mRNA_M-pyrifera_M_contig766.18049.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig766.18049.1
Unique NamemRNA_M-pyrifera_M_contig766.18049.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig766.18049.1 vs. uniprot
Match: A0A6H5K4C0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4C0_9PHAE)

HSP 1 Score: 384 bits (986), Expect = 1.590e-129
Identity = 197/263 (74.90%), Postives = 225/263 (85.55%), Query Frame = 1 
Query:    1 AARKSGAGAHMLAGQEFATCSEDDFRAYIIGWTLVWSGIIPYTIVAAK---NVLGEVVSVKALPSVSKGEDATISNQSLLLYKDPIKLIDIVNIVGRFQTFDDVQTGKKESGAMSDFLFRETFKAREKIRNLDLRRAKFKGWPNGPDGQPALEKAFGGDVKAVTKSMAKRELSESAMDAVFDSFVGSPLSIVADRFKVDNQLESWRKDNSFSVKGFERGLLKGRLLFLFTVVSVVALELAGYSVFFVEPLIIRYGNPLSFLGF 780
            AA  S   A MLAGQ+FATCSE DFRAYIIGWT VWSGIIPYT +A+K   NVLGEV+  KA  +V +GEDATISNQSLLLYKDPIKL+DIVNIVGRFQTFDDVQ   K+ G MSD+LFR TFK        +LRR+KFKGWP GPDGQPAL+ AFGGDVKAV+++MAKRELS++AMDAVFDSFVGSPLS+VADRFKVDNQL++WRKDN+F +KGFE+GLL GRLLFLFT+VS+V L LAGY VFFV+P+IIRYGNPL+FLGF
Sbjct:   60 AASPSRGSARMLAGQDFATCSEADFRAYIIGWTFVWSGIIPYTFIASKAIQNVLGEVIGFKARSTVKEGEDATISNQSLLLYKDPIKLLDIVNIVGRFQTFDDVQD--KKGGVMSDYLFRNTFKE-------NLRRSKFKGWPAGPDGQPALKDAFGGDVKAVSRTMAKRELSDTAMDAVFDSFVGSPLSLVADRFKVDNQLDNWRKDNTFDIKGFEQGLLVGRLLFLFTIVSLVGLLLAGYGVFFVQPIIIRYGNPLAFLGF 313
[Close]
BLAST of mRNA_M-pyrifera_M_contig766.18049.1 vs. uniprot
Match: A0A835YTS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTS8_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.130e-47
Identity = 96/231 (41.56%), Postives = 144/231 (62.34%), Query Frame = 1 
Query:   64 EDDFRAYIIGWTLVWSGIIPYTIVAAKNVLGEVVSVKALPSVSKGEDATISNQSLLLYKDPIKLIDIVNIVGRFQTFDDVQTGKKESGAMSDFLFRETFKAREKIRNLDLRRAKFKGWPNGPDGQPALEKAFGGDVKAVTKSMAKRELSESAMDAVFDSFVGSPLSIVADRFKVDNQLESWRKD-NSFSVKGFERGLLKGRLLFLFTVVSVVALELAGYSVFFVEPLIIRY 753
            +++F   +    L + GI+PYTI+A K++  +V   +ALP+V  GE+ T+SNQ LLLY +PI+LID++NIV RF++FD++Q   ++ G  S++L RE FK  +K+  L       K WP   +G P  +  F     A  K+   +E+ +SA+D VFD F GS  + +ADRFKV+  L+SWR D  SF+V  FE+ LL  R   LF    ++ L+LA +SVFF+ PL +R+
Sbjct:   11 QNEFNTVVGFMALAFQGILPYTIMANKSIFSDVGGFRALPAVKTGEEVTVSNQPLLLYGEPIRLIDVINIVSRFESFDELQDELRDDGNRSNYLRREYFK--QKVLTLAP-----KAWPADENGVPVGQDMFASTSVATLKN---KEIRDSALDVVFDVFSGSSRAYIADRFKVEYNLDSWRPDARSFNVAAFEKDLLVTRYSILFIYAVLLLLQLACWSVFFINPLALRF 231
[Close]
BLAST of mRNA_M-pyrifera_M_contig766.18049.1 vs. uniprot
Match: A0A7S2USE2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USE2_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 7.060e-20
Identity = 64/169 (37.87%), Postives = 86/169 (50.89%), Query Frame = 1 
Query:  166 SVKALPSVSKGEDATISNQSLLLYKDPIKLIDIVNIVGRFQTFDDVQTGKKESGAMSDFLFRETFKAREKIRNLDLRRAKFKGWPNGPDGQPALEKAFGG-DVKAVTKSMAKRELSESAMDAVFDSFVGSPLSIVADRFKVDNQLESWRKDNSFSVKGFERGLLKGRLL 669
            S  AL  +S  E  T+ N  LL Y + +KL+D+VN+VGRFQ +D V          +  L RE FK +       +R+ KFK WP    GQ    K F   D     K +   ELSE A+DAVFD+F  +  S   +R K + Q   WR+ + F V+ FE  LLK  L+
Sbjct:   64 SSHALMFMSDAESLTVKNNGLLKYGEDVKLLDVVNVVGRFQGWDGVWEQPPPGTFFASGLSRERFKDK-------VRKEKFKSWPKDSSGQSVAAKLFPELDGPKGVKQVDSMELSEVALDAVFDTF--NSASSHTERRKAEEQFAQWRQGDVFDVEAFESNLLKANLI 223
[Close]
BLAST of mRNA_M-pyrifera_M_contig766.18049.1 vs. uniprot
Match: A0A7S0KA49_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KA49_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 9.810e-13
Identity = 68/230 (29.57%), Postives = 106/230 (46.09%), Query Frame = 1 
Query:  112 GIIPYTIVAAKNVLGEVV---------SVKALPSVSKGEDATISNQSLLLYKDPIKLIDIVNIVGRFQTFDDVQTGKKESGAMSDFLFRETFKAREKIRNL---DLRRAKFKGWPNGPDGQPALEKAFGGDVKAVTKSMAKRELSES-------AMDAVFDSFVGSPLSIVADRFKVDNQLESWRKDNSFSVKGFERGLLKGRLLFLFTVVSVVALELAGYSVFFVEPLI 744
            G+IP  I A K +LG ++         SV  + + +      I N  LL  ++P+KL D+V IVGR +    V   K    A  D L           R +   ++R AKF GWP      P+  +  GG      KS  +RE+S+        A+DAVFD++     S +A   KVD QL++WR +N F +  F    + GR +    +++ + +++  Y   FV P +
Sbjct:   86 GLIPPAIAANKLMLGTILGQRAGGDDDSVAKVSTSASSVSPDIPNSKLLFAREPVKLADVVAIVGRIRDVQSVADWKNLPSAKRDNLIDPENPPMWLPRGMFKDNIRNAKFVGWPV----DPSTGEVVGG---IELKSEFEREVSKKSYPIPDVALDAVFDTWAWG--SGIATPDKVDVQLQAWRSNNGFDLNKFASAAVAGRSVTGAAILTFITIQVMVYGCLFVAPFL 306
[Close]
BLAST of mRNA_M-pyrifera_M_contig766.18049.1 vs. uniprot
Match: A0A7S1BLB2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BLB2_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.550e-8
Identity = 54/211 (25.59%), Postives = 103/211 (48.82%), Query Frame = 1 
Query:  184 SVSKGEDATISNQSLLLYKDPIKLIDIVNIVGRFQTFDDV---------QTGKKESGAMSDFLFRETFKAREKIRNLDLRRAKFKGWPNGPDGQPALEKAFGGDVKAVTKSMAKR---ELSESAMDAVFDSF-VGSPLSIVADRFKVDNQLESWRKDN-SFSVKGFERGLLKGRLLFLFTVVSVVALELAGYSVFFVEPLI-IRYGNPLSF 771
            S S     T+S   LL   +P+KL+D++ ++GR    +DV         +     S     +L R T+K       +++R AK++GWP   DG P      GG+++   +   ++   E+S++A+D VFD++ +G+    VA   KV   L S+ K N +F +  F+   + GR +    ++  + +++  +   F+ P + + +G  + F
Sbjct:  149 SDSGASGPTLSCSPLLFSGEPVKLVDVLAVIGRISDVNDVARWSDLPSTKLPNVSSNNPPQWLPRNTYK-------VNIRAAKWRGWPVNADGSPI----GGGELQRSEEKRLRQKGAEISDAALDVVFDTWALGAG---VATPDKVSEALSSYLKSNGTFDLGKFQSAAVLGRAVTAAAILFFLVIQVIAFGTLFIAPFLRVFFGIDIGF 345
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig766.18049.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K4C0_9PHAE1.590e-12974.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YTS8_9STRA1.130e-4741.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2USE2_9STRA7.060e-2037.87Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0KA49_9STRA9.810e-1329.57Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7S1BLB2_9STRA1.550e-825.59Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig766contigM-pyrifera_M_contig766:24454..30499 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-20_002020.1
Exons7
Model size1223
Cds size753
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816664.9561987-UTR-M-pyrifera_M_contig766:24453..248931622816664.9561987-UTR-M-pyrifera_M_contig766:24453..24893Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig766 24454..24893 -
1692278106.6244383-UTR-M-pyrifera_M_contig766:24453..248931692278106.6244383-UTR-M-pyrifera_M_contig766:24453..24893Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig766 24454..24893 -
1622816665.0504348-UTR-M-pyrifera_M_contig766:30469..304991622816665.0504348-UTR-M-pyrifera_M_contig766:30469..30499Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig766 30470..30499 -
1692278106.7250817-UTR-M-pyrifera_M_contig766:30469..304991692278106.7250817-UTR-M-pyrifera_M_contig766:30469..30499Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig766 30470..30499 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816664.9662657-CDS-M-pyrifera_M_contig766:24893..249271622816664.9662657-CDS-M-pyrifera_M_contig766:24893..24927Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig766 24894..24927 -
1692278106.6349282-CDS-M-pyrifera_M_contig766:24893..249271692278106.6349282-CDS-M-pyrifera_M_contig766:24893..24927Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig766 24894..24927 -
1622816664.976347-CDS-M-pyrifera_M_contig766:25416..254971622816664.976347-CDS-M-pyrifera_M_contig766:25416..25497Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig766 25417..25497 -
1692278106.6455572-CDS-M-pyrifera_M_contig766:25416..254971692278106.6455572-CDS-M-pyrifera_M_contig766:25416..25497Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig766 25417..25497 -
1622816664.990359-CDS-M-pyrifera_M_contig766:25907..260001622816664.990359-CDS-M-pyrifera_M_contig766:25907..26000Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig766 25908..26000 -
1692278106.6565647-CDS-M-pyrifera_M_contig766:25907..260001692278106.6565647-CDS-M-pyrifera_M_contig766:25907..26000Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig766 25908..26000 -
1622816665.0022073-CDS-M-pyrifera_M_contig766:26483..266691622816665.0022073-CDS-M-pyrifera_M_contig766:26483..26669Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig766 26484..26669 -
1692278106.6742363-CDS-M-pyrifera_M_contig766:26483..266691692278106.6742363-CDS-M-pyrifera_M_contig766:26483..26669Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig766 26484..26669 -
1622816665.0146947-CDS-M-pyrifera_M_contig766:28475..285741622816665.0146947-CDS-M-pyrifera_M_contig766:28475..28574Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig766 28476..28574 -
1692278106.686539-CDS-M-pyrifera_M_contig766:28475..285741692278106.686539-CDS-M-pyrifera_M_contig766:28475..28574Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig766 28476..28574 -
1622816665.0266647-CDS-M-pyrifera_M_contig766:29917..300631622816665.0266647-CDS-M-pyrifera_M_contig766:29917..30063Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig766 29918..30063 -
1692278106.6994376-CDS-M-pyrifera_M_contig766:29917..300631692278106.6994376-CDS-M-pyrifera_M_contig766:29917..30063Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig766 29918..30063 -
1622816665.0377843-CDS-M-pyrifera_M_contig766:30355..304691622816665.0377843-CDS-M-pyrifera_M_contig766:30355..30469Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig766 30356..30469 -
1692278106.7130375-CDS-M-pyrifera_M_contig766:30355..304691692278106.7130375-CDS-M-pyrifera_M_contig766:30355..30469Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig766 30356..30469 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig766.18049.1prot_M-pyrifera_M_contig766.18049.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig766 24894..30469 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig766.18049.1

>prot_M-pyrifera_M_contig766.18049.1 ID=prot_M-pyrifera_M_contig766.18049.1|Name=mRNA_M-pyrifera_M_contig766.18049.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=251bp
MLAGQEFATCSEDDFRAYIIGWTLVWSGIIPYTIVAAKNVLGEVVSVKAL
PSVSKGEDATISNQSLLLYKDPIKLIDIVNIVGRFQTFDDVQTGKKESGA
MSDFLFRETFKAREKIRNLDLRRAKFKGWPNGPDGQPALEKAFGGDVKAV
TKSMAKRELSESAMDAVFDSFVGSPLSIVADRFKVDNQLESWRKDNSFSV
KGFERGLLKGRLLFLFTVVSVVALELAGYSVFFVEPLIIRYGNPLSFLGF
*
back to top

mRNA from alignment at M-pyrifera_M_contig766:24454..30499-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig766.18049.1 ID=mRNA_M-pyrifera_M_contig766.18049.1|Name=mRNA_M-pyrifera_M_contig766.18049.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6046bp|location=Sequence derived from alignment at M-pyrifera_M_contig766:24454..30499- (Macrocystis pyrifera P11B4 male)
GCGGCACGAAAGAGCGGCGCCGGGGCGCACATGTTAGCCGGCCAGGAGTT
CGCCACTTGCTCTGAGGACGACTTCCGCGCGTACATCATCGGATGGACGT
TGGTGTGGAGCGGCATCATCCCCTACACCATTGTCGCCGCCAAGGTATGT
ACGAGCGGCCGTACGACATAGTACAATAAGTGTGTCAGGGAGCATCGATG
AAGCGGTGCGTCTATAATAGCGCGCCATGATAACCGTGCGCTAGATATAC
CTGGTATGGCATACTGTAGCGGAATTACGGAATGCGGATGTTGACGACAC
AGATCTGCTCCAAAAGTAGGTGTTTCTACTTTTGTACTTACCGGCAGCTC
TTTTCTAAAGCACCCGTGCACAACCCCGCTACTTTATCGTGCGTACACCT
CGTGTTCGTTTTCGTGCGAAACGGGACGAACCGCAGAACGTTCTCGGCGA
AGTCGTGAGCGTGAAGGCTCTGCCGTCAGTGTCGAAGGGGGAAGACGCCA
CCATCTCGAACCAGTCCCTGCTGCTCTACAAAGACCCCATCAAGCTGATC
GACATCGTCAACATTGTCGGCCGCTTCCAGACGTGAGTGCCTGATTGTCT
TTCGTGGGATCGCGTTGACCGCTACTCTCACTGTGGGCGCGAACACCGCA
GGGTGACATTTCGCGACAATTTTTGTTTCTCGAGTCGAGTTATTCAAGCC
TGTCGCAGCTCTCGTGTTGGTTGGAGGCGGATCGTGTTATTCCCGCGATT
GCTCGGAGCGTTGACTGTATGAACACAACCTACAAAAAAATTCCACTCGG
TCCGATAACATACGCACCGTTTCTACACTTAATTGTGAAACCAAACTTTG
CTCCTGTTTCGTCTGCCCGAATTCGGCATTTATATCATTACCTCTATTTC
CATTACGGGGGTCCATATTTAATAGGACCTATGGTATACATAAAACCTAT
ATATTTACCTATTTTTACTAACTTTGGTCCTATTTACCATGGTCCTCCGT
AATAGTACGACTTAAAAACTCAACTATTCGTACGTAGTACGTAGATGATG
CCACTACAGGCACTTGTATATACTGTAGTTTCGGGACAGAATAGAAGGTG
GCTTTTCGTAACCCTCTCAAGAATGCAGTCCCGTTTAGGTGACAAACTAG
TTACAGTAGAATTTGAGTGGTTTGTCTCCGAAACGGGACTAGCTGCAGTC
CGAAATGGTTCAAGTCGCAGGCAGCACCGACCATGACCGTGGCGCCGTAG
GTCGCATCTCCCGTGCTTAACCTTCACCGAGGCAAGTGCGTGGGCTAAAC
CGTACGCCGCCACCGCCGTCCTCCTTTTTCACCACTGAGCTTGTCGAAAT
CGCCCTTGTATTCCAAGATCGCGGCAAGCGAACGCTTCTGGTCCTCGCGT
GAGGCTCGGTGCGCCTCCAAACGCACAATAGCGCGCGTCACTCTGGCACG
GCGTAGTTGTTGCCTGTTTCTCCATACTGTCGCATGCGTGACGGGTGTGG
GATGAGTAGTCGCACGGTGGGAGCACGCCGTCAACGATGGTTAACCCTTG
TGTTTTACGCCATGCTGCCGCATATCGACGACTAGCGAGGATCATGCTGG
GATTACAAGCGTCGAACCAGAAGCAGCCGAGCTGGCGCGATAATCCATTG
TCGTGGCTCCCTGCTGCGTTCGGACCGCGGCAGAAACGAAGCATCGTATA
CACATGGCAGCATATGGCTTACTGATACGAGTAGCACGGTCGGTTGTTCT
GTCAGGCAGGCCATCGCGTACGGGGCTTTTTTTTCAGGTCTGAGGCGGGT
GTGGGGTGAGCTGTTCCGCAGACGCCCTACGTGTAAACCGCAAAACATTC
CGACAACATATCGTGTCCCCTTTATTTTGGCGCGTGGTTTTTTTCTTGTC
CTCGTGTTTTGTGCTTGCTCCGCAGTTTCGACGACGTGCAGACGGGCAAG
AAGGAGTCGGGCGCCATGAGCGACTTCCTCTTCAGAGAAACTTTCAAGGC
GAGAGAGAAAATTCGAAACTTGGAGTGTTAACAATTATGTCTGACACCGA
GACTTGCTCGGCAGTTTCGACGACGTGCAGACGAGCAAGAAGGCGTCGGG
CGTCATGAACTGAGAGCTTTTTTTACGAGCACCATATCAACGAATGTCCT
TTGCACCACATGGCGGCACGGGTGTACAAATTGAACCGATGCCAGGCGGG
AACAAACCTTCCCACCCTGCTCGACGTGTTGCCTTCAATGACCTCTCTGA
AGGGTCTGCGCTGGGATGTTATGCCGCAGAAAAACTAACGACGCTCGCAG
TCTTATCGTGGAAAAACTAGCGACGCTCACTATTAATCGTAGAATAACCA
ACGACTCTCACGATCGACCGCCGGACTGCCTCGTCGTGCGATCTCTACGA
CCAATATGTCACGTACATCGAGTCGTCGCTCCCACCCCCCCGTTGATTTA
GAAGGGAAGGTGATTCCACGGACTCACTTCGCTAGGTCTGGATTCTACCT
TTCCCCATCTCCTGTGCAGAACGTGTACTGTGCTCGGCGCGGATTTGGAG
TCCACACCCCTCGCAGAGCACAGTACATGTCCTGCGCAGGCGATGGGGAA
AAGTAGCTTATAGACCTACAGTAGTGAAAGGAGTTTTTGGAATAACCTTC
CCTTATTGGTCGATGGCCAAGTCCCCTTCCTAGTCAACCGGGGTGTGGAA
ACGAACGACGAGTCGATTTCTGGGATATATGGGTCGCAGAAGGCGCACGA
CGAGGCAGTCCGGCGGTCAGCCGTGAGTATCGTTAGATTTGTTTACGGCA
CAGCTCAGCGCAAACTCTTTCAGGAACCCGTTGAATGCAACATCGGTTCG
TTTTGGACACCCCACTGTGGTGTTTGGCACTTACACGTTGATATCGCCAA
GGAGGCGCGGGGGCGGGGGGGGGGTAAACATCAACATCAAGACGGATTCG
CCGCCGCTCAGAGTAACCTCACGCAGGATCGAGGAGGGAAATAAAATAGA
GTGGGGGAAGTGATGTACGTTGGCGATGCGGGGCATCCCTGCGGCGGGGA
TCAGAGCTGAGTTACTGTTGTTGACCGGCCTGATATCCATAAACTTAGCG
ACTCATTGGACGCATGCCCTTGCATGTTTTGGTGGTTTTTGCTCAGTAGT
TTTGGAGCATTACTCTGTGGAGTGTACCCCTAAGGAGACGTCGCGAGGGG
GTTCTGTACCTTGAGGCGCGACGCGGTTTCCGTGTCGCCGCCGCCAGGTG
GAGGGCGATTGCGACTGCAAACGAACGGCACGACCTTTCGTTTAGTACCC
AGTGCTATTGATATCGCCATGAGGAACTTTGAAGCCCATTCTCGGCGGGA
ACGCTCTCTGCTCAAGCTTCCAATATCACACACAACCTTATGGCATGCGC
ACCGTCCTACCCACCTTTAATGAGGCTTCTTCGCGGGCGCTGCCACTGCG
GACAGCCGCGTCCGTGACCTAAACCGCACCTGGTAGAATAAAGGAGGTGA
AAATAGAGGGGGGCCCCCTCGTCCTAGCACGGCTCCCGGTAGCTGAAACA
ACGGCGTATCTACGCCGTCGAAGTATTCGCACCCGTTTTAGGCGTGTACC
CGCACGGAGATCCATAGAAGAAGTCCTTTTGTTCCGTTCGGCACTTTGGC
CGCCTTTTTGTGTTAGAGGCTGGTCTTCGCCAGGTACCGTCGCGTTTCAC
TGCAACAGCAGTTGCGAAACTTCTGTGGTTTACACGTTCAGGGACAGGGA
ACTCGCAGAACGAAACCGGTGCGGACGGCCCCACGACTCCCCTCCAATCG
CATCGCTCTTGCCGTTTTGACACAGGAGAGCCTCCGGCGGGCAAAATTTA
AAGGGTGGCCGAACGGTCCTGACGGGCAGCCCGCCCTTGAGAAAGCTTTC
GGCGGCGATGTGAAGGCGGTGACGAAAAGCATGGCCAAGCGTGAGCTCTC
GGAGAGTGCGATGGACGCGGTCTTCGACAGCTTCGTCGGCAGCCCGCTGT
CCATCGTCGCCGATAGGTGAGGTGCAAAAAAGGCAGAAGGGGCCACGTGA
AGCTCGCATCGTGACGCAAGTGGACCTACTGTAGCGCAACCCAATCCAGC
CCAAGCCAAGCCAACACAACACAGCACAATACTCGTGTTTTTTAATTCAA
TTATTTTTTCACGAGCTGCCCCCTTAGTCTCTGTATCATACGAACAGTTT
TCCGGCCTACGTTCGAATACAGCTTGAATTAGCAGCTGTGCTCGTGGCAT
ATACACAGCCAGAAAGTGGCAGTAGTACTCGTGACGTCTGGTTACTGCTC
GCCGACCTGCGAACATATCATACCCCCTTCGGTTAGCGCCAGGCGTAGGT
TTCCATTCCTTGTTTTTCGCTTTTGTGTGTGTAATTTTTGTGTACGGCAT
TGCTTGCGACGTAGACGCTTACATGAAGGAACCCCTCAGTGGACCATCCT
GATTCCCACAGTATGTGCTGCCTTTTTTCTCGCGGGGGGTGTGTGGCAGG
TTCAAGGTGGACAACCAGCTTGAAAGTTGGCGCAAGGACAACAGCTTCAG
CGTGAAGGGCTTTGAGCGGGGCTTGCTCAAGGGACGATTGCTGTGAGTTT
ATTTTTGAATCCTGTGAGGACCTTGATTCCTTTTTTTTTTTTTTTCAAGA
TGTTGCGTTGAAGTTCGATGGTTTTCGGGAACTTGGCAGTTGTTTTTCGT
GCGCTCGTCTATCGATGCTGAGATAGGATTCCCAAGAACCTACATACCGC
ATGTGATTTATCGTCTACGTGGTGGATCGTCCCAGAAAATGTCCACGTAT
GATTGGATTTCGTCGTACACCCAGTAGGAAACGACACCATCTACGAACGA
CTCTGTGGTCCTATCTGAGGTTCACCTGGTGCGAACGATAACACTGTTGT
TTGGCGTGCATGGACAAGGACCCAACTGGCAACCCCGTACGTGGATGAGG
AAGACGGCAGTTATACTTTCGCGCGCCTGTCTCTTGACGAAATACCCGAC
AGGTTCCTATTTACCGTGGTGAGCGTCGTTGCCCTGGAGCTTGCTGGGTA
CAGCGTCTTCTTCGTCGAGCCGCTCATCATCCGGTGAGTTGTGGATTTTT
CGCTCGCGTGTGCCGACAATGAGTCAAGACAGTCTGCAGTAGTACTGCTG
TGCATTTTACGGTCGATGAAGGTCGACGAACTGGTGTGGGCATGCCGTGC
GGTACCCGCGATAGAAACCGAGGCAAGTACCGGGGAGATGAGGAGGGGGG
GCGGCGGGTGACCGTGACCACGCCTTTTGTAGAAAGTCACCGAGCGCAAA
ATACTCGTGCGAGTTGGGCTGGAACTAAATTAAGCTACGAAAGGGATGAA
AACACGACGTTGCCGAGTGATTCGGGGGCATCGTCCACAGTACTAGCGAC
CGTGCAGCGTCGCGGCTATGGAGGCATCTATGGACTCGTCTCTCTTTCGA
ACAATCTCAAAACCGCTTTTTGCGACGGGATATGTCCGCTCTCAGTCACA
CACTTCAACTCTGACGTCGCGAACAAACATGCCTTTCCTACCGACTCTTA
TACTTCGCCTTTTTTTCTGCAGGTACGGAAACCCTCTCTCCTTCCTGGGC
TTCTAGACGAGGTGGAGAGGGCCTCTAGAGGAAGGCAGCAAAAAGTTTGT
TCGGGTTTTGCGCGGAGAAAGCGGGACATGCTATCCTGGGAGTGTGAGGC
GTGAGAACGCGCCGTCCGGACTCTGTCGCTGGGCACGTCGGTTGCGCTAT
ATTGTCGGTCGCCTTGGACTGTGGATAAAAACAGATTTAGTCGTGGGAAG
TTGGTTGTAGTAAACACCTGTGTCGTGGTCGTATGGCGCAAGGAGAGGCC
CATCGTGCATGGTGTCAGACCGTACAAACTTCAGGGGCGTTCACTATCCG
GCCTTTGGTGCGGTATGTAGCGATCCCACAATTTTCAAGTGTGATGGTTT
GCCTCAAAACAAATTGATTCTGCTCGGCGAACGGAAATCGCGGGCCGTAG
GGGCACGTGCAGACGGTGTTGTGTGCTCAGAACATGAACCGGTGGG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig766:24454..30499-

>mRNA_M-pyrifera_M_contig766.18049.1 ID=mRNA_M-pyrifera_M_contig766.18049.1|Name=mRNA_M-pyrifera_M_contig766.18049.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1506bp|location=Sequence derived from alignment at M-pyrifera_M_contig766:24454..30499- (Macrocystis pyrifera P11B4 male)
ATGTTAGCCGGCCAGGAGTTCGCCACTTGCTCTGAGGACGACTTCCGCGC
GTACATCATCGGATGGACGTTGGTGTGGAGCGGCATCATCCCCTACACCA
TTGTCGCCGCCAAGATGTTAGCCGGCCAGGAGTTCGCCACTTGCTCTGAG
GACGACTTCCGCGCGTACATCATCGGATGGACGTTGGTGTGGAGCGGCAT
CATCCCCTACACCATTGTCGCCGCCAAGAACGTTCTCGGCGAAGTCGTGA
GCGTGAAGGCTCTGCCGTCAGTGTCGAAGGGGGAAGACGCCACCATCTCG
AACCAGTCCCTGCTGCTCTACAAAGACCCCATCAAGCTGATCGACATCGT
CAACATTGTCGGCCGCTTCCAGACAACGTTCTCGGCGAAGTCGTGAGCGT
GAAGGCTCTGCCGTCAGTGTCGAAGGGGGAAGACGCCACCATCTCGAACC
AGTCCCTGCTGCTCTACAAAGACCCCATCAAGCTGATCGACATCGTCAAC
ATTGTCGGCCGCTTCCAGACTTTCGACGACGTGCAGACGGGCAAGAAGGA
GTCGGGCGCCATGAGCGACTTCCTCTTCAGAGAAACTTTCAAGGCGAGAG
AGAAAATTCGAAACTTGGATTTCGACGACGTGCAGACGGGCAAGAAGGAG
TCGGGCGCCATGAGCGACTTCCTCTTCAGAGAAACTTTCAAGGCGAGAGA
GAAAATTCGAAACTTGGACCTCCGGCGGGCAAAATTTAAAGGGTGGCCGA
ACGGTCCTGACGGGCAGCCCGCCCTTGAGAAAGCTTTCGGCGGCGATGTG
AAGGCGGTGACGAAAAGCATGGCCAAGCGTGAGCTCTCGGAGAGTGCGAT
GGACGCGGTCTTCGACAGCTTCGTCGGCAGCCCGCTGTCCATCGTCGCCG
ATAGCCTCCGGCGGGCAAAATTTAAAGGGTGGCCGAACGGTCCTGACGGG
CAGCCCGCCCTTGAGAAAGCTTTCGGCGGCGATGTGAAGGCGGTGACGAA
AAGCATGGCCAAGCGTGAGCTCTCGGAGAGTGCGATGGACGCGGTCTTCG
ACAGCTTCGTCGGCAGCCCGCTGTCCATCGTCGCCGATAGGTTCAAGGTG
GACAACCAGCTTGAAAGTTGGCGCAAGGACAACAGCTTCAGCGTGAAGGG
CTTTGAGCGGGGCTTGCTCAAGGGACGATTGCTGTTCAAGGTGGACAACC
AGCTTGAAAGTTGGCGCAAGGACAACAGCTTCAGCGTGAAGGGCTTTGAG
CGGGGCTTGCTCAAGGGACGATTGCTGTTCCTATTTACCGTGGTGAGCGT
CGTTGCCCTGGAGCTTGCTGGGTACAGCGTCTTCTTCGTCGAGCCGCTCA
TCATCCGGTTCCTATTTACCGTGGTGAGCGTCGTTGCCCTGGAGCTTGCT
GGGTACAGCGTCTTCTTCGTCGAGCCGCTCATCATCCGGTACGGAAACCC
TCTCTCCTTCCTGGGCTTCTAGGTACGGAAACCCTCTCTCCTTCCTGGGC
TTCTAG
back to top