mRNA_M-pyrifera_M_contig74290.17594.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig74290.17594.1 vs. uniprot
Match: A0A813B405_9DINO (Beta-amylase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813B405_9DINO) HSP 1 Score: 128 bits (322), Expect = 1.060e-33 Identity = 62/100 (62.00%), Postives = 77/100 (77.00%), Query Frame = 1 Query: 4 AGLCFTALEMQDDEQPASCDCGPYELVRQVKQASIDANTPFSGENALPRFDQTAYSTIETQATALGKDIDDFTYLRLGPKLLDQSNFGTFEAFVSKMKSL 303 A + FT LEM+D+EQP+ CDCGPYELV+QVK A+ A F+GENALPR+D TAY TIETQA++LG I+DFTYLRL LL +NFG+F FV +M +L Sbjct: 267 AVIDFTCLEMRDNEQPSDCDCGPYELVQQVKGAAHTAGIGFAGENALPRYDATAYGTIETQASSLGFLINDFTYLRLSDTLLQSNNFGSFRNFVQQMANL 366
BLAST of mRNA_M-pyrifera_M_contig74290.17594.1 vs. uniprot
Match: A0A7S1C583_9STRA (Beta-amylase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C583_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.530e-31 Identity = 58/94 (61.70%), Postives = 73/94 (77.66%), Query Frame = 1 Query: 16 FTALEMQDDEQPASCDCGPYELVRQVKQASIDANTPFSGENALPRFDQTAYSTIETQATALGKDIDDFTYLRLGPKLLDQSNFGTFEAFVSKMK 297 FT +EM+D++QPASC CGP+ELV+Q K A+ A F+GENALPR+DQTAY+TI Q+T+ G DI+DFTYLRLGP LL N+ TF FV+ MK Sbjct: 394 FTCMEMEDNQQPASCACGPFELVQQAKTAADSAGIAFAGENALPRYDQTAYNTIIQQSTSGGHDIEDFTYLRLGPTLLGGGNWNTFTNFVNAMK 487
BLAST of mRNA_M-pyrifera_M_contig74290.17594.1 vs. uniprot
Match: F4Q0T3_CAVFA (Beta-amylase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q0T3_CAVFA) HSP 1 Score: 112 bits (279), Expect = 1.350e-26 Identity = 59/101 (58.42%), Postives = 69/101 (68.32%), Query Frame = 1 Query: 1 NAGLCFTALEMQDDEQPASCDCGPYELVRQVKQASIDANTPFSGENALPRFDQTAYSTIETQATALGKDIDDFTYLRLGPKLLDQSNFGTFEAFVSKMKSL 303 N FT LEM DDEQP+ C+C P ELV Q KQ++ A +SGENALPR+DQ AYS IET++T L ID F+YLRL LL SNF F+ FVS MKSL Sbjct: 607 NVSFDFTCLEMTDDEQPSYCECRPQELVAQTKQSAQQAGIGYSGENALPRYDQGAYSEIETEST-LYFLIDGFSYLRLSSDLLSSSNFPLFQQFVSTMKSL 706
BLAST of mRNA_M-pyrifera_M_contig74290.17594.1 vs. uniprot
Match: D3AW45_POLPP (Beta-amylase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AW45_POLPP) HSP 1 Score: 102 bits (253), Expect = 4.220e-23 Identity = 53/96 (55.21%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 16 FTALEMQDDEQPASCDCGPYELVRQVKQASIDANTPFSGENALPRFDQTAYSTIETQATALGKDIDDFTYLRLGPKLLDQSNFGTFEAFVSKMKSL 303 FT LEM+D EQPASC C P ELV Q KQA++ A +SGENAL R+DQ AYS IE ++T I F+YLRL LL F F++FVS M SL Sbjct: 513 FTCLEMRDSEQPASCLCRPEELVGQTKQAAMQAQISYSGENALQRYDQAAYSEIEYESTRYNFLISGFSYLRLDDYLLSSQAFPLFQSFVSTMSSL 608
BLAST of mRNA_M-pyrifera_M_contig74290.17594.1 vs. uniprot
Match: A0A151Z5C2_9MYCE (Beta-amylase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z5C2_9MYCE) HSP 1 Score: 98.6 bits (244), Expect = 4.640e-22 Identity = 49/101 (48.51%), Postives = 65/101 (64.36%), Query Frame = 1 Query: 1 NAGLCFTALEMQDDEQPASCDCGPYELVRQVKQASIDANTPFSGENALPRFDQTAYSTIETQATALGKDIDDFTYLRLGPKLLDQSNFGTFEAFVSKMKSL 303 N FT LEM+D EQP++C+CGP +LV Q ++ A +SGENAL R+D TAY IE +++ L I F+YLRL P+LL N GTF +FV M +L Sbjct: 351 NVSFDFTCLEMRDSEQPSNCECGPQQLVAQTLLSAESAGVKYSGENALQRYDSTAYQEIEIESS-LYYLISGFSYLRLTPQLLQSPNIGTFASFVQTMSTL 450
BLAST of mRNA_M-pyrifera_M_contig74290.17594.1 vs. uniprot
Match: A0A7S1Q1P8_ALECA (Beta-amylase n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1Q1P8_ALECA) HSP 1 Score: 90.9 bits (224), Expect = 1.370e-21 Identity = 47/94 (50.00%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 16 FTALEMQDDEQPASCDCGPYELVRQVKQASIDANTPFSGENALPRFDQTAYSTIETQATALGKDIDDFTYLRLGPKLLDQSNFGTFEAFVSKMK 297 FT LEM++ QPA C P +LV+QV A + P SGENAL R+D AYS I + + DI+ FTYLRLGPKL++ +N+ F+ FV+KMK Sbjct: 2 FTCLEMRNSGQPARCLSRPEDLVQQVLYAGKEKGVPVSGENALQRYDNWAYSKILSYRS----DIEAFTYLRLGPKLVEPANYARFKTFVAKMK 91
BLAST of mRNA_M-pyrifera_M_contig74290.17594.1 vs. uniprot
Match: A0A812W193_9DINO (Beta-amylase n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812W193_9DINO) HSP 1 Score: 96.3 bits (238), Expect = 2.830e-21 Identity = 51/99 (51.52%), Postives = 62/99 (62.63%), Query Frame = 1 Query: 4 AGLCFTALEMQDDEQPASCDCGPYELVRQVKQASIDANTPFSGENALPRFDQTAYSTIETQATALGKDIDDFTYLRLGPKLLDQSNFGTFEAFVSKMKS 300 AG+ FT +EM D EQ A C GP ELV+QV A+ GENALPRFD TAYS IE+ + + FTYLRLG LL+ N+ F++FVSKM S Sbjct: 333 AGVDFTCMEMADSEQSADCASGPEELVKQVMAATASHGIALGGENALPRFDDTAYSKIESYKSGM----QVFTYLRLGNDLLNGDNWNRFQSFVSKMHS 427
BLAST of mRNA_M-pyrifera_M_contig74290.17594.1 vs. uniprot
Match: A0A6B2L506_9EUKA (Beta-amylase n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L506_9EUKA) HSP 1 Score: 94.4 bits (233), Expect = 1.340e-20 Identity = 49/97 (50.52%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 16 FTALEMQDDEQPA-SCDCGPYELVRQVKQASIDANTPFSGENALPRFDQTAYSTIETQATALGKDIDDFTYLRLGPKLLDQSNFGTFEAFVSKMKSL 303 FT LEM+D EQP SC C P LV Q A+ + + GENALPR+DQTAY+TI+ ++ +G I FTYLRLG L+ +NF TF +FV++M +L Sbjct: 329 FTCLEMRDSEQPGGSCCCSPENLVYQTLVAAKNNGIVYKGENALPRYDQTAYNTIKYESNRVGP-IGGFTYLRLGDTLMQSNNFQTFSSFVNQMHNL 424
BLAST of mRNA_M-pyrifera_M_contig74290.17594.1 vs. uniprot
Match: A0A8J4PSC2_9MYCE (Beta-amylase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PSC2_9MYCE) HSP 1 Score: 93.2 bits (230), Expect = 3.490e-20 Identity = 49/101 (48.51%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 1 NAGLCFTALEMQDDEQPASCDCGPYELVRQVKQASIDANTPFSGENALPRFDQTAYSTIETQATALGKDIDDFTYLRLGPKLLDQSNFGTFEAFVSKMKSL 303 N FT LEM+D EQP+ C+CGP ELV Q ++ +SGENALPR+DQ AYS IE Q++ I F+YLRL LL N F FV M SL Sbjct: 320 NVAFDFTCLEMRDSEQPSYCECGPQELVSQTLLSAQSQGVVYSGENALPRYDQQAYSEIEYQSSRYYL-ISSFSYLRLSDTLLTSQNLPLFAQFVQSMNSL 419
BLAST of mRNA_M-pyrifera_M_contig74290.17594.1 vs. uniprot
Match: A0A812V1P2_9DINO (Beta-amylase n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812V1P2_9DINO) HSP 1 Score: 91.7 bits (226), Expect = 1.220e-19 Identity = 48/99 (48.48%), Postives = 60/99 (60.61%), Query Frame = 1 Query: 4 AGLCFTALEMQDDEQPASCDCGPYELVRQVKQASIDANTPFSGENALPRFDQTAYSTIETQATALGKDIDDFTYLRLGPKLLDQSNFGTFEAFVSKMKS 300 A + FT +EM D EQ A C GP ELV+QV +A+ GENALPRFD TAY IE+ + + + FTYLRLG LL+ N+ F+ FVS M S Sbjct: 312 ASIDFTCMEMADSEQSADCASGPEELVQQVMKATRSRGIALGGENALPRFDDTAYGKIESYKSGM----EVFTYLRLGSDLLNGDNWNRFQGFVSNMHS 406 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74290.17594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig74290.17594.1 >prot_M-pyrifera_M_contig74290.17594.1 ID=prot_M-pyrifera_M_contig74290.17594.1|Name=mRNA_M-pyrifera_M_contig74290.17594.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=92bp MQDDEQPASCDCGPYELVRQVKQASIDANTPFSGENALPRFDQTAYSTIEback to top mRNA from alignment at M-pyrifera_M_contig74290:766..1071- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig74290.17594.1 ID=mRNA_M-pyrifera_M_contig74290.17594.1|Name=mRNA_M-pyrifera_M_contig74290.17594.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=306bp|location=Sequence derived from alignment at M-pyrifera_M_contig74290:766..1071- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig74290:766..1071- >mRNA_M-pyrifera_M_contig74290.17594.1 ID=mRNA_M-pyrifera_M_contig74290.17594.1|Name=mRNA_M-pyrifera_M_contig74290.17594.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig74290:766..1071- (Macrocystis pyrifera P11B4 male)back to top |