mRNA_M-pyrifera_M_contig76834.18104.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig76834.18104.1 vs. uniprot
Match: UPI001B88DBA0 (unsaturated rhamnogalacturonyl hydrolase YesR-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DBA0) HSP 1 Score: 137 bits (344), Expect = 3.780e-37 Identity = 79/176 (44.89%), Postives = 108/176 (61.36%), Query Frame = 1 Query: 19 YPGSSNASLFFHGLN-APSTPSCCFWGRAQGWAMMSAVEVLETMDAVAPSHPLR-APLLEAFQRHAHGMLATQSSDGRWHQVVNDTSTYLETSVSAMTTWALLHAARSGYLPST-VRENAARAWTAVASQIMPNGTVNGICIGTGIQQNVQQYQQRPTPWVFSQPG-LGAVFLAAI 534 Y S L +HG N A SCC WGRA GW++ ++VEVL + P + + +L+ FQ HA GML QS+DGRW QVVN++STYLETSV+AMT AL A G+L AW + + +GTV+G+C GTGIQ V+ Y++RPTP++ S+ G +G+V AA+ Sbjct: 32 YLQDSEDGLVYHGYNDADKHHSCCKWGRANGWSITASVEVLLALQEFKDIMPSKWSGVLKIFQTHASGMLRYQSTDGRWRQVVNESSTYLETSVTAMTLSALSRAVTQGWLDKEKYGPKLDLAWEGLQGVLQADGTVDGVCTGTGIQTCVEDYEKRPTPYLNSRNGGVGSVLHAAV 207
BLAST of mRNA_M-pyrifera_M_contig76834.18104.1 vs. uniprot
Match: UPI001B88A4E2 (unsaturated rhamnogalacturonyl hydrolase YesR-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88A4E2) HSP 1 Score: 137 bits (346), Expect = 2.170e-36 Identity = 74/170 (43.53%), Postives = 111/170 (65.29%), Query Frame = 1 Query: 43 LFFHGLNA-PSTPSCCFWGRAQGWAMMSAVEVLETMDAVAPSHPLRAP---LLEAFQRHAHGMLATQSSDGRWHQVVNDTSTYLETSVSAMTTWALLHAARSGYLP-STVRENAARAWTAVASQIMPNGTVNGICIGTGIQQNVQQYQQRPTPWVFSQPG-LGAVFLAAI 534 LFFHG+N P T SCC WGRA GW++ ++VEVL + S L++ ++++F+RHA GM QSSDGRWHQ+V+D +++LETS +AMT ++ A G+L EN R W + + + P+GTVNG+C+GTGIQ Y++R T ++ ++ G +G V+ AA+ Sbjct: 107 LFFHGVNTQPKTLSCCKWGRANGWSITASVEVLLALKPFKES--LKSEWDTIMDSFRRHARGMAKHQSSDGRWHQLVDDDTSFLETSCTAMTLSSIARAVNEGWLDRKEFVENLHRGWKGLETVLKPDGTVNGVCVGTGIQPAASDYRKRGTTYLETRNGGIGFVYHAAV 274
BLAST of mRNA_M-pyrifera_M_contig76834.18104.1 vs. uniprot
Match: UPI001B889F93 (unsaturated rhamnogalacturonyl hydrolase YesR-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B889F93) HSP 1 Score: 137 bits (345), Expect = 2.350e-35 Identity = 75/169 (44.38%), Postives = 110/169 (65.09%), Query Frame = 1 Query: 43 LFFHGLN-APSTPSCCFWGRAQGWAMMSAVEVLETMDAVAPS--HPLRAPLLEAFQRHAHGMLATQSSDGRWHQVVNDTSTYLETSVSAMTTWALLHAARSGYLP-STVRENAARAWTAVASQIMPNGTVNGICIGTGIQQNVQQYQQRPTPWVFSQPG-LGAVFLAAI 534 LFFHG+N AP T SCC WGRA GW++ ++VEVL T+ S H A ++++F+RHA GM+ QSSDGRWHQ+V+D ++YLETS +AMT ++ A G+L E+ R W + + + NGT++G+C GTGIQ Y+ R T ++ ++ G +G V+ AA+ Sbjct: 211 LFFHGINTAPKTLSCCKWGRANGWSITASVEVLLTLTPFKESMKHEWNA-IMDSFRRHARGMVKHQSSDGRWHQLVDDDTSYLETSCTAMTISSIARAVNEGWLDRKEFEESLHRGWKGLETVLKSNGTISGVCRGTGIQAAPIDYKNRETTYLKTRNGGIGFVYHAAV 378
BLAST of mRNA_M-pyrifera_M_contig76834.18104.1 vs. uniprot
Match: UPI001B88C0C4 (unsaturated rhamnogalacturonyl hydrolase YesR-like isoform X1 n=3 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88C0C4) HSP 1 Score: 135 bits (340), Expect = 1.250e-34 Identity = 74/173 (42.77%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 34 NASLFFHGLNA-PSTPSCCFWGRAQGWAMMSAVEVLETMDAVAPSHPLRAP---LLEAFQRHAHGMLATQSSDGRWHQVVNDTSTYLETSVSAMTTWALLHAARSGYLP-STVRENAARAWTAVASQIMPNGTVNGICIGTGIQQNVQQYQQRPTPWVFSQPG-LGAVFLAAI 534 N LFFHG+N P T SCC WGRA GW++ ++VEVL T+ S L++ ++++F+RHA GM+ QSSDGRWHQ+V+D +++LETS +AMT ++ A G+L EN R W + + + +GTVNG+C+GTGI Y+ R T ++ ++ G +G V+ AA+ Sbjct: 208 NDGLFFHGMNTVPKTLSCCKWGRANGWSITASVEVLLTLIPFKES--LKSEWNAIMDSFRRHARGMVKHQSSDGRWHQLVDDDTSFLETSCTAMTLSSIARAVNEGWLDRKEFEENLHRGWKGLQTVLKADGTVNGVCVGTGILPAPIDYRNRGTSYIQTRNGGIGFVYHAAV 378
BLAST of mRNA_M-pyrifera_M_contig76834.18104.1 vs. uniprot
Match: UPI001B88BF5B (unsaturated rhamnogalacturonyl hydrolase YesR-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88BF5B) HSP 1 Score: 127 bits (320), Expect = 9.990e-32 Identity = 71/170 (41.76%), Postives = 109/170 (64.12%), Query Frame = 1 Query: 43 LFFHGLN-APSTPSCCFWGRAQGWAMMSAVEVLETMDAVAPSHPLRAP---LLEAFQRHAHGMLATQSSDGRWHQVVNDTSTYLETSVSAMTTWALLHAARSGYLP-STVRENAARAWTAVASQIMPNGTVNGICIGTGIQQNVQQYQQRPTPWVFSQPG-LGAVFLAAI 534 LFFHG+N +P SCC WGRA G+ M ++VEVL + S L++ ++++F++HA GM+ QSSDGRWHQ+V+D ++YLETS +AMT ++ A G+L + E+ R W + + + +GTVNG+C GTGIQ Y+ R T ++ ++ G +G V+ AA+ Sbjct: 211 LFFHGMNTSPMNMSCCKWGRANGYGMTASVEVLLALTPFKES--LKSEWDAIMDSFRKHARGMVKHQSSDGRWHQLVDDDTSYLETSCTAMTISSIARAVNEGWLERNEFEESLHRGWKGLETVLKADGTVNGVCRGTGIQAAPIDYKNRETTYLKTRNGGIGFVYHAAV 378
BLAST of mRNA_M-pyrifera_M_contig76834.18104.1 vs. uniprot
Match: A0A8J1UYQ7_OWEFU (Ofus.G23208 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UYQ7_OWEFU) HSP 1 Score: 123 bits (309), Expect = 4.260e-30 Identity = 67/170 (39.41%), Postives = 97/170 (57.06%), Query Frame = 1 Query: 46 FFHGLNAPS-TPSCCFWGRAQGWAMMSAVEVLE------TMDAVAPSHPLRAPLLEAFQRHAHGMLATQSSDGRWHQVVNDTSTYLETSVSAMTTWALLHAARSGYLP-STVRENAARAWTAVASQIMPNGTVNGICIGTGIQQNVQQYQQRPTPWVFS-QPGLGAVFLA 528 F HG NA + T SCC WGR GW +M++ E L + + P +L + H ++A QS DGRWHQV+N+TSTYLETS SAM L+ A G++ +T ++N W + + P+GTV+G+C+GTGI+ V Y+ RPT ++ GLG++ A Sbjct: 228 FNHGYNAKTNTRSCCKWGRGSGWILMASYEALTFKNQPWVKELGLHNDPKFDKVLSILRSHIKCIVANQSPDGRWHQVINETSTYLETSGSAMALSTLIRACMFGWVDYATYKQNVELGWQGLLKTVAPDGTVSGVCVGTGIESTVADYEARPTNYLLGGDGGLGSILYA 397
BLAST of mRNA_M-pyrifera_M_contig76834.18104.1 vs. uniprot
Match: A0A8J1UWU9_OWEFU (Ofus.G23208 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UWU9_OWEFU) HSP 1 Score: 124 bits (312), Expect = 9.070e-30 Identity = 68/170 (40.00%), Postives = 97/170 (57.06%), Query Frame = 1 Query: 46 FFHGLNAPS-TPSCCFWGRAQGWAMMSAVEVLE------TMDAVAPSHPLRAPLLEAFQRHAHGMLATQSSDGRWHQVVNDTSTYLETSVSAMTTWALLHAARSGYLP-STVRENAARAWTAVASQIMPNGTVNGICIGTGIQQNVQQYQQRPTPWVFS-QPGLGAVFLA 528 F HG NA + T SCC WGR GW +M++ E L + + P +L + H ++A QS DGRWHQV+N+TSTYLETS SAM L+ A G++ +T ++N W + + P+GTV+G+C+GTGIQ V Y+ RPT ++ GLG++ A Sbjct: 239 FNHGYNAKTNTRSCCKWGRGSGWILMASYEALTFKNQPWVKELGLHNDPKFDKVLSILRSHIKCIVANQSPDGRWHQVINETSTYLETSGSAMALSTLIRACMFGWVDYATYKQNVELGWQGLLKTVAPDGTVSGVCVGTGIQSTVADYEARPTNYLLGGNGGLGSILYA 408
BLAST of mRNA_M-pyrifera_M_contig76834.18104.1 vs. uniprot
Match: A0A3D0QG47_9BACT (Glycosyl hydrolase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3D0QG47_9BACT) HSP 1 Score: 120 bits (300), Expect = 8.460e-29 Identity = 63/177 (35.59%), Postives = 97/177 (54.80%), Query Frame = 1 Query: 1 LLDVGQYPGSSNASLFFH-GLNAPSTPSCCFWGRAQGWAMMSAVEVLETMDAVAPSHPLRAPLLEAFQRHAHGMLATQSSDGRWHQVVNDTSTYLETSVSAMTTWALLHAARSGYLPSTVRENAARAWTAVASQIMPNGTVNGICIGTGIQQNVQQYQQRPTPWVFSQPGLGAVFLA 528 +++ +Y L +H + P FWGRA GWAM++ V++L D + HP R LL +RH G+ Q ++G WHQ+++ + +YLETS +AM T+A+ + GY+ A R W V S+I P+G V G+C GT + ++ Y +RP P + G+GAV LA Sbjct: 243 VINFNKYAFDMRTGLMYHCWYSDVQRPGVAFWGRANGWAMLAQVDLL---DRLPKDHPSRDTLLSLLRRHILGLAKYQGAEGLWHQLLDKSDSYLETSCTAMFTYAIARSVNKGYIEPRYASIARRGWAGVMSRIRPDGQVEGVCEGTSVSDDLVYYYKRPAP-MNDIHGIGAVLLA 415
BLAST of mRNA_M-pyrifera_M_contig76834.18104.1 vs. uniprot
Match: A0A7X6NP53_9BACT (Glycosyl hydrolase n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7X6NP53_9BACT) HSP 1 Score: 120 bits (300), Expect = 8.460e-29 Identity = 64/183 (34.97%), Postives = 100/183 (54.64%), Query Frame = 1 Query: 1 LLDVGQYPGSSNASLFFHGLNAPS-TPSCCFWGRAQGWAMMSAVEVLETMDAVAPSHPLRAPLLEAFQRHAHGMLATQSSDGRWHQVVNDTSTYLETSVSAMTTWALLHAARSGYLPSTVRENAARAWTAVASQIMPNGTVNGICIGTGIQQNVQQYQQRPTPWVFSQPGLGAVFLAAIATAQ 546 +++ +Y L +H + + P FWGRA GWA+++ VE+L+ + A +P R LL F+RH G++ Q S G WHQ+++ ++LETS +AM T+A+ A GYL + + A + W V ++I P+G V GIC GT ++ Y RPTP + G+G V +A Q Sbjct: 243 VINFHKYLFDQEMGLMYHNWYSDTGKPGVAFWGRANGWAVLAQVELLDQLPA---DYPKRDTLLALFRRHIDGIVPYQDSTGLWHQLLDKPDSFLETSCTAMFTYAIARAVNQGYLEPSYKSFALKGWQGVLTKIRPDGQVEGICTGTSTSDDLSDYYTRPTP-LNDGHGIGTVLMAGTEIIQ 421
BLAST of mRNA_M-pyrifera_M_contig76834.18104.1 vs. uniprot
Match: R7VFJ7_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7VFJ7_CAPTE) HSP 1 Score: 117 bits (293), Expect = 5.820e-28 Identity = 75/184 (40.76%), Postives = 101/184 (54.89%), Query Frame = 1 Query: 10 VGQYPG---SSNASLFFHGLN-APSTPSCCFWGRAQGWAMMSAVEVLETMD---AVAPSHPLRAPLLEAFQRHAHGMLATQSS-DGRWHQVVNDTSTYLETSVSAMTTWALLHAARSGYLPST-VRENAARAWTAVASQIMPNGTVNGICIGTGIQQNVQQYQQRPTPWVFSQPGLGAVFLAAI 534 GQY G + L FHG N A + C WGRA GW MM+ VE+LE MD A+ S + L Q+H+ G+ QS DGRWHQV+++ ST+LETS +AM +++ A + G+L V AW + I +G V+GI GTGI N Y + T +V SQPGLG+V A + Sbjct: 203 AGQYAGYLFDTTDGLSFHGYNDADHKNAPCKWGRANGWGMMTHVEILEAMDHFPALRESESFKRQL-RLLQQHSAGLRHVQSKPDGRWHQVIDEASTFLETSATAMFVSSMIRAVKKGWLDRDYVGPVIFGAWEGLRKTIGEDGRVDGISCGTGIGTNASFYNGQSTEYVISQPGLGSVIHALV 385 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76834.18104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig76834.18104.1 >prot_M-pyrifera_M_contig76834.18104.1 ID=prot_M-pyrifera_M_contig76834.18104.1|Name=mRNA_M-pyrifera_M_contig76834.18104.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=188bp LLDVGQYPGSSNASLFFHGLNAPSTPSCCFWGRAQGWAMMSAVEVLETMDback to top mRNA from alignment at M-pyrifera_M_contig76834:392..955+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig76834.18104.1 ID=mRNA_M-pyrifera_M_contig76834.18104.1|Name=mRNA_M-pyrifera_M_contig76834.18104.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig76834:392..955+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig76834:392..955+ >mRNA_M-pyrifera_M_contig76834.18104.1 ID=mRNA_M-pyrifera_M_contig76834.18104.1|Name=mRNA_M-pyrifera_M_contig76834.18104.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1128bp|location=Sequence derived from alignment at M-pyrifera_M_contig76834:392..955+ (Macrocystis pyrifera P11B4 male)back to top |