mRNA_M-pyrifera_M_contig769.18118.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig769.18118.1
Unique NamemRNA_M-pyrifera_M_contig769.18118.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig769.18118.1 vs. uniprot
Match: D7FYS4_ECTSI (40S ribosomal protein S14 n=3 Tax=Sar TaxID=2698737 RepID=D7FYS4_ECTSI)

HSP 1 Score: 289 bits (740), Expect = 5.460e-96
Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 3 
Query:   45 MADKKTKEEKVEERVTLGPVVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 497
            MADKKTKE+KVEERVTLGP VAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL
Sbjct:    1 MADKKTKEDKVEERVTLGPKVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 151
[Close]
BLAST of mRNA_M-pyrifera_M_contig769.18118.1 vs. uniprot
Match: K3YAJ9_SETIT (Uncharacterized protein n=7 Tax=Magnoliopsida TaxID=3398 RepID=K3YAJ9_SETIT)

HSP 1 Score: 258 bits (660), Expect = 7.540e-84
Identity = 133/148 (89.86%), Postives = 140/148 (94.59%), Query Frame = 3 
Query:   54 KKTKEEKVEERVTLGPVVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 497
            KKT+E K EE VTLGP V EGE VFGVAHIFASFNDTF+HITDLSGRETMVR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTP+PTD TRRKGGRRGRRL
Sbjct:    5 KKTREPK-EENVTLGPAVREGEYVFGVAHIFASFNDTFIHITDLSGRETMVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 151
[Close]
BLAST of mRNA_M-pyrifera_M_contig769.18118.1 vs. uniprot
Match: A0A1U8B504_NELNU (40S ribosomal protein S14-like n=10 Tax=Mesangiospermae TaxID=1437183 RepID=A0A1U8B504_NELNU)

HSP 1 Score: 258 bits (659), Expect = 1.030e-83
Identity = 131/151 (86.75%), Postives = 142/151 (94.04%), Query Frame = 3 
Query:   45 MADKKTKEEKVEERVTLGPVVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 497
            M+ +K +E K EE VTLGP V EGENVFGVAHIFASFNDTF+H+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMK+GRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    1 MSRRKVREPK-EENVTLGPTVREGENVFGVAHIFASFNDTFIHVTDLSGRETIVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKVGRIEDVTPIPTDSTRRKGGRRGRRL 150
[Close]
BLAST of mRNA_M-pyrifera_M_contig769.18118.1 vs. uniprot
Match: A0A8C4Q5K9_EPTBU (Ribosomal protein S14 n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4Q5K9_EPTBU)

HSP 1 Score: 258 bits (659), Expect = 1.070e-83
Identity = 129/151 (85.43%), Postives = 143/151 (94.70%), Query Frame = 3 
Query:   45 MADKKTKEEKVEERVTLGPVVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 497
            MA +K KE+K E+ ++LGP V EGENVFGVAHIFASFNDTFVH+TDLSG+ET+ RVTGGMKVKADRDE+SPYAAMLAAQDVAARCKELGITALH+++RATGGN+TKTPGPGAQSALRALAR+GMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    1 MAPRKGKEKKEEQMISLGPQVTEGENVFGVAHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHVRLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 151
[Close]
BLAST of mRNA_M-pyrifera_M_contig769.18118.1 vs. uniprot
Match: K3XZS1_SETIT (Uncharacterized protein n=20 Tax=Poaceae TaxID=4479 RepID=K3XZS1_SETIT)

HSP 1 Score: 257 bits (657), Expect = 2.080e-83
Identity = 131/151 (86.75%), Postives = 142/151 (94.04%), Query Frame = 3 
Query:   45 MADKKTKEEKVEERVTLGPVVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 497
            M+ +KT+E K EE VTLGP V EGE VFGVAHIFASFNDTF+H+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTP+PTD TRRKGGRRGRRL
Sbjct:    1 MSKRKTREPK-EENVTLGPTVREGEFVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 150
[Close]
BLAST of mRNA_M-pyrifera_M_contig769.18118.1 vs. uniprot
Match: D7LAN8_ARALL (40S ribosomal protein S14 n=2 Tax=Camelineae TaxID=980083 RepID=D7LAN8_ARALL)

HSP 1 Score: 257 bits (657), Expect = 2.080e-83
Identity = 130/151 (86.09%), Postives = 141/151 (93.38%), Query Frame = 3 
Query:   45 MADKKTKEEKVEERVTLGPVVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 497
            M+ +KTKE KV E VTLGP V EGE VFGV HIFASFNDTF+H+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITA+H+K+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    1 MSKRKTKEPKV-ENVTLGPAVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITAIHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 150
[Close]
BLAST of mRNA_M-pyrifera_M_contig769.18118.1 vs. uniprot
Match: W1PY91_AMBTC (Uncharacterized protein n=8 Tax=Magnoliopsida TaxID=3398 RepID=W1PY91_AMBTC)

HSP 1 Score: 257 bits (657), Expect = 2.150e-83
Identity = 131/148 (88.51%), Postives = 141/148 (95.27%), Query Frame = 3 
Query:   54 KKTKEEKVEERVTLGPVVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 497
            KKT+E K EE VTLGP V EGE+VFGVAH+FASFNDTFVH+TDLSGRET+VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GM+IGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:    5 KKTREPK-EENVTLGPTVREGEHVFGVAHVFASFNDTFVHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMRIGRIEDVTPIPTDSTRRKGGRRGRRL 151
[Close]
BLAST of mRNA_M-pyrifera_M_contig769.18118.1 vs. uniprot
Match: M1XK24_9METZ (40S ribosomal protein S14 n=1 Tax=Sycon ciliatum TaxID=27933 RepID=M1XK24_9METZ)

HSP 1 Score: 257 bits (657), Expect = 2.380e-83
Identity = 131/154 (85.06%), Postives = 140/154 (90.91%), Query Frame = 3 
Query:   36 ISSMADKKTKEEKVEERVTLGPVVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 497
            +S    +K KE K EE + LGP V EGENVFGVAHIFASFNDTFVHITDLSG+ET+ RVTGGMKVKADRDEASPYAAMLAAQDVA RCKE+GITALHIK+RATGGN+TKTPGPGAQSALRALARAGMKIGRIEDVTPIP+D TRRKGGRRGRRL
Sbjct:    1 MSKSTKRKGKEAKKEENIVLGPQVGEGENVFGVAHIFASFNDTFVHITDLSGKETITRVTGGMKVKADRDEASPYAAMLAAQDVAVRCKEVGITALHIKLRATGGNRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 154
[Close]
BLAST of mRNA_M-pyrifera_M_contig769.18118.1 vs. uniprot
Match: A0A4W6E5W7_LATCA (Ribosomal protein S14 n=1 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6E5W7_LATCA)

HSP 1 Score: 258 bits (659), Expect = 2.580e-83
Identity = 130/155 (83.87%), Postives = 145/155 (93.55%), Query Frame = 3 
Query:   33 LISSMADKKTKEEKVEERVTLGPVVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 497
            L+ +MA +K KE+K E+ ++LGP VAEGENVFGV HIFASFNDTFVH+TDLSG+ET+ RVTGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGN+TKTPGPGAQSALRALAR+GMKIGRIEDVTPIP+D TRRKGGRRGRRL
Sbjct:   23 LMQTMAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 177
[Close]
BLAST of mRNA_M-pyrifera_M_contig769.18118.1 vs. uniprot
Match: G3QCM9_GASAC (Ribosomal protein S14 n=5 Tax=Euteleostomi TaxID=117571 RepID=G3QCM9_GASAC)

HSP 1 Score: 257 bits (657), Expect = 2.630e-83
Identity = 130/153 (84.97%), Postives = 144/153 (94.12%), Query Frame = 3 
Query:   39 SSMADKKTKEEKVEERVTLGPVVAEGENVFGVAHIFASFNDTFVHITDLSGRETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 497
            S+MA +K KE+K E+ ++LGP VAEGENVFGV HIFASFNDTFVH+TDLSG+ET+ RVTGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGN+TKTPGPGAQSALRALAR+GMKIGRIEDVTPIP+D TRRKGGRRGRRL
Sbjct:    5 SNMAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 157
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig769.18118.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS4_ECTSI5.460e-9698.6840S ribosomal protein S14 n=3 Tax=Sar TaxID=269873... [more]
K3YAJ9_SETIT7.540e-8489.86Uncharacterized protein n=7 Tax=Magnoliopsida TaxI... [more]
A0A1U8B504_NELNU1.030e-8386.7540S ribosomal protein S14-like n=10 Tax=Mesangiosp... [more]
A0A8C4Q5K9_EPTBU1.070e-8385.43Ribosomal protein S14 n=1 Tax=Eptatretus burgeri T... [more]
K3XZS1_SETIT2.080e-8386.75Uncharacterized protein n=20 Tax=Poaceae TaxID=447... [more]
D7LAN8_ARALL2.080e-8386.0940S ribosomal protein S14 n=2 Tax=Camelineae TaxID... [more]
W1PY91_AMBTC2.150e-8388.51Uncharacterized protein n=8 Tax=Magnoliopsida TaxI... [more]
M1XK24_9METZ2.380e-8385.0640S ribosomal protein S14 n=1 Tax=Sycon ciliatum T... [more]
A0A4W6E5W7_LATCA2.580e-8383.87Ribosomal protein S14 n=1 Tax=Lates calcarifer Tax... [more]
G3QCM9_GASAC2.630e-8384.97Ribosomal protein S14 n=5 Tax=Euteleostomi TaxID=1... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig769contigM-pyrifera_M_contig769:1380..6138 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score290.0
Seed ortholog evalue6.2e-76
Seed eggNOG ortholog2880.D7FYS4
Preferred nameRPS14
KEGG rclassRC00002,RC02753
KEGG koko:K01000,ko:K02955
KEGG TC9.B.146
KEGG ReactionR05629,R05630
KEGG Pathwayko00550,ko01100,ko01502,ko03010,map00550,map01100,map01502,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000028,GO:0000122,GO:0000184,GO:0000462,GO:0000956,GO:0002181,GO:0002262,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006139,GO:0006355,GO:0006357,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006417,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015031,GO:0015833,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030490,GO:0030684,GO:0030686,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032040,GO:0032268,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034101,GO:0034248,GO:0034470,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0042592,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045182,GO:0045184,GO:0045892,GO:0045934,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051252,GO:0051253,GO:0051641,GO:0051649,GO:0055044,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070181,GO:0070727,GO:0070925,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0098588,GO:0098805,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.mRNA 5'-UTR binding
EggNOG OGsCOG0100@1,KOG0407@2759
Ec32 ortholog descriptionRibosomal protein S11
Ec32 orthologEc-19_002330.1
EC2.7.8.13
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01011,ko03011
Exons5
Model size963
Cds size456
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816668.435067-UTR-M-pyrifera_M_contig769:1379..18421622816668.435067-UTR-M-pyrifera_M_contig769:1379..1842Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig769 1380..1842 -
1692278108.535535-UTR-M-pyrifera_M_contig769:1379..18421692278108.535535-UTR-M-pyrifera_M_contig769:1379..1842Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig769 1380..1842 -
1622816668.522585-UTR-M-pyrifera_M_contig769:6094..61381622816668.522585-UTR-M-pyrifera_M_contig769:6094..6138Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig769 6095..6138 -
1692278108.6153052-UTR-M-pyrifera_M_contig769:6094..61381692278108.6153052-UTR-M-pyrifera_M_contig769:6094..6138Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig769 6095..6138 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816668.453069-CDS-M-pyrifera_M_contig769:1842..19231622816668.453069-CDS-M-pyrifera_M_contig769:1842..1923Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 1843..1923 -
1692278108.557055-CDS-M-pyrifera_M_contig769:1842..19231692278108.557055-CDS-M-pyrifera_M_contig769:1842..1923Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 1843..1923 -
1622816668.4679172-CDS-M-pyrifera_M_contig769:2536..26531622816668.4679172-CDS-M-pyrifera_M_contig769:2536..2653Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 2537..2653 -
1692278108.568201-CDS-M-pyrifera_M_contig769:2536..26531692278108.568201-CDS-M-pyrifera_M_contig769:2536..2653Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 2537..2653 -
1622816668.4829519-CDS-M-pyrifera_M_contig769:3424..35561622816668.4829519-CDS-M-pyrifera_M_contig769:3424..3556Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 3425..3556 -
1692278108.5788484-CDS-M-pyrifera_M_contig769:3424..35561692278108.5788484-CDS-M-pyrifera_M_contig769:3424..3556Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 3425..3556 -
1622816668.4977918-CDS-M-pyrifera_M_contig769:4305..44281622816668.4977918-CDS-M-pyrifera_M_contig769:4305..4428Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 4306..4428 -
1692278108.5983737-CDS-M-pyrifera_M_contig769:4305..44281692278108.5983737-CDS-M-pyrifera_M_contig769:4305..4428Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 4306..4428 -
1622816668.5106945-CDS-M-pyrifera_M_contig769:6091..60941622816668.5106945-CDS-M-pyrifera_M_contig769:6091..6094Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 6092..6094 -
1692278108.6073751-CDS-M-pyrifera_M_contig769:6091..60941692278108.6073751-CDS-M-pyrifera_M_contig769:6091..6094Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig769 6092..6094 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig769.18118.1prot_M-pyrifera_M_contig769.18118.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig769 1843..6094 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig769.18118.1

>prot_M-pyrifera_M_contig769.18118.1 ID=prot_M-pyrifera_M_contig769.18118.1|Name=mRNA_M-pyrifera_M_contig769.18118.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp
MADKKTKEEKVEERVTLGPVVAEGENVFGVAHIFASFNDTFVHITDLSGR
ETMVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRAT
GGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRR
L*
back to top

mRNA from alignment at M-pyrifera_M_contig769:1380..6138-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig769.18118.1 ID=mRNA_M-pyrifera_M_contig769.18118.1|Name=mRNA_M-pyrifera_M_contig769.18118.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4759bp|location=Sequence derived from alignment at M-pyrifera_M_contig769:1380..6138- (Macrocystis pyrifera P11B4 male)
GGTTGGCTCATCGTCTTCGGCAGGCGCCATAGCTCATATCAAGCATGGTG
AGTGTCTCTCTATGCCTTCCTAATTCCTTATAGGTGTCGTGTAGAACCCA
GCAACGCGGCGTGTCGCCTCTCGACCGGAGCTTTCGGGGCGCAGGCAATC
TGGGCCAGCGATCAGCTGCACCGCCGGTGGAGGGGGAGCTACAGGGCATG
TATAGTTGCTTGATAAGCTCATCGATCGCAGGGCACAGCACCCACAGGAT
TGTAGGAAGGCCCCAGCGATTGTGGCAAGCTTGCTGTGTGGTTCTACGAC
CGAGGTGTAAAGGGAGTAAGAGTCTCGGTCTTGTAAAAAGTGCCCCGACC
TAGCTAAAGTACCCACGTTCCGGAAAAAGCGTGGTATGGCACCCACACGG
CTACGATAGCACCCTCAGCGTAGGAGACGAAACTGTGTGGCGTTGGTTTG
TGTCAGAGAATGGGTGACAGCGCCAGCGCCACGAGCAGCACTTTCTGACT
TAAAAGCATAGGCAAGATTCTCAATTGTGTTTGGTCAAATACGTGGGGTG
ATGTTGTCGAAGTGTTGGGTCCTCGTGCTGCTATACCGTTCTGGTCGTGT
TAGTACGGCCAGACGGAGAAGTCTAAAAATGCTGTTGTTAATAATACGAG
GCGTCATCGTCGTTCAACTCGGTTCCTGTCCTATTTTGGGCGTCTTTGGT
TCGGTATGAGGACGCTGAGATCAGAGAAGCGAGAAGCGTGCACCATCATG
CTCTATATCGGGGTATACACACCTTTGTGATGCGAGGTGAAGAGACAAGA
AATAGCTATCTACTGGTATTCTGTAGTCGTTGCCGACAGCAGTCAGACCG
CCTTGGGTAATAGCAATGCTACGCTCCACGGCAGGTCGTATCAACTTGAT
CTCTATGGTTTCGTTTGCCGACTAGGGTTCGGTTAACCCCCACGTTACCA
TGTTACCTGTGGTACCTGGTACGATCTACATTCGCGAGGTCGAGTGACAC
TGAGGTTGGCGATTGATTTTAGCCAACTTGCTGGCAACACCGTTCGTTGC
CTGTGATTTCGGTTTGCTTCTACGAGTACGGGTACTTTGTCAAAGAGTTT
GTGCACGCGGCACGTAGGGTGATTTTGAGCAAAGCGTCTTGCCAGGCACC
TTTACTTGGTACCGGGTATGGTTGAGTATACCGGTATAGCAGTATTTGTT
GCGAGCGGTATCATGCCTACACCCATGCTAGGGGTGTACAGCAGGGGTCA
CCTGAAACCTTGAAAGTCAAGCTACAGCATTTCCTCTGGCTCTTGGCGTT
CTTTTGCAGGTATGCGCGTATTTCTATCTCTAGTTTTTCGTTTTGATAGA
TGTGGCGGAGGGAACACGGTCTACAGCAGTATAATAGGATCAACACCGTT
TCGGGGTATACACAAGTAGTGGTGGATTGTTTTGCCATGTCCGCGTGAAA
CTAACATGCGGTTTTCTAACCTCGTTCGGCTGTTGCGACAAGAGCTTTAT
CGGCGGGGGCTCTTTTAGCAGTCCCAGGTTATCAATCAAAACTATCAATG
GAAGAAAAGAAGGGAAATATATTTTTCGTCGAAGATGCAACTAACCAAGC
CACCACCCCCCCTCCCCCTGACGATATCTCCAGCCGCACCCCAATCCGCG
TTTTGCCTGTTATCCGGCACGTCTTGCTGACGAACGAACTCTTGATGGCC
TGATGTGCAGGCGGACAAGAAGACTAAGGAGGAGAAGGTCGAGGAGAGGG
TCACTCTTGGCCCCGTGGTGGCGGAGGGGGAGAATGTGTTCGGCGTCGCG
CACATCTTCGCCTCGTTCAACGACACATTCGTCGTGAGTATTTGCAGCGT
TGTCATGCCTGGTACATTTGTGGTGGATAAACAGTACTGCTGTTCTACTG
TAGCTCAAGCGGAGAACCTGACGGAGGGGTCAAAACAACCCATCCTTTGC
CTCACATTTGCTTCACTGCTTTGGTATTTCTTGAGAAGCAAGAAAAATTA
AGTCGTACATAGCACGTTTTTCCAGGCTTTGGGAAAGGGTGATCGCAGTA
CCGGAGACGTCGTGTACTTCCTCCTGCATTGGAGTTCTGTTGGGAAGCAA
TCAAGTATGTAACACGTTTTTTAGACATGACGTAAATTGTGGTTGCAGCA
TTGAAGCAGTTGTGTATGTGCTGTGTACTCGCATGTATCGACAGGCTGGT
GGTCTTGTCATGCCAGTCCGTCGGACTTTCACGCATTAGTTACGGGTAGC
AAAGCTGGCCGAAGAGTGGAATCCCTACGGCTGTGCCGCCGATAGGATGT
ATCCGATGTTTGATGTGCTTTTGGGAGGCAGAAAACGCGTGTCTTTGGTT
CGTTCGATTGACAAACCTCATGGCGAGTTCATTTGTTTTAGTTTAGGAGC
TCCAAACATAAATATCTGGCCTTTGTCTCCAACGGCAGGCAATGTTGGCA
AAACGACGCGCGAAAGCTTTGATCCTGGATAACCAATTTTCTCCTAGAGC
GTTTGATTGTCAGCCAACTCATTTTTTGACACCCCTAATCCCGTTAATTC
CGCCTGTCTCATCGCCTAATTCTTGAGTACAGCACATCACCGACCTTTCC
GGGAGGGAGACCATGGTCCGCGTGACCGGCGGCATGAAGGTCAAGGCTGA
CCGCGATGAAGCGTCGCCCTACGCGGCTATGCTTGCCGCCCAGGACGTTG
CTGCCCGCTGCAAGGTAAGCGAGAGAAAGGCTTCGAGACTTCGCGTGAGT
GGGTATCGTATGCCCGCCTCTGCTCCATCCGTTATACGTGCTGTGTATTT
GCGAGCGTTGGTTGTTACCTTGTACTCTCGGCATGGCTAAAAATTAATAG
TTTTGCGTGTTTCGCCTGCAACGCACGTGCACAGCGACATGAGCTCTCGA
TGACTCCGCATGCTCTTTCCCGTCGAAGCCATGTGGCAGTTTCGCGAAAG
AAGCAGGCAGCTGGTGGAGCATTCAACCATCGATGGCTGCAGCGACCTCG
CTTATGCCTCGCACACCCGCGTGTTCAGGGCGTACCGTGCAGCTGCTGCT
GTTTATTACGCATGGATACAACTGGGACATCCACGACGGCTATTCCGATT
GGCGAACGTCCCCGAGACTGTTGGCGGTCACGCTTAATGCTATATTTGGT
CGGACGTGTCAAATACAACCATTTGCATTCGTGTGCAGAGGAAAGGTTGT
GATGATCCGGCCAAAAAGTTAGTTCCAGAGTACTTGCTGAAGTCGTACAA
TACTTAGGAGTGCAGATGTGACGGTTTTTTCACATATTGTGTGTACCCTG
TGATGCGCTCCGACCGAGTGCAGCGTTCGCGGAGCGTGACGCATAGCACG
TATAGCCCAATGTCCTCACCTGATCCGTCCCTCAGAGAAAGGCACCCCAC
GCTCGAGTTGCACGGTCATTTACTGTACAAGACAGAGCTAAACCTATACT
ATGTTACTTGACCCGCTTTATACTTGGCACTTCAGGAGCTAGGCATCACC
GCCCTGCACATCAAGATGCGTGCCACCGGCGGAAACAAGACGAAGACCCC
TGGCCCCGGCGCACAGTCCGCCCTGCGCGCCCTCGCTCGCGCGGGCATGA
AGGTGATTTATACTTGGTGTCAATGGTTGCCTCGCATCGTGTACTTGCTT
GTTGTCTGCCGGAGATGAAAGTAATTAGATAATCAATAGGTTCCCAGGGC
GTTCGTTCTTGGCTTGTTGTGCGCGTCATGCGTCATCACGTACCAGGCAT
ATAGCTGTACGCGTGCGGCTATTGGTGTTATTTTGTCTTGCCGTTCTTGT
ATTTTACACTTTTAGATGGTAGTATTCAGACCAGTTCTATTTTTTGGTGC
TTTGAAGCAGACGTGCAGACATATCACGCTGGACTTGCCCCAAGCCAGCG
GGAACAAGTAATGTCCAGCTTATGGAGGTGGCGAGTTTAAAGTATCAAAG
ACGGGGGACGAAATGAACAACACAAACAACTTGGACGTTTTCGTTATTTG
TTTTGGCTTGTTTGTTTTGAGAACCGTTCAAAAATATCATGAAGAGGAGG
GGACAGACAGAGCAAGACACACGCTGGTTGGTTTTCAGTTGTGTGCTGCA
AGAACCCTGCAACAAACAGACCCACGCCTTATTACTGACACCAAAAACCC
CCCACTGTCCCTTCCGTGGCTCCCCTGTCCTCTCTACCTGCCGGCGCTTT
TCGTTTCCAATTCAGATCGGCCGCATCGAAGACGTCACCCCGATCCCCAC
TGACTGCACCCGCCGGAAGGGTGGCCGCCGTGGTCGCCGTCTCTAAGACG
TTGCATCGCCACGACAGCAACCGTATACGTTCCTGACCTCTCCAAAACCT
TTTTTCTGCCACGGACTACTTTGCCTTTTTCGCGTGTGCGCTGCTGGTGC
TGTGGGGCTTGCTGCTTGCATGCAGCATAACAGTCGGCCACGTTATGCGG
ATGAAAGTGTTCTGTTGCGTGTTTTGGCAAGTGTCTGCGGCGGGCCCTCG
GTGATTGACATCCATGAGCCACCCGGCAGCCTCGAGCAAAACTGATAAAA
AATAATGATGGGTCGCCAACCGAGACATGATTTTGTTTTTGTGCCAAGCT
GAAACAAGGCTTGGGTTCTTGGGTTCATGAGAGCGCTTGATCATGCTCCT
CCAAGGGTATTTTTGTCTTTTTGAAGTGGAGCAGGGTCCCGTACCGTGCG
ATCTGGGCTTCCACTTGGACATCGCACCTGACACAACAACCCCTTGTTTC
GATGTTGCC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig769:1380..6138-

>mRNA_M-pyrifera_M_contig769.18118.1 ID=mRNA_M-pyrifera_M_contig769.18118.1|Name=mRNA_M-pyrifera_M_contig769.18118.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=912bp|location=Sequence derived from alignment at M-pyrifera_M_contig769:1380..6138- (Macrocystis pyrifera P11B4 male)
ATGATGGCGGACAAGAAGACTAAGGAGGAGAAGGTCGAGGAGAGGGTCAC
TCTTGGCCCCGTGGTGGCGGAGGGGGAGAATGTGTTCGGCGTCGCGCACA
TCTTCGCCTCGTTCAACGACACATTCGTCGCGGACAAGAAGACTAAGGAG
GAGAAGGTCGAGGAGAGGGTCACTCTTGGCCCCGTGGTGGCGGAGGGGGA
GAATGTGTTCGGCGTCGCGCACATCTTCGCCTCGTTCAACGACACATTCG
TCCACATCACCGACCTTTCCGGGAGGGAGACCATGGTCCGCGTGACCGGC
GGCATGAAGGTCAAGGCTGACCGCGATGAAGCGTCGCCCTACGCGGCTAT
GCTTGCCGCCCAGGACGTTGCTGCCCGCTGCAAGCACATCACCGACCTTT
CCGGGAGGGAGACCATGGTCCGCGTGACCGGCGGCATGAAGGTCAAGGCT
GACCGCGATGAAGCGTCGCCCTACGCGGCTATGCTTGCCGCCCAGGACGT
TGCTGCCCGCTGCAAGGAGCTAGGCATCACCGCCCTGCACATCAAGATGC
GTGCCACCGGCGGAAACAAGACGAAGACCCCTGGCCCCGGCGCACAGTCC
GCCCTGCGCGCCCTCGCTCGCGCGGGCATGAAGGAGCTAGGCATCACCGC
CCTGCACATCAAGATGCGTGCCACCGGCGGAAACAAGACGAAGACCCCTG
GCCCCGGCGCACAGTCCGCCCTGCGCGCCCTCGCTCGCGCGGGCATGAAG
ATCGGCCGCATCGAAGACGTCACCCCGATCCCCACTGACTGCACCCGCCG
GAAGGGTGGCCGCCGTGGTCGCCGTCTCTAAATCGGCCGCATCGAAGACG
TCACCCCGATCCCCACTGACTGCACCCGCCGGAAGGGTGGCCGCCGTGGT
CGCCGTCTCTAA
back to top