mRNA_M-pyrifera_M_contig769.18121.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig769.18121.1
Unique NamemRNA_M-pyrifera_M_contig769.18121.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: D7FYS8_ECTSI (RNA binding motif and ELMO/CED-12 domain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS8_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 5.160e-124
Identity = 177/249 (71.08%), Postives = 214/249 (85.94%), Query Frame = 3
Query:  690 AEEWERIDQLQTAENSMPMEKGVSGALQPVSINEGDRTVCTADAMSHFRSQDLDEHKASIVPFEPRQSRFGLFRRSPTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLYLLETQPAFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQFHAFLALCREGPGTHHALHLAKVR 1436
            A+EWE IDQL+TAE S+PMEKGV G LQP+SI++ +R V TA+ + +FRSQDL  HKA+IVP++P +SRFGLFRR+  L+FP+AEQLR+EVF++A+I Y P D++HRRLIQTIYRR+T EKRACPDVGPHWDT+GFQG DPCTDLNRSMG+ +L QVL+LLE+Q  FA V+++ S ADVTGWPF+CVSIGFTK A+ VLR+G CYAECNRR SV+ VVHE+HQAQFHAFL LCR  P THHALHLAKVR
Sbjct:  232 AKEWEAIDQLRTAERSVPMEKGVGGKLQPISIDQANRLVTTAEVLGYFRSQDLCTHKAAIVPYQPPESRFGLFRRASKLRFPDAEQLRDEVFILAQIKYAPADVVHRRLIQTIYRRMTNEKRACPDVGPHWDTVGFQGTDPCTDLNRSMGIFALFQVLHLLESQLGFAMVLYRLSLADVTGWPFMCVSIGFTKEALRVLRRGGCYAECNRRGSVLDVVHELHQAQFHAFLELCRTEPATHHALHLAKVR 480          
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: A0A836CIH2_9STRA (ELMO/CED-12 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH2_9STRA)

HSP 1 Score: 205 bits (522), Expect = 7.460e-56
Identity = 115/256 (44.92%), Postives = 158/256 (61.72%), Query Frame = 3
Query:  690 AEEWERIDQLQTAENSMPMEKGVSGALQPVSINEGDRTVCTADAMSHFR-SQDLDEHKASIVPFEPRQSRFGLFRRS--PTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRA--CPDVGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLYLLETQPAFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKS--VMKVVHEIHQAQFHAFLALCREGPGTHHALHLAKVR 1436
            A EW+ ID LQ AE+   +    +   +P   +    +V  ++A+   R S  L+ H+++IVP E      GL +R   P L  P+A+  R+E+FLI +++Y P    HRR++QT+YR LT    A   P+ G HWD IGFQG+DPCTDLNRS G+LSLLQV+ LLE +P  AA + + S   V GWP +CVSIGFTK AV  LR+GA Y   NR  S  +++++  +HQAQFH F+  C + P  HHA+HL  VR
Sbjct:  299 AAEWQAIDTLQGAES---LASFATPGTEP-QFSYTCPSVTLSEALMALRESGTLESHRSAIVPVELPS---GLLKRLAVPRLSIPDADAQRDEIFLIGQVMYNPASFSHRRMLQTVYRGLTGSSAAVCAPETGSHWDAIGFQGLDPCTDLNRSQGILSLLQVMALLEARPEVAAQLMRDSA--VHGWPLMCVSIGFTKEAVAALRRGAIYGAANRHDSGDLLEILSHVHQAQFHDFMRRCHQEPSVHHAVHLCAVR 545          
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: A0A7S1TTY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTY8_9STRA)

HSP 1 Score: 155 bits (392), Expect = 4.930e-38
Identity = 106/252 (42.06%), Postives = 137/252 (54.37%), Query Frame = 3
Query:  696 EWERIDQ-LQTAENSMPMEKGVSGALQPVSINEGDRTVCTADAMSHFRSQDLDEHKASIVP-FEPRQSRFG-----LFRRSPTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRACPD-VGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLYLLETQPAFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQFHAF-LALCREGPGTHHALHL 1424
            EW  +++ L+ A  +     G++G L+   +NE  R V   +     R   L+E    I P   P +S        L    P L F      R+  FL+AK+ Y P    H   ++ IY  LT    ACP  VG HW+ +GFQG DP TDLNRS+G+LS+LQ L  +E + A A  IF+ +    T WPFL VSI FTK A+D LR GA YAECNRR  VM+V+H+ HQA FH + L L RE PGT    HL
Sbjct:  254 EWAAVERDLEMAPAADGSSVGLAGGLR-APVNERTRLVTLFEVEEQLRYMRLEEAGHDIEPAVAPERSGLAALCACLSPGPPPLAFQGCNAKRDYPFLVAKVKYDPATETHSGALRAIYFHLTGV--ACPAIVGSHWEAVGFQGADPRTDLNRSLGMLSVLQALAFVEKRTAVAQRIFRLTKR--TYWPFLLVSINFTKHALDALRDGALYAECNRRAKVMEVLHDAHQAIFHRYYLKLTRE-PGTDGITHL 499          
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: A0A7S1XMI1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMI1_9STRA)

HSP 1 Score: 126 bits (316), Expect = 8.210e-31
Identity = 68/120 (56.67%), Postives = 82/120 (68.33%), Query Frame = 3
Query: 1068 VGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLYLLETQPAFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQFHAF-LALCREGPGTHHALHL 1424
            V  HW+ +GFQG DP TDLNRS+G+LS+LQ L  +E + A A  IF+ +    T WPFL VSI FTK A+D LR GA YAECNRR  VM+V+H+ HQA FH + L L RE PGT    HL
Sbjct:    8 VASHWEAVGFQGADPRTDLNRSLGMLSVLQALAFVEKRTAVAQRIFRLTKR--TYWPFLLVSINFTKHALDALRDGALYAECNRRAKVMEVLHDAHQAIFHRYYLKLTRE-PGTDGITHL 124          
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: A0A7M4FZF5_CROPO (ELMO domain containing 3 n=1 Tax=Crocodylus porosus TaxID=8502 RepID=A0A7M4FZF5_CROPO)

HSP 1 Score: 126 bits (317), Expect = 2.920e-29
Identity = 82/235 (34.89%), Postives = 126/235 (53.62%), Query Frame = 3
Query:  681 LRAAEEWERIDQLQ--TAENSMPMEKGVSGALQPVSINEGDRTVCTADAMSHFRSQDLDEHKASIVPFEPRQ--SRFGLFRRSPTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLYLLETQPAF--AAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQF 1367
            LRA EEWE ++ +Q  TA+NS       +  +  +S NE         A+ +F++ DL E +  I P   R+  S    F   P     + +  R+  F+IA+      + +H R++QTIY++LT  +  CP  G HW+ +GFQG+DP TDL R  G+LSL+QVLY +     F  A  IF+ S      +PF  +S+  T+  + VLR+     ECNRR  V+ V+++++ A F
Sbjct:   55 LRAQEEWEALEAIQSGTADNS-------ASPVTLISFNE---------ALQYFQTADLTECRKRIQPTMQRRGLSAVAHFFFGPPRLHQQLQAERDLAFVIAQCGLDNNEKVHMRILQTIYKKLTGSRFGCPRYGAHWEELGFQGLDPGTDL-RGTGMLSLMQVLYFVMDPQTFLLAQDIFKLSQHSTQNFPFCVMSVNITRIVIQVLREERLSRECNRRHQVIAVLNDLYVAMF 272          
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: A0A6J0J3I9_9PASS (ELMO domain-containing protein 3 isoform X2 n=2 Tax=Pipridae TaxID=114313 RepID=A0A6J0J3I9_9PASS)

HSP 1 Score: 125 bits (315), Expect = 1.110e-28
Identity = 79/246 (32.11%), Postives = 130/246 (52.85%), Query Frame = 3
Query:  681 LRAAEEWERIDQLQTAENSMPMEKGVSGALQPVSINEGDRTVCTADAMSHFRSQDLDEHKASIVPFEPRQSRFGLFR--RSPTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLY-LLETQP-AFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQFHAFLALCREGPGT 1406
            LRA EEWE ++++Q+         G +  + P  I+        A+A+ HF+S  L + +  +     R     L R    P   +P+    R  V  +A+      + +H R++QTIYR+LT+  R CP  G HW+ +GFQG+DP TDL R  G+L L+Q+L+ +L+++  + A  IFQ S  +   +PF  +S+  T+  +  LR+     ECNRR+ V+ V+++++ A F     L +   GT
Sbjct:   46 LRAQEEWEALEEIQSG-------LGGTSPVPPPPIS-------FAEALQHFQSSGLSQSRRKVRGPGRRGGLSVLLRCLGGPPRLWPQLRGERELVLAMAQCALDDSEWVHMRILQTIYRQLTRSHRGCPRYGAHWEELGFQGVDPGTDL-RGTGMLGLMQILFFVLDSRTLSLAREIFQLSQHETQNFPFCIMSVNITRIVIQALREERLSRECNRRQQVIGVLNDLYAAAFLRLFRLWKRQCGT 276          
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: A0A7R5L0A8_9PASS (ELMO domain-containing protein 3 isoform X1 n=3 Tax=Pipridae TaxID=114313 RepID=A0A7R5L0A8_9PASS)

HSP 1 Score: 125 bits (313), Expect = 2.390e-28
Identity = 79/246 (32.11%), Postives = 130/246 (52.85%), Query Frame = 3
Query:  681 LRAAEEWERIDQLQTAENSMPMEKGVSGALQPVSINEGDRTVCTADAMSHFRSQDLDEHKASIVPFEPRQSRFGLFR--RSPTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLY-LLETQP-AFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQFHAFLALCREGPGT 1406
            LRA EEWE ++++Q+         G +  + P  I+        A+A+ HF+S  L + +  +     R     L R    P    P+    R  V  +A+      + +H R++QTIYR+LT+ +R CP  G HW+ +GFQG+DP TDL R  G+L L+Q+L+ +L+++  + A  IFQ S  +   +PF  +S+  T+  +  LR+     ECNRR+ V+ V+++++ A F     L +   GT
Sbjct:   53 LRAQEEWEALEEIQSG-------LGGTSPVPPPPIS-------FAEALQHFQSSGLSQSRRKVRGPGCRGGLSVLLRCLGGPPRLRPQLRGERELVLAMAQCALDDSEWVHMRILQTIYRQLTRSRRGCPRYGTHWEELGFQGVDPGTDL-RGTGMLGLMQILFFVLDSRTLSLAREIFQLSQHETQNFPFCIMSVNITRIVIQALREERLSRECNRRQQVIGVLNDLYAAAFLQLFRLWKRQCGT 283          
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: UPI001C66E397 (ELMO domain-containing protein 3 isoform X1 n=2 Tax=Tyto alba TaxID=56313 RepID=UPI001C66E397)

HSP 1 Score: 125 bits (313), Expect = 3.140e-28
Identity = 83/242 (34.30%), Postives = 126/242 (52.07%), Query Frame = 3
Query:  684 RAAEEWERIDQLQTAENSMPMEKGVSGALQPV-SINEGDRTVCTADAMSHFRSQDLDEHKASIVPFEPRQSRFGL--FRRSPTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLYLL---ETQPAFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQFHAFLALCR 1391
            RA EEWE ++++Q+         G S +  PV S NE         A+ HF++ DL E +  +     RQ    L  F   P    P+ +  R     +A       + +H R++QTIY++LT  +  CP  G HW+ +GFQG+DP TDL R  G+L L+Q+LY +   +T P  A  IF+ S  +   +PF  +S+  T+  +  LR+     ECNRR+ V+ V++++H A   AFL L R
Sbjct:   57 RAQEEWEAVEEIQSGLG------GTSASAAPVISFNE---------ALQHFQTADLSECRKKVRAMARRQGLAALVHFFFGPPRLQPQLQGERELALAMAHCGLDNNERVHMRILQTIYKKLTHSRLGCPRYGAHWEELGFQGVDPGTDL-RGTGMLGLMQLLYFVMDPQTLP-LAQEIFKLSQHETQNFPFCIMSVNITRIVIQALREERLSRECNRRQQVIAVLNDLHAA---AFLQLYR 278          
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: A0A7S0R4F9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0R4F9_9CHLO)

HSP 1 Score: 120 bits (301), Expect = 9.440e-28
Identity = 78/202 (38.61%), Postives = 103/202 (50.99%), Query Frame = 3
Query:  816 DAMSHFRSQDLDEHKASIVPFEPRQSRFGLFR-----RSPTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLYLLETQPAFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQFHAFLALCREGPGT 1406
            +A   F   D+  +   +V  E   + F  F        PTL   E    R   F IAKI +   + MH R++Q+I+RRL+  K   P VG HW  +GFQG+DP TDL R+MG+L  LQ+LYL       AA I+  S   V  +P   VSIG TK A+  LR+G    E  +R SVM V++E +   FH F    R G  T
Sbjct:    5 EAAGFFAEVDVTPYLGQLVVEEEPSAGFFSFLIKMCFAPPTLT-DELMAERERAFAIAKIKFDESEPMHFRILQSIFRRLSGSKGEVPRVGSHWQDVGFQGVDPATDL-RAMGMLGPLQLLYLATFSSKSAARIYALSRDPVQEFPLAPVSIGLTKHALSALRKGHLSKEIKKRNSVMAVLNEFYLGCFHEFYLRWRNGGKT 204          
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Match: UPI00071CE762 (ELMO domain-containing protein 3 n=1 Tax=Calidris pugnax TaxID=198806 RepID=UPI00071CE762)

HSP 1 Score: 123 bits (308), Expect = 1.180e-27
Identity = 80/241 (33.20%), Postives = 127/241 (52.70%), Query Frame = 3
Query:  684 RAAEEWERIDQLQTAENSMPMEKGVSGALQPVSINEGDRTVCTADAMSHFRSQDLDEHKASIVPFEPRQSRFGL--FRRSPTLKFPEAEQLRNEVFLIAKILYTPMDIMHRRLIQTIYRRLTKEKRACPDVGPHWDTIGFQGIDPCTDLNRSMGVLSLLQVLYLL---ETQPAFAAVIFQYSTADVTGWPFLCVSIGFTKGAVDVLRQGACYAECNRRKSVMKVVHEIHQAQFHAFLALCR 1391
            RA EEWE ++++Q+      +    + A  P+S NE         A+ +F++ DL E +  +     RQ    L  F   P    P+ +  R     +A+      + +H R++QTIY++LT  K  CP  G HW+ +GFQG+DP TDL R  G+L L+Q+LY +   +T P  A  IF+ S  +   +PF  +S+  T+  +  LR+     ECNRR+ V+ V+++++ A   AFL L R
Sbjct:   45 RAQEEWEAVEEIQSG-----LGGASASASPPISFNE---------ALQYFQTADLSECRKKVQVTVRRQGLAALVHFLFGPPRLQPQLQGERELALAMAQCGLDDNERVHMRILQTIYKKLTCSKLGCPRYGAHWEELGFQGVDPGTDL-RGTGMLGLMQMLYFVMDAQTLP-LAQEIFKLSQHETQNFPFCIMSVNITRIVIQALREECLSRECNRRQQVIAVLNDLYAA---AFLQLYR 266          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig769.18121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS8_ECTSI5.160e-12471.08RNA binding motif and ELMO/CED-12 domain n=1 Tax=E... [more]
A0A836CIH2_9STRA7.460e-5644.92ELMO/CED-12 family-domain-containing protein n=1 T... [more]
A0A7S1TTY8_9STRA4.930e-3842.06Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1XMI1_9STRA8.210e-3156.67Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7M4FZF5_CROPO2.920e-2934.89ELMO domain containing 3 n=1 Tax=Crocodylus porosu... [more]
A0A6J0J3I9_9PASS1.110e-2832.11ELMO domain-containing protein 3 isoform X2 n=2 Ta... [more]
A0A7R5L0A8_9PASS2.390e-2832.11ELMO domain-containing protein 3 isoform X1 n=3 Ta... [more]
UPI001C66E3973.140e-2834.30ELMO domain-containing protein 3 isoform X1 n=2 Ta... [more]
A0A7S0R4F9_9CHLO9.440e-2838.61Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
UPI00071CE7621.180e-2733.20ELMO domain-containing protein 3 n=1 Tax=Calidris ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig769contigM-pyrifera_M_contig769:29564..32962 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRNA binding motif and ELMO/CED-12 domain
Ec32 orthologEc-19_002370.3
Exons8
Model size1436
Cds size723
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig769.18121.1prot_M-pyrifera_M_contig769.18121.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig769 29666..31318 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816668.285596-UTR-M-pyrifera_M_contig769:29563..296651622816668.285596-UTR-M-pyrifera_M_contig769:29563..29665Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig769 29564..29665 +
1692278108.4396527-UTR-M-pyrifera_M_contig769:29563..296651692278108.4396527-UTR-M-pyrifera_M_contig769:29563..29665Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig769 29564..29665 +
1622816668.35039-UTR-M-pyrifera_M_contig769:31318..313351622816668.35039-UTR-M-pyrifera_M_contig769:31318..31335Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig769 31319..31335 +
1692278108.4820492-UTR-M-pyrifera_M_contig769:31318..313351692278108.4820492-UTR-M-pyrifera_M_contig769:31318..31335Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig769 31319..31335 +
1622816668.360763-UTR-M-pyrifera_M_contig769:31586..317211622816668.360763-UTR-M-pyrifera_M_contig769:31586..31721Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig769 31587..31721 +
1692278108.4905844-UTR-M-pyrifera_M_contig769:31586..317211692278108.4905844-UTR-M-pyrifera_M_contig769:31586..31721Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig769 31587..31721 +
1622816668.3713424-UTR-M-pyrifera_M_contig769:32108..322881622816668.3713424-UTR-M-pyrifera_M_contig769:32108..32288Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig769 32109..32288 +
1692278108.5031323-UTR-M-pyrifera_M_contig769:32108..322881692278108.5031323-UTR-M-pyrifera_M_contig769:32108..32288Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig769 32109..32288 +
1622816668.3839855-UTR-M-pyrifera_M_contig769:32551..326621622816668.3839855-UTR-M-pyrifera_M_contig769:32551..32662Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig769 32552..32662 +
1692278108.5156753-UTR-M-pyrifera_M_contig769:32551..326621692278108.5156753-UTR-M-pyrifera_M_contig769:32551..32662Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig769 32552..32662 +
1622816668.39512-UTR-M-pyrifera_M_contig769:32794..329621622816668.39512-UTR-M-pyrifera_M_contig769:32794..32962Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig769 32795..32962 +
1692278108.5247364-UTR-M-pyrifera_M_contig769:32794..329621692278108.5247364-UTR-M-pyrifera_M_contig769:32794..32962Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig769 32795..32962 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816668.2983363-CDS-M-pyrifera_M_contig769:29665..297381622816668.2983363-CDS-M-pyrifera_M_contig769:29665..29738Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 29666..29738 +
1692278108.4488444-CDS-M-pyrifera_M_contig769:29665..297381692278108.4488444-CDS-M-pyrifera_M_contig769:29665..29738Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 29666..29738 +
1622816668.3110106-CDS-M-pyrifera_M_contig769:30134..303311622816668.3110106-CDS-M-pyrifera_M_contig769:30134..30331Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 30135..30331 +
1692278108.4568417-CDS-M-pyrifera_M_contig769:30134..303311692278108.4568417-CDS-M-pyrifera_M_contig769:30134..30331Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 30135..30331 +
1622816668.3231933-CDS-M-pyrifera_M_contig769:30631..309751622816668.3231933-CDS-M-pyrifera_M_contig769:30631..30975Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 30632..30975 +
1692278108.4652927-CDS-M-pyrifera_M_contig769:30631..309751692278108.4652927-CDS-M-pyrifera_M_contig769:30631..30975Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 30632..30975 +
1622816668.3364718-CDS-M-pyrifera_M_contig769:31209..313181622816668.3364718-CDS-M-pyrifera_M_contig769:31209..31318Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 31210..31318 +
1692278108.47361-CDS-M-pyrifera_M_contig769:31209..313181692278108.47361-CDS-M-pyrifera_M_contig769:31209..31318Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 31210..31318 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig769.18121.1

>prot_M-pyrifera_M_contig769.18121.1 ID=prot_M-pyrifera_M_contig769.18121.1|Name=mRNA_M-pyrifera_M_contig769.18121.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=241bp
MSAEFRDAAGVFGSGEQTPATSSSATKKDVARTAALSSSEDDSCNRRKPI
LSENRSVKHPDLGDVMQLDNAEALRQLTDIYKNGGSSSTQLVGIVAQSGP
VVDVAGAGQGESSNENRERVYMHAGGSVQRCPAIEEEEEGEEGEVEGEGE
DSGARGRGEKEELQHMKDPEQLQNPRQPEGQEEEGGGGKRVGIFALLKNG
NESTSYKRQKTLCQWRKVSAARCNRSASTRATAPSVRLMQ*
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mRNA from alignment at M-pyrifera_M_contig769:29564..32962+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig769.18121.1 ID=mRNA_M-pyrifera_M_contig769.18121.1|Name=mRNA_M-pyrifera_M_contig769.18121.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3399bp|location=Sequence derived from alignment at M-pyrifera_M_contig769:29564..32962+ (Macrocystis pyrifera P11B4 male)
TTCGGTATTGAGTACAGGCCATCGTCACATGATGGGCTGAAGCAGGGATA CGAAATTCCGTCGGGTCCTGCGTTCTACGATGAGGACGAGTTCGAAAAAG AGATGAGCGCCGAATTTAGGGATGCTGCGGGGGTATTCGGGAGTGGAGAA CAAACCCCCGCAACCAGCTCTTCTGGTATCGAGTCAGAGAGAACCGACGA AAAAAAACTCGTTCGTCCTCAACAAGAAGAGAATGTCAACGAGTTTGACG AGGGTGCAGTTTGCAGGTTTGGATCTCAGGCGAGTTGGTGGCGAGCACGC TGCTGTCTGGTTGTTGCTCATTAGCGCTCGTGTACGTTTCGTTGGGTCGA TGAATGTGGTGCGCAGGCATTATGCACTATTCGCTCCGTTTGTATTAGTG GCGATGAGTAGCAGCGCACCAAAAACGTCGGGCTACAGCAGCGCTACAGT AGCTCGACACACTTTATATGCACTTGCCTGGTATCTGGTGGTTGTTTGTT CGCACCCATCGGAGACAGTGACATTTGCGTTTCCACCCTATCGCAGTCTC CCAATCATCGCGCTGTCCGAGCGACTAAGAAGGATGTGGCGAGGACGGCA GCGTTGTCGAGCAGCGAGGATGACTCGTGCAATCGCAGAAAGCCAATTCT ATCAGAGAACAGGAGCGTGAAGCATCCTGATCTTGGCGATGTCATGCAAC TTGACAATGCAGAGGCACTCAGACAGCTCACGGATATATACAAAAACGGC GGATCGTCTAGTACGCAGGTAGGTGTGAGATGCATTATGTGGTGCATTTG TTTCCGCGGGATAAATAAGCGGTTTTTAGTAATATTGGCCTGTAACTCAA AGCCCAGATATGGAAGCACACGCGCATTAAAATATATACCATGTATATTG TTTCCTACCGCTTTCGATAATTGTATTTGAGTATAATGTGCTTCGCTATG ATGCATAGTGGGCAGTGTACAGCGCACGTTCAAACCTGGATGCGACTTAT CCTGAGCCGAACATGCTGTCGTTCTAACACTCCGGCGGCAACTACCGCAT CTGTTGGCCGGCCAGAAGCTTGTCGGCATTGTGGCACAATCGGGCCCTGT CGTCGATGTGGCTGGAGCAGGACAAGGCGAGAGTAGCAACGAGAACCGTG AGCGGGTATACATGCATGCCGGCGGGAGTGTCCAGCGGTGTCCTGCCATA GAGGAGGAGGAGGAGGGGGAGGAGGGAGAGGTGGAAGGCGAAGGAGAGGA TAGCGGTGCAAGGGGACGGGGGGAAAAAGAAGAGCTCCAACATATGAAAG ACCCAGAACAGCTACAAAATCCGCGTCAGCCAGAGGGACAAGAAGAGGAG GGGGGGGGGGGGAAGAGGGTAGGCATCTTCGCGCTGCTGAAGAATGGGAA CGAATCGACCAGGTAGGGTGCGGAGTCGTTTGTTTGTGTGCTACCTCTCT GTGCACGCCATATTCCTGTTACATGACGCTCGAAAATATTGTGCGCGTGT ATCTTCGGGACGTTGACAGCCCATATTGTACATACCCCCTCCTTCTGGTA TCCGTTGAACCAGAACGAGTCGGCACTATTGTCTTTACCTTGTTAATAAG GTGCTGAACCTTTTTTATATTCCTCCGTGATATCGTATCCTTTCAGTTAC AAACGGCAGAAAACTCTATGCCAATGGAGAAAGGTGTCAGCGGCGCGTTG CAACCGGTCAGCATCAACGAGGGCGACCGCACCGTCTGTACGGCTGATGC AATGAGCCATTTCCGTTCCCAAGTGAGTTCTCCACCCATCTTCGTTTCCA GAGAAACTCACGCTTGCTTGCGACCCGGTAATTTAAGGAGGTGTTTCATT TTTCGTTACGCCGCAGCTCAAAAGCTCACCGTGCAGCGATCCGCAGCCTA TTTTTTCATGCGAGACTGTAAGGTATAAGAGCGTTTGTATTTGTGCAATT TGTTGCGTCATGCTTGTTCAAAGATTAAAATAAAAATACACTACTGACAC AACCCAACTTTTCCGTTTGTCAGGATTTAGATGAACACAAGGCATCCATC GTCCCTTTCGAGCCTCGCCAGAGTCGATTCGGCCTATTCCGAAGATCCCC GACGCTTAAGTTCCCAGAAGCAGAGCAACTGCGGAACGAGGTGTTTCTCA TTGCAAAGGTATAGTACAACATCTGTCCGAAAGTTCGGTTTTTTTCCTCC CTATGTTTGCAGGCGCAAACGATGTTCCGAGAAGCAACATTGACTGAGGC TACACCTTAAAATGCTGCACGCTGGAGAGACTGTACATACTAGACAATTC AGACCTACAGTAGGTAAAAACACATTCTGGTGTACCTTCACGAGCCAGGA GGCAGTGGGGCTCTGAAAACCACTGTACACGGTTGCAGCATCGTTGGGGC GCTAGGACAGTAGACGTGCTGAACGCGTTGTTCGGTTTCCGAAGCACAAG TACACCTGCAAGCTTGCGATACTTGAGCAGATTACCGAGTTGTTTCAGCC TATCCAGCTCAAATCTACTCGACCGTGCACGTGCAACACACACAGATACT CTACACTCCGATGGACATCATGCATCGCCGGCTCATCCAGACAATATACC GGCGATTGACGAAGGAGAAGAGGGCGTGTCCCGACGTGGGCCCGCATTGG GACACGATCGGTTTCCAGGGAATCGACCCTTGCACAGATTTGAATCGCTC CATGGGAGTTTTATCATTGCTTCAGGTAGAGTCCAATCGTAACGTAAAGG CGCGAGCGTGATGCGTAGCCCCGACGGTTCCTTTGATGAACAGTGTGTGA GGAGTATGTATGCGACAAATGCCAGATGAGCTACCATCATGACAGTGCGT GGAGCCTTGTGCGTGGGGTCGAAACAGACGCGATGGAGCGTGCCGTCCCT CAGCACATTCCGAGGAAAACGGACTTCCACCACCATACCGGTATGTGACT TACAGCTAGTTGGGCTTCTTCACCCTTGCCTTCGACAGGTGCTTTATCTG CTGGAAACACAGCCAGCCTTCGCCGCAGTTATTTTCCAATACTCCACCGC AGACGTCACAGGGTGGCCATTTCTTTGCGTCAGCATCGGCTTCACGAAGG TACGAGAAGTTGGGCGAGCCTAACACCCTCGACGTGCTACATACAAGGTA TCAAGCTTAGAAATTGGAAGATGTGACCTACTGTTGCGGCCGCCCGGTGA CGTCCTCTTTGACCGTCCACCATCTACACAGGGGGCTGTGGATGTTTTGC GACAGGGTGCTTGCTATGCGGAGTGCAATCGCCGGAAGAGTGTGATGAAG GTGGTGCACGAGATCCATCAGGCACAGTTCCACGCGTTCCTGGCGCTTTG CCGAGAGGGACCAGGCACACACCATGCGCTGCACCTTGCTAAGGTGAGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig769:29564..32962+

>mRNA_M-pyrifera_M_contig769.18121.1 ID=mRNA_M-pyrifera_M_contig769.18121.1|Name=mRNA_M-pyrifera_M_contig769.18121.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1446bp|location=Sequence derived from alignment at M-pyrifera_M_contig769:29564..32962+ (Macrocystis pyrifera P11B4 male)
ATGAGCGCCGAATTTAGGGATGCTGCGGGGGTATTCGGGAGTGGAGAACA
AACCCCCGCAACCAGCTCTTCTGATGAGCGCCGAATTTAGGGATGCTGCG
GGGGTATTCGGGAGTGGAGAACAAACCCCCGCAACCAGCTCTTCTGCGAC
TAAGAAGGATGTGGCGAGGACGGCAGCGTTGTCGAGCAGCGAGGATGACT
CGTGCAATCGCAGAAAGCCAATTCTATCAGAGAACAGGAGCGTGAAGCAT
CCTGATCTTGGCGATGTCATGCAACTTGACAATGCAGAGGCACTCAGACA
GCTCACGGATATATACAAAAACGGCGGATCGTCTAGTACGCAGCGACTAA
GAAGGATGTGGCGAGGACGGCAGCGTTGTCGAGCAGCGAGGATGACTCGT
GCAATCGCAGAAAGCCAATTCTATCAGAGAACAGGAGCGTGAAGCATCCT
GATCTTGGCGATGTCATGCAACTTGACAATGCAGAGGCACTCAGACAGCT
CACGGATATATACAAAAACGGCGGATCGTCTAGTACGCAGCTTGTCGGCA
TTGTGGCACAATCGGGCCCTGTCGTCGATGTGGCTGGAGCAGGACAAGGC
GAGAGTAGCAACGAGAACCGTGAGCGGGTATACATGCATGCCGGCGGGAG
TGTCCAGCGGTGTCCTGCCATAGAGGAGGAGGAGGAGGGGGAGGAGGGAG
AGGTGGAAGGCGAAGGAGAGGATAGCGGTGCAAGGGGACGGGGGGAAAAA
GAAGAGCTCCAACATATGAAAGACCCAGAACAGCTACAAAATCCGCGTCA
GCCAGAGGGACAAGAAGAGGAGGGGGGGGGGGGGAAGAGGGTAGGCATCT
TCGCGCTGCTGAAGAATGGGAACGAATCGACCAGCTTGTCGGCATTGTGG
CACAATCGGGCCCTGTCGTCGATGTGGCTGGAGCAGGACAAGGCGAGAGT
AGCAACGAGAACCGTGAGCGGGTATACATGCATGCCGGCGGGAGTGTCCA
GCGGTGTCCTGCCATAGAGGAGGAGGAGGAGGGGGAGGAGGGAGAGGTGG
AAGGCGAAGGAGAGGATAGCGGTGCAAGGGGACGGGGGGAAAAAGAAGAG
CTCCAACATATGAAAGACCCAGAACAGCTACAAAATCCGCGTCAGCCAGA
GGGACAAGAAGAGGAGGGGGGGGGGGGGAAGAGGGTAGGCATCTTCGCGC
TGCTGAAGAATGGGAACGAATCGACCAGTTACAAACGGCAGAAAACTCTA
TGCCAATGGAGAAAGGTGTCAGCGGCGCGTTGCAACCGGTCAGCATCAAC
GAGGGCGACCGCACCGTCTGTACGGCTGATGCAATGATTACAAACGGCAG
AAAACTCTATGCCAATGGAGAAAGGTGTCAGCGGCGCGTTGCAACCGGTC
AGCATCAACGAGGGCGACCGCACCGTCTGTACGGCTGATGCAATGA
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