA+DV+ FLSW AEPE DERK+MGM+WC  + +   L+ YYKR RW+PLKTRKI Y
Sbjct:   14 AAAAAGGAVVGGSVLTGVTSFSDDCIPAQHYGFEHQGPFTAFDAAAVRRGYQVYKEVCSTCHSVDKIHFRHLVGVTHTEDEAKALAADIDVVDGPNDEGEMFERPGKLSDPLPKPYANDEAASAANNGAIPPDLSLIVKARHAGADYLFALMTGYIDAPEGKDVGAGLHYNPYFGGGAIAMPAPLEDGKVEYEDGTPATVSQMAKDVSVFLSWAAEPEHDERKKMGMQWCFGLFVTALLTGYYKRMRWAPLKTRKIEY 271
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BLAST of mRNA_M-pyrifera_M_contig7692.18126.1 vs. uniprot
Match: A0A4D9D0D3_9STRA (Cytochrome c domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0D3_9STRA)

HSP 1 Score: 318 bits (815), Expect = 3.190e-106
Identity = 147/242 (60.74%), Postives = 187/242 (77.27%), Query Frame = 1 
Query:   55 GTAVLCDDAVHTVEYDWPHNGFLQTFDHAAIRRGWQVYREVCSTCHSIKFVAFRNLIGVSHSEAEVKKLAAEFEVEDGPNDEGEMFERPAKPSDRIPGPYKNEAAGRAANNGAYPPDLSLVVKGRHLGHHYVMSLLTGYTDVPVGKDLLPGLHYNPYFPGTSISMPPPLMDGQVEYPDGTPATVSQMARDVTTFLSWCAEPEMDERKRMGMKWCTAMLIALGLSMYYKRFRWSPLKTRKITY 780
            G AV   D V +++Y W H+G L ++D+ A+RRG+QVYREVC++CH+++   FRNL+GV+H+E EVKK+A  ++V DGPN EGEMFERP K SD+IPGPY N+ A RAANNGAYPPDLSL+ K R  G  Y+ +LLTGY D P GK +L GL+YNPYFPG +I+M   L DGQ+EY DGTPAT SQM++DV TFL+W AEPE D RK+ G++W  A+L+AL L+ +YKRFRWSPLKT K  Y
Sbjct:   39 GVAVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHTEEEVKKIAESYDVVDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARPGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPGGAIAMARQLQDGQLEYEDGTPATTSQMSKDVATFLAWAAEPEHDYRKKAGVQWIGALLVALALTGFYKRFRWSPLKTAKFHY 280
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BLAST of mRNA_M-pyrifera_M_contig7692.18126.1 vs. uniprot
Match: A0A6G0WRS4_9STRA (Cytochrome c domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRS4_9STRA)

HSP 1 Score: 317 bits (811), Expect = 9.510e-106
Identity = 154/258 (59.69%), Postives = 189/258 (73.26%), Query Frame = 1 
Query:    7 SAAAAXXXXXXXXXXXGTAVLCDDAVHTVEYDWPHNGFLQTFDHAAIRRGWQVYREVCSTCHSIKFVAFRNLIGVSHSEAEVKKLAAEFEVEDGPNDEGEMFERPAKPSDRIPGPYKNEAAGRAANNGAYPPDLSLVVKGRHLGHHYVMSLLTGYTDVPVGKDLLPGLHYNPYFPGTSISMPPPLMDGQVEYPDGTPATVSQMARDVTTFLSWCAEPEMDERKRMGMKWCTAMLIALGLSMYYKRFRWSPLKTRKITY 780
            +AAAA           G     DD++  + Y + H G   +FD+AA+RRG+QVY+EVCSTCHSI  + FR+L+GV+H+EAE KKLA + EV DGPNDEGEMFERP K SD +P PY N+ A  AANNGA PPDLSL+VK RH G  Y+ +LLTGY + P GK+L  GLHYNPYF G +I+M   L DG+V Y DGTPAT SQMA+DV+ FLSW AEPE DERK+MGM+WC  +L+A  L+ YYKR RW+PLKTRKI+Y
Sbjct:   14 AAAAAGGAAVSGCVLTGVTSFSDDSIPALHYGFEHQGPFTSFDYAAVRRGYQVYKEVCSTCHSIDKIHFRHLVGVTHTEAEAKKLAEDIEVVDGPNDEGEMFERPGKLSDPLPKPYANDEAAAAANNGAIPPDLSLIVKARHAGADYLFALLTGYYEPPEGKELGNGLHYNPYFGGGAIAMEKQLEDGKVTYEDGTPATASQMAKDVSIFLSWAAEPEHDERKKMGMQWCFGLLVAGLLTGYYKRMRWAPLKTRKISY 271
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BLAST of mRNA_M-pyrifera_M_contig7692.18126.1 vs. uniprot
Match: A0A7S3PCA1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PCA1_9STRA)

HSP 1 Score: 315 bits (808), Expect = 2.810e-105
Identity = 150/240 (62.50%), Postives = 184/240 (76.67%), Query Frame = 1 
Query:   64 VLCDDAVHTVEYDWPHNGFLQTFDHAAIRRGWQVYREVCSTCHSIKFVAFRNLIGVSHSEAEVKKLAAEFEVEDGPNDEGEMFERPAKPSDRIPGPYKNEAAGRAANNGAYPPDLSLVVKGRHLGHHYVMSLLTGYTDVPVGKDLLPGLHYNPYFPGTSISMPPPLMDGQVEYPDGTPATVSQMARDVTTFLSWCAEPEMDERKRMG-MKWCTAMLIALGLSMYYKRFRWSPLKTRKITY 780
            +L DD VH   + W H GF  ++DHAA+RRG+QVYR+VCS+CHSI+ + +R L+GV+H+E EVK +  E +V DGPNDEGEMFERPAK  D++P PY NE  GRAAN GAYPPDLSL+VK RH GH Y+MSLLTGY D P GK ++ GL+YNPYFPG  ISMPPPL DG VEYPDGT AT+SQ ARD+  FL++ AEPEM++RK+ G +   T   +ALG S Y KR+ W+PLKTRKI Y
Sbjct:   32 LLSDDVVHPPVFPWRHRGFFSSYDHAALRRGFQVYRQVCSSCHSIERIRWRELVGVTHTEEEVKDMCKEVDVLDGPNDEGEMFERPAKLFDKLPKPYMNEEQGRAANGGAYPPDLSLMVKARHEGHDYIMSLLTGYMDPPAGKMMMEGLYYNPYFPGGGISMPPPLQDGGVEYPDGTVATISQQARDIAQFLNFTAEPEMEDRKKFGGLAMFTLAFMALG-SGYMKRWNWAPLKTRKIAY 270
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BLAST of mRNA_M-pyrifera_M_contig7692.18126.1 vs. uniprot
Match: A0A8B8QCA8_9MYRT (LOW QUALITY PROTEIN: cytochrome c1-2, heme protein, mitochondrial-like n=3 Tax=Myrtoideae TaxID=1699513 RepID=A0A8B8QCA8_9MYRT)

HSP 1 Score: 316 bits (809), Expect = 6.650e-105
Identity = 148/248 (59.68%), Postives = 184/248 (74.19%), Query Frame = 1 
Query:   55 GTAVLCDDAVHTVE---YDWPHNGFLQTFDHAAIRRGWQVYREVCSTCHSIKFVAFRNLIGVSHSEAEVKKLAAEFEVEDGPNDEGEMFERPAKPSDRIPGPYKNEAAGRAANNGAYPPDLSLVVKGRHLGHHYVMSLLTGYTDVPVGKDLLPGLHYNPYFPGTSISMPPPLMDGQVEYPDGTPATVSQMARDVTTFLSWCAEPEMDERKRMGMKWCTAMLIALGLSMYYKRFRWSPLKTRKITYHDI 789
            GT    D+A H +E   Y WPH G L ++DHA+IRRG QVY++VC++CHS+  +++R+L+GV+++E EVK +AAE EVEDGPNDEGEMF RP K SDR P PY NEAA R AN GAYPPDLSL+ K RH G +YV +LLTGY D P G  +  GLHYNPYFPG +I+MP  L DG VEY DGTPAT +QM +DV TFLSW AEPEM+ERK MG KW   + +AL  + YY+R RWS LK+RK+  + +
Sbjct:   62 GTVASADEAEHGLECPSYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVEDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVAIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLNVV 309
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7692.18126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVX8_ECTSI8.040e-17792.02Ubiquinol cytochrome c reductase cytochrome c1 pre... [more]
A0A835Z587_9STRA3.890e-11966.12Cytochrome c1 n=2 Tax=Tribonema minus TaxID=303371... [more]
A0A7S1BBA1_9STRA9.140e-11264.41Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7R9YFS8_9STRA7.840e-11062.81Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A448ZSM7_9STRA5.550e-10762.03Cytochrome c domain-containing protein n=1 Tax=Pse... [more]
A0A485LA40_9STRA8.220e-10759.30Aste57867_18449 protein n=1 Tax=Aphanomyces stella... [more]
A0A4D9D0D3_9STRA3.190e-10660.74Cytochrome c domain-containing protein n=2 Tax=Mon... [more]
A0A6G0WRS4_9STRA9.510e-10659.69Cytochrome c domain-containing protein n=1 Tax=Aph... [more]
A0A7S3PCA1_9STRA2.810e-10562.50Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A8B8QCA8_9MYRT6.650e-10559.68LOW QUALITY PROTEIN: cytochrome c1-2, heme protein... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7692contigM-pyrifera_M_contig7692:3795..9692 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score327.4
Seed ortholog evalue3.8e-87
Seed eggNOG ortholog2880.D7FVX8
Preferred nameCYC1
KEGG koko:K00413
KEGG Pathwayko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016
KEGG ModuleM00151,M00152
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005750,GO:0005758,GO:0005829,GO:0006091,GO:0006119,GO:0006122,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006839,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0009055,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0010259,GO:0015672,GO:0015980,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016310,GO:0016491,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032501,GO:0032502,GO:0032991,GO:0033762,GO:0034220,GO:0034641,GO:0034654,GO:0042221,GO:0042773,GO:0042775,GO:0042776,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043434,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045153,GO:0045155,GO:0045275,GO:0045333,GO:0046034,GO:0046390,GO:0046483,GO:0046907,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0055086,GO:0055114,GO:0070013,GO:0070069,GO:0070469,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901698,GO:1901700,GO:1902494,GO:1902600,GO:1990204,GO:1990542
EggNOG free text desc.Cytochrome c1
EggNOG OGsCOG2857@1,KOG3052@2759
COG Functional cat.C
BiGG ReactioniMM904.YOR065W,iND750.YOR065W
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002
Exons6
Model size811
Cds size489
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7692.18126.1prot_M-pyrifera_M_contig7692.18126.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7692 7102..9676 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816669.092294-UTR-M-pyrifera_M_contig7692:3794..39371622816669.092294-UTR-M-pyrifera_M_contig7692:3794..3937Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7692 3795..3937 +
1692278108.9273267-UTR-M-pyrifera_M_contig7692:3794..39371692278108.9273267-UTR-M-pyrifera_M_contig7692:3794..3937Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7692 3795..3937 +
1622816669.1058984-UTR-M-pyrifera_M_contig7692:5869..59751622816669.1058984-UTR-M-pyrifera_M_contig7692:5869..5975Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7692 5870..5975 +
1692278108.9385633-UTR-M-pyrifera_M_contig7692:5869..59751692278108.9385633-UTR-M-pyrifera_M_contig7692:5869..5975Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7692 5870..5975 +
1622816669.1167457-UTR-M-pyrifera_M_contig7692:7044..71011622816669.1167457-UTR-M-pyrifera_M_contig7692:7044..7101Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7692 7045..7101 +
1692278108.9471393-UTR-M-pyrifera_M_contig7692:7044..71011692278108.9471393-UTR-M-pyrifera_M_contig7692:7044..7101Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7692 7045..7101 +
1622816669.1740055-UTR-M-pyrifera_M_contig7692:9676..96921622816669.1740055-UTR-M-pyrifera_M_contig7692:9676..9692Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7692 9677..9692 +
1692278108.9989762-UTR-M-pyrifera_M_contig7692:9676..96921692278108.9989762-UTR-M-pyrifera_M_contig7692:9676..9692Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7692 9677..9692 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816669.127322-CDS-M-pyrifera_M_contig7692:7101..71331622816669.127322-CDS-M-pyrifera_M_contig7692:7101..7133Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7692 7102..7133 +
1692278108.9564452-CDS-M-pyrifera_M_contig7692:7101..71331692278108.9564452-CDS-M-pyrifera_M_contig7692:7101..7133Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7692 7102..7133 +
1622816669.138339-CDS-M-pyrifera_M_contig7692:7843..80371622816669.138339-CDS-M-pyrifera_M_contig7692:7843..8037Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7692 7844..8037 +
1692278108.9659562-CDS-M-pyrifera_M_contig7692:7843..80371692278108.9659562-CDS-M-pyrifera_M_contig7692:7843..8037Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7692 7844..8037 +
1622816669.149614-CDS-M-pyrifera_M_contig7692:9034..91141622816669.149614-CDS-M-pyrifera_M_contig7692:9034..9114Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7692 9035..9114 +
1692278108.9758935-CDS-M-pyrifera_M_contig7692:9034..91141692278108.9758935-CDS-M-pyrifera_M_contig7692:9034..9114Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7692 9035..9114 +
1622816669.1608634-CDS-M-pyrifera_M_contig7692:9493..96761622816669.1608634-CDS-M-pyrifera_M_contig7692:9493..9676Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7692 9494..9676 +
1692278108.9858263-CDS-M-pyrifera_M_contig7692:9493..96761692278108.9858263-CDS-M-pyrifera_M_contig7692:9493..9676Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7692 9494..9676 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7692.18126.1

>prot_M-pyrifera_M_contig7692.18126.1 ID=prot_M-pyrifera_M_contig7692.18126.1|Name=mRNA_M-pyrifera_M_contig7692.18126.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp
MFERPAKPSDRIPGPYKNEAAGRAANNGAYPPDLSLVVKGRHLGHHYVMS
LLTGYTDVPVGKDLLPGLHYNPYFPGTSISMPPPLMDGQVEYPDGTPATV
SQMARDVTTFLSWCAEPEMDERKRMGMKWCTAMLIALGLSMYYKRFRWSP
LKTRKITYHDIK*
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mRNA from alignment at M-pyrifera_M_contig7692:3795..9692+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7692.18126.1 ID=mRNA_M-pyrifera_M_contig7692.18126.1|Name=mRNA_M-pyrifera_M_contig7692.18126.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5898bp|location=Sequence derived from alignment at M-pyrifera_M_contig7692:3795..9692+ (Macrocystis pyrifera P11B4 male)
AGAGCTAGCGCGGCGGCGGCGGCGACGGCGGCGGCGGGGGTGGTCGCGGC
GGGAGGCACGGCAGTGCTCTGCGACGACGCTGTGCACACGGTCGAGTACG
ACTGGCCCCACAATGGTTTTCTGCAGACCTTCGACCACGCGGCGTGAGTA
CCCGCTTCATGTATACCAGTACACCACCAGCCACGAGCCCTCTCATACAA
AGGCATGGCGTAAGGAAGATGAGTGGGGCTGGGCACTGGCACAGTCACTA
TGTACTGGCAGTAGTAATCTACAATCTACTTGATTGACCTGGCCAGTATA
ATCGCCAGTAGTTTTATCTTACGTAACGCCCAAGAAGCACGCCATATTAT
ACTGCGGAAACCCACTTGATGCGTTTCGGGAGGAGAGAGGAGACAGGAGA
CAGGAGACAATAGTATACTGCTGCAATCCAGTATACTTACTGGTTGAATT
TGACGACGGCGTAATCGCTACTGACTGAATCAGCAAGTGTCCAGCCCTAA
AGATGAGGCATGCCATATGGAAAAATCCCTCAAGAAACTCTGGCCGCTGT
TTTTGGGGGAAGTAAGAGATTGGGAAGCGGTTTTACTGATTTTAATGTGG
AACGAACCCTTAATCAAATCATTAAGTCTACGGAGTTATCGTACGATAGC
CTCGGCCAGTATCCCGTTTTCTTCTTGGAGGGCCGGTACTGCTGTACCAG
GATACACGTGGTAGCGGCGTTACTTGATTATTGTGTAGCCCAAACATGAT
CACTACTTGTATTATAAGCCCAAACATTTCCCACTGACGAGGATCCTGAA
CTCTCAAACTAGCCAATTTGCACCCAATGTGTATTGCACAGTAGTAGTAT
TATTTGCGAGCCCCTTCGTTTGTGTATCGGGCTTAGCTTACAACATTTGT
GAGGAATATTTTCATCCGATGTGTATTGCTTGGTATTATTTGCGAGCCCA
TTTGTTTGTGTATCGGTCTTAGCTTACAACATGTACGAAAAATATATACA
TCCGATGTGTATTGCATAGTATTATTTGCAAGTCCATTTGTTCGTGTATC
GGGCTTACAGTAGCTTGCAGTATATATGTACTCGTAAAGCAGTGTAACTC
GGTTGGTGGGTGGGGGTGTAGAGGTCCCCGCGTGAGGAAGTCTGTACTTG
GTACTACTGTATGTATATATCGCCCTACCGTGGGCATGCATAGCGATATT
GGCACTTTTTTATCCTTAAAGTGCTGCTTGTCGACGGTTCCGGACGGGCG
CCGTAGCGACTGCCAAGGAATTCCACTCCATGCACATGCATGCACATCTG
TTTATTTTTTCGTGCACGAGCCCCCGTAGCACTGCAGTTACTCCCGCTGC
TGGGACAGAACCACTCGTATTTTGACACCCGTAGACTGCACTTTCAGGTT
GGAGCACGGAGTAGTCGCACAATTTACACGAGGGGGCATGCCGTATGTAA
GAAGCACGCTGGCTTGTGGAAGTTGTGCTGACTGTCCGTGGTGCTGCTGC
AGTTGTTTGGAAAGTATGCGGAGTCGCCGAGTCTGAGAAGACGCCCTAAA
TCGGTTTTCTCAAGAGTGCCGCCTGCGTACTCGGTGTGTTCTGTCTGTAC
ACCGAGCTCTCAGCGTCAAAGCACGTCTATAAGGAGCTTGCGGTCGCAGT
CGATTCCCCGCTTTGTTCGACTGCTACTACTTGTACTACTTGTACTCCTC
CTCCTACTACTACTACTACTAATAATACCACTACTACTACTACTACTACC
ACTACTACTACTACTACTACTACTACTACTACTGCTACTACTACTGCCAC
TACTACTACTACTACTACTACTGCCACTACTACTACTATTACTACTAGTA
CCTCTACCATTAATACTACTACCTCTACTACCTCTACTACTACTACTGTA
CTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACT
ACTACTACTACTACTACTACTACTACTACTATGAAACTGCTGTAGTCCCG
TTCCTGACCTATGATTCTCCTGCTGTTTCTATTTTGCTTTGTTGGTTACG
CGCCGCGTTTCGCTGGGTGCCACAGAATCCGGCGGGGATGGCAGGTGTAC
CGGGAGGTGTGCTCCACCTGCCACTCGATCAAGTTCGTAGCTTTCCGCAA
CCTCATCGGGGTTTCGCACAGCGAAGCAGAGGTGAGGATGGTGGGCGATG
CTTCTCAGCGGGGGGCCCCAGCAGTTACTCACCCTGATGTATATAGCGGG
ACGGAGAGGGATGGAAGGAGGGAGAGCTGTCAGCCGTCCCGCCCTATTTC
CTTCCTTGCTCGTATCTCCGCACGTCCCAGATGGTTGGTTGGTTTTGTTG
GCCCGCCTGTTTATCGGTGGGTATCAACTATTGTCGCTGTTATGACGTCT
GCGAGTCTGCCTGCCTGCTTGCAGGTGTGGATGTGTGGGTGTAGAGACGA
CCGTAACGTAGCAGGTAGGCCCCCGCTTGGTGGTGTTGACTGTTTACAGG
CACGTGTGATAAACTTAGTTGTGACGTTAGGGTAGGGTGCTGCGTGGTGA
TTTCCTTGAGGCATATGTCATGTGAAGAAAGGAGAGCGCGCTCAGATAGT
ATTGTGTGGGGTTGTGTGTGACGATATAACGATGAAATATTGGCGCTCAG
TTTTTTTTTTGGAGTGGTCATCTTTTGACGATGATGAAGGAGCGGCGAGG
TCGATTTCGATCCCTAATGACGCCGAGTCGCTACAAAGGCTCCCGTTCTC
GTTGTCTTTCTTGCTACTCGTTCGGCGCTTGCCGCTTGTCGCGCACATCA
GGAGCTGCTGCATGCATACTGGTAGAGTTATGTTGACCCTTTTGCTGCTC
CTAAAGCGACCCTGCTCTAATTCCCGAGTCGGAGTTTTGCCCCCGGTGAT
TGGGTGCCACTTTCTAGAGATTATAAGGTTATATTGATTAACGAAACGTC
GCATCAACCCTGCACACAAAGTACCGACGTCCAGCCGACCAACCATGTTC
CGCTGCATTCCTAGCATCTTCCGTCCAGTCCAGTCGCTCACAAAACATTC
AGTCGATCGCCCGCAAGAGCATAGAAGCCGCCCTCAAGATCGGCGCTTTG
TCCACATTAGCGCTGCGTTTATGCCCCGACCGCCCCGCCCCTCGTTTATG
TTTTGCTTTGAGATTTCTTCGCGTCACCGCTTTCCTGTCCCACTATAAAC
GGGAACACTGCTGTGGCGCTTTGTTTTGTTTTTTTCGGACGTGTTGAAAG
GTCAAGAAACTCGCCGCAGAGTTTGAGGTGGAGGACGGGCCCAACGACGA
GGGCGAGATGTTCGAGCGTCCCGCTAAGCCCTCTGACCGGTGAGGAGATG
GACGGTGGATCACACAAGAATATCTCGACGGAAATATGATTCAATGAAGC
TCCTCTCGTGGGGCGGGGGCAGGGAGGCATGCCGGAAGGGAGGGGTGCGG
GGGACGGGTGGGGAGGTGGAGGGGAGGGGGGGGTAGGAGCTGGAAGTGAA
AGAGTTTTTTTCCATGGGTGTGCCCGACGTGCCCGACGATAACAACGCGG
TTTTATCGCCAAGGTTTACAGATACCTCGGAGTGCGCTCTTGGAGCACCT
TCGCGCGCTAGGAATTGAAACGGGTTAGGGAGAAACGGGACACGTCTGGG
GGCGTGGGCACTGCCGACCGCGGTTTGCGCGGGAACTTTCCCCCCCGCCC
TCGCTTTGATACCGGATCGTACCATGGGGCAGTAAAGTGCCTCGAAACAG
AGGCTTTGCGCGGCGACTCGGCCAGCCCCGTAATGAGCATGGAAGAATGC
TCGTGAAATTGAGAAAAGGTTAACACGAATTCCGCAGAGTTGGAAACTGG
GGTCACGAACGTGCGTACGTAAGTGTGCCCGTTCGCCTCCCTCTTCTATA
TAGTAAGTACTATCCATCGATCGCACATGTTTTCCCTTGCGTTCTGCTGC
TGCTGCTGCTGCTGCTGCTGCCATCTGTTTCTTCCGTCGCACAATTTTCC
GCGTCTCCACGACCAACAACAAAATAAAAAAATATATTTGGGACGGTAGT
ATCCCTGGGCCGTACAAGAACGAGGCCGCCGGGCGCGCTGCCAACAACGG
AGCGTACCCCCCAGACCTTTCTCTGGTGGTGAAGGGACGCCACCTGGGGC
ACCACTACGTAATGTCGCTCCTCACTGGGTACACCGACGTGCCCGTGGGG
AAGGACCTTCTGCCGGGGCTGCACTACAACCCTTACTTCCCCGGTAAGAT
GAAGGCGTTTTTCTTGGGGGGGGGGGAGGGTGATGGTGGTGATGGCCGCG
CGTGGTGGGTGGGGTGGGGGCGGGGGTGGCAGCCGTGGTGTACTTGCCTG
GTGAGATTATGGTGCTTGCCTCGATATGGTCGGGGTGGTGGTGATGGTGG
TGATGGTGGGATTGGTGGGTAACCCTTTTTTTTCCCGGTGAGTTTGAGGT
GATTTTTCCCTGGATGTGGTGATGGTGGGTGGTGTGGTTGAGTGGTGGCG
GCGGCGGTGGTAGTGTGCCAGATGGATGACTGGAGCTGTGTGCGTGCTTT
GGTGATGGAAGTTCTTGTTTACACCGGGGGCCCGGCTTTTGTTTACGCAA
CACAGCGTAGTGCGTGTGTTTGTGTTATTTATGCATATTTGTGTAATTGT
GCATGTGTTTACAAAGTAAACGTGTAAAAATCCTCTGTTGTCATTGCAAA
CGGCATGGGGCGCGGGGGGAGGGGGGGGGGAGCGAGGGTTGAGGGACCCA
AGCGGGAGCGCATGCAGAGATGAACACTGAAACAATATTTCACTTTTGTC
CGATGGCGTTCCGAAGACTCCCCCCGCCTGTCCTGCTGCCTTAGGGTCGC
CCAGGGAGCGCCTGTAGTACGACCGTTGTTCGATGCCTCGTTTTCTTTTG
CCTTCGTCCGCCAGGCCTCCTCCGACGGTAGCACCTTTCTGTTTGATACG
GTTGTTCGCATCCGCCAGCGCCACGCTTCTTCACGGTCAAGCATCCCTGC
GAGCCAATAGGTTACGCTCTGCTTCTTGCTTGCGCGCCTGCCTGACTTCT
TGTTGGTTGTCTCTTGGGGGGCTCGTCGGCTTTATCTCCACTCGGATTTT
TCCCGTGTAACCCCGCCCCCCTCCCCTTCCCAACCCTCCCCGCGCCCTCC
GCTTCATGCCCCGTCTCCACGGACGCTTGCCCCATTTCGTACCGCTCGCT
GCATTCACTTGTCGTCGACTGGCTTGGGTGCGTGCCTCAGGGACGTCTAT
CTCCATGCCTCCGCCGCTCATGGACGGGCAGGTCGAGTACCCCGATGGGA
CGCCCGCCACCGTGTCGCAGGTGATATCATATCTTTACCCGGTTCTCCGC
ATCTATATTGTGATCCCTCTGGGGCTTCTGCGGGGGGAAAAGGACGAAGT
CGCAATACGCTGACAGCGTCGGACGCATGTAGCAACCCTGCGCCGCTGGA
TTCGGGGATGGCACTGTTGCCGAACGTTGTTTGTCAAGGACCCTCCCATG
GTCCATACCGGTATTGATAGCGGAGGATAGTAGTACTCGTACATAGGTCT
GTTCGTTTCTCGGAAGTATCGGCTACCTTCAAGGTATTTATATGGCTGCA
GTCGACGACAACTAACGCCGAAGTTGTATGAAACCCTCCCCTCTCTTCGC
CTCCCCTCCTCTCCCCCTCGTTTGTTTTTTTGTCCATTGGATCGAGAAGA
TGGCGAGGGACGTGACAACCTTCCTGTCGTGGTGCGCCGAGCCCGAGATG
GACGAGCGCAAGCGCATGGGCATGAAGTGGTGCACGGCCATGTTGATCGC
CCTGGGCCTCTCCATGTACTACAAGCGCTTCCGGTGGTCGCCCCTCAAAA
CCCGCAAGATCACGTACCACGACATCAAGTAATTGGCGTAGCTTGGGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7692:3795..9692+

>mRNA_M-pyrifera_M_contig7692.18126.1 ID=mRNA_M-pyrifera_M_contig7692.18126.1|Name=mRNA_M-pyrifera_M_contig7692.18126.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=978bp|location=Sequence derived from alignment at M-pyrifera_M_contig7692:3795..9692+ (Macrocystis pyrifera P11B4 male)
ATGTTCGAGCGTCCCGCTAAGCCCTCTGACCGATGTTCGAGCGTCCCGCT
AAGCCCTCTGACCGTATCCCTGGGCCGTACAAGAACGAGGCCGCCGGGCG
CGCTGCCAACAACGGAGCGTACCCCCCAGACCTTTCTCTGGTGGTGAAGG
GACGCCACCTGGGGCACCACTACGTAATGTCGCTCCTCACTGGGTACACC
GACGTGCCCGTGGGGAAGGACCTTCTGCCGGGGCTGCACTACAACCCTTA
CTTCCCCGTATCCCTGGGCCGTACAAGAACGAGGCCGCCGGGCGCGCTGC
CAACAACGGAGCGTACCCCCCAGACCTTTCTCTGGTGGTGAAGGGACGCC
ACCTGGGGCACCACTACGTAATGTCGCTCCTCACTGGGTACACCGACGTG
CCCGTGGGGAAGGACCTTCTGCCGGGGCTGCACTACAACCCTTACTTCCC
CGGGACGTCTATCTCCATGCCTCCGCCGCTCATGGACGGGCAGGTCGAGT
ACCCCGATGGGACGCCCGCCACCGTGTCGCAGGGACGTCTATCTCCATGC
CTCCGCCGCTCATGGACGGGCAGGTCGAGTACCCCGATGGGACGCCCGCC
ACCGTGTCGCAGATGGCGAGGGACGTGACAACCTTCCTGTCGTGGTGCGC
CGAGCCCGAGATGGACGAGCGCAAGCGCATGGGCATGAAGTGGTGCACGG
CCATGTTGATCGCCCTGGGCCTCTCCATGTACTACAAGCGCTTCCGGTGG
TCGCCCCTCAAAACCCGCAAGATCACGTACCACGACATCAAGTAAATGGC
GAGGGACGTGACAACCTTCCTGTCGTGGTGCGCCGAGCCCGAGATGGACG
AGCGCAAGCGCATGGGCATGAAGTGGTGCACGGCCATGTTGATCGCCCTG
GGCCTCTCCATGTACTACAAGCGCTTCCGGTGGTCGCCCCTCAAAACCCG
CAAGATCACGTACCACGACATCAAGTAA
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