mRNA_M-pyrifera_M_contig74975.17713.1 (mRNA) Macrocystis pyrifera P11B4 male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig74975.17713.1 vs. uniprot
Match: A0A5A8D0H1_CAFRO (JmjC domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D0H1_CAFRO) HSP 1 Score: 221 bits (564), Expect = 2.170e-64 Identity = 118/281 (41.99%), Postives = 164/281 (58.36%), Query Frame = 1 Query: 1 SMLCVLEGTKVVYLVEPRWSRWLYADRASLVGVSPIDPLHLDLKAFPLAAEVPFTVATVQAGDCLYLPQNWWHFVXXXXXXXXXXXXXXRNLAVAMWWKSRPPMHLLPFRKLSSLTH-PFADVVDAYEDYVQRSAPLTPEMRNC----------------SEQKFR----------MSDFEFASDRTEDGEYGEDDKAERDEYDWVNPMAKELGLEEPFGNCQFNLSHSKNPCFVSACMHDDDSPLCIRYMLDYCRHNADNGCMDLVWLLNKKQRLEYRAL 762 +++CVL GTK V LV+P+ S +YAD + +GVSP+D ++ A P AA VP+ +A V+AGDC +LPQN+WH+V RN A+ MWWKS+P + F S+LT+ FA + YE YVQ AP++P +R+ ++ R MSDFEFA+D+ + +GED K +RDE DWVNP + LGL E +C FNL++++NPCFV+ C+ DD C+RY L+YC+ D GC DLVW LNKK EY + Sbjct: 192 NIMCVLHGTKRVLLVDPKDSEDVYADSSYAIGVSPVDTRRVNHTAHPRAAHVPYDLAEVRAGDCFFLPQNYWHYVHSFGP---------RNQAITMWWKSKPVVRRDRFN--STLTNLSFAQTLANYEQYVQTVAPISPSVRDACWADAAEAGAALGLGSGDEAARRYLTDPEYPHMSDFEFATDKEDGASFGEDTKGDRDEADWVNPDQQLLGLPESLAHCHFNLTNARNPCFVAGCVARDDIFGCLRYALEYCKAVPDYGCQDLVWTLNKKSGQEYEII 461
BLAST of mRNA_M-pyrifera_M_contig74975.17713.1 vs. uniprot
Match: UPI000A2A8BCE (jmjC domain-containing protein D n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8BCE) HSP 1 Score: 154 bits (388), Expect = 3.270e-40 Identity = 90/265 (33.96%), Postives = 139/265 (52.45%), Query Frame = 1 Query: 1 SMLCVLEGTKVVYLVEPRWSRWLYADRASLVGVSPIDPLHLDLKAFPLAAEVPFTVATVQAGDCLYLPQNWWHFVXXXXXXXXXXXXXXRNLAVAMWWKSRPPMHLL-------PFRKLSSLTHPFADVVDAYEDYVQRSAPLTPEMRNCSEQKFRMSDFEFASDRTEDGEYGEDDKAERDEYDWVNPMAKELG---LEEPFGNCQFNLSHSKNPCFVSACMHDDDSPLCIRYMLDYCRHNADNGCM-DLVWLLNKKQRLEYRAL 762 ++LCV+ G K V LV P +S LY D + +GVS I+P +D+K FP V +TVA V+ GD +Y+PQ WWH V R AVA+WWKS+P H L P ++ + +A + YE +VQ + P ++ C Q MSD+++ +D+ E+ D + +E + K G + P +C F+ ++ K+PC C+ ++D CIRY+LDYC D GC+ L ++NKK + EY+ + Sbjct: 208 NLLCVIHGHKSVILVSPEYSHDLYCDESXQLGVSDINPQSVDMKKFPRVKNVRYTVANVEEGDIVYIPQMWWHQVISRKE---------RQQAVALWWKSKP--HWLEEGKKAFPQAEVQRNKYSYAKALANYEQWVQNVSSKVPRIK-CKSQDSFMSDYKWETDKVENAPVTYGDGGDEEEEKILKDGYKTEGHGXYDRP--SCNFDRTNPKSPCKYDTCIKEEDDVRCIRYILDYCAAYQDRGCVIQLPQIMNKKYQHEYQTI 458
BLAST of mRNA_M-pyrifera_M_contig74975.17713.1 vs. uniprot
Match: A0A2B4STH6_STYPI (Lysine-specific demethylase 8 n=4 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4STH6_STYPI) HSP 1 Score: 151 bits (381), Expect = 3.770e-39 Identity = 93/273 (34.07%), Postives = 146/273 (53.48%), Query Frame = 1 Query: 1 SMLCVLEGTKVVYLVEPRWSRWLYADRASLVGVSPIDPLHLDLKAFPLAAEVPFTVATVQAGDCLYLPQNWWHFVXXXXXXXXXXXXXXRNLAVAMWWKSRPPM-----HLLPFRKLSSLTHPFADVVDAYEDYVQRSAPLTPEMRNCSEQKFRMSDFEFASDRTE------DGEYGEDDKAERDEYDWVNPMAKELGLEEPFGNCQFNLSHSKNPCFVSAC--MHDDDSPLCIRYMLDYCRHNADNGCMD-LVWLLNKKQRLEYRALLLLPD 777 ++LCV+ G K V +V P +S LY+D + ++GV I+P +DL+ FP +V + A V+ GD +Y+PQ WWH V R AVA+WWKS+P LP + L F +V+ YE +VQ + TP ++ C +Q+ MS+++F SD++ DG Y E++ + D P ++L +P C F+ ++ K+PC +C D+ + CIRY+LDYC H D GC+D L L+NK +Y+ + +P Sbjct: 216 NLLCVIHGHKSVLMVSPVYSTHLYSDESRVLGVLDINPQAVDLEKFPNVMKVRYHHANVEEGDIVYIPQMWWHQVISRPE---------RQQAVALWWKSKPAFKKPGREALPVKSLEKERFSFGNVLAQYELWVQNVSDYTPRIK-CKDQQVFMSNYQFESDKSNAPQTRGDGGYLEEELGLKIS-DLHKPEYRDL---DP---CDFDYTNQKSPCHFRSCRDQEDEGNTKCIRYILDYCLHYDDRGCVDQLPQLMNKLGSSQYKEIQQMPS 471
BLAST of mRNA_M-pyrifera_M_contig74975.17713.1 vs. uniprot
Match: UPI001CF43424 (uncharacterized protein LOC114969533 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF43424) HSP 1 Score: 145 bits (365), Expect = 7.500e-37 Identity = 85/258 (32.95%), Postives = 140/258 (54.26%), Query Frame = 1 Query: 1 SMLCVLEGTKVVYLVEPRWSRWLYADRASLVGVSPIDPLHLDLKAFPLAAEVPFTVATVQAGDCLYLPQNWWHFVXXXXXXXXXXXXXXRNLAVAMWWKSRPPMH-----LLPFR--KLSSLTHPFADVVDAYEDYVQRSAPLTPEMRNCSEQKFRMSDFEFASDRTED-----GEYGEDDKAERDEYDWVNPMAKELGLEEPFGNCQFNLSHSKNPCFVSACMHDDDSPLCIRYMLDYCRHNADNGCMDLVWLLNKK 738 ++LCV+ G KVV +V P +SR+LY+D + ++GVS IDP +DL+ +P +V + ATV+ GD +Y+PQ WWH V R AVA+WWKS+P + +P + S + F +V+ YE +VQ + + +QKF MS++ F +D+ E+ G+ G ++ + D + M ++ P C F+ ++ +PC C+ D+D+ C+RY LDYC + D GC+ ++ L+ K Sbjct: 209 NLLCVIRGHKVVNMVSPIYSRYLYSDESRVLGVSDIDPKAVDLEKYPNVMKVRYHTATVEEGDMVYIPQMWWHQVISRPQ---------RQQAVALWWKSKPSVKQHGRKAIPLKGDATSGAKYSFGNVLAQYEMWVQNVSENVARLECKDQQKF-MSEYRFETDKVENAPTTMGDGGHLEEEFGFDSDELTKMKRQRTDLAP---CNFDYNNEISPCQYPPCLEDEDNLKCVRYTLDYCGLHDDRGCVIMLPLVMTK 453
BLAST of mRNA_M-pyrifera_M_contig74975.17713.1 vs. uniprot
Match: UPI00077AF306 (tRNA wybutosine-synthesizing protein 5-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AF306) HSP 1 Score: 142 bits (358), Expect = 1.110e-36 Identity = 84/258 (32.56%), Postives = 140/258 (54.26%), Query Frame = 1 Query: 1 SMLCVLEGTKVVYLVEPRWSRWLYADRASLVGVSPIDPLHLDLKAFPLAAEVPFTVATVQAGDCLYLPQNWWHFVXXXXXXXXXXXXXXRNLAVAMWWKSRPPMH-----LLPFRK--LSSLTHPFADVVDAYEDYVQRSAPLTPEMRNCSEQKFRMSDFEFASDRTED-----GEYGEDDKAERDEYDWVNPMAKELGLEEPFGNCQFNLSHSKNPCFVSACMHDDDSPLCIRYMLDYCRHNADNGCMDLVWLLNKK 738 ++LCV+ G KVV +V P +SR+LY+D + ++GVS I+P +DL+ +P +V + ATV+ GD +Y+PQ WWH V R AVA+WWKS+P + +P + S + F +V+ YE +VQ + + +QKF MS++ F +D+ E+ G+ G ++ + D + M ++ P C F+ ++ +PC C+ D+D+ C+RY LDYC + D GC+ ++ L+ K Sbjct: 99 NLLCVIRGHKVVNMVSPIYSRYLYSDESRVLGVSDINPKAVDLEKYPNVMKVRYHTATVEEGDIVYIPQMWWHQVISRPQ---------RQQAVALWWKSKPSVKQHGRKAIPLKDDATSGEKYSFGNVLAQYEMWVQNVSENVARLECKDQQKF-MSEYRFETDKVENAPTTMGDGGHLEEEFGFDSDELTKMKRQRTDLVP---CNFDYNNEISPCQYPPCLEDEDNLKCVRYTLDYCGLHDDRGCVIMLPLIMTK 343
BLAST of mRNA_M-pyrifera_M_contig74975.17713.1 vs. uniprot
Match: A0A7M6DQ78_9CNID (JmjC domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DQ78_9CNID) HSP 1 Score: 127 bits (319), Expect = 2.720e-30 Identity = 90/276 (32.61%), Postives = 140/276 (50.72%), Query Frame = 1 Query: 1 SMLCVLEGTKVVYLVEPRWSRWLYADRASLVGVSPIDPLHLDLKAFPLAAEVPFTVATVQAGDCLYLPQNWWHFVXXXXXXXXXXXXXXRNLAVAMWWKSRPPMHLLPFRKLSSLTHP---------FADVVDAYEDYVQRSAPLTPEMRNCSEQKFRMSDFEFASDRTE-------DGEYGEDDKAERDEYDWVNPMAKELGLEEPFGN---CQFNLSHSKNPCFVSACMHDDDSPL---CIRYMLDYCRHNADNGCMDLVWLLNKKQRLEYRAL 762 ++LCV+ G K V LV P +S LYA+ A +GV ++ +DL+ FP VP+ A+V+ GDC+Y+PQ WWH V R AV++WWKS+P + + SL+ P +AD + YE++VQ + +R C EQ RMS +E+ +D+ DG E++ E++ + + ++L L E C F+ ++ KNPC +D +P IRY+LDYC+H D GC+ +NK Q + +L Sbjct: 204 NLLCVVTGHKKVILVSPLYSHDLYANGARRMGVLDLNASAVDLERFPKVMNVPYYEASVEEGDCVYIPQMWWHQVYSRKE---------RQQAVSLWWKSKPFWRKVKDQN-PSLSGPMSNDEKGFSYADALIDYENWVQNVSESIVRIR-CQEQDVRMSHYEWETDKDPNAPTTLGDGGDFEEEIFEKNRHLTPTEIREKLVLMEKDKQNERCDFDRTNLKNPCHYE----EDKTPTETDYIRYVLDYCQHFEDRGCV-----MNKPQLMTKMSL 459
BLAST of mRNA_M-pyrifera_M_contig74975.17713.1 vs. uniprot
Match: A0A8J9ZSW7_BRALA (KDM8 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZSW7_BRALA) HSP 1 Score: 114 bits (286), Expect = 8.210e-26 Identity = 80/272 (29.41%), Postives = 123/272 (45.22%), Query Frame = 1 Query: 1 SMLCVLEGTKVVYLVEPRWSRWLYADRASLVGVSPIDPLHLDLKAFPLAAEVPFTVATVQAGDCLYLPQNWWHFVXXXXXXXXXXXXXXRNLAVAMWWKSRPP-MHLLPFRKLSSLTHPFADVVD----------------AYEDYVQRSAPLTPEMRNCSEQKFRMSDFEFASDRTEDGEYGEDDKAERDEYDWVNPMAKELGLEEPFGNCQFNLSHSKNPCFVSACMHDDDSPLCIRYMLDYCRHNADNGCM-DLVWLLNKKQRLEYRAL 762 S+ VL G++ V LV P S +YAD A+++GVSP+D +D++ +P A+V + ++ GD LY+PQ WW V A+ + W S+P L K P + + AYE +VQ + +P + CS Q MS + F E K + +E++ + E C F+ + K PCF C+ DD +P C+RY+LDYC D GC+ +L LLNK + ++ L Sbjct: 186 SLFAVLRGSQTVLLVSPLHSNDVYADEATVLGVSPVDVDSVDMEKYPRVADVQYQKTALEGGDLLYVPQMWWRQVRADPGS---------QQALVIRWSSKPANKQTLEHNKQEQEQTPLSQELKTAGKPERKYSYGQWLAAYELWVQNVSSSSPRL-TCSHQNSPMSLYSF-----------ETMKEDLEEFNGPDYWDGE--------RCVFDSENPKCPCFYDPCLEDDATPPCVRYILDYCLDYEDRGCVIELPQLLNKLYKPDFEKL 428
BLAST of mRNA_M-pyrifera_M_contig74975.17713.1 vs. uniprot
Match: A0A812Z280_SYMMI (Kdm8 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Z280_SYMMI) HSP 1 Score: 108 bits (271), Expect = 1.270e-24 Identity = 58/132 (43.94%), Postives = 81/132 (61.36%), Query Frame = 1 Query: 1 SMLCVLEGTKVVYLVEPRWSRWLYADRASLVGVSPIDPLHLDLKAFPLAAEVPFTVATVQAGDCLYLPQNWWHFVXXXXXXXXXXXXXXRNLAVAMWWKSRPPMHLLPFRKLSSLTH-PFADVVDAYEDYVQ 393 +++CVL GTK V LV+P+ S +YAD + +GVSP+D ++ A P AA VP+ +A V+AGDC +LPQN+WH+V RN A+ MWWKS+P + F S+LT+ FA + YE YVQ Sbjct: 169 NIMCVLHGTKRVLLVDPKDSEDVYADSSYAIGVSPVDTRRVNHTAHPRAAHVPYDLAEVRAGDCFFLPQNYWHYVHSFGP---------RNQAITMWWKSKPVVRRDRFN--STLTNLSFAQTLANYEQYVQ 289
BLAST of mRNA_M-pyrifera_M_contig74975.17713.1 vs. uniprot
Match: A0A2B4S9H3_STYPI (Cupin_8 domain-containing protein n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S9H3_STYPI) HSP 1 Score: 97.4 bits (241), Expect = 1.370e-19 Identity = 71/254 (27.95%), Postives = 113/254 (44.49%), Query Frame = 1 Query: 1 SMLCVLEGTKVVYLVEPRWSRWLYADRASLVGVSPIDPLHLDLKAFPLAAEVPFTVATVQAGDCLYLPQNWWHFVXXXXXXXXXXXXXXRNLAVAMWWKSRPPMHLLPFRK--------LSSLTHPFADVVDAYEDYVQRSAPLTPEMRNCSEQKFRMSDFEFASDRTEDGEYGEDDKAERDEYDWVNPMAKELGLEEPFGNCQFNLSHSKNPCFVSACMHDDDSPLCIRYMLDYCRHNADNGC-MDLVWLLNK 735 +L VL G+ + L+ P S + D L+ +S D L + +P + GD LY+PQ WW V NL V W SR + R L S+ F ++ YE+ + + + +CS+Q RMS++ F E K ++Y+ ++ + EE C F++++ ++PC ++C D +SP+CIRY+LDYC H D GC ++L LLNK Sbjct: 195 QLLSVLNGSATIILISPLHSEKVPFDGDKLLAISRFDTDILSSRG------IPHLTVDLDEGDLLYIPQMWWQHVTFSAEY---------NLFVQFLWPSRTSKNSAKLRSSSLIRGDNLPSMPASFRSLLRKYEE---KFLMMDVQPLDCSDQDKRMSEYTF-----------ETGKMSPEKYEIIH-NGPDFTEEEA---CNFDMNNLQSPCHFASCFKDPESPICIRYILDYCGHWQDRGCAIELPQLLNK 415
BLAST of mRNA_M-pyrifera_M_contig74975.17713.1 vs. uniprot
Match: A0A3M6TZA8_POCDA (Cupin_8 domain-containing protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TZA8_POCDA) HSP 1 Score: 97.1 bits (240), Expect = 1.960e-19 Identity = 71/255 (27.84%), Postives = 111/255 (43.53%), Query Frame = 1 Query: 1 SMLCVLEGTKVVYLVEPRWSRWLYADRASLVGVSPIDPLHLDLKAFPLAAE-VPFTVATVQAGDCLYLPQNWWHFVXXXXXXXXXXXXXXRNLAVAMWWKSRPPMHLLPFRKLSSLTHPFADVVDA-----YEDYVQRSAPLTPEMRNCSEQKFRMSDFEFASDRTEDGEYGEDDKAERDEYDWVNPMAKELGLEEPFGNCQFNLSHSKNPCFVSACMHDDDSPLCIRYMLDYCRHNADNGC-MDLVWLLNKKQR 744 +L VL G+ V L+ P S L D L+ +S D + L++ +P+ + GD LY+PQ WW V NL V W S+ + + + + + A Y ++ + C +Q RMS++ F E K DEY+ ++ + EEP C F+ S+ ++PC + C D +SP+CIRY+LDYC H D GC ++L LLNK ++ Sbjct: 200 QLLTVLNGSATVILISPLHSEKLPFDGDELLAISSFDT------GYTLSSRGIPYLTVNLVKGDMLYIPQMWWQHVTFSTEY---------NLFVQFLWPSKTAITSGNLQSSTQIRGDHLPSIPASLRNLLRKYEEKFLMMDVRPVVCLDQDKRMSEYTF-----------ETGKMSPDEYEAIH-NGPDFSEEEP---CNFDASNLQSPCHFATCFEDPESPICIRYILDYCSHWEDRGCAIELPQLLNKVEK 424 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74975.17713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig74975.17713.1 >prot_M-pyrifera_M_contig74975.17713.1 ID=prot_M-pyrifera_M_contig74975.17713.1|Name=mRNA_M-pyrifera_M_contig74975.17713.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=260bp MLCVLEGTKVVYLVEPRWSRWLYADRASLVGVSPIDPLHLDLKAFPLAAEback to top mRNA from alignment at M-pyrifera_M_contig74975:61..843- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig74975.17713.1 ID=mRNA_M-pyrifera_M_contig74975.17713.1|Name=mRNA_M-pyrifera_M_contig74975.17713.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=783bp|location=Sequence derived from alignment at M-pyrifera_M_contig74975:61..843- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig74975:61..843- >mRNA_M-pyrifera_M_contig74975.17713.1 ID=mRNA_M-pyrifera_M_contig74975.17713.1|Name=mRNA_M-pyrifera_M_contig74975.17713.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1560bp|location=Sequence derived from alignment at M-pyrifera_M_contig74975:61..843- (Macrocystis pyrifera P11B4 male)back to top |