mRNA_M-pyrifera_M_contig75315.17777.1 (mRNA) Macrocystis pyrifera P11B4 male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75315.17777.1 vs. uniprot
Match: A0A6H5LET2_9PHAE (Acyltransf_C domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LET2_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 3.610e-17 Identity = 39/62 (62.90%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 13 QGRPELMRLLLPHTTALAASLDGLRPAKPVIYDVTLAASGYSGEIPCG--PPPSDWEALKGI 192 + RPEL LLLPHTTAL+A LDGLR AKPV+YD TLAA Y+GEIP PP+DW+ L+ + Sbjct: 125 EDRPELTHLLLPHTTALSACLDGLRQAKPVVYDFTLAADAYTGEIPPARRSPPTDWDVLRAL 186
BLAST of mRNA_M-pyrifera_M_contig75315.17777.1 vs. uniprot
Match: D7FLT9_ECTSI (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT9_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 9.030e-16 Identity = 38/62 (61.29%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 13 QGRPELMRLLLPHTTALAASLDGLRPAKPVIYDVTLAASGYSGEIPCG--PPPSDWEALKGI 192 + RPEL LLLPHTTAL+A LDGLR AKPV+YD TLAA Y GEIP P +DW+ L+ + Sbjct: 357 EDRPELTHLLLPHTTALSACLDGLRQAKPVVYDFTLAADAYMGEIPPARRSPSTDWDVLRAL 418
BLAST of mRNA_M-pyrifera_M_contig75315.17777.1 vs. uniprot
Match: A0A7S1UNY8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNY8_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.450e-9 Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 1 Query: 13 QGRPELMRLLLPHTTALAASLDGLRPAKPVIYDVTLAASGYSGEI 147 +GRP+L LLLP TT ASLD L A PV+YDVTLA SGY G++ Sbjct: 101 EGRPQLQHLLLPRTTGFNASLDSLGEANPVVYDVTLAYSGYRGQM 145
BLAST of mRNA_M-pyrifera_M_contig75315.17777.1 vs. uniprot
Match: I6R0X4_PHATR (Lysophosphatidic acid acyltransferase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=I6R0X4_PHATR) HSP 1 Score: 59.7 bits (143), Expect = 7.400e-9 Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 1 Query: 13 QGRPELMRLLLPHTTALAASLDGLRPAKPVIYDVTLAASGYSGEIPCGPP---PSDWEALKGI 192 +GRP+L LLLP ASL+ LR + PV+YDVT+A SGY+G +P P+ W+ L+G Sbjct: 310 EGRPQLKHLLLPRARGFNASLECLRESSPVVYDVTMAYSGYNGSLPPSIELTFPALWKLLRGF 372
BLAST of mRNA_M-pyrifera_M_contig75315.17777.1 vs. uniprot
Match: A0A4D9D5I2_9STRA (PlsC domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5I2_9STRA) HSP 1 Score: 49.3 bits (116), Expect = 3.440e-5 Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 1 Query: 13 QGRPELMRLLLPHTTALAASLDGLRPAK----PVIYDVTLAASGYSGEIP 150 Q RP L LLLP +T AA L+ + + P+IYD+T+A GYSGE+P Sbjct: 137 QSRPHLKHLLLPRSTGFAACLETMCQSSTAPPPLIYDLTVAYGGYSGEVP 186
BLAST of mRNA_M-pyrifera_M_contig75315.17777.1 vs. uniprot
Match: W7THY1_9STRA (Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THY1_9STRA) HSP 1 Score: 49.3 bits (116), Expect = 3.480e-5 Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 1 Query: 13 QGRPELMRLLLPHTTALAASLDGLRPAK----PVIYDVTLAASGYSGEIP 150 Q RP L LLLP +T AA L+ + + P+IYD+T+A GYSGE+P Sbjct: 285 QSRPRLKHLLLPRSTGFAACLETMCQSSTAPPPLIYDLTVAYGGYSGEVP 334
BLAST of mRNA_M-pyrifera_M_contig75315.17777.1 vs. uniprot
Match: A0A1V9YF22_9STRA (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YF22_9STRA) HSP 1 Score: 48.5 bits (114), Expect = 6.380e-5 Identity = 24/48 (50.00%), Postives = 30/48 (62.50%), Query Frame = 1 Query: 13 QGRPELMRLLLPHTTALAASLDGLRPA--KPVIYDVTLAASGYSGEIP 150 Q RP+L ++LP + L LD KP IYDVT+A SGYSGE+P Sbjct: 187 QQRPQLQHVMLPRSAGLQLLLDAYAHTSIKPEIYDVTVAYSGYSGEVP 234 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75315.17777.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75315.17777.1 >prot_M-pyrifera_M_contig75315.17777.1 ID=prot_M-pyrifera_M_contig75315.17777.1|Name=mRNA_M-pyrifera_M_contig75315.17777.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=54bp MRLLLPHTTALAASLDGLRPAKPVIYDVTLAASGYSGEIPCGPPPSDWEAback to top mRNA from alignment at M-pyrifera_M_contig75315:201..392+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75315.17777.1 ID=mRNA_M-pyrifera_M_contig75315.17777.1|Name=mRNA_M-pyrifera_M_contig75315.17777.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=192bp|location=Sequence derived from alignment at M-pyrifera_M_contig75315:201..392+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75315:201..392+ >mRNA_M-pyrifera_M_contig75315.17777.1 ID=mRNA_M-pyrifera_M_contig75315.17777.1|Name=mRNA_M-pyrifera_M_contig75315.17777.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=324bp|location=Sequence derived from alignment at M-pyrifera_M_contig75315:201..392+ (Macrocystis pyrifera P11B4 male)back to top |