mRNA_M-pyrifera_M_contig76897.18116.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig76897.18116.1 vs. uniprot
Match: A0A1X7UZK0_AMPQE (AA_permease_C domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UZK0_AMPQE) HSP 1 Score: 80.5 bits (197), Expect = 1.230e-16 Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 10 GALAVLSLLPFALLHRFPTPPENLPSTFQCPLVPTIPLLAIAINLTMLAGLKADAWFRLAIWTAIGIALYLLYGIRYSILRSIQPE 267 G +A L + + + N P+TF+CPL+P IP L IAIN+ MLAGLK+ AW RL IW AIGI +Y+ YGI S +R P+ Sbjct: 55 GGVAFLLFIALCFMKTY-----NTPTTFKCPLLPLIPCLGIAINMYMLAGLKSAAWIRLGIWLAIGILIYVFYGIWNSKMRDYVPK 135
BLAST of mRNA_M-pyrifera_M_contig76897.18116.1 vs. uniprot
Match: A0A812VIK8_9DINO (Slc7a2 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812VIK8_9DINO) HSP 1 Score: 83.6 bits (205), Expect = 2.260e-16 Identity = 41/80 (51.25%), Postives = 52/80 (65.00%), Query Frame = 1 Query: 13 ALAVLSLLPFALLHRFPTPPENLPSTFQCPLVPTIPLLAIAINLTMLAGLKADAWFRLAIWTAIGIALYLLYGIRYSILR 252 ALAV +L L + PP N+P TFQCP VP +P L IA+NL M+AGL AW RL WT +G+ +Y LY +R+S LR Sbjct: 489 ALAVAALA-LCLYMWWAFPPVNVPPTFQCPAVPFVPCLGIAVNLVMMAGLDPSAWLRLGAWTLVGLVIYFLYSVRFSKLR 567
BLAST of mRNA_M-pyrifera_M_contig76897.18116.1 vs. uniprot
Match: UPI0005C33C44 (uncharacterized protein LOC100636953 n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI0005C33C44) HSP 1 Score: 81.6 bits (200), Expect = 1.050e-15 Identity = 42/86 (48.84%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 10 GALAVLSLLPFALLHRFPTPPENLPSTFQCPLVPTIPLLAIAINLTMLAGLKADAWFRLAIWTAIGIALYLLYGIRYSILRSIQPE 267 G +A L + + + N P+TF+CPLVP IP L IAIN+ MLAGLK+ AW RL IW AIGI +Y+ YGI S +R P+ Sbjct: 465 GGVAFLFFIALCFMKTY-----NTPTTFKCPLVPLIPCLGIAINMYMLAGLKSAAWIRLGIWLAIGILIYVFYGIWNSKMRDYVPK 545
BLAST of mRNA_M-pyrifera_M_contig76897.18116.1 vs. uniprot
Match: A0A1X7UZ20_AMPQE (AA_permease_C domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UZ20_AMPQE) HSP 1 Score: 80.9 bits (198), Expect = 2.060e-15 Identity = 42/85 (49.41%), Postives = 53/85 (62.35%), Query Frame = 1 Query: 10 GALAVLSLLPFALLHRFPTPPENLPSTFQCPLVPTIPLLAIAINLTMLAGLKADAWFRLAIWTAIGIALYLLYGIRYSILRSIQP 264 G +A L + + + N P+TF+CPLVP IP L IAIN+ MLAGLK+ AW RL IW AIGI +Y+ YGI S +R P Sbjct: 465 GGVAFLFFIALCFMKTY-----NTPTTFKCPLVPLIPCLGIAINMYMLAGLKSAAWIRLGIWLAIGILIYVFYGIWNSKMRDYIP 544
BLAST of mRNA_M-pyrifera_M_contig76897.18116.1 vs. uniprot
Match: L8GUL6_ACACA (AA_permease_C domain-containing protein (Fragment) n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GUL6_ACACA) HSP 1 Score: 70.5 bits (171), Expect = 3.820e-13 Identity = 30/59 (50.85%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 76 NLPSTFQCPLVPTIPLLAIAINLTMLAGLKADAWFRLAIWTAIGIALYLLYGIRYSILR 252 NLP+TF CPLVP IP + + +N+ ++ L +A++R+ +WTAIG+A+Y YGIR S LR Sbjct: 3 NLPTTFSCPLVPLIPSVGVLVNIYLITSLPIEAFYRVLVWTAIGLAIYFGYGIRNSALR 61
BLAST of mRNA_M-pyrifera_M_contig76897.18116.1 vs. uniprot
Match: A0A4Y2AA19_ARAVE (Cationic amino acid transporter 4 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2AA19_ARAVE) HSP 1 Score: 71.6 bits (174), Expect = 3.420e-12 Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 1 WAVGALAVL-----SLLPFALLHRFPTPPENLPSTFQCPLVPTIPLLAIAINLTMLAGLKADAWFRLAIWTAIGIALYLLYGIRYS 243 WAV +AVL S L+H+ N P ++ PLVP IP L++++N+ ++ LK+ W R+AIW A+G+ +YL YG+R+S Sbjct: 515 WAVALIAVLLICVISSFVLILMHK----QSNAPLKYKVPLVPLIPALSVSVNIILIVSLKSATWIRMAIWVAVGLIIYLFYGMRHS 596
BLAST of mRNA_M-pyrifera_M_contig76897.18116.1 vs. uniprot
Match: L8GST8_ACACA (Cationic amino acid transporter, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GST8_ACACA) HSP 1 Score: 70.5 bits (171), Expect = 8.170e-12 Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 1 Query: 1 WAVGALAVLSLLPFALLHRFPTPPENLPSTFQCPLVPTIPLLAIAINLTMLAGLKADAWFRLAIWTAIGIALYLLYGIRYSILRSIQPEDNK 276 ++ +L++LP A + F T +P TF+CPLVP P+L I N+ ++A L A W+RL W A+G+ +YL YGIR S L Q E N+ Sbjct: 354 YSAAIFGLLAVLPIA--YFFKTTQTFVPETFKCPLVPLTPILGILSNIYLMANLTAATWWRLFGWLALGLCIYLGYGIRNSRLAKRQNEYNE 443
BLAST of mRNA_M-pyrifera_M_contig76897.18116.1 vs. uniprot
Match: L8GV49_ACACA (Amino acid permease n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GV49_ACACA) HSP 1 Score: 70.5 bits (171), Expect = 8.680e-12 Identity = 30/59 (50.85%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 76 NLPSTFQCPLVPTIPLLAIAINLTMLAGLKADAWFRLAIWTAIGIALYLLYGIRYSILR 252 NLP+TF CPLVP IP + + +N+ ++ L +A++R+ +WTAIG+A+Y YGIR S LR Sbjct: 479 NLPTTFSCPLVPLIPSVGVLVNIYLITSLPIEAFYRVLVWTAIGLAIYFGYGIRNSALR 537
BLAST of mRNA_M-pyrifera_M_contig76897.18116.1 vs. uniprot
Match: H2U7X1_TAKRU (AA_permease_C domain-containing protein n=2 Tax=Takifugu rubripes TaxID=31033 RepID=H2U7X1_TAKRU) HSP 1 Score: 69.7 bits (169), Expect = 1.610e-11 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 1 WAVGALAVLS---LLPFALLHRFPTPPENLPSTFQCPLVPTIPLLAIAINLTMLAGLKADAWFRLAIWTAIGIALYLLYGIRYSILRS 255 W+V + +L L+ AL+ R P +TF PLVP +P+L+I IN ++ L D W R AIW A+G+A+Y +YGIR+S R+ Sbjct: 490 WSVALVCILGTIVLINTALIFR--QPQNGTKATFMMPLVPFLPILSIFINSYLMVQLGPDTWIRYAIWMAVGLAIYFIYGIRFSTQRT 575
BLAST of mRNA_M-pyrifera_M_contig76897.18116.1 vs. uniprot
Match: A0A2P5NSV4_9HYPH (Amino acid permease n=1 Tax=Methylocystis sp. TaxID=1911079 RepID=A0A2P5NSV4_9HYPH) HSP 1 Score: 69.3 bits (168), Expect = 2.130e-11 Identity = 34/80 (42.50%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 4 AVGALAVLSLLPFALLHRFPTPPENLPSTFQCPLVPTIPLLAIAINLTMLAGLKADAWFRLAIWTAIGIALYLLYGIRYS 243 ++G LA SL+ A++H + P NL F+ P +P IP+L I L ++ L D W RL IWT IG+A+YL YGI+++ Sbjct: 401 SIGTLAAFSLVCIAVIHLRKSHP-NLHRPFRAPGIPVIPILGIVSCLALMIALPLDTWLRLVIWTGIGLAIYLFYGIKHA 479 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76897.18116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig76897.18116.1 >prot_M-pyrifera_M_contig76897.18116.1 ID=prot_M-pyrifera_M_contig76897.18116.1|Name=mRNA_M-pyrifera_M_contig76897.18116.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp WAVGALAVLSLLPFALLHRFPTPPENLPSTFQCPLVPTIPLLAIAINLTMback to top mRNA from alignment at M-pyrifera_M_contig76897:635..982- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig76897.18116.1 ID=mRNA_M-pyrifera_M_contig76897.18116.1|Name=mRNA_M-pyrifera_M_contig76897.18116.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=348bp|location=Sequence derived from alignment at M-pyrifera_M_contig76897:635..982- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig76897:635..982- >mRNA_M-pyrifera_M_contig76897.18116.1 ID=mRNA_M-pyrifera_M_contig76897.18116.1|Name=mRNA_M-pyrifera_M_contig76897.18116.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig76897:635..982- (Macrocystis pyrifera P11B4 male)back to top |