mRNA_M-pyrifera_M_contig74483.17629.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74483.17629.1
Unique NamemRNA_M-pyrifera_M_contig74483.17629.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig74483.17629.1 vs. uniprot
Match: A0A7Y2IIB3_9ACTN (DNA polymerase Y family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IIB3_9ACTN)

HSP 1 Score: 403 bits (1036), Expect = 4.210e-135
Identity = 218/349 (62.46%), Postives = 253/349 (72.49%), Query Frame = 1
Query:    1 RGDARLGVADGVFAARLAAR----------LPDARSGAVVVPAEGSALFLSDLSITALEQPELTDVLQRLGLHTLGAFAALSPVDVVGRFGREGQQAHRLARGEDEHPPDLRKPAADLAVSWDFEPPAERVDTCAFAAKALADELHAHLEAEGLACIRVGIEVETEAGETHVRLWRHEGALSAAALAERARWQLDGWLH----GALGEHRPPSSG----ITRLTLIPDQVIPATGRQLGFWGGRAERADDVARVVARIQAIMGADAVSVPEWRGGRSPDEQIVLIPAAAVDVGDDRPATRPDWVSEPWPGQIPKPAPARVLVEPVPVEVVDRLGRPITVSGRGEASGEP 993
            RG+  +G+ADGVFAAR+AA+          L  A    V+VP+  SA FL+   +  LE P+L DVL RLGL TLG FA +S  DVVGRFG EG  AHRLARG D++PPDLR+PA D+AV+W F+PP ER+D CAFAAKALADELH  LE +GLACIRV IE ETEAGE   RLWRHEG LSAAALAERARWQLDGWLH    G  G  R P +G    I RLTLIPD+V+PATGRQLGFWGGRAERADDV+R VAR+Q I+GAD+V VPEW GGR P EQI LIPAAAVD+G+ R    P  V++PWPG+IP PAPA V      V V+D +G  +TVSGRG    +P
Sbjct:  126 RGELFVGMADGVFAARMAAQTASKIFGDGQLAGAIGQPVIVPSGESAGFLAGFGVDVLELPDLVDVLVRLGLRTLGQFAEISANDVVGRFGAEGLMAHRLARGVDQYPPDLRRPATDMAVTWLFDPPTERIDPCAFAAKALADELHRSLEEKGLACIRVAIEAETEAGEEFSRLWRHEGTLSAAALAERARWQLDGWLHQARMGHAGAGRDPDAGVGSAIARLTLIPDEVVPATGRQLGFWGGRAERADDVSRTVARLQGILGADSVRVPEWSGGRGPAEQIRLIPAAAVDLGEPRMGADPANVNQPWPGKIPPPAPAEVGSLVGSVVVLDEVGEEVTVSGRGVMLNDP 474          
BLAST of mRNA_M-pyrifera_M_contig74483.17629.1 vs. uniprot
Match: A0A7Y2GSP9_9ACTN (DNA polymerase Y family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GSP9_9ACTN)

HSP 1 Score: 398 bits (1023), Expect = 5.300e-133
Identity = 212/346 (61.27%), Postives = 254/346 (73.41%), Query Frame = 1
Query:    1 RGDARLGVADGVFAARL----AARLPDARSGA---VVVPAEGSALFLSDLSITALEQPELTDVLQRLGLHTLGAFAALSPVDVVGRFGREGQQAHRLARGEDEHPPDLRKPAADLAVSWDFEPPAERVDTCAFAAKALADELHAHLEAEGLACIRVGIEVETEAGETHVRLWRHEGALSAAALAERARWQLDGWLHGALGEH----RPPSSG----ITRLTLIPDQVIPATGRQLGFWGGRAERADDVARVVARIQAIMGADAVSVPEWRGGRSPDEQIVLIPAAAVDVGDDRPATRPDWVSEPWPGQIPKPAPARVLVEPVPVEVVDRLGRPITVSGRGEASGEP 993
            RG+  +G+ADGVFAARL    AA++ +  +G+   ++ P E SA FLS   +  LE PEL DVL RLGL TLG FA L+P DV+GRFG EG+ AHRLA+G D +PP LRKPA D+AV+W F+PP ER+DTCAFAAKALADEL+  L   GLACIRV IE ETE G+   RLWRHEG LSAAALAERARWQ+DGWLH A   H    R P +G    I RL+LIPD+V+PATGRQLGFWGGRAERADDV+R VAR+Q I+GA++V VPEWRGGR P EQI LIPAAAVD+G+ R  T P  +++PWPGQIP PAPA +  +   V++V   G  I V+ RGE  G P
Sbjct:  140 RGELFIGIADGVFAARLSAATAAQIGELDNGSEPIIIEPGE-SAAFLSGFGVDTLEMPELADVLVRLGLRTLGQFAELTPDDVIGRFGAEGRVAHRLAQGIDHYPPSLRKPAVDMAVTWWFDPPTERIDTCAFAAKALADELNRSLNDNGLACIRVAIEAETENGDEFSRLWRHEGTLSAAALAERARWQMDGWLHQARMGHTSAGRSPDAGVGSAIARLSLIPDEVVPATGRQLGFWGGRAERADDVSRAVARLQGILGAESVRVPEWRGGRGPAEQITLIPAAAVDLGEPREGTDPSHIAQPWPGQIPPPAPAEIGSDHGEVDLVAESGESIVVTARGELIGTP 484          
BLAST of mRNA_M-pyrifera_M_contig74483.17629.1 vs. uniprot
Match: UPI001F1F4148 (DNA polymerase Y family protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001F1F4148)

HSP 1 Score: 356 bits (913), Expect = 3.380e-117
Identity = 193/327 (59.02%), Postives = 222/327 (67.89%), Query Frame = 1
Query:   13 RLGVADGVFAARLAARLPDARSGAVVVPAEGSALFLSDLSITALEQPELTDVLQRLGLHTLGAFAALSPVDVVGRFGREGQQAHRLARGEDEHPPDLRKPAADLAVSWDFEPPAERVDTCAFAAKALADELHAHLEAEGLACIRVGIEVETEAGETHVRLWRHEGALSAAALAERARWQLDGWLHGALGEHRPPSSGITRLTLIPDQVIPATGRQLGFWGGRAERADDVARVVARIQAIMGADAVSVPEWRGGRSPDEQIVLIPAAAVDVGDDRPATRPDWVSEPWPGQIPKPAPARVLVEPVPVEVVDRLGRPITVSGRGEASGEP 993
            R+GVAD  FAAR AAR  +      VVP   SA FL+ L I ALE+PEL DVL+RLGLHTLG FAAL   DVV RFG EG  AHRLARG DE PP    P  DL V  + +PPA+RVDT AF AK LADELHA L A GLAC RV I  ET  GE   R WRHEGALSA  +A+R RWQLDGWL+G+      P++GITRL L+PD V+ ATGRQLGFWGG    AD VAR VAR+Q ++G+ A SVPEWRGGR P E+  L PAA +D+   R    P  VS PWPG+IP P+PA V  +P+P EV D  G P+ VS RG A+ EP
Sbjct:  102 RVGVADNPFAARWAARTAEP---VTVVPPGESAAFLAPLPIAALERPELVDVLERLGLHTLGQFAALDAADVVARFGAEGLGAHRLARGLDELPPASTPPPPDLEVVHELDPPADRVDTAAFVAKTLADELHARLGALGLACTRVRIIAETGHGERLERCWRHEGALSAGGVADRVRWQLDGWLNGSAATR--PTAGITRLVLVPDGVVAATGRQLGFWGGETAAADRVARAVARVQGLLGSGAASVPEWRGGRGPGERYGLAPAAGIDLAAPRSVVPPRAVSAPWPGRIPAPSPATVPADPIPAEVRDAAGHPVGVSARGLATAEP 423          
BLAST of mRNA_M-pyrifera_M_contig74483.17629.1 vs. uniprot
Match: A0A538D5R1_9ACTN (DNA polymerase Y family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538D5R1_9ACTN)

HSP 1 Score: 339 bits (869), Expect = 3.400e-110
Identity = 183/331 (55.29%), Postives = 226/331 (68.28%), Query Frame = 1
Query:    1 RGDARLGVADGVFAARLAARLPDARSGAVVVPAEGSALFLSDLSITALEQPELTDVLQRLGLHTLGAFAALSPVDVVGRFGREGQQAHRLARGEDEHPPDLRKPAADLAVSWDFEPPAERVDTCAFAAKALADELHAHLEAEGLACIRVGIEVETEAGETHVRLWRHEGALSAAALAERARWQLDGWLHGALGEHRPPSSGITRLTLIPDQVIPATGRQLGFWGGRAERADDVARVVARIQAIMGADAVSVPEWRGGRSPDEQIVLIPAAAVDVGDDRPATRPDWVSEPWPGQIPKPAPARVLVEPVPVEVVDRLGRPITVSGRGEASGEP 993
            R + R+G+ADG FAA +AAR+  +     VV + G+A FL  LS+T LEQPELTDVL RLG+ TLG  AAL   DVVGRFG  G+ +HR+A G D+  PD R+P  DL V+ +FEPP ERV+  AFAA+ LADELH  L+A GLAC R+ I+VE+E GE   RLWRHEGALS  A+A+R RWQLDGWL+G       P+ GI RL L PD+VIPA GRQLGFWGG  E  +   R +AR+ A++G DAV VPEWRGGR P+EQ+ L+PA +V++ D R          PWPGQ+P P+PA V   P  V+VVDR  RP+TV GR   S  P
Sbjct:  131 RTECRIGIADGPFAASIAARVTPSPH---VVTSGGTADFLESLSVTTLEQPELTDVLLRLGITTLGQLAALPLRDVVGRFGSLGEWSHRIASGLDDRLPDARRPPPDLDVALEFEPPVERVEQVAFAARTLADELHTRLDALGLACSRLAIDVESEHGERISRLWRHEGALSVGAIADRVRWQLDGWLNGTAATR--PTGGIIRLVLAPDEVIPARGRQLGFWGGETEADERAKRALARVHALLGPDAVQVPEWRGGRGPNEQLRLVPAQSVELLD-RTVMPTVGSRPPWPGQLPLPSPALVYEHPHDVDVVDRDDRPVTVDGRSSISAAP 455          
BLAST of mRNA_M-pyrifera_M_contig74483.17629.1 vs. uniprot
Match: A0A354BAH5_9ACTN (DNA repair protein n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354BAH5_9ACTN)

HSP 1 Score: 338 bits (868), Expect = 2.180e-109
Identity = 181/331 (54.68%), Postives = 223/331 (67.37%), Query Frame = 1
Query:    1 RGDARLGVADGVFAARLAARLPDARSGAVVVPAEGSALFLSDLSITALEQPELTDVLQRLGLHTLGAFAALSPVDVVGRFGREGQQAHRLARGEDEHPPDLRKPAADLAVSWDFEPPAERVDTCAFAAKALADELHAHLEAEGLACIRVGIEVETEAGETHVRLWRHEGALSAAALAERARWQLDGWLHGALGEHRPPSSGITRLTLIPDQVIPATGRQLGFWGGRAERADDVARVVARIQAIMGADAVSVPEWRGGRSPDEQIVLIPAAAVDVGDDRPATRPDWVSEPWPGQIPKPAPARVLVEPVPVEVVDRLGRPITVSGRGEASGEP 993
            R D R+GVADG FAA LAAR   A +   +VP+   A F + + +  LE+PEL DVL RLG+HTLGAFA L   DV+ RFG +G  AHRLA G DE PPD R+P  D  VS + +PPA+RVD  AF A+ LADELH  L  +G+ C+RVGIE ETE GE  +R WRHEG LS AA+A+R RWQLDGWL+G+      PS GITRL LIPD++I A GRQLGFWGG  E      RV AR+Q  +GADAV VPE  GGR PD Q+ L+PAA V++     +  P+  + PWPG +P P+P RVL EP+P+EV+D   R + V+GRG  S  P
Sbjct:  180 RTDVRVGVADGPFAAELAAR---AANPTRLVPSGEVAGFFAPMKVDVLERPELVDVLHRLGVHTLGAFADLPASDVLARFGSDGLGAHRLAGGRDERPPDARRPPVDWTVSNEIDPPADRVDRVAFLARTLADELHRRLGRDGVTCVRVGIEAETEHGEQLLRFWRHEGTLSDAAVADRVRWQLDGWLNGSAANR--PSGGITRLALIPDELIAAKGRQLGFWGGETEVDQRAIRVAARLQGQLGADAVLVPEREGGRHPDSQLRLVPAATVELTGR--SLDPESDTAPWPGVLPAPSPTRVLAEPIPIEVLDGCNRTVVVTGRGLLSASP 503          
BLAST of mRNA_M-pyrifera_M_contig74483.17629.1 vs. uniprot
Match: A0A5Q2RIP2_9ACTN (DNA polymerase Y family protein n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RIP2_9ACTN)

HSP 1 Score: 337 bits (863), Expect = 4.360e-109
Identity = 179/332 (53.92%), Postives = 223/332 (67.17%), Query Frame = 1
Query:    1 RGDARLGVADGVFAARLAARLPDARSGAVVVPAEGSALFLSDLSITALEQPELTDVLQRLGLHTLGAFAALSPVDVVGRFGREGQQAHRLARGEDEHPPDLRKPAADLAVSWDFEPPAERVDTCAFAAKALADELHAHLEAEGLACIRVGIEVETEAGETHVRLWRHEGALSAAALAERARWQLDGWLHGALGEHRPPSSGITRLTLIPDQVIPATGRQLGFWGGRAERADDVARVVARIQAIMGADAVSVPEWRGGRSPDEQIVLIPAAAVDVGDDRPATRPDWVSEPWPGQIPKPAPARVLVE-PVPVEVVDRLGRPITVSGRGEASGEP 993
            RG+ R+G ADG FAA +AAR       A +VP  GS  FL+ L +  L+ P L DVL+RLGL TLG+ AAL   DVV RFG +G++AHRLA G +E PPD R        + + +PP ERVD  AF AK+LADELH  L+  GLAC  + I  ETE GE   R WRHEGALSA A+A+R RWQLDGWL G+      P++GITRL L P++V  A GRQLGFWGG++   +  AR +AR+QA++G +AV VPEWRGGR P  Q+ L+PAA+VD+   RPAT P WV  PWPG++P PAPA VL + P  +EVVD  GR + VSGRG  +  P
Sbjct:  132 RGEVRVGTADGPFAAGIAARRXX--XAARLVPPGGSPAFLAPLPVALLDAPALVDVLERLGLRTLGSLAALPRSDVVARFGVDGERAHRLAAGLEERPPDARPVPPSFEAAAELDPPVERVDHAAFVAKSLADELHDRLDGVGLACSLLAIRAETEHGEVLERRWRHEGALSAGAIADRVRWQLDGWLTGSAVAR--PTAGITRLALAPEEVRVAAGRQLGFWGGQSAEGERAARALARVQAMLGPEAVRVPEWRGGRDPARQVALVPAASVDLTSPRPATDPSWVEAPWPGRLPPPAPATVLTDLPRGIEVVDAEGRSVGVSGRGLVTAPP 459          
BLAST of mRNA_M-pyrifera_M_contig74483.17629.1 vs. uniprot
Match: A0A7X5WRH5_9ACTN (DNA polymerase Y family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WRH5_9ACTN)

HSP 1 Score: 329 bits (844), Expect = 1.150e-108
Identity = 169/287 (58.89%), Postives = 208/287 (72.47%), Query Frame = 1
Query:  142 LEQPELTDVLQRLGLHTLGAFAALSPVDVVGRFGREGQQAHRLARGEDEHPPDLRKPAADLAVSWDFEPPAERVDTCAFAAKALADELHAHLEAEGLACIRVGIEVETEAGETHVRLWRHEGALSAAALAERARWQLDGWLHGALGEHRPPSSGITRLTLIPDQVIPATGRQLGFWGGRAERADDVARVVARIQAIMGADAVSVPEWRGGRSPDEQIVLIPAAAVDVGDDR---PATRPDWVSEPWPGQIPKPAPARVLVEPVPVEVVDRLGRPITVSGRGEASGEP 993
            L++PELTDVL RLG+ TLGAFAAL   DV+ RFG EG+ AHRLA G DE PPD R P  D  V+ + +PPAER+D  AF A+ LA ELH  L+ EG+AC R+ IE ETE GET +R+WRHEGALSAAA+A+R RWQLDGWL+G+      PS GITR+ L+P++V+ ATGRQLGFWGG  E  +  ARV AR+Q  +GA+AV VPE RGGR PDEQ+VL+P AAV++   R   P T       PWPG++P P+PARVL  PVP E++D   RP+TV+GRG AS  P
Sbjct:    2 LDRPELTDVLVRLGIRTLGAFAALRAADVLARFGTEGRAAHRLASGLDERPPDARLPPTDWTVTTEIDPPAERIDRVAFCARTLAGELHRRLDREGVACTRIAIEAETEHGETLLRVWRHEGALSAAAVADRVRWQLDGWLNGSAVTR--PSGGITRVRLVPEEVVAATGRQLGFWGGETEVDERAARVAARLQGRLGAEAVRVPERRGGRHPDEQLVLVPTAAVELRGRRLADPRTDGGDGPPPWPGRLPAPSPARVLAAPVPAELLDDDDRPVTVTGRGLASAPP 286          
BLAST of mRNA_M-pyrifera_M_contig74483.17629.1 vs. uniprot
Match: A0A7Y2DCS2_9ACTN (DNA polymerase Y family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DCS2_9ACTN)

HSP 1 Score: 331 bits (849), Expect = 5.730e-107
Identity = 182/339 (53.69%), Postives = 225/339 (66.37%), Query Frame = 1
Query:    1 RGDARLGVADGVFAARLAARLPDA-RSGAVVVPAEGSALFLSDLSITALEQPELTDVLQRLGLHTLGAFAALSPVDVVGRFGREGQQAHRLARGEDEHPPDLRKPAADLAVSWDFEPPAERVDTCAFAAKALADELHAHLEAEGLACIRVGIEVETEAGETHVRLWRHEGALSAAALAERARWQLDGWLHGALGEHRPPSSGITRLTLIPDQVIPATGRQLGFWGGRAERADDVARVVARIQAIMGADAVSVPEWRGGRSPDEQIVLIPAAAVDVGDD--RPATRPDW-----VSEPWPGQIPKPAPARVLVEPVPVEVVDRLGRPITVSGRGEASGEP 993
            R + R+GVADG FAA LAAR   A R+G  ++       FL  L +TALE+PELTDVL RLGL TLGAFAAL   DV+GRFG EG++ HRLA G D  PPD R P  DL VS + +PP ERVD  AF AK LA++L   L+ EG+AC RV IE ETE GE  VRLWRHEGALSAAA+A+R RWQLDGWL+ A      PS G+ RL L+PD+VI A GRQLGFWGG     +  AR  AR+Q ++G DAV VPEW GGR   +++ L+ AAAVD+ +   RP           V  PWPG++P+PAP+ +   P+ V+V+D  G  + ++GRG AS  P
Sbjct:  131 RTEVRIGVADGPFAAALAARAAQAERTGCAIIEPGSVTDFLHPLPVTALERPELTDVLLRLGLRTLGAFAALPATDVLGRFGVEGREGHRLANGLDALPPDGRIPPPDLDVSIELDPPIERVDQAAFVAKTLAEQLEQQLQHEGVACTRVAIEAETEHGELLVRLWRHEGALSAAAVADRVRWQLDGWLNAAPSAR--PSGGLIRLALVPDEVIAAAGRQLGFWGGETAADERAARAFARVQGLLGPDAVRVPEWSGGRQLGDEVALVSAAAVDLAERSLRPVAADAGSIGVGVEAPWPGRLPRPAPSLLHASPLLVDVLDAAGDAVHITGRGLASAAP 467          
BLAST of mRNA_M-pyrifera_M_contig74483.17629.1 vs. uniprot
Match: A0A3M2H0W7_ACTSX (DNA polymerase Y family protein n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2H0W7_ACTSX)

HSP 1 Score: 329 bits (844), Expect = 3.630e-106
Identity = 184/335 (54.93%), Postives = 223/335 (66.57%), Query Frame = 1
Query:   13 RLGVADGVFAARLAARLPDARSGAVVVPAEGSALFLSDLSITALEQPELTDVLQRLGLHTLGAFAALSPVDVVGRFGREGQQAHRLARGEDEHPPDLRKPAADLAVSWDFEPPAERVDTCAFAAKALADELHAHLEAEGLACIRVGIEVETEAGETHVRLWRHEGALSAAALAERARWQLDGWLHGALGEHRPPSSGITRLTLIPDQVIPATGRQLGFWGGRAERADDVARVVARIQAIMGADAVSVPEWRGGRSPDEQIVLIPAAAVDVGDDRPATRPDWV--------SEPWPGQIPKPAPARVLVEPVPVEVVDRLGRPITVSGRGEASGEP 993
            R+GVADG FAA  AARL  AR   +V P  GSA FL+ L + A+ +P+L DVL RLGL TLG  AAL   DV+ RFG EG+ AHRLA G D+ PPD R P  D +V+ + +PPA+RVD  AFAA+ LADELH  L  EGLAC+ VGIE ETE GE  VR WRHEGAL+AAA+A+R RWQLD WLH        PS  + RL L+PD+V+PA GRQLGFWGG +   +  ARV AR++   G  AV VPE RGGR P + + L+PAAAV++   R A  P           + PWPG +P P+P RVL EPV VEV+D  G P+ V+GRGE S EP
Sbjct:  144 RVGVADGAFAAGWAARL--ARPVRLVEPG-GSAAFLAPLPVGAVGRPDLVDVLVRLGLRTLGDLAALPAADVLARFGTEGRTAHRLAAGLDDRPPDARIPPPDWSVATELDPPADRVDRAAFAARRLADELHERLGREGLACVSVGIEAETEHGEVLVRHWRHEGALTAAAVADRVRWQLDAWLHAPAASR--PSGALVRLALVPDEVVPARGRQLGFWGGESAGDERAARVAARLEGQFGVGAVLVPERRGGREPHDAVELVPAAAVELRG-RSAVSPIGPGGGPGPEGAPPWPGSLPTPSPTRVLAEPVAVEVLDAGGAPVGVTGRGEISAEP 472          
BLAST of mRNA_M-pyrifera_M_contig74483.17629.1 vs. uniprot
Match: A0A3C0HMY9_9ACTN (DNA repair protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HMY9_9ACTN)

HSP 1 Score: 321 bits (823), Expect = 3.790e-105
Identity = 165/302 (54.64%), Postives = 205/302 (67.88%), Query Frame = 1
Query:   88 VVPAEGSALFLSDLSITALEQPELTDVLQRLGLHTLGAFAALSPVDVVGRFGREGQQAHRLARGEDEHPPDLRKPAADLAVSWDFEPPAERVDTCAFAAKALADELHAHLEAEGLACIRVGIEVETEAGETHVRLWRHEGALSAAALAERARWQLDGWLHGALGEHRPPSSGITRLTLIPDQVIPATGRQLGFWGGRAERADDVARVVARIQAIMGADAVSVPEWRGGRSPDEQIVLIPAAAVDVGDDRPATRPDWVSEPWPGQIPKPAPARVLVEPVPVEVVDRLGRPITVSGRGEASGEP 993
            +VP+   A F + + +  LE+PEL DVL RLG+HTLGAFA L   DV+ RFG +G  AHRLA G DE PPD R+P  D  VS + +PPA+RVD  AF A+ LADELH  L  +G+ C+RVGIE ETE GE  +R WRHEG LS AA+A+R RWQLDGWL+G+      PS GITRL LIPD++I A GRQLGFWGG  E      RV AR+Q  +GADAV VPE  GGR PD Q+ L+PAA V++     +  P+  + PWPG +P P+P RVL EP+P+EV+D   R + V+GRG  S  P
Sbjct:   13 LVPSVEFAGFFAPMKVDVLERPELVDVLHRLGVHTLGAFADLPASDVLARFGSDGLGAHRLAGGRDERPPDARRPPVDWTVSNEIDPPADRVDRVAFLARTLADELHRRLGRDGVTCVRVGIEAETEHGEQLLRFWRHEGTLSDAAVADRVRWQLDGWLNGSAANR--PSGGITRLALIPDELIAAKGRQLGFWGGETEVDQRAIRVAARLQGQLGADAVLVPEREGGRHPDSQLRLVPAATVELTGR--SLDPESDTAPWPGVLPAPSPTRVLAEPIPIEVLDGCNRTVVVTGRGLLSASP 310          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74483.17629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2IIB3_9ACTN4.210e-13562.46DNA polymerase Y family protein n=1 Tax=Acidimicro... [more]
A0A7Y2GSP9_9ACTN5.300e-13361.27DNA polymerase Y family protein n=1 Tax=Acidimicro... [more]
UPI001F1F41483.380e-11759.02DNA polymerase Y family protein n=1 Tax=Rhabdother... [more]
A0A538D5R1_9ACTN3.400e-11055.29DNA polymerase Y family protein n=1 Tax=Actinomyce... [more]
A0A354BAH5_9ACTN2.180e-10954.68DNA repair protein n=5 Tax=Acidimicrobiaceae bacte... [more]
A0A5Q2RIP2_9ACTN4.360e-10953.92DNA polymerase Y family protein n=1 Tax=Actinomari... [more]
A0A7X5WRH5_9ACTN1.150e-10858.89DNA polymerase Y family protein n=1 Tax=Actinomyce... [more]
A0A7Y2DCS2_9ACTN5.730e-10753.69DNA polymerase Y family protein n=1 Tax=Acidimicro... [more]
A0A3M2H0W7_ACTSX3.630e-10654.93DNA polymerase Y family protein n=1 Tax=Actinomyce... [more]
A0A3C0HMY9_9ACTN3.790e-10554.64DNA repair protein (Fragment) n=1 Tax=Acidimicrobi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74483contigM-pyrifera_M_contig74483:1..1074 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score285.4
Seed ortholog evalue3.4e-74
Seed eggNOG ortholog1229780.BN381_80180
Preferred namedinB_2
KEGG koko:K14161
Hectar predicted targeting categoryother localisation
EggNOG free text desc.impB/mucB/samB family
EggNOG OGs2GMZ3@201174,3UWGC@52018,COG0389@1,COG0389@2
COG Functional cat.L
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03400
Exons2
Model size993
Cds size993
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816643.668119-CDS-M-pyrifera_M_contig74483:0..4141622816643.668119-CDS-M-pyrifera_M_contig74483:0..414Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74483 1..414 -
1692278095.2418396-CDS-M-pyrifera_M_contig74483:0..4141692278095.2418396-CDS-M-pyrifera_M_contig74483:0..414Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74483 1..414 -
1622816643.6817477-CDS-M-pyrifera_M_contig74483:495..10741622816643.6817477-CDS-M-pyrifera_M_contig74483:495..1074Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74483 496..1074 -
1692278095.2652185-CDS-M-pyrifera_M_contig74483:495..10741692278095.2652185-CDS-M-pyrifera_M_contig74483:495..1074Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74483 496..1074 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74483.17629.1prot_M-pyrifera_M_contig74483.17629.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74483 1..1074 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74483.17629.1

>prot_M-pyrifera_M_contig74483.17629.1 ID=prot_M-pyrifera_M_contig74483.17629.1|Name=mRNA_M-pyrifera_M_contig74483.17629.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=331bp
RGDARLGVADGVFAARLAARLPDARSGAVVVPAEGSALFLSDLSITALEQ
PELTDVLQRLGLHTLGAFAALSPVDVVGRFGREGQQAHRLARGEDEHPPD
LRKPAADLAVSWDFEPPAERVDTCAFAAKALADELHAHLEAEGLACIRVG
IEVETEAGETHVRLWRHEGALSAAALAERARWQLDGWLHGALGEHRPPSS
GITRLTLIPDQVIPATGRQLGFWGGRAERADDVARVVARIQAIMGADAVS
VPEWRGGRSPDEQIVLIPAAAVDVGDDRPATRPDWVSEPWPGQIPKPAPA
RVLVEPVPVEVVDRLGRPITVSGRGEASGEP
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mRNA from alignment at M-pyrifera_M_contig74483:1..1074-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74483.17629.1 ID=mRNA_M-pyrifera_M_contig74483.17629.1|Name=mRNA_M-pyrifera_M_contig74483.17629.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1074bp|location=Sequence derived from alignment at M-pyrifera_M_contig74483:1..1074- (Macrocystis pyrifera P11B4 male)
CGGGGCGACGCACGGCTCGGCGTGGCCGATGGTGTCTTCGCCGCCCGTCT GGCCGCCCGCCTGCCCGACGCCCGCTCCGGCGCCGTGGTGGTCCCGGCCG AGGGGAGTGCGCTGTTCCTGTCGGATCTGAGCATCACCGCGCTCGAGCAA CCGGAACTCACCGATGTGCTCCAGCGGCTCGGACTCCACACTCTCGGGGC GTTCGCTGCCCTGTCGCCGGTCGACGTGGTCGGTCGTTTCGGGCGCGAGG GGCAACAGGCCCATCGACTTGCTCGAGGTGAAGACGAGCACCCACCAGAC CTTCGCAAACCCGCCGCCGATCTGGCCGTCAGTTGGGACTTCGAACCACC GGCCGAGCGGGTCGACACCTGCGCCTTTGCGGCAAAGGCCTTGGCCGACG AACTCCACGCCCACCTCGAGGCCGAGGGCCTCGCGTGCATCAGGGTGGGG ATCGAAGTCGAGACCGAGGCGGGCGAGACCCACGTTCGACTGTGGCGTCA CGAGGGCGCACTGTCGGCGGCGGCACTGGCCGAACGGGCCCGCTGGCAAC TCGATGGCTGGCTCCACGGAGCGCTCGGCGTCCAGCAGCGGCGCTCTCAT TCGGGTTCTTCAGATGCAAGATCCCCAGACTCGAGCTCGGCACGATCACG ACATGCCGAGGAACACCGCCCACCGTCGTCGGGCATCACTCGGCTCACAC TCATCCCCGACCAGGTGATTCCGGCAACCGGCCGTCAACTGGGCTTCTGG GGTGGTCGGGCCGAACGGGCCGACGACGTCGCCCGAGTCGTCGCCCGGAT ACAGGCGATCATGGGTGCCGATGCGGTGTCGGTGCCGGAGTGGCGTGGCG GTCGCAGTCCCGACGAGCAGATCGTGTTGATCCCCGCAGCCGCAGTCGAC GTCGGCGACGACCGCCCGGCGACCCGGCCGGACTGGGTGAGCGAGCCATG GCCCGGGCAGATCCCCAAGCCGGCACCGGCGAGGGTCTTGGTCGAACCCG TGCCGGTCGAGGTCGTTGATCGGCTCGGTCGGCCCATCACCGTCAGCGGG CGAGGCGAGGCCTCGGGCGAACCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74483:1..1074-

>mRNA_M-pyrifera_M_contig74483.17629.1 ID=mRNA_M-pyrifera_M_contig74483.17629.1|Name=mRNA_M-pyrifera_M_contig74483.17629.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1986bp|location=Sequence derived from alignment at M-pyrifera_M_contig74483:1..1074- (Macrocystis pyrifera P11B4 male)
CGGGGCGACGCACGGCTCGGCGTGGCCGATGGTGTCTTCGCCGCCCGTCT
GGCCGCCCGCCTGCCCGACGCCCGCTCCGGCGCCGTGGTGGTCCCGGCCG
AGGGGAGTGCGCTGTTCCTGTCGGATCTGAGCATCACCGCGCTCGAGCAA
CCGGAACTCACCGATGTGCTCCAGCGGCTCGGACTCCACACTCTCGGGGC
GTTCGCTGCCCTGTCGCCGGTCGACGTGGTCGGTCGTTTCGGGCGCGAGG
GGCAACAGGCCCATCGACTTGCTCGAGGTGAAGACGAGCACCCACCAGAC
CTTCGCAAACCCGCCGCCGATCTGGCCGTCAGTTGGGACTTCGAACCACC
GGCCGAGCGGGTCGACACCTGCGCCTTTGCGGCAAAGGCCTTGGCCGACG
AACTCCACGCCCACCTCGAGGCCGAGGGCCTCGCGTGCATCAGGGTGGGG
ATCGAAGTCGAGACCGAGGCGGGCGAGACCCACGTTCGACTGTGGCGTCA
CGAGGGCGCACTGTCGGCGGCGGCACTGGCCGAACGGGCCCGCTGGCAAC
TCGATGGCTGGCTCCACGGAGCGCTCGGCCGGGGCGACGCACGGCTCGGC
GTGGCCGATGGTGTCTTCGCCGCCCGTCTGGCCGCCCGCCTGCCCGACGC
CCGCTCCGGCGCCGTGGTGGTCCCGGCCGAGGGGAGTGCGCTGTTCCTGT
CGGATCTGAGCATCACCGCGCTCGAGCAACCGGAACTCACCGATGTGCTC
CAGCGGCTCGGACTCCACACTCTCGGGGCGTTCGCTGCCCTGTCGCCGGT
CGACGTGGTCGGTCGTTTCGGGCGCGAGGGGCAACAGGCCCATCGACTTG
CTCGAGGTGAAGACGAGCACCCACCAGACCTTCGCAAACCCGCCGCCGAT
CTGGCCGTCAGTTGGGACTTCGAACCACCGGCCGAGCGGGTCGACACCTG
CGCCTTTGCGGCAAAGGCCTTGGCCGACGAACTCCACGCCCACCTCGAGG
CCGAGGGCCTCGCGTGCATCAGGGTGGGGATCGAAGTCGAGACCGAGGCG
GGCGAGACCCACGTTCGACTGTGGCGTCACGAGGGCGCACTGTCGGCGGC
GGCACTGGCCGAACGGGCCCGCTGGCAACTCGATGGCTGGCTCCACGGAG
CGCTCGGCGAACACCGCCCACCGTCGTCGGGCATCACTCGGCTCACACTC
ATCCCCGACCAGGTGATTCCGGCAACCGGCCGTCAACTGGGCTTCTGGGG
TGGTCGGGCCGAACGGGCCGACGACGTCGCCCGAGTCGTCGCCCGGATAC
AGGCGATCATGGGTGCCGATGCGGTGTCGGTGCCGGAGTGGCGTGGCGGT
CGCAGTCCCGACGAGCAGATCGTGTTGATCCCCGCAGCCGCAGTCGACGT
CGGCGACGACCGCCCGGCGACCCGGCCGGACTGGGTGAGCGAGCCATGGC
CCGGGCAGATCCCCAAGCCGGCACCGGCGAGGGTCTTGGTCGAACCCGTG
CCGGTCGAGGTCGTTGATCGGCTCGGTCGGCCCATCACCGTCAGCGGGCG
AGGCGAGGCCTCGGGCGAACCGGAACACCGCCCACCGTCGTCGGGCATCA
CTCGGCTCACACTCATCCCCGACCAGGTGATTCCGGCAACCGGCCGTCAA
CTGGGCTTCTGGGGTGGTCGGGCCGAACGGGCCGACGACGTCGCCCGAGT
CGTCGCCCGGATACAGGCGATCATGGGTGCCGATGCGGTGTCGGTGCCGG
AGTGGCGTGGCGGTCGCAGTCCCGACGAGCAGATCGTGTTGATCCCCGCA
GCCGCAGTCGACGTCGGCGACGACCGCCCGGCGACCCGGCCGGACTGGGT
GAGCGAGCCATGGCCCGGGCAGATCCCCAAGCCGGCACCGGCGAGGGTCT
TGGTCGAACCCGTGCCGGTCGAGGTCGTTGATCGGCTCGGTCGGCCCATC
ACCGTCAGCGGGCGAGGCGAGGCCTCGGGCGAACCG
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