mRNA_M-pyrifera_M_contig76885.18111.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76885.18111.1
Unique NamemRNA_M-pyrifera_M_contig76885.18111.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76885.18111.1 vs. uniprot
Match: A0A3D5DEP8_9GAMM (2-isopropylmalate synthase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DEP8_9GAMM)

HSP 1 Score: 608 bits (1569), Expect = 1.840e-215
Identity = 297/339 (87.61%), Postives = 312/339 (92.04%), Query Frame = 1
Query:    1 QVIESAPTWCSVDLRDGNQALIEPMNVAQKLQMFKQLVKVGFKEIEVGFPAASQPDFDFVRVLIEDGLIPDDVKVQVLTQARPELIRRSFEALAGAKQAIMHLYNSTSTVQREQVFGLDRDGIRKIAVDGAEFVKAEAAKYPGTQWTFQYSPESFTGTELDYAVEVCDAVLDVWDARPDKPCIINLPATVEMATPNVYADQIEWMSTHIKRRAGVVLSLHTHNDRGCAVAAAELGVMAGADRIEGTLLGNGERTGNMDIVTMAMNLYSRGVDPELDLSNMDEIIRCVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLARRGEDDPWDVAYLPID 1017
            ++IE AP WCSVDLRDGNQALIEPMNVAQKL MFK LV VGFKEIEVGFPAASQPDFDFVR LI+D LIPDDV VQVLTQAR ELI RSFE+LAGAK+AIMHLYNSTSTVQREQVF LDR+GI+KIAVD AEFVK E+ KY  T+WTFQYSPESFTGTELDYAV++CDAVLDVWDA P  PCIINLPATVEMATPNVYADQIEWMS +IKRR GV+LSLHTHNDRGCAVAAAELGVM GADRIEGTLLGNGERTGNMDIVTMAMNLYSRG+DPELDLS MDEIIR VKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLARR  D PW+VAYLPID
Sbjct:   25 RIIEHAPLWCSVDLRDGNQALIEPMNVAQKLHMFKLLVNVGFKEIEVGFPAASQPDFDFVRCLIKDNLIPDDVTVQVLTQARSELIERSFESLAGAKRAIMHLYNSTSTVQREQVFALDREGIKKIAVDAAEFVKCESKKYNDTEWTFQYSPESFTGTELDYAVDICDAVLDVWDANPSHPCIINLPATVEMATPNVYADQIEWMSMNIKRRDGVILSLHTHNDRGCAVAAAELGVMGGADRIEGTLLGNGERTGNMDIVTMAMNLYSRGIDPELDLSKMDEIIRGVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLARRDSDSPWEVAYLPID 363          
BLAST of mRNA_M-pyrifera_M_contig76885.18111.1 vs. uniprot
Match: A0A523P2Z1_9PROT (2-isopropylmalate synthase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P2Z1_9PROT)

HSP 1 Score: 600 bits (1548), Expect = 2.860e-212
Identity = 291/339 (85.84%), Postives = 313/339 (92.33%), Query Frame = 1
Query:    1 QVIESAPTWCSVDLRDGNQALIEPMNVAQKLQMFKQLVKVGFKEIEVGFPAASQPDFDFVRVLIEDGLIPDDVKVQVLTQARPELIRRSFEALAGAKQAIMHLYNSTSTVQREQVFGLDRDGIRKIAVDGAEFVKAEAAKYPGTQWTFQYSPESFTGTELDYAVEVCDAVLDVWDARPDKPCIINLPATVEMATPNVYADQIEWMSTHIKRRAGVVLSLHTHNDRGCAVAAAELGVMAGADRIEGTLLGNGERTGNMDIVTMAMNLYSRGVDPELDLSNMDEIIRCVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLARRGEDDPWDVAYLPID 1017
            QVIE APTWCSVDLRDGNQALIEPMNVAQKL++FK LVKVGFKEIEVGFPAASQPDFDFVR LI+DGLIP DV VQVLTQARP LI RSF AL G ++AIMHLYNSTSTVQREQVF LDRDG++ IAV+GA+ +   AA YP T WTFQYSPESFTGTELDYAVEVCD+VLDVW ARP++PCIINLPATVEM+TPNVYADQIEWMSTHIKRR GV+LSLHTHNDRGC VAAAELGVMAGA+RIEGTLLGNGERTGNMDIVTMAMNLYS+GVDP+LDLSNMDEIIRCVKACTQ+ +HPRHPYAGELVFTAFSGSHQDAIKKCLA+R  + PWDVAYLPID
Sbjct:   25 QVIEHAPTWCSVDLRDGNQALIEPMNVAQKLELFKLLVKVGFKEIEVGFPAASQPDFDFVRCLIDDGLIPHDVTVQVLTQARPALIERSFVALVGVRRAIMHLYNSTSTVQREQVFALDRDGVKAIAVNGAKRIIDGAAAYPETAWTFQYSPESFTGTELDYAVEVCDSVLDVWAARPEQPCIINLPATVEMSTPNVYADQIEWMSTHIKRRDGVILSLHTHNDRGCGVAAAELGVMAGAERIEGTLLGNGERTGNMDIVTMAMNLYSQGVDPQLDLSNMDEIIRCVKACTQMSIHPRHPYAGELVFTAFSGSHQDAIKKCLAQRTPEQPWDVAYLPID 363          
BLAST of mRNA_M-pyrifera_M_contig76885.18111.1 vs. uniprot
Match: A0A1Z9UI16_9GAMM (2-isopropylmalate synthase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UI16_9GAMM)

HSP 1 Score: 589 bits (1519), Expect = 7.290e-208
Identity = 286/339 (84.37%), Postives = 311/339 (91.74%), Query Frame = 1
Query:    1 QVIESAPTWCSVDLRDGNQALIEPMNVAQKLQMFKQLVKVGFKEIEVGFPAASQPDFDFVRVLIEDGLIPDDVKVQVLTQARPELIRRSFEALAGAKQAIMHLYNSTSTVQREQVFGLDRDGIRKIAVDGAEFVKAEAAKYPGTQWTFQYSPESFTGTELDYAVEVCDAVLDVWDARPDKPCIINLPATVEMATPNVYADQIEWMSTHIKRRAGVVLSLHTHNDRGCAVAAAELGVMAGADRIEGTLLGNGERTGNMDIVTMAMNLYSRGVDPELDLSNMDEIIRCVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLARRGEDDPWDVAYLPID 1017
            Q I+ AP WCSVDLRDGNQALIEPMNV+QKLQMFK LVKVGFKEIEVGFPAASQPDFDFVR L+E+ LIPDDV VQVLTQAR ELI RSFE+L+GAK AIMHLYNSTSTVQR++VF LDRDGI+ IAV+GA+ V +E+ KY  T+W F+YSPESFTGTELDYAVEVCDAVLDVW+A  + PC+INLPATVEMATPN+YADQIEWMS ++ RRAGVVLSLHTHNDRGCAVAAAELGVMAGADRIEGTLLGNGERTGNMDIVTMAMNLYS+G++PELDLSNMDEIIRCVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCL +R  DD W VAYLPID
Sbjct:   25 QEIKKAPLWCSVDLRDGNQALIEPMNVSQKLQMFKLLVKVGFKEIEVGFPAASQPDFDFVRTLVEENLIPDDVTVQVLTQAREELIVRSFESLSGAKNAIMHLYNSTSTVQRDKVFELDRDGIKNIAVEGAKVVLSESKKYRDTKWRFEYSPESFTGTELDYAVEVCDAVLDVWNASEENPCVINLPATVEMATPNIYADQIEWMSRNLARRAGVVLSLHTHNDRGCAVAAAELGVMAGADRIEGTLLGNGERTGNMDIVTMAMNLYSQGIEPELDLSNMDEIIRCVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLTKRQPDDKWAVAYLPID 363          
BLAST of mRNA_M-pyrifera_M_contig76885.18111.1 vs. uniprot
Match: A0A7Y7D9B6_9GAMM (2-isopropylmalate synthase n=2 Tax=Oceanospirillaceae TaxID=135620 RepID=A0A7Y7D9B6_9GAMM)

HSP 1 Score: 566 bits (1459), Expect = 9.490e-199
Identity = 270/339 (79.65%), Postives = 302/339 (89.09%), Query Frame = 1
Query:    1 QVIESAPTWCSVDLRDGNQALIEPMNVAQKLQMFKQLVKVGFKEIEVGFPAASQPDFDFVRVLIEDGLIPDDVKVQVLTQARPELIRRSFEALAGAKQAIMHLYNSTSTVQREQVFGLDRDGIRKIAVDGAEFVKAEAAKYPGTQWTFQYSPESFTGTELDYAVEVCDAVLDVWDARPDKPCIINLPATVEMATPNVYADQIEWMSTHIKRRAGVVLSLHTHNDRGCAVAAAELGVMAGADRIEGTLLGNGERTGNMDIVTMAMNLYSRGVDPELDLSNMDEIIRCVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLARRGEDDPWDVAYLPID 1017
            +VIE AP WCSVDLRDGNQALIEPMNV QK +MF+ LVK+GFKEIEVGFPAASQPDFDFVR LI++ LIP+DV +QVLTQAR EL+ R+FEAL GA++A++H+YNSTSTVQREQVFGLDRDGI+ IAV GAE V+ EA +YP T+W FQYSPESFTGTELDYAVEVCDAV  VW   PD   IINLPATVEMATPNV+ADQ+EW+  HI RR  +++S+HTHNDRGC VAAAEL VMAGADR+EGTLLGNGERTGNMDIVTMA+NLYS+GVDPELDLSNMDEI+ CVKACTQLPVHPRHPYAGELVFTAFSGSHQDAI+KCLARR  D PW+VAYLPID
Sbjct:   25 RVIERAPLWCSVDLRDGNQALIEPMNVVQKRRMFELLVKLGFKEIEVGFPAASQPDFDFVRTLIKENLIPEDVTIQVLTQAREELVVRTFEALRGARRAVVHVYNSTSTVQREQVFGLDRDGIKSIAVRGAEIVRREAQRYPETEWVFQYSPESFTGTELDYAVEVCDAVTAVWQPTPDNKAIINLPATVEMATPNVFADQVEWVCDHIARRDSLIVSVHTHNDRGCGVAAAELAVMAGADRVEGTLLGNGERTGNMDIVTMALNLYSQGVDPELDLSNMDEIVECVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIRKCLARREPDAPWNVAYLPID 363          
BLAST of mRNA_M-pyrifera_M_contig76885.18111.1 vs. uniprot
Match: A0A1A9ET25_9GAMM (2-isopropylmalate synthase n=3 Tax=Marinobacterium TaxID=48075 RepID=A0A1A9ET25_9GAMM)

HSP 1 Score: 561 bits (1445), Expect = 1.310e-196
Identity = 272/339 (80.24%), Postives = 298/339 (87.91%), Query Frame = 1
Query:    1 QVIESAPTWCSVDLRDGNQALIEPMNVAQKLQMFKQLVKVGFKEIEVGFPAASQPDFDFVRVLIEDGLIPDDVKVQVLTQARPELIRRSFEALAGAKQAIMHLYNSTSTVQREQVFGLDRDGIRKIAVDGAEFVKAEAAKYPGTQWTFQYSPESFTGTELDYAVEVCDAVLDVWDARPDKPCIINLPATVEMATPNVYADQIEWMSTHIKRRAGVVLSLHTHNDRGCAVAAAELGVMAGADRIEGTLLGNGERTGNMDIVTMAMNLYSRGVDPELDLSNMDEIIRCVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLARRGEDDPWDVAYLPID 1017
            Q+I+ AP WCSVDLRDGNQALIEPMNV QK +MF+ LVK+GFKEIEVGFPAASQPDFDFVR LI D LIPDDV +QVLTQAR ELI R+FE+L GA++AI+HLYNSTSTVQREQVFGLDR+GIR IAV GA  V   A++ P TQW FQYSPESFTGTELDYAVEVCDAV  VW   PD   IINLPATVEM+TPNV+ADQIEW+  HI RR  +++SLHTHNDRGC VAAAELGVMAGADRIEGTLLGNGERTGNMDIVTMA+NLYS+GVDP+LDL+NMDEI+ CVKACTQLPVHPRHPYAGELVFTAFSGSHQDAI+KCLARR  D  WDVAYLPID
Sbjct:   25 QIIDRAPRWCSVDLRDGNQALIEPMNVVQKRRMFELLVKLGFKEIEVGFPAASQPDFDFVRSLITDNLIPDDVTIQVLTQARDELIARTFESLRGARRAIVHLYNSTSTVQREQVFGLDREGIRAIAVKGAHTVARLASERPETQWVFQYSPESFTGTELDYAVEVCDAVTAVWQPTPDNKVIINLPATVEMSTPNVFADQIEWVCDHIARRDSIIISLHTHNDRGCGVAAAELGVMAGADRIEGTLLGNGERTGNMDIVTMALNLYSQGVDPQLDLANMDEIVECVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIRKCLARRQSDASWDVAYLPID 363          
BLAST of mRNA_M-pyrifera_M_contig76885.18111.1 vs. uniprot
Match: A0A2E8KEF1_9GAMM (2-isopropylmalate synthase n=2 Tax=Cellvibrionales bacterium TaxID=2026722 RepID=A0A2E8KEF1_9GAMM)

HSP 1 Score: 549 bits (1415), Expect = 3.590e-192
Identity = 267/339 (78.76%), Postives = 296/339 (87.32%), Query Frame = 1
Query:    1 QVIESAPTWCSVDLRDGNQALIEPMNVAQKLQMFKQLVKVGFKEIEVGFPAASQPDFDFVRVLIEDGLIPDDVKVQVLTQARPELIRRSFEALAGAKQAIMHLYNSTSTVQREQVFGLDRDGIRKIAVDGAEFVKAEAAKYPGTQWTFQYSPESFTGTELDYAVEVCDAVLDVWDARPDKPCIINLPATVEMATPNVYADQIEWMSTHIKRRAGVVLSLHTHNDRGCAVAAAELGVMAGADRIEGTLLGNGERTGNMDIVTMAMNLYSRGVDPELDLSNMDEIIRCVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLARRGEDDPWDVAYLPID 1017
            +VIE AP+WCSVDLRDGNQALIEPM VAQKLQ+F+ LVKVGFKEIEVGFPAASQ DFDFVR LIE  LIPDDVKVQVLTQAR +LI RS+E+L G KQAI+H+YNSTSTVQRE+VFGLD+ GI+ IAV GAE+V   AA  P T W FQYSPESFTGTE+DYA+EVCDAV+DVW   P++P I+NLPATVEM TPNVYADQIE+ S H++ R  V++SLHTHNDRGCAVAAAEL V  GADR+EGTLLGNGERTGNMDIVTM MNLYSRGVDP+LD SN+DEII+ VKACT LPVHPRHPYAGELVFTAFSGSHQDAIKKCLA +  D PWDVAYLPID
Sbjct:   25 KVIEQAPSWCSVDLRDGNQALIEPMTVAQKLQLFELLVKVGFKEIEVGFPAASQTDFDFVRCLIEQQLIPDDVKVQVLTQAREDLISRSYESLKGVKQAIVHVYNSTSTVQREKVFGLDQAGIKAIAVKGAEWVMQYAAAQPETDWYFQYSPESFTGTEIDYAIEVCDAVIDVWQPTPERPIILNLPATVEMTTPNVYADQIEYFSRHVQSRDAVLVSLHTHNDRGCAVAAAELAVQGGADRVEGTLLGNGERTGNMDIVTMGMNLYSRGVDPQLDFSNIDEIIQVVKACTNLPVHPRHPYAGELVFTAFSGSHQDAIKKCLAVQQGDQPWDVAYLPID 363          
BLAST of mRNA_M-pyrifera_M_contig76885.18111.1 vs. uniprot
Match: A0A418YBU9_9GAMM (2-isopropylmalate synthase n=1 Tax=Motilimonas pumila TaxID=2303987 RepID=A0A418YBU9_9GAMM)

HSP 1 Score: 548 bits (1413), Expect = 7.990e-192
Identity = 264/339 (77.88%), Postives = 295/339 (87.02%), Query Frame = 1
Query:    1 QVIESAPTWCSVDLRDGNQALIEPMNVAQKLQMFKQLVKVGFKEIEVGFPAASQPDFDFVRVLIEDGLIPDDVKVQVLTQARPELIRRSFEALAGAKQAIMHLYNSTSTVQREQVFGLDRDGIRKIAVDGAEFVKAEAAKYPGTQWTFQYSPESFTGTELDYAVEVCDAVLDVWDARPDKPCIINLPATVEMATPNVYADQIEWMSTHIKRRAGVVLSLHTHNDRGCAVAAAELGVMAGADRIEGTLLGNGERTGNMDIVTMAMNLYSRGVDPELDLSNMDEIIRCVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLARRGEDDPWDVAYLPID 1017
            QVI +AP WCSVDLRDGNQALI+PM V QK Q++ QLVKVGFKEIEVGFPAASQPDFDFVR LIE   IP+DV +QVLTQARP LI R+FEAL GAK+A++HLYNSTSTVQREQVF LD+ GI  IAV G E VKA   KYP T+WT QYSPESFTGTEL++AVEVCDAV+  W   P+   I+NLPATVEMATPNVYADQIEW   HI++R  +++SLHTHNDRGC VAAAELGVMAGADR+EGTLLGNGERTGNMDIVTMAMNLYS+G+DPELD SN+DE+++ VKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLARR +DD W+VAYLPID
Sbjct:   25 QVITAAPAWCSVDLRDGNQALIDPMTVEQKKQLWGQLVKVGFKEIEVGFPAASQPDFDFVRWLIEQDQIPEDVTIQVLTQARPALIERTFEALVGAKKAVVHLYNSTSTVQREQVFQLDQAGIIDIAVKGTECVKALTKKYPQTEWTLQYSPESFTGTELEFAVEVCDAVVATWQPTPEHKMIVNLPATVEMATPNVYADQIEWFGNHIQQRESIIISLHTHNDRGCGVAAAELGVMAGADRVEGTLLGNGERTGNMDIVTMAMNLYSQGIDPELDFSNIDEVVQVVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLARRQDDDIWNVAYLPID 363          
BLAST of mRNA_M-pyrifera_M_contig76885.18111.1 vs. uniprot
Match: A0A072N5F0_9GAMM (2-isopropylmalate synthase n=1 Tax=Marinobacter nitratireducens TaxID=1137280 RepID=A0A072N5F0_9GAMM)

HSP 1 Score: 542 bits (1397), Expect = 3.230e-189
Identity = 261/338 (77.22%), Postives = 298/338 (88.17%), Query Frame = 1
Query:    4 VIESAPTWCSVDLRDGNQALIEPMNVAQKLQMFKQLVKVGFKEIEVGFPAASQPDFDFVRVLIEDGLIPDDVKVQVLTQARPELIRRSFEALAGAKQAIMHLYNSTSTVQREQVFGLDRDGIRKIAVDGAEFVKAEAAKYPGTQWTFQYSPESFTGTELDYAVEVCDAVLDVWDARPDKPCIINLPATVEMATPNVYADQIEWMSTHIKRRAGVVLSLHTHNDRGCAVAAAELGVMAGADRIEGTLLGNGERTGNMDIVTMAMNLYSRGVDPELDLSNMDEIIRCVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLARRGEDDPWDVAYLPID 1017
            VIE AP WC+VDLRDGNQAL++PMNVAQK ++F  LVK+GFKEIE+GFPAASQPDFDF R LI++  IPDDVK+QVLTQARPELI R++EAL GAKQAI+H+YNSTSTVQREQVFGLDRDGIR IA++GAE V+  AAK+P TQWTFQYSPESFTGTELD+AV+V DAV +VW     +P IINLPATVEMATPNV+ADQIEW+  +I+RR  + +SLHTHNDRGCAVAAAELGVMAGADRIEGTL+GNGERTGNMD+VTMAMNLYS+G+DP LDLS M EI   V+ACT++  HPRHPYAGELVFTAFSGSHQDAI+KCLARR E D W+VAYLPID
Sbjct:   25 VIEKAPVWCAVDLRDGNQALVKPMNVAQKQRLFDLLVKLGFKEIEIGFPAASQPDFDFCRKLIDENRIPDDVKIQVLTQARPELIERTYEALKGAKQAIVHVYNSTSTVQREQVFGLDRDGIRDIAINGAELVRDLAAKHPETQWTFQYSPESFTGTELDFAVDVIDAVTEVWRPDQGQPVIINLPATVEMATPNVFADQIEWVCDNIQRREHISISLHTHNDRGCAVAAAELGVMAGADRIEGTLMGNGERTGNMDLVTMAMNLYSQGIDPNLDLSGMAEITEVVEACTEISTHPRHPYAGELVFTAFSGSHQDAIRKCLARREEGDVWNVAYLPID 362          
BLAST of mRNA_M-pyrifera_M_contig76885.18111.1 vs. uniprot
Match: A0A1X9ND68_9GAMM (2-isopropylmalate synthase n=1 Tax=Oceanicoccus sagamiensis TaxID=716816 RepID=A0A1X9ND68_9GAMM)

HSP 1 Score: 540 bits (1392), Expect = 1.410e-188
Identity = 264/339 (77.88%), Postives = 291/339 (85.84%), Query Frame = 1
Query:    1 QVIESAPTWCSVDLRDGNQALIEPMNVAQKLQMFKQLVKVGFKEIEVGFPAASQPDFDFVRVLIEDGLIPDDVKVQVLTQARPELIRRSFEALAGAKQAIMHLYNSTSTVQREQVFGLDRDGIRKIAVDGAEFVKAEAAKYPGTQWTFQYSPESFTGTELDYAVEVCDAVLDVWDARPDKPCIINLPATVEMATPNVYADQIEWMSTHIKRRAGVVLSLHTHNDRGCAVAAAELGVMAGADRIEGTLLGNGERTGNMDIVTMAMNLYSRGVDPELDLSNMDEIIRCVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLARRGEDDPWDVAYLPID 1017
            Q I+ AP WCSVDLRDGNQALIEPMN  QKL +FK LV VGFKEIEVGFPAASQ DFDFVR +IE GLIP+DV +QVLTQ+R  LI+RSFEAL G +QAIMHLYNSTSTVQREQVF   ++ I+ IAV GA++VK +AA+ P TQWTFQYSPESFTGTELDYAVEVCDAV  VW    + P IINLPATVE+ATPN+YADQIEWM  HI+ R  VV+SLHTHNDRGC VAAAELGVMAGADR+EGTLLGNGERTGNMDIVTMAMNLYS+G++PELDLSNMD+II+ V  CTQLP+HPRHPYAGELVFTAFSGSHQDAIKKCL R    D WDVAYLPID
Sbjct:   25 QQIKQAPRWCSVDLRDGNQALIEPMNPKQKLALFKLLVDVGFKEIEVGFPAASQTDFDFVRQIIEQGLIPEDVTIQVLTQSREALIKRSFEALKGCRQAIMHLYNSTSTVQREQVFAKSKNEIKAIAVQGAQWVKQQAAQQPDTQWTFQYSPESFTGTELDYAVEVCDAVNAVWQPTKENPVIINLPATVEVATPNIYADQIEWMGDHIQHREAVVISLHTHNDRGCGVAAAELGVMAGADRVEGTLLGNGERTGNMDIVTMAMNLYSQGINPELDLSNMDKIIQTVTECTQLPLHPRHPYAGELVFTAFSGSHQDAIKKCLQRYQPGDHWDVAYLPID 363          
BLAST of mRNA_M-pyrifera_M_contig76885.18111.1 vs. uniprot
Match: UPI001E5E09EE (2-isopropylmalate synthase n=1 Tax=Motilimonas eburnea TaxID=1737488 RepID=UPI001E5E09EE)

HSP 1 Score: 540 bits (1392), Expect = 1.510e-188
Identity = 265/339 (78.17%), Postives = 291/339 (85.84%), Query Frame = 1
Query:    1 QVIESAPTWCSVDLRDGNQALIEPMNVAQKLQMFKQLVKVGFKEIEVGFPAASQPDFDFVRVLIEDGLIPDDVKVQVLTQARPELIRRSFEALAGAKQAIMHLYNSTSTVQREQVFGLDRDGIRKIAVDGAEFVKAEAAKYPGTQWTFQYSPESFTGTELDYAVEVCDAVLDVWDARPDKPCIINLPATVEMATPNVYADQIEWMSTHIKRRAGVVLSLHTHNDRGCAVAAAELGVMAGADRIEGTLLGNGERTGNMDIVTMAMNLYSRGVDPELDLSNMDEIIRCVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLARRGEDDPWDVAYLPID 1017
            +VIE APTWCSVDLRDGNQALIEPM+V QK  ++  LVKVGFKEIEVGFPAASQPDFDFVR LIE+  IPDDV +QVLTQARP LI RSFEAL GAK+A++HLYNSTSTVQREQVF LDR GI  IAV G E VKA A   P TQW  QYSPESFTGTELD+AVE+CDAV+  W    D   IINLPATVEMATPNVYADQIEW   H+ +R  +++SLHTHNDRGC VAAAELGVMAGADRIEGTLLGNGERTGNMD+VTMAMNLYS+G+DPELD SN+DE+++ VKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLA+R E D W+VAYLPID
Sbjct:   25 KVIEQAPTWCSVDLRDGNQALIEPMSVEQKKVLWALLVKVGFKEIEVGFPAASQPDFDFVRWLIEEDQIPDDVTIQVLTQARPALIERSFEALKGAKRAVVHLYNSTSTVQREQVFKLDRAGIIDIAVTGTECVKALAQANPETQWILQYSPESFTGTELDFAVEICDAVVATWQPEGDDKVIINLPATVEMATPNVYADQIEWFVKHVAKRDQIIISLHTHNDRGCGVAAAELGVMAGADRIEGTLLGNGERTGNMDVVTMAMNLYSQGIDPELDFSNIDEVVQTVKACTQLPVHPRHPYAGELVFTAFSGSHQDAIKKCLAQRQEGDIWNVAYLPID 363          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76885.18111.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DEP8_9GAMM1.840e-21587.612-isopropylmalate synthase n=1 Tax=Gammaproteobact... [more]
A0A523P2Z1_9PROT2.860e-21285.842-isopropylmalate synthase n=1 Tax=Proteobacteria ... [more]
A0A1Z9UI16_9GAMM7.290e-20884.372-isopropylmalate synthase n=3 Tax=Gammaproteobact... [more]
A0A7Y7D9B6_9GAMM9.490e-19979.652-isopropylmalate synthase n=2 Tax=Oceanospirillac... [more]
A0A1A9ET25_9GAMM1.310e-19680.242-isopropylmalate synthase n=3 Tax=Marinobacterium... [more]
A0A2E8KEF1_9GAMM3.590e-19278.762-isopropylmalate synthase n=2 Tax=Cellvibrionales... [more]
A0A418YBU9_9GAMM7.990e-19277.882-isopropylmalate synthase n=1 Tax=Motilimonas pum... [more]
A0A072N5F0_9GAMM3.230e-18977.222-isopropylmalate synthase n=1 Tax=Marinobacter ni... [more]
A0A1X9ND68_9GAMM1.410e-18877.882-isopropylmalate synthase n=1 Tax=Oceanicoccus sa... [more]
UPI001E5E09EE1.510e-18878.172-isopropylmalate synthase n=1 Tax=Motilimonas ebu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76885contigM-pyrifera_M_contig76885:3..1019 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score540.4
Seed ortholog evalue5.9e-151
Seed eggNOG ortholog314285.KT71_04515
Preferred nameleuA
KEGG rclassRC00004,RC00470,RC02754
KEGG koko:K01649
KEGG ReactionR01213
KEGG Pathwayko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230
KEGG ModuleM00432
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
EggNOG OGs1J7QZ@118884,1MUNQ@1224,1RMWE@1236,COG0119@1,COG0119@2
EC2.3.3.13
COG Functional cat.E
Best tax levelunclassified Gammaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Exons1
Model size1017
Cds size1017
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816668.0417173-CDS-M-pyrifera_M_contig76885:2..10191622816668.0417173-CDS-M-pyrifera_M_contig76885:2..1019Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76885 3..1019 +
1692278108.3439322-CDS-M-pyrifera_M_contig76885:2..10191692278108.3439322-CDS-M-pyrifera_M_contig76885:2..1019Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76885 3..1019 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76885.18111.1prot_M-pyrifera_M_contig76885.18111.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76885 3..1019 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76885.18111.1

>prot_M-pyrifera_M_contig76885.18111.1 ID=prot_M-pyrifera_M_contig76885.18111.1|Name=mRNA_M-pyrifera_M_contig76885.18111.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=339bp
QVIESAPTWCSVDLRDGNQALIEPMNVAQKLQMFKQLVKVGFKEIEVGFP
AASQPDFDFVRVLIEDGLIPDDVKVQVLTQARPELIRRSFEALAGAKQAI
MHLYNSTSTVQREQVFGLDRDGIRKIAVDGAEFVKAEAAKYPGTQWTFQY
SPESFTGTELDYAVEVCDAVLDVWDARPDKPCIINLPATVEMATPNVYAD
QIEWMSTHIKRRAGVVLSLHTHNDRGCAVAAAELGVMAGADRIEGTLLGN
GERTGNMDIVTMAMNLYSRGVDPELDLSNMDEIIRCVKACTQLPVHPRHP
YAGELVFTAFSGSHQDAIKKCLARRGEDDPWDVAYLPID
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mRNA from alignment at M-pyrifera_M_contig76885:3..1019+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76885.18111.1 ID=mRNA_M-pyrifera_M_contig76885.18111.1|Name=mRNA_M-pyrifera_M_contig76885.18111.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1017bp|location=Sequence derived from alignment at M-pyrifera_M_contig76885:3..1019+ (Macrocystis pyrifera P11B4 male)
CAGGTCATCGAATCCGCGCCGACGTGGTGCAGCGTCGATCTCCGCGACGG TAACCAGGCGCTGATCGAGCCGATGAACGTGGCGCAGAAACTGCAGATGT TCAAACAGCTCGTGAAAGTCGGCTTCAAGGAGATCGAAGTCGGCTTCCCG GCCGCGTCGCAACCGGATTTCGATTTCGTCCGCGTGTTGATCGAAGACGG TCTGATCCCGGACGACGTGAAGGTGCAGGTGCTGACGCAGGCGCGACCGG AACTCATCCGTCGCTCGTTCGAGGCGCTCGCCGGTGCGAAGCAGGCGATC ATGCACCTGTACAACTCCACCTCGACGGTGCAGCGCGAACAGGTGTTCGG ACTCGACCGCGACGGGATCAGGAAAATCGCCGTCGACGGCGCCGAATTCG TCAAGGCCGAGGCGGCGAAGTACCCCGGGACGCAATGGACGTTCCAGTAT TCGCCGGAAAGTTTCACCGGCACGGAACTCGATTACGCGGTTGAAGTGTG CGACGCCGTGCTCGACGTCTGGGACGCGCGTCCCGACAAGCCGTGCATTA TCAACCTGCCGGCAACGGTGGAGATGGCGACGCCGAATGTCTATGCCGAT CAAATCGAATGGATGTCGACGCATATCAAGCGTCGCGCCGGCGTGGTATT GAGCCTGCACACGCATAACGATCGCGGCTGCGCCGTGGCCGCGGCGGAAC TCGGGGTCATGGCCGGCGCCGATCGGATCGAGGGCACCTTGCTCGGCAAT GGCGAGCGCACCGGCAACATGGACATCGTGACGATGGCGATGAACCTGTA CAGCCGCGGCGTCGATCCGGAACTCGATCTGTCGAACATGGACGAGATCA TCCGCTGCGTGAAAGCGTGCACCCAGTTGCCCGTGCATCCGCGGCACCCG TACGCCGGTGAACTCGTGTTCACGGCGTTTTCCGGCAGCCACCAGGATGC CATCAAGAAGTGCCTCGCGCGGCGCGGTGAGGACGACCCGTGGGACGTCG CCTACCTGCCGATCGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76885:3..1019+

>mRNA_M-pyrifera_M_contig76885.18111.1 ID=mRNA_M-pyrifera_M_contig76885.18111.1|Name=mRNA_M-pyrifera_M_contig76885.18111.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2034bp|location=Sequence derived from alignment at M-pyrifera_M_contig76885:3..1019+ (Macrocystis pyrifera P11B4 male)
CAGGTCATCGAATCCGCGCCGACGTGGTGCAGCGTCGATCTCCGCGACGG
TAACCAGGCGCTGATCGAGCCGATGAACGTGGCGCAGAAACTGCAGATGT
TCAAACAGCTCGTGAAAGTCGGCTTCAAGGAGATCGAAGTCGGCTTCCCG
GCCGCGTCGCAACCGGATTTCGATTTCGTCCGCGTGTTGATCGAAGACGG
TCTGATCCCGGACGACGTGAAGGTGCAGGTGCTGACGCAGGCGCGACCGG
AACTCATCCGTCGCTCGTTCGAGGCGCTCGCCGGTGCGAAGCAGGCGATC
ATGCACCTGTACAACTCCACCTCGACGGTGCAGCGCGAACAGGTGTTCGG
ACTCGACCGCGACGGGATCAGGAAAATCGCCGTCGACGGCGCCGAATTCG
TCAAGGCCGAGGCGGCGAAGTACCCCGGGACGCAATGGACGTTCCAGTAT
TCGCCGGAAAGTTTCACCGGCACGGAACTCGATTACGCGGTTGAAGTGTG
CGACGCCGTGCTCGACGTCTGGGACGCGCGTCCCGACAAGCCGTGCATTA
TCAACCTGCCGGCAACGGTGGAGATGGCGACGCCGAATGTCTATGCCGAT
CAAATCGAATGGATGTCGACGCATATCAAGCGTCGCGCCGGCGTGGTATT
GAGCCTGCACACGCATAACGATCGCGGCTGCGCCGTGGCCGCGGCGGAAC
TCGGGGTCATGGCCGGCGCCGATCGGATCGAGGGCACCTTGCTCGGCAAT
GGCGAGCGCACCGGCAACATGGACATCGTGACGATGGCGATGAACCTGTA
CAGCCGCGGCGTCGATCCGGAACTCGATCTGTCGAACATGGACGAGATCA
TCCGCTGCGTGAAAGCGTGCACCCAGTTGCCCGTGCATCCGCGGCACCCG
TACGCCGGTGAACTCGTGTTCACGGCGTTTTCCGGCAGCCACCAGGATGC
CATCAAGAAGTGCCTCGCGCGGCGCGGTGAGGACGACCCGTGGGACGTCG
CCTACCTGCCGATCGATCAGGTCATCGAATCCGCGCCGACGTGGTGCAGC
GTCGATCTCCGCGACGGTAACCAGGCGCTGATCGAGCCGATGAACGTGGC
GCAGAAACTGCAGATGTTCAAACAGCTCGTGAAAGTCGGCTTCAAGGAGA
TCGAAGTCGGCTTCCCGGCCGCGTCGCAACCGGATTTCGATTTCGTCCGC
GTGTTGATCGAAGACGGTCTGATCCCGGACGACGTGAAGGTGCAGGTGCT
GACGCAGGCGCGACCGGAACTCATCCGTCGCTCGTTCGAGGCGCTCGCCG
GTGCGAAGCAGGCGATCATGCACCTGTACAACTCCACCTCGACGGTGCAG
CGCGAACAGGTGTTCGGACTCGACCGCGACGGGATCAGGAAAATCGCCGT
CGACGGCGCCGAATTCGTCAAGGCCGAGGCGGCGAAGTACCCCGGGACGC
AATGGACGTTCCAGTATTCGCCGGAAAGTTTCACCGGCACGGAACTCGAT
TACGCGGTTGAAGTGTGCGACGCCGTGCTCGACGTCTGGGACGCGCGTCC
CGACAAGCCGTGCATTATCAACCTGCCGGCAACGGTGGAGATGGCGACGC
CGAATGTCTATGCCGATCAAATCGAATGGATGTCGACGCATATCAAGCGT
CGCGCCGGCGTGGTATTGAGCCTGCACACGCATAACGATCGCGGCTGCGC
CGTGGCCGCGGCGGAACTCGGGGTCATGGCCGGCGCCGATCGGATCGAGG
GCACCTTGCTCGGCAATGGCGAGCGCACCGGCAACATGGACATCGTGACG
ATGGCGATGAACCTGTACAGCCGCGGCGTCGATCCGGAACTCGATCTGTC
GAACATGGACGAGATCATCCGCTGCGTGAAAGCGTGCACCCAGTTGCCCG
TGCATCCGCGGCACCCGTACGCCGGTGAACTCGTGTTCACGGCGTTTTCC
GGCAGCCACCAGGATGCCATCAAGAAGTGCCTCGCGCGGCGCGGTGAGGA
CGACCCGTGGGACGTCGCCTACCTGCCGATCGAT
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