mRNA_M-pyrifera_M_contig769.18121.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: D7FYS8_ECTSI (RNA binding motif and ELMO/CED-12 domain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS8_ECTSI) HSP 1 Score: 381 bits (979), Expect = 5.160e-124 Identity = 177/249 (71.08%), Postives = 214/249 (85.94%), Query Frame = 3 Query: 690 AEEWERIDQLQTAENSMPMEKGVSGALQPVSINEGDRTVCTADAMSHFRSQDLDEHKASIVPFEPRQSRFGLFRRSPTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLYLLETQPAFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQFHAFLALCREGPGTHHALHLAKVR 1436 A+EWE IDQL+TAE S+PMEKGV G LQP+SI++ +R V TA+ + +FRSQDL HKA+IVP++P +SRFGLFRR+ L+FP+AEQLR+EVF++A+I Y P D++HRRLIQTIYRR+T EKRACPDVGPHWDT+GFQG DPCTDLNRSMG+ +L QVL+LLE+Q FA V+++ S ADVTGWPF+CVSIGFTK A+ VLR+G CYAECNRR SV+ VVHE+HQAQFHAFL LCR P THHALHLAKVR Sbjct: 232 AKEWEAIDQLRTAERSVPMEKGVGGKLQPISIDQANRLVTTAEVLGYFRSQDLCTHKAAIVPYQPPESRFGLFRRASKLRFPDAEQLRDEVFILAQIKYAPADVVHRRLIQTIYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHLLESQLGFAMVLYRLSLADVTGWPFMCVSIGFTKEALRVLRRGGCYAECNRRGSVLDVVHELHQAQFHAFLELCRTEPATHHALHLAKVR 480
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: A0A836CIH2_9STRA (ELMO/CED-12 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH2_9STRA) HSP 1 Score: 205 bits (522), Expect = 7.460e-56 Identity = 115/256 (44.92%), Postives = 158/256 (61.72%), Query Frame = 3 Query: 690 AEEWERIDQLQTAENSMPMEKGVSGALQPVSINEGDRTVCTADAMSHFR-SQDLDEHKASIVPFEPRQSRFGLFRRS--PTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRA--CPDVGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLYLLETQPAFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKS--VMKVVHEIHQAQFHAFLALCREGPGTHHALHLAKVR 1436 A EW+ ID LQ AE+ + + +P + +V ++A+ R S L+ H+++IVP E GL +R P L P+A+ R+E+FLI +++Y P HRR++QT+YR LT A P+ G HWD IGFQG+DPCTDLNRS G+LSLLQV+ LLE +P AA + + S V GWP +CVSIGFTK AV LR+GA Y NR S +++++ +HQAQFH F+ C + P HHA+HL VR Sbjct: 299 AAEWQAIDTLQGAES---LASFATPGTEP-QFSYTCPSVTLSEALMALRESGTLESHRSAIVPVELPS---GLLKRLAVPRLSIPDADAQRDEIFLIGQVMYNPASFSHRRMLQTVYRGLTGSSAAVCAPETGSHWDAIGFQGLDPCTDLNRSQGILSLLQVMALLEARPEVAAQLMRDSA--VHGWPLMCVSIGFTKEAVAALRRGAIYGAANRHDSGDLLEILSHVHQAQFHDFMRRCHQEPSVHHAVHLCAVR 545
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: A0A7S1TTY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTY8_9STRA) HSP 1 Score: 155 bits (392), Expect = 4.930e-38 Identity = 106/252 (42.06%), Postives = 137/252 (54.37%), Query Frame = 3 Query: 696 EWERIDQ-LQTAENSMPMEKGVSGALQPVSINEGDRTVCTADAMSHFRSQDLDEHKASIVP-FEPRQSRFG-----LFRRSPTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRACPD-VGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLYLLETQPAFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQFHAF-LALCREGPGTHHALHL 1424 EW +++ L+ A + G++G L+ +NE R V + R L+E I P P +S L P L F R+ FL+AK+ Y P H ++ IY LT ACP VG HW+ +GFQG DP TDLNRS+G+LS+LQ L +E + A A IF+ + T WPFL VSI FTK A+D LR GA YAECNRR VM+V+H+ HQA FH + L L RE PGT HL Sbjct: 254 EWAAVERDLEMAPAADGSSVGLAGGLR-APVNERTRLVTLFEVEEQLRYMRLEEAGHDIEPAVAPERSGLAALCACLSPGPPPLAFQGCNAKRDYPFLVAKVKYDPATETHSGALRAIYFHLTGV--ACPAIVGSHWEAVGFQGADPRTDLNRSLGMLSVLQALAFVEKRTAVAQRIFRLTKR--TYWPFLLVSINFTKHALDALRDGALYAECNRRAKVMEVLHDAHQAIFHRYYLKLTRE-PGTDGITHL 499
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: A0A7S1XMI1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMI1_9STRA) HSP 1 Score: 126 bits (316), Expect = 8.210e-31 Identity = 68/120 (56.67%), Postives = 82/120 (68.33%), Query Frame = 3 Query: 1068 VGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLYLLETQPAFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQFHAF-LALCREGPGTHHALHL 1424 V HW+ +GFQG DP TDLNRS+G+LS+LQ L +E + A A IF+ + T WPFL VSI FTK A+D LR GA YAECNRR VM+V+H+ HQA FH + L L RE PGT HL Sbjct: 8 VASHWEAVGFQGADPRTDLNRSLGMLSVLQALAFVEKRTAVAQRIFRLTKR--TYWPFLLVSINFTKHALDALRDGALYAECNRRAKVMEVLHDAHQAIFHRYYLKLTRE-PGTDGITHL 124
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: A0A7M4FZF5_CROPO (ELMO domain containing 3 n=1 Tax=Crocodylus porosus TaxID=8502 RepID=A0A7M4FZF5_CROPO) HSP 1 Score: 126 bits (317), Expect = 2.920e-29 Identity = 82/235 (34.89%), Postives = 126/235 (53.62%), Query Frame = 3 Query: 681 LRAAEEWERIDQLQ--TAENSMPMEKGVSGALQPVSINEGDRTVCTADAMSHFRSQDLDEHKASIVPFEPRQ--SRFGLFRRSPTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLYLLETQPAF--AAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQF 1367 LRA EEWE ++ +Q TA+NS + + +S NE A+ +F++ DL E + I P R+ S F P + + R+ F+IA+ + +H R++QTIY++LT + CP G HW+ +GFQG+DP TDL R G+LSL+QVLY + F A IF+ S +PF +S+ T+ + VLR+ ECNRR V+ V+++++ A F Sbjct: 55 LRAQEEWEALEAIQSGTADNS-------ASPVTLISFNE---------ALQYFQTADLTECRKRIQPTMQRRGLSAVAHFFFGPPRLHQQLQAERDLAFVIAQCGLDNNEKVHMRILQTIYKKLTGSRFGCPRYGAHWEELGFQGLDPGTDL-RGTGMLSLMQVLYFVMDPQTFLLAQDIFKLSQHSTQNFPFCVMSVNITRIVIQVLREERLSRECNRRHQVIAVLNDLYVAMF 272
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: A0A6J0J3I9_9PASS (ELMO domain-containing protein 3 isoform X2 n=2 Tax=Pipridae TaxID=114313 RepID=A0A6J0J3I9_9PASS) HSP 1 Score: 125 bits (315), Expect = 1.110e-28 Identity = 79/246 (32.11%), Postives = 130/246 (52.85%), Query Frame = 3 Query: 681 LRAAEEWERIDQLQTAENSMPMEKGVSGALQPVSINEGDRTVCTADAMSHFRSQDLDEHKASIVPFEPRQSRFGLFR--RSPTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLY-LLETQP-AFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQFHAFLALCREGPGT 1406 LRA EEWE ++++Q+ G + + P I+ A+A+ HF+S L + + + R L R P +P+ R V +A+ + +H R++QTIYR+LT+ R CP G HW+ +GFQG+DP TDL R G+L L+Q+L+ +L+++ + A IFQ S + +PF +S+ T+ + LR+ ECNRR+ V+ V+++++ A F L + GT Sbjct: 46 LRAQEEWEALEEIQSG-------LGGTSPVPPPPIS-------FAEALQHFQSSGLSQSRRKVRGPGRRGGLSVLLRCLGGPPRLWPQLRGERELVLAMAQCALDDSEWVHMRILQTIYRQLTRSHRGCPRYGAHWEELGFQGVDPGTDL-RGTGMLGLMQILFFVLDSRTLSLAREIFQLSQHETQNFPFCIMSVNITRIVIQALREERLSRECNRRQQVIGVLNDLYAAAFLRLFRLWKRQCGT 276
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: A0A7R5L0A8_9PASS (ELMO domain-containing protein 3 isoform X1 n=3 Tax=Pipridae TaxID=114313 RepID=A0A7R5L0A8_9PASS) HSP 1 Score: 125 bits (313), Expect = 2.390e-28 Identity = 79/246 (32.11%), Postives = 130/246 (52.85%), Query Frame = 3 Query: 681 LRAAEEWERIDQLQTAENSMPMEKGVSGALQPVSINEGDRTVCTADAMSHFRSQDLDEHKASIVPFEPRQSRFGLFR--RSPTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLY-LLETQP-AFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQFHAFLALCREGPGT 1406 LRA EEWE ++++Q+ G + + P I+ A+A+ HF+S L + + + R L R P P+ R V +A+ + +H R++QTIYR+LT+ +R CP G HW+ +GFQG+DP TDL R G+L L+Q+L+ +L+++ + A IFQ S + +PF +S+ T+ + LR+ ECNRR+ V+ V+++++ A F L + GT Sbjct: 53 LRAQEEWEALEEIQSG-------LGGTSPVPPPPIS-------FAEALQHFQSSGLSQSRRKVRGPGCRGGLSVLLRCLGGPPRLRPQLRGERELVLAMAQCALDDSEWVHMRILQTIYRQLTRSRRGCPRYGTHWEELGFQGVDPGTDL-RGTGMLGLMQILFFVLDSRTLSLAREIFQLSQHETQNFPFCIMSVNITRIVIQALREERLSRECNRRQQVIGVLNDLYAAAFLQLFRLWKRQCGT 283
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: UPI001C66E397 (ELMO domain-containing protein 3 isoform X1 n=2 Tax=Tyto alba TaxID=56313 RepID=UPI001C66E397) HSP 1 Score: 125 bits (313), Expect = 3.140e-28 Identity = 83/242 (34.30%), Postives = 126/242 (52.07%), Query Frame = 3 Query: 684 RAAEEWERIDQLQTAENSMPMEKGVSGALQPV-SINEGDRTVCTADAMSHFRSQDLDEHKASIVPFEPRQSRFGL--FRRSPTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLYLL---ETQPAFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQFHAFLALCR 1391 RA EEWE ++++Q+ G S + PV S NE A+ HF++ DL E + + RQ L F P P+ + R +A + +H R++QTIY++LT + CP G HW+ +GFQG+DP TDL R G+L L+Q+LY + +T P A IF+ S + +PF +S+ T+ + LR+ ECNRR+ V+ V++++H A AFL L R Sbjct: 57 RAQEEWEAVEEIQSGLG------GTSASAAPVISFNE---------ALQHFQTADLSECRKKVRAMARRQGLAALVHFFFGPPRLQPQLQGERELALAMAHCGLDNNERVHMRILQTIYKKLTHSRLGCPRYGAHWEELGFQGVDPGTDL-RGTGMLGLMQLLYFVMDPQTLP-LAQEIFKLSQHETQNFPFCIMSVNITRIVIQALREERLSRECNRRQQVIAVLNDLHAA---AFLQLYR 278
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: A0A7S0R4F9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0R4F9_9CHLO) HSP 1 Score: 120 bits (301), Expect = 9.440e-28 Identity = 78/202 (38.61%), Postives = 103/202 (50.99%), Query Frame = 3 Query: 816 DAMSHFRSQDLDEHKASIVPFEPRQSRFGLFR-----RSPTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLYLLETQPAFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQFHAFLALCREGPGT 1406 +A F D+ + +V E + F F PTL E R F IAKI + + MH R++Q+I+RRL+ K P VG HW +GFQG+DP TDL R+MG+L LQ+LYL AA I+ S V +P VSIG TK A+ LR+G E +R SVM V++E + FH F R G T Sbjct: 5 EAAGFFAEVDVTPYLGQLVVEEEPSAGFFSFLIKMCFAPPTLT-DELMAERERAFAIAKIKFDESEPMHFRILQSIFRRLSGSKGEVPRVGSHWQDVGFQGVDPATDL-RAMGMLGPLQLLYLATFSSKSAARIYALSRDPVQEFPLAPVSIGLTKHALSALRKGHLSKEIKKRNSVMAVLNEFYLGCFHEFYLRWRNGGKT 204
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: UPI00071CE762 (ELMO domain-containing protein 3 n=1 Tax=Calidris pugnax TaxID=198806 RepID=UPI00071CE762) HSP 1 Score: 123 bits (308), Expect = 1.180e-27 Identity = 80/241 (33.20%), Postives = 127/241 (52.70%), Query Frame = 3 Query: 684 RAAEEWERIDQLQTAENSMPMEKGVSGALQPVSINEGDRTVCTADAMSHFRSQDLDEHKASIVPFEPRQSRFGL--FRRSPTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLYLL---ETQPAFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQFHAFLALCR 1391 RA EEWE ++++Q+ + + A P+S NE A+ +F++ DL E + + RQ L F P P+ + R +A+ + +H R++QTIY++LT K CP G HW+ +GFQG+DP TDL R G+L L+Q+LY + +T P A IF+ S + +PF +S+ T+ + LR+ ECNRR+ V+ V+++++ A AFL L R Sbjct: 45 RAQEEWEAVEEIQSG-----LGGASASASPPISFNE---------ALQYFQTADLSECRKKVQVTVRRQGLAALVHFLFGPPRLQPQLQGERELALAMAQCGLDDNERVHMRILQTIYKKLTCSKLGCPRYGAHWEELGFQGVDPGTDL-RGTGMLGLMQMLYFVMDAQTLP-LAQEIFKLSQHETQNFPFCIMSVNITRIVIQALREECLSRECNRRQQVIAVLNDLYAA---AFLQLYR 266 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig769.18121.1 >prot_M-pyrifera_M_contig769.18121.1 ID=prot_M-pyrifera_M_contig769.18121.1|Name=mRNA_M-pyrifera_M_contig769.18121.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=241bp MSAEFRDAAGVFGSGEQTPATSSSATKKDVARTAALSSSEDDSCNRRKPIback to top mRNA from alignment at M-pyrifera_M_contig769:29564..32962+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig769.18121.1 ID=mRNA_M-pyrifera_M_contig769.18121.1|Name=mRNA_M-pyrifera_M_contig769.18121.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3399bp|location=Sequence derived from alignment at M-pyrifera_M_contig769:29564..32962+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig769:29564..32962+ >mRNA_M-pyrifera_M_contig769.18121.1 ID=mRNA_M-pyrifera_M_contig769.18121.1|Name=mRNA_M-pyrifera_M_contig769.18121.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1446bp|location=Sequence derived from alignment at M-pyrifera_M_contig769:29564..32962+ (Macrocystis pyrifera P11B4 male)back to top |