mRNA_M-pyrifera_M_contig76891.18113.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig76891.18113.1 vs. uniprot
Match: A0A5A8DS19_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DS19_CAFRO) HSP 1 Score: 176 bits (445), Expect = 6.360e-53 Identity = 80/112 (71.43%), Postives = 90/112 (80.36%), Query Frame = 1 Query: 7 RTVVGDAEALPFADNAFDTVVDTFGLCSMDSPVSALREMRRVCKPDGKILLLEHGRGTWDIVNYLLDRNAQKHADKFGCWYNRDIPALIAASGLRVVSRTRWHFGTTLVYEC 342 R V AEALP D FDTV DTFGLCSMD PV AL EM+RVCKP GKILLLEHG GTW+ +N LL+R+A KH K+GCWYNRD+ A++ ASGLRVVSR+RWHFGTT VYEC Sbjct: 136 RVVKASAEALPLDDGEFDTVADTFGLCSMDDPVGALLEMQRVCKPGGKILLLEHGIGTWEFINGLLERSAPKHFAKWGCWYNRDVDAIVKASGLRVVSRSRWHFGTTYVYEC 247
BLAST of mRNA_M-pyrifera_M_contig76891.18113.1 vs. uniprot
Match: A0A7R9UFL9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFL9_9STRA) HSP 1 Score: 140 bits (354), Expect = 2.410e-40 Identity = 63/104 (60.58%), Postives = 84/104 (80.77%), Query Frame = 1 Query: 16 VGDAEALPFADNAFDTVVDTFGLCSMDSPVSALREMRRVCKPDGKILLLEHGRGTWDIVNYLLDRNAQKHADKFGCWYNRDIPALIAASGLRVVSRTRWHFGTT 327 V DA ALPF DN+FDTVVDTFGLCS++ PV A++EM+RVCKP+G+ILLLEHGR +D + L D+NA+KHA ++GC++N+DI A++ + L V +R WHFGTT Sbjct: 54 VADAHALPFPDNSFDTVVDTFGLCSIEDPVKAVQEMQRVCKPEGQILLLEHGRSPYDWLAKLQDKNAEKHAQRWGCYWNKDIGAILQKAELDVKARYDWHFGTT 157
BLAST of mRNA_M-pyrifera_M_contig76891.18113.1 vs. uniprot
Match: A0A7S1U426_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U426_9STRA) HSP 1 Score: 139 bits (350), Expect = 3.200e-40 Identity = 63/104 (60.58%), Postives = 82/104 (78.85%), Query Frame = 1 Query: 16 VGDAEALPFADNAFDTVVDTFGLCSMDSPVSALREMRRVCKPDGKILLLEHGRGTWDIVNYLLDRNAQKHADKFGCWYNRDIPALIAASGLRVVSRTRWHFGTT 327 V DA LP+AD++FDTVVDTFGLCSM+ PV A+REM RVCKP G ILLLEHGR +D + + D++A+KHA ++GC++N+DI ++ A+GL V SR WHFGTT Sbjct: 17 VADAHQLPYADDSFDTVVDTFGLCSMEDPVRAVREMMRVCKPGGAILLLEHGRSPYDWLAKIQDKDAEKHAQRWGCYWNKDIGGILDAAGLDVQSRWDWHFGTT 120
BLAST of mRNA_M-pyrifera_M_contig76891.18113.1 vs. uniprot
Match: A0A7S1QTC6_NEODS (Hypothetical protein (Fragment) n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1QTC6_NEODS) HSP 1 Score: 140 bits (354), Expect = 3.730e-39 Identity = 62/104 (59.62%), Postives = 79/104 (75.96%), Query Frame = 1 Query: 16 VGDAEALPFADNAFDTVVDTFGLCSMDSPVSALREMRRVCKPDGKILLLEHGRGTWDIVNYLLDRNAQKHADKFGCWYNRDIPALIAASGLRVVSRTRWHFGTT 327 V +E+LPF DN+FDTVVD FGLCS D P ALREM RVCKPDG+++L+EHGRGTW +N+ LD+ A +HA +GCW+NRDI + +G++ VSR HFGTT Sbjct: 163 VCSSESLPFPDNSFDTVVDVFGLCSYDQPTLALREMSRVCKPDGQLVLIEHGRGTWARINWYLDKWAPRHASSWGCWWNRDIRRYLRLAGIQTVSREEKHFGTT 266
BLAST of mRNA_M-pyrifera_M_contig76891.18113.1 vs. uniprot
Match: B7FUN7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUN7_PHATC) HSP 1 Score: 139 bits (350), Expect = 1.210e-38 Identity = 67/115 (58.26%), Postives = 81/115 (70.43%), Query Frame = 1 Query: 1 KWRTVVGDAEALPFADNAFDTVVDTFGLCSMDSPVSALREMRRVCKPDGKILLLEHGRG-TWDIVNYLLDRNAQKHADKFGCWYNRDIPALIAASGLRVVSRTRWHFGTTLVYEC 342 ++ + D+ L +NAFDTVVDTFGLCS D PV L+EM RVCKP GKILLLEHGR TWD V LD++A++HA +GC +NRD+ A+IAASGL V RWHFGTT C Sbjct: 143 RFAVIEADSARLSLPENAFDTVVDTFGLCSYDDPVLVLKEMARVCKPSGKILLLEHGRSKTWDFVTDHLDKHAEQHAANWGCVWNRDLDAVIAASGLNVRVLNRWHFGTTYYIVC 257
BLAST of mRNA_M-pyrifera_M_contig76891.18113.1 vs. uniprot
Match: G0U1D7_TRYVY (Uncharacterized protein n=1 Tax=Trypanosoma vivax (strain Y486) TaxID=1055687 RepID=G0U1D7_TRYVY) HSP 1 Score: 134 bits (337), Expect = 8.360e-38 Identity = 60/100 (60.00%), Postives = 74/100 (74.00%), Query Frame = 1 Query: 28 EALPFADNAFDTVVDTFGLCSMDSPVSALREMRRVCKPDGKILLLEHGRGTWDIVNYLLDRNAQKHADKFGCWYNRDIPALIAASGLRVVSRTRWHFGTT 327 E LPF+DN+FD +V+ FGLCS D PV ALREM RVCKPDG +LLLEHG+G W+ +N LD+ A +HA +GCW+NRDI I +GL +V R HFGTT Sbjct: 44 EQLPFSDNSFDVIVEMFGLCSYDDPVRALREMSRVCKPDGHLLLLEHGKGRWERINGYLDKWAPRHAKVWGCWWNRDIRRCIRLAGLTIVKREERHFGTT 143
BLAST of mRNA_M-pyrifera_M_contig76891.18113.1 vs. uniprot
Match: G0USD6_TRYCI (Uncharacterized protein n=1 Tax=Trypanosoma congolense (strain IL3000) TaxID=1068625 RepID=G0USD6_TRYCI) HSP 1 Score: 133 bits (335), Expect = 9.020e-38 Identity = 64/101 (63.37%), Postives = 74/101 (73.27%), Query Frame = 1 Query: 25 AEALPFADNAFDTVVDTFGLCSMDSPVSALREMRRVCKPDGKILLLEHGRGTWDIVNYLLDRNAQKHADKFGCWYNRDIPALIAASGLRVVSRTRWHFGTT 327 AE +PF DN+FDTVVD FGLCS D PV ALREM RVCKP G +LLLEHG+G VN LD+ AQ+HA+ +GCW+NRDI I SGL VV + HFGTT Sbjct: 21 AEQMPFMDNSFDTVVDMFGLCSYDDPVRALREMSRVCKPGGHLLLLEHGKGNCCRVNNYLDKWAQRHANVWGCWWNRDIQRYIRLSGLTVVKKEEKHFGTT 121
BLAST of mRNA_M-pyrifera_M_contig76891.18113.1 vs. uniprot
Match: A0A7S2DMV5_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2DMV5_9DINO) HSP 1 Score: 133 bits (334), Expect = 1.580e-37 Identity = 60/115 (52.17%), Postives = 84/115 (73.04%), Query Frame = 1 Query: 7 RTVVGDAEALPFADNAFDTVVDTFGLCSMDSPVSALREMRRVCKPDGKILLLEHGRGTWDIVNYLLDRNAQKHADKFGCWYNRDIPALIAASGLRVVSRTRWHFGTTLVYECARN 351 R + ++ L F D +FD+VVDTFG+CS +SPV +LREMRRV K DG++LLLEHG +W+++ LL+R AQ+H +KFGC+ NR+I AL+ +GL +V R HFGTT + C R+ Sbjct: 28 RLKLASSQKLDFPDCSFDSVVDTFGVCSFESPVESLREMRRVVKEDGQVLLLEHGASSWELMQGLLNRGAQRHVEKFGCYPNRNIRALVEEAGLHIVKDERKHFGTTYLLVCKRS 142
BLAST of mRNA_M-pyrifera_M_contig76891.18113.1 vs. uniprot
Match: A0A0S4KJ69_BODSA (Methyltransferase, putative (Fragment) n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4KJ69_BODSA) HSP 1 Score: 139 bits (349), Expect = 1.930e-37 Identity = 64/101 (63.37%), Postives = 77/101 (76.24%), Query Frame = 1 Query: 25 AEALPFADNAFDTVVDTFGLCSMDSPVSALREMRRVCKPDGKILLLEHGRGTWDIVNYLLDRNAQKHADKFGCWYNRDIPALIAASGLRVVSRTRWHFGTT 327 AE LPF N+FDTVVD FGLCS D PV AL EM RVCKP+GKILLLEHG+G+WD +N LD+ A +HA +GCW+NRDI + SG++VVSR HFGT+ Sbjct: 231 AEKLPFPTNSFDTVVDMFGLCSFDDPVKALLEMSRVCKPEGKILLLEHGKGSWDKLNNYLDKWAPRHASMWGCWWNRDIRRYLRLSGVQVVSREEKHFGTS 331
BLAST of mRNA_M-pyrifera_M_contig76891.18113.1 vs. uniprot
Match: A0A0L1KZG9_9EUGL (Uncharacterized protein n=1 Tax=Perkinsela sp. CCAP 1560/4 TaxID=1314962 RepID=A0A0L1KZG9_9EUGL) HSP 1 Score: 135 bits (340), Expect = 3.230e-37 Identity = 59/107 (55.14%), Postives = 76/107 (71.03%), Query Frame = 1 Query: 22 DAEALPFADNAFDTVVDTFGLCSMDSPVSALREMRRVCKPDGKILLLEHGRGTWDIVNYLLDRNAQKHADKFGCWYNRDIPALIAASGLRVVSRTRWHFGTTLVYEC 342 D+E LPFAD+ FDTV+DTFGLCS D P+ ALREM RVCKP+GK+LLLEHG+G +N LD+ A HA +GCW+NRDI ++ +G+ + HFGTT + C Sbjct: 137 DSEVLPFADDTFDTVIDTFGLCSYDEPIQALREMSRVCKPEGKLLLLEHGKGNKSWLNNYLDKMAPSHALNWGCWWNRDIQRMVRLAGIECIEEKNMHFGTTQMRIC 243 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76891.18113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig76891.18113.1 >prot_M-pyrifera_M_contig76891.18113.1 ID=prot_M-pyrifera_M_contig76891.18113.1|Name=mRNA_M-pyrifera_M_contig76891.18113.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp KWRTVVGDAEALPFADNAFDTVVDTFGLCSMDSPVSALREMRRVCKPDGKback to top mRNA from alignment at M-pyrifera_M_contig76891:637..990- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig76891.18113.1 ID=mRNA_M-pyrifera_M_contig76891.18113.1|Name=mRNA_M-pyrifera_M_contig76891.18113.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=354bp|location=Sequence derived from alignment at M-pyrifera_M_contig76891:637..990- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig76891:637..990- >mRNA_M-pyrifera_M_contig76891.18113.1 ID=mRNA_M-pyrifera_M_contig76891.18113.1|Name=mRNA_M-pyrifera_M_contig76891.18113.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig76891:637..990- (Macrocystis pyrifera P11B4 male)back to top |