mRNA_M-pyrifera_M_contig7430.17600.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7430.17600.1 vs. uniprot
Match: A0A6H5KZ28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ28_9PHAE) HSP 1 Score: 159 bits (401), Expect = 2.160e-45 Identity = 85/137 (62.04%), Postives = 96/137 (70.07%), Query Frame = 1 Query: 1 SSYYVSPVTVEIKHSREVEPAVYDREVTLSVLGREFCVAKSLVVLHSPECVEAVKRGDVGIGQLFRALDVLPNFELLNAGR-----------SGAAGGE--GVV----GGIWRVYDLRSKHLSCRIHEEFPPDLFSL 360 SSYY SPVTV++ EV P VYDREV +SVLG FCVAKSLVV+H P C EAVK G VG+GQLF +L++LP FELLNAGR S GGE GV GG WR+YDLRS H+SCRI+EEFPPDLF L Sbjct: 191 SSYYNSPVTVDVIFCTEVGPGVYDREVEISVLGHVFCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRSARFSGNSDTIGGEKEGVCTRDDGGFWRLYDLRSGHVSCRIYEEFPPDLFGL 327
BLAST of mRNA_M-pyrifera_M_contig7430.17600.1 vs. uniprot
Match: A0A835YNG4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNG4_9STRA) HSP 1 Score: 123 bits (308), Expect = 4.290e-32 Identity = 67/129 (51.94%), Postives = 80/129 (62.02%), Query Frame = 1 Query: 1 SSYYVSPVTVEIKHSREVEPAVYDREVTLSVLGREFCVAKSLVVLHSPECVEAVKRGDVGIGQLFRALDVLPNFELLNAGR---------SGAAGGEGVVGGIWRVYDLRSKHLSCRIHEEFPPDLFSL 360 SSYY +PV V I VY+R VTLSV G +FC AKS+VVLHS C+EAV+ VGIGQLFR LD LP F LL+ G+ A + GIWR+YDL SKHLSCRI E+F +LF + Sbjct: 142 SSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDM 270
BLAST of mRNA_M-pyrifera_M_contig7430.17600.1 vs. uniprot
Match: A0A7S2L0C0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L0C0_9STRA) HSP 1 Score: 113 bits (282), Expect = 6.740e-28 Identity = 58/127 (45.67%), Postives = 80/127 (62.99%), Query Frame = 1 Query: 1 SSYYVSPVTVEIKHSRE-------VEPAVYDREVTLSVLGREFCVAKSLVVLHSPECVEAVKRGDVGIGQLFRALDVLPNFELLNAGRSGAAGGEGVVGGIWRVYDLRSKHLSCRIHEEFPPDLFSL 360 SS+Y SPVTV + E V+DR V L V + FC A S + +H P C E V+ G+VG+GQLFR LD LP F+LL+AGR+ + GG+WR+Y+L+SK L+C I E+F PD++S+ Sbjct: 181 SSFYDSPVTVVVNSCVERPRLCASENAGVWDRSVDLKVYNKRFCRATSEITVHEPMCAELVRSGEVGLGQLFRYLDKLPTFDLLDAGRTES-------GGMWRLYELKSKELTCSIFEDFSPDVWSM 300
BLAST of mRNA_M-pyrifera_M_contig7430.17600.1 vs. uniprot
Match: D8LJX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX8_ECTSI) HSP 1 Score: 101 bits (252), Expect = 2.020e-25 Identity = 53/94 (56.38%), Postives = 61/94 (64.89%), Query Frame = 1 Query: 130 VLHSPECVEAVKRGDVGIGQLFRALDVLPNFELLNAGR-----------SGAAGGE------GVVGGIWRVYDLRSKHLSCRIHEEFPPDLFSL 360 V+H C EAVK G VG+GQLF +L++LP FELLNAGR S GGE G GG WR+YDLRS H+SCRI+EEFPPDLF L Sbjct: 18 VVHDAACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRSARFPGNSDTIGGEKEGGCTGEEGGFWRLYDLRSGHVSCRIYEEFPPDLFGL 111
BLAST of mRNA_M-pyrifera_M_contig7430.17600.1 vs. uniprot
Match: A0A1Z5JUV1_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUV1_FISSO) HSP 1 Score: 98.6 bits (244), Expect = 1.270e-23 Identity = 56/122 (45.90%), Postives = 73/122 (59.84%), Query Frame = 1 Query: 1 SSYYVSPVTVEIKHS--REVEPAVYDREVTLSVLGREFCVAKSLVVLHSPECVEAVKRGDVGIGQLFRALDVLPNFELLNAGRSGAAGGEGVVGGIWRVYDLRSKHLSCRIHEEFPPDLFSL 360 +SYY + V+V ++ R+ P V+DR V L VLG EFC A+S V + C E V G VG+GQLFR L+VLP F L AG + + GGIWR Y L+ L+C+I EEF P L+ L Sbjct: 50 ASYYDADVSVRVEGCSFRQENPRVWDRTVYLEVLGVEFCRAESEVTIQQDSCQELVASGQVGLGQLFRYLNVLPMFFLREAGV------DPITGGIWREYTLQCDALTCQIREEFIPGLWEL 165
BLAST of mRNA_M-pyrifera_M_contig7430.17600.1 vs. uniprot
Match: A0A0L0HN02_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HN02_SPIPD) HSP 1 Score: 96.7 bits (239), Expect = 1.920e-22 Identity = 55/129 (42.64%), Postives = 73/129 (56.59%), Query Frame = 1 Query: 1 SSYYVSPVTVEIKHSREVEP---------AVYDREVTLSVLGREFCVAKSLVVLHSPECVEAVKRGDVGIGQLFRALDVLPNFELLNAGRSGAAGGEGVVGGIWRVYDLRSKHLSCRIHEEFPPDLFSL 360 S+YY S V+V+I H+ + +V+ REV L L + C AKS V + PE + + VGIGQLFR L++LP FELL GR+ V WR YDLRS ++CRI EEFP +F+L Sbjct: 69 SAYYNSTVSVDIIHNELINEESASNAETESVFRREVNLRCLNQICCNAKSTVTITDPEYLRLILEQQVGIGQLFRYLNILPEFELLQVGRT--------VNSFWREYDLRSNGVNCRIREEFPLGVFNL 189
BLAST of mRNA_M-pyrifera_M_contig7430.17600.1 vs. uniprot
Match: A0A7S1C1D9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C1D9_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 4.350e-22 Identity = 57/131 (43.51%), Postives = 73/131 (55.73%), Query Frame = 1 Query: 1 SSYYVSPVTVEIKH--------SREVEPAVYDREVTLSVLGREFCVAKSLVVLHSPECVEAVKRGDVGIGQLFRALDVLPNFELLNAGRS---GAAGGEGVVGGIWRVYDLRSKHLSCRIHEEFPPDLFSL 360 SS+Y +PV+V + SR V AV+DR V L V FC A S+V +H C V+ G +G+GQLFR LD LP FEL++AGR+ G GG G +WR Y L L C I EEF D +S+ Sbjct: 71 SSFYDAPVSVVVVRNEERASAASRRVPSAVWDRSVALVVHDTTFCRAASVVTVHDAGCAALVRSGKIGLGQLFRHLDRLPKFELVDAGRTRSIGVDGGADDEGRLWRRYRLWCDELECDILEEFVADTWSI 201
BLAST of mRNA_M-pyrifera_M_contig7430.17600.1 vs. uniprot
Match: A0A139AYU2_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AYU2_GONPJ) HSP 1 Score: 95.1 bits (235), Expect = 5.010e-22 Identity = 57/139 (41.01%), Postives = 75/139 (53.96%), Query Frame = 1 Query: 1 SSYYVSPVTVEIKHSREVEPA------------------VYDREVTLSVLGREFCVAKSLVVLHSPECVEAVKRGDVGIGQLFRALDVLPNFELLNAGRSGAAGGEGVVGGIWRVYDLRSKHLSCRIHEEFPPDLFSLA 363 S+YY SPV+V I +R+++ A V+DREV + LG+ C A S V + + EC+ V VGIGQLFR L+VLP+F LLN GRS G WR Y L S+ + C I EEFP +F+ A Sbjct: 61 SAYYNSPVSVVIVRNRKIDGASNHVPPPGITSKPKNALAVFDREVRIECLGQVCCKAVSTVKILNDECLRLVDEQKVGIGQLFRYLNVLPSFALLNCGRS--------TGQFWRDYALTSEGVRCEIREEFPDGVFNFA 191
BLAST of mRNA_M-pyrifera_M_contig7430.17600.1 vs. uniprot
Match: A0A0L0FYY7_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FYY7_9EUKA) HSP 1 Score: 94.4 bits (233), Expect = 2.460e-21 Identity = 53/121 (43.80%), Postives = 74/121 (61.16%), Query Frame = 1 Query: 1 SSYYVSPVTVEIKHSR-EVEPAVYDREVTLSVLGREFCVAKSLVVLHSPECVEAVKRGDVGIGQLFRALDVLPNFELLNAGRSGAAGGEGVVGGIWRVYDLRSKHLSCRIHEEFPPDLFSL 360 SSYY + VTV+I+H+R + YDREV L + + FC+A S + L E V+ V+ +G+GQLFR L++LP F LL GR+ GG+ R Y L+S ++CRI E FP LF+L Sbjct: 117 SSYYNAEVTVKIRHNRPRTDQGWYDREVELLIFDQVFCIATSEIHLDRKEYVDLVEINRIGLGQLFRHLNLLPFFHLLKVGRN-------PEGGLKRTYTLQSPGITCRITETFPRKLFTL 230
BLAST of mRNA_M-pyrifera_M_contig7430.17600.1 vs. uniprot
Match: A0A7S4MCI6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MCI6_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 3.440e-21 Identity = 51/122 (41.80%), Postives = 66/122 (54.10%), Query Frame = 1 Query: 58 PAVYDREVTLSVLGREFCVAKSLVVLHSPECVEAVKRGDVGIGQLFRALDVLPNFELLNAGRSGAA---------------------GGEGVVGGIWRVYDLRSKHLSCRIHEEFPPDLFSL 360 PA +DR V LSV G FC+A S++ + PEC+ V G VGIGQLFR LD LP FEL++AGR + GG G+WR+Y LR + L C I E+F PD + + Sbjct: 301 PATWDRTVRLSVHGYAFCIAASVITVRDPECIRLVHSGAVGIGQLFRHLDKLPTFELIDAGRRSSEDVDLGQTEPLEEVKMNLGFGKGGGQADSGLWRLYALRCEELECIIREDFSPDAWEI 422 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7430.17600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7430.17600.1 >prot_M-pyrifera_M_contig7430.17600.1 ID=prot_M-pyrifera_M_contig7430.17600.1|Name=mRNA_M-pyrifera_M_contig7430.17600.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp SSYYVSPVTVEIKHSREVEPAVYDREVTLSVLGREFCVAKSLVVLHSPECback to top mRNA from alignment at M-pyrifera_M_contig7430:8384..9478- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7430.17600.1 ID=mRNA_M-pyrifera_M_contig7430.17600.1|Name=mRNA_M-pyrifera_M_contig7430.17600.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1095bp|location=Sequence derived from alignment at M-pyrifera_M_contig7430:8384..9478- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7430:8384..9478- >mRNA_M-pyrifera_M_contig7430.17600.1 ID=mRNA_M-pyrifera_M_contig7430.17600.1|Name=mRNA_M-pyrifera_M_contig7430.17600.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=744bp|location=Sequence derived from alignment at M-pyrifera_M_contig7430:8384..9478- (Macrocystis pyrifera P11B4 male)back to top |