mRNA_M-pyrifera_M_contig74286.17591.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74286.17591.1
Unique NamemRNA_M-pyrifera_M_contig74286.17591.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig74286.17591.1 vs. uniprot
Match: A0A0K3AX97_9PSEU (Putative integral membrane efflux protein n=1 Tax=Kibdelosporangium sp. MJ126-NF4 TaxID=703222 RepID=A0A0K3AX97_9PSEU)

HSP 1 Score: 121 bits (303), Expect = 4.010e-28
Identity = 87/286 (30.42%), Postives = 143/286 (50.00%), Query Frame = 1
Query:    1 SDVFGHKKLAIGGLAVFLVSSVIAAYANSMSMLILARILQGVGGALFVPSLYVLISQVFVKEEQGFAMGFLSVGVGFGAALGPMLGGFLLTYFGWRSIFWINVPICLFVIAILMRSESVITSDKKVQSLSQSLLALSRNRGYLGCVITFFLEQYGFACFVVGLGLYLQNVLDLGVLQTSVVFMSLTLTFGLFAIIAGRWNDKYGIQKTTVIGLSMVALVSFAFSQLSLNSSLTYISIAMAIAGVGMALAFAALNSGVVKILDPADVGIGSSFFSMLALAGNFIGVS 858
            +D  GH+ + + GL VF V+S+  A A  +++LI+AR +QGVGGA    S + LI + +   E+G A+G      G  AA GPMLGG L  Y GWR+IF +N+P+ L  +A+   S + +   +  +     L AL RN  +   V+   +    FAC V    ++LQ+ L LG +   +  + L L+  + + +AGR       +    +GL +    S   + L + S+ T I   + ++G+GM L   A+ + +   +    VGI     +     G  +GV+
Sbjct:   64 ADRHGHRAVYLAGLGVFAVASLACALAPHITVLIIARGVQGVGGAAMAVSTFALIGRSYDGRERGIALGIWGAVNGLAAAAGPMLGGVLTQYLGWRAIFVVNLPLALLAVALTHASVTAVPGHRGKRFDLAGLRALLRNATFTALVLCGIIAASVFACLVYT-SVWLQDTLRLGPVAAGLAMVPLALSTFVASTLAGRAPRSVPPRIMIALGLLLGGAGSALQAGLGVGSTATAILAGLVVSGIGMGLLIPAMGTVLFSSVPAEHVGIAVGVSTTARQFGQTLGVA 348          
BLAST of mRNA_M-pyrifera_M_contig74286.17591.1 vs. uniprot
Match: A0A249SQ29_9BACT (MFS transporter n=1 Tax=Chitinophaga sp. MD30 TaxID=2033437 RepID=A0A249SQ29_9BACT)

HSP 1 Score: 122 bits (306), Expect = 4.110e-28
Identity = 90/339 (26.55%), Postives = 154/339 (45.43%), Query Frame = 1
Query:   13 GHKKLAIGGLAVFLVSSVIAAYANSMSMLILARILQGVGGALFVPSLYVLISQVFVKEEQGFAMGFLSVGVGFGAALGPMLGGFLLTYFGWRSIFWINVPICLFVIAILMRSESVITSDKKVQ-------------------------------------SLSQSLLALS-------------------RNRGYLGCVITFFLEQYGFACFVVGLGLYLQNVLDLGVLQTSVVFMSLTLTFGLFAIIAGRWNDKYGIQKTTVIGLSMVALVSFAFSQLSLNSSLTYISIAMAIAGVGMALAFAALNSGVVKILDPADVGIGSSFFSMLALAGNFIGVSV 861
            G   L I  + +F + SV+ A + S+  L++AR++Q +GG    P    ++S VF    +G  +G+  +G   G A+GP LGGFL  +FGW SIF+IN+PI +  IA+  R    +     V+                                     SL+ +++AL                    RN  ++ C++            +  L   LQ +L      + ++ +   L        AG+W+DK+G +K +++GL+++AL  + FS L   S +  I  AM+I G+GM L  A L++  +  + PA+V + S+  S+L   G  +G++V
Sbjct:   71 GFFNLYIAAIGLFTLGSVLCALSGSLETLLIARVIQALGGGAIAPVSMAIVSYVFPARVRGSVLGWWGLGNLMGPAMGPTLGGFLTEHFGWPSIFFINLPIGIIAIALSFRYLGFLRQQVMVKIPFDLSGFVAFTIFLITLQYGIAKAERIGWTGPQILISLAVAIVALVCFIFIERKKEFPLIDLQLFRNYAFVSCILVTISRSAALFGGLFLLPFLLQGLLGYSESASGLLILPNALLMAALMPFAGKWSDKHGSRKISMVGLALLALSMWMFSLLDQGSPIALILTAMSIRGIGMGLLVAPLSAATISAVRPAEVTMASAVSSLLQQVGGALGIAV 409          
BLAST of mRNA_M-pyrifera_M_contig74286.17591.1 vs. uniprot
Match: A0A355VVV2_9PROT (MFS domain-containing protein (Fragment) n=1 Tax=Holosporales bacterium TaxID=2053559 RepID=A0A355VVV2_9PROT)

HSP 1 Score: 112 bits (280), Expect = 7.610e-26
Identity = 60/140 (42.86%), Postives = 89/140 (63.57%), Query Frame = 1
Query:    1 SDVFGHKKLAIGGLAVFLVSSVIAAYANSMSMLILARILQGVGGALFVPSLYVLISQVFVKEEQGFAMGFLSVGVGFGAALGPMLGGFLLTYFGWRSIFWINVPICLFVIAILM---RSESVITSDKKVQSLSQSLLALS 411
            +D++G ++L + G++VF ++S++     S  +LI AR+LQG GGALFVP LY L+ + F ++ +GFA+G L VG   G A+GP  GG++L  FGWR IF IN P+CL  I ++M     E    SD KV +    LL ++
Sbjct:   71 ADIYGKRRLLLWGVSVFALASLLCGILTSAPLLIFARVLQGFGGALFVPPLYALVFECFPEKSRGFAIGMLGVGAAIGLAIGPSFGGYILANFGWRWIFLINGPLCLITITMIMLCVAKEPKRISDGKVDTQGGLLLGVA 210          
BLAST of mRNA_M-pyrifera_M_contig74286.17591.1 vs. uniprot
Match: A0A7L4QSK7_9ARCH (MFS transporter n=2 Tax=Methanomassiliicoccales archaeon TaxID=1906667 RepID=A0A7L4QSK7_9ARCH)

HSP 1 Score: 112 bits (279), Expect = 1.940e-24
Identity = 91/346 (26.30%), Postives = 163/346 (47.11%), Query Frame = 1
Query:    1 SDVFGHKKLAIGGLAVFLVSSVIAAYANSMSMLILARILQGVGGALFVPSLYVLISQVFVKEEQGFAMGFLSVGVGFGAALGPMLGGFLLTYFGWRSIFWINVPICLFVIAI---LMRSESVITSDKKVQ---------SLSQSL--LALSRNRGYLG------------CVITFFLEQ---------------------------------YGFACFVVGLGLYLQNVLDLGVLQTSVVFMSLTLTFGLFAIIAGRWNDKYGIQKTTVIGLSMVALVSFAFSQLSLNSSLTYISIAMAIAGVGMALAFAALNSGVVKILDPADVGIGSSFFSMLALAGNFIGVSV 861
            SD+ G K + +GG  +F++ S++ + + + + LI+ RI+QG+G A    +   +++ VF KEE+G A+G   + V  G +LGP LGG L   FGW+SIF+IN+PI + VIA+   +MR   + T  ++           +LS  L  L L    G++G            C I F L +                                 Y    F++    YLQ VLDL VL+   + +++ +T  + +  AG  +DK G +     G+ ++A      S + L+S + ++ + + I G+GM +  +   S V+  ++   +G+ S   + +   G  + +++
Sbjct:   50 SDIRGRKPVFVGGFLIFVLGSLLCSLSQTGAELIVFRIMQGIGAAFIGATATAIVTDVFPKEERGKALGVNVMAVYVGLSLGPPLGGILTHAFGWQSIFYINIPIGILVIALAMTIMRESKLETGRERFDVAGLVLFSVALSTLLVELTLGEQWGWIGLESVMLILISGLCWIGFILVERRMGQRALLDLRLFTHNRLFAYANLSALLNYASYFGVSFMISF--YLQQVLDLTVLEAGTILLTMPVTMAVLSPFAGWLSDKLGSRSLASGGMFIIAFGLLWLSFIGLSSPVWFVVMGLVIIGLGMGMFSSPNTSAVMGSVERRQLGVASGTVATMRFVGQSMSLAI 393          
BLAST of mRNA_M-pyrifera_M_contig74286.17591.1 vs. uniprot
Match: UPI001AE51A6B (MFS transporter n=1 Tax=Kibdelosporangium banguiense TaxID=1365924 RepID=UPI001AE51A6B)

HSP 1 Score: 110 bits (276), Expect = 2.610e-24
Identity = 83/290 (28.62%), Postives = 142/290 (48.97%), Query Frame = 1
Query:    1 SDVFGHKKLAIGGLAVFLVSSVIAAYANSMSMLILARILQGVGGALFVPSLYVLISQVFVKEEQGFAMGFLSVGVGFGAALGPMLGGFLLTYFGWRSIFWINVPICLFVIAILMRSESVITS-DKKVQSLSQSLLALSRNRGYLGCVITFFLEQYGFACFVVGLGLYLQNVLDLGVLQTSVVFMSLTLTFGLFAIIAGRWNDKYGIQKTTVIGLSMVALVSFAFSQLSLNSSLTYISI--AMAIAGVGMALAFAALNSGVVKILDPADVGIGSSFFSMLALAGNFIGVSV 861
            +D +GH+K+ + GL VFL +S +   A  + +LI AR +Q VGGA    + + LI   +   ++G AMG      G  AA GPMLGG L  ++ WR+IF IN+P+ +  +   +R  S   + DKK       L+ L R   +   ++   +    FAC V    ++LQ+ L LG ++  +  + L L+  + + +AGR    + +    +I   ++   +    Q  L+ S T +SI   + + GVG+ L   ++   ++  + P   GI     +     G  +GV+V
Sbjct:   64 ADRYGHRKVYLAGLGVFLAASFVCGVAPGIEVLIAARGVQAVGGAAMAVTTFALIGSCYSGRDRGVAMGIWGAVNGLAAAAGPMLGGVLTQFWSWRAIFLINLPLVVLTVVATLRIRSADGNRDKKFDLFG--LIGLFRGSSFNAIMVCTGVSASVFACLVYS-SVWLQSTLGLGPVRAGLALVPLALSIFVTSTLAGRL--LHDVTPRIMISAGLLLAGAGCALQAGLDESSTTVSILAGLVVTGVGVGLVMPSMGGALLGSVAPERFGIAVGAMTTCRQLGQSVGVAV 348          
BLAST of mRNA_M-pyrifera_M_contig74286.17591.1 vs. uniprot
Match: A0A1F9EB19_9DELT (MFS domain-containing protein n=2 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A1F9EB19_9DELT)

HSP 1 Score: 110 bits (276), Expect = 3.510e-24
Identity = 83/291 (28.52%), Postives = 148/291 (50.86%), Query Frame = 1
Query:    4 DVFGHKKLAIGGLAVFLVSSVIAAYANSMSMLILARILQGVGGALFVPSLYVLISQVFVKEEQGFAMGFLSVGVGFGAALGPMLGGFLLTYFGWRSIFWINVPICL---FVIAILMRSESVITSDKKVQSLSQSLLALSRNRGYLGCVITFFLEQYGFACFVVGL--GLYLQNVLDLGVLQTSVVFMSLTLTFGLFAIIAGRWNDKYGIQKTTVIGLSMVALVSFAFSQLSLNSSLTYISIAMAIAGVGMALAFAALNSGVVKILDPADVGIGSSFFSMLALAGNFIGVSV 861
            D +  KKL   GL  F +SS++  ++ ++  LI  R+LQG+GGA+F+     L+   F   E+G A+G + + V  G  LG  +GG L  Y  W++IF IN+PI +   F+    ++ E+  T + +    S     L +NR ++G  ++  L  Y  A F++      YL +VL+    +   V M+ +L F +   I+G  +DK G Q  + +GL++  +     SQL+  S+   + + +   GV   L  A  NS ++  +  + +G+ S+  + +   G  +GV++
Sbjct:   69 DQWNKKKLFRIGLIAFTLSSLLCPFSQTVFQLIFFRVLQGMGGAIFMSIAPALLVSSFPSSERGRAVGMMGMTVSTGLMLGAPVGGLLTDYISWKAIFLINLPIGVLGFFLAEKFLQEETHCTEEFRFLDFS-----LFKNRFFVGGNLS--LLSYFIALFILYFLTPFYLSDVLEYSPKKVGFVMMTFSLAFAVVTPISGWLSDKVGSQILSPMGLALAVVAYLCASQLTAASTPKEVVLTLLFVGVAAGLFQAPNNSAILGAVKKSQLGVASALIATMRTFGTMLGVAI 352          
BLAST of mRNA_M-pyrifera_M_contig74286.17591.1 vs. uniprot
Match: A0A1F8LYZ0_9CHLR (MFS transporter n=1 Tax=Chloroflexi bacterium RBG_13_50_10 TaxID=1797622 RepID=A0A1F8LYZ0_9CHLR)

HSP 1 Score: 107 bits (266), Expect = 1.310e-22
Identity = 66/193 (34.20%), Postives = 108/193 (55.96%), Query Frame = 1
Query:    1 SDVFGHKKLAIGGLAVFLVSSVIAAYANSMSMLILARILQGVGGALFVPSLYVLISQVFVKEEQGFAMGFLSVGVGFGAALGPMLGGFLLTYFGWRSIFWINVPICLFVIAIL---MRSESVITSDKKVQ---SLSQSLLALSRNRGY-----LGCVITFFLEQYGFACFVVGLGLYLQNVLDLGVLQTSVVF 546
            +D++G K++   G+  + V+SV++A + S +MLI  ++LQG+GGA+   +   +++ VF  EE+G A+G     V  G +LGP LGG L  +FGWRSIFW+NVP+CL +IA+L   ++ E      +K     S+  SL+ ++   G+     +  V        GF  F+         VLD+G+ + + VF
Sbjct:   77 ADIYGRKRIFTYGVLTYAVASVLSAISTSATMLISVQVLQGIGGAMIFGTAVAIVTSVFPAEERGRALGINVAAVYIGLSLGPFLGGLLTQHFGWRSIFWVNVPLCLLIIALLFWKLKGEWAEAKGEKFDVAGSIIYSLMLIAIMYGFTLLPEIAGVALILAGAAGFVAFIRWETKVKSPVLDIGLFRNNTVF 269          
BLAST of mRNA_M-pyrifera_M_contig74286.17591.1 vs. uniprot
Match: U2ZHF0_VIBPR (Putative drug resistance transporter n=5 Tax=Vibrio TaxID=662 RepID=U2ZHF0_VIBPR)

HSP 1 Score: 105 bits (261), Expect = 4.050e-22
Identity = 87/290 (30.00%), Postives = 144/290 (49.66%), Query Frame = 1
Query:    4 DVFGHKKLAIGGLAVFLVSSVIAAYANSMSMLILARILQGVGGALFVPSLYVLISQVFVKEEQGFAMGFLSVGVGFGAALGPMLGGFLLTYFGWRSIFWINVPICLFVIAILMRSESVITSDKKVQSLSQS-LLALSRNRGYL-GCVITFFLEQYGFACFVVGLGLYLQNVLDLGVLQTSVVFMSLTLTFGLFAIIAGRWNDKYGIQKTTVIGL--SMVALVSFAFSQLSLNSSLTYISIAMAIAGVGMALAFAALNSGVVKILDPADVGIGSSFFSMLALAGNFIGVSV 861
            D FG K L + GL +FLV +V    ++++ +LI AR +QGVG AL +      +S +    + G  MG L      G ALGP+LGG L+++F W +IF+++VP+ +    +L R      S+    S++ S ++ L +N   L  C+  F +     +  VVG   YL N L L   +  ++     +   +    AG+  D+ G       GL   +V  +S A S  S  S+L Y++ ++ +   G A+  AA N+ V+K +  ++ GI S+  +    +G   G SV
Sbjct:   80 DRFGRKSLVLKGLGIFLVGTVGCVLSDNLVLLIAARAIQGVGAALLMSLAMSFVSDLVPSSKMGSVMGLLGTTSAVGTALGPVLGGVLISHFHWNTIFYVSVPVGILAYVLLSRLLPHSASEVPSTSIAASWVIQLQQNHHLLRSCMANFLVSAVIMSTMVVG-PFYLSNGLQLSPEKVGLLMAIGPIVAAIAGAPAGQLTDRKGAAFVICAGLISMIVGCLSIALSAQS-TSTLGYMA-SLVLITAGYAMFQAANNTAVMKNVKKSNKGITSALLNFSRNSGLMTGASV 366          
BLAST of mRNA_M-pyrifera_M_contig74286.17591.1 vs. uniprot
Match: A0A328P8E0_9EURY (MFS transporter n=4 Tax=Methanobacteriales TaxID=2158 RepID=A0A328P8E0_9EURY)

HSP 1 Score: 105 bits (262), Expect = 5.270e-22
Identity = 66/166 (39.76%), Postives = 98/166 (59.04%), Query Frame = 1
Query:    1 SDVFGHKKLAIGGLAVFLVSSVIAAYANSMSMLILARILQGVGGALFVPSLYVLISQVFVKEEQGFAMGFLSVGVGFGAALGPMLGGFLLTYFGWRSIFWINVP---ICLFVIAILMRSESVITSDKKVQSLSQSLLALSRNRGYLGCVITFFLEQYGFACFVVGL 489
            +D++G +++   G+ +F VSS+ A ++ S  ML+L R++QGVGGA+   ++  +I  VF   E+G+A+G+ + G  FG   GP LGGFL  YFGWRSIF+ NVP   IC +    ++ SE     D++   L   L+ALS     +G     F   YGF  FVVG+
Sbjct:  107 ADIYGRRRVFQFGIIIFTVSSIFAGFSISAEMLLLLRVIQGVGGAMIFSNVSAIIYSVFPPFERGYALGWAATGTYFGLFFGPTLGGFLTQYFGWRSIFYFNVPLGVICAYATGRIV-SEWREAEDEEFDLLGAFLMALSLIFVLVGFSSIIF--YYGFLLFVVGI 269          
BLAST of mRNA_M-pyrifera_M_contig74286.17591.1 vs. uniprot
Match: A0A7K0J2D4_9DELT (MFS transporter n=1 Tax=Geobacter sp. TaxID=46610 RepID=A0A7K0J2D4_9DELT)

HSP 1 Score: 105 bits (262), Expect = 5.270e-22
Identity = 91/341 (26.69%), Postives = 149/341 (43.70%), Query Frame = 1
Query:    4 DVFGHKKLAIGGLAVFLVSSVIAAYANSMSMLILARILQGVGGALFVPSLYVLISQVFVKEEQGFAMGFLSVGVGFGAALGPMLGGFLLTYFGWRSIFWINVPICLFVIAILMRSESVITSDKKVQ--------------SLSQSLLALSRNRGYLGCVITFFL--EQYGFACFVVG----------LGLYLQNVLDLGVLQTSVVFMSLTLTF-----------------------------GLFAIIAGRWNDKYGIQKTTVIGLSMVALVSFAFSQLSLNSSLTYISIAMAIAGVGMALAFAALNSGVVKILDPADVGIGSSFFSMLALAGNFIGVSV 861
            D+ G ++L + G+ +F  +SV++  A  + +LI AR +QG+GGA+ +     +I +   KE+ G AMG L      G ALGP LGG L+  FGWR+IF IN+P+ L    +  R   V   + K                +L+   LA++  RG  G +    L     GF  FV+           L ++   +L   +  +++V   +T T                               L A+ AGR+ D++G  + T++GL ++A  SF  + L     ++     +AI   G +L   A N+ V+  + P   G+ S   ++    G   G SV
Sbjct:   84 DIIGRRRLLLTGIFLFTAASVLSGVAPMLWLLIAARAVQGLGGAIMMALTMAIIGETVPKEKTGSAMGLLGTMSAIGTALGPSLGGVLIAGFGWRTIFLINIPLGLLTFILAQRYLPVDHQEPKSDWAGFDNLGTLLLALTLAAYALAVTIGRGSFGSLNMALLLAAALGFGLFVLAEARAATPLIRLAIFRDPLLSASLTMSTLVATVVTTTLVVGPFYLSIALGLDAAMVGFVLSVGPLAAALTAVPAGRFADRFGTHRMTIVGLMIMAAGSFILAMLPATLGISGFITPIAIITGGYSLFQTANNTAVMADISPGQRGVISGMLNLSRNLGRLTGASV 424          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74286.17591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0K3AX97_9PSEU4.010e-2830.42Putative integral membrane efflux protein n=1 Tax=... [more]
A0A249SQ29_9BACT4.110e-2826.55MFS transporter n=1 Tax=Chitinophaga sp. MD30 TaxI... [more]
A0A355VVV2_9PROT7.610e-2642.86MFS domain-containing protein (Fragment) n=1 Tax=H... [more]
A0A7L4QSK7_9ARCH1.940e-2426.30MFS transporter n=2 Tax=Methanomassiliicoccales ar... [more]
UPI001AE51A6B2.610e-2428.62MFS transporter n=1 Tax=Kibdelosporangium banguien... [more]
A0A1F9EB19_9DELT3.510e-2428.52MFS domain-containing protein n=2 Tax=unclassified... [more]
A0A1F8LYZ0_9CHLR1.310e-2234.20MFS transporter n=1 Tax=Chloroflexi bacterium RBG_... [more]
U2ZHF0_VIBPR4.050e-2230.00Putative drug resistance transporter n=5 Tax=Vibri... [more]
A0A328P8E0_9EURY5.270e-2239.76MFS transporter n=4 Tax=Methanobacteriales TaxID=2... [more]
A0A7K0J2D4_9DELT5.270e-2226.69MFS transporter n=1 Tax=Geobacter sp. TaxID=46610 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74286contigM-pyrifera_M_contig74286:6..878 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score136.0
Seed ortholog evalue2.9e-29
Seed eggNOG ortholog244581.IM40_07305
Preferred namenorB
KEGG koko:K08170
KEGG TC2.A.1.3.23,2.A.1.3.59
KEGG ModuleM00702
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944
EggNOG free text desc.Major Facilitator Superfamily
EggNOG OGs1R9HD@1224,COG0477@1,COG0477@2
COG Functional cat.EGP
Best tax levelProteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00002,ko01504,ko02000
Exons1
Model size873
Cds size873
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816641.3018575-CDS-M-pyrifera_M_contig74286:5..8781622816641.3018575-CDS-M-pyrifera_M_contig74286:5..878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74286 6..878 +
1692278093.7299545-CDS-M-pyrifera_M_contig74286:5..8781692278093.7299545-CDS-M-pyrifera_M_contig74286:5..878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74286 6..878 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74286.17591.1prot_M-pyrifera_M_contig74286.17591.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74286 6..878 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74286.17591.1

>prot_M-pyrifera_M_contig74286.17591.1 ID=prot_M-pyrifera_M_contig74286.17591.1|Name=mRNA_M-pyrifera_M_contig74286.17591.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=291bp
SDVFGHKKLAIGGLAVFLVSSVIAAYANSMSMLILARILQGVGGALFVPS
LYVLISQVFVKEEQGFAMGFLSVGVGFGAALGPMLGGFLLTYFGWRSIFW
INVPICLFVIAILMRSESVITSDKKVQSLSQSLLALSRNRGYLGCVITFF
LEQYGFACFVVGLGLYLQNVLDLGVLQTSVVFMSLTLTFGLFAIIAGRWN
DKYGIQKTTVIGLSMVALVSFAFSQLSLNSSLTYISIAMAIAGVGMALAF
AALNSGVVKILDPADVGIGSSFFSMLALAGNFIGVSVTVYL
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mRNA from alignment at M-pyrifera_M_contig74286:6..878+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74286.17591.1 ID=mRNA_M-pyrifera_M_contig74286.17591.1|Name=mRNA_M-pyrifera_M_contig74286.17591.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=873bp|location=Sequence derived from alignment at M-pyrifera_M_contig74286:6..878+ (Macrocystis pyrifera P11B4 male)
TCTGATGTCTTTGGTCATAAAAAATTAGCCATAGGTGGTTTGGCCGTATT TCTAGTCTCATCAGTTATAGCCGCATATGCGAACAGCATGAGCATGCTGA TTTTAGCGCGGATATTGCAAGGTGTTGGTGGTGCACTATTTGTCCCAAGT CTTTACGTATTAATTTCACAAGTTTTTGTGAAAGAAGAGCAAGGTTTTGC AATGGGCTTTTTGAGTGTTGGTGTGGGCTTTGGTGCTGCACTGGGTCCAA TGCTAGGCGGCTTTTTGCTAACCTACTTCGGGTGGCGCAGTATTTTTTGG ATCAATGTTCCTATTTGTCTGTTTGTTATCGCTATTCTAATGCGCAGTGA GTCAGTAATAACTTCTGATAAGAAAGTTCAATCATTATCTCAGAGCTTAT TAGCGTTATCTCGCAACCGTGGATACCTTGGTTGTGTTATTACTTTTTTT CTTGAGCAATATGGTTTTGCCTGTTTTGTAGTTGGATTAGGTCTTTACTT ACAAAACGTACTCGACCTTGGAGTATTACAAACGAGTGTTGTTTTTATGT CTCTGACTTTGACATTTGGCTTATTTGCTATTATTGCAGGACGTTGGAAT GATAAATACGGTATCCAAAAAACCACGGTTATAGGTTTGAGTATGGTTGC TCTTGTTTCATTCGCCTTTTCTCAATTGTCTCTCAACAGTTCGTTAACTT ATATTTCTATCGCCATGGCTATTGCAGGTGTTGGTATGGCATTGGCTTTT GCAGCATTGAATTCTGGGGTTGTTAAAATATTGGATCCGGCAGACGTTGG GATAGGCTCAAGCTTTTTTTCAATGTTAGCTCTAGCAGGAAACTTTATAG GTGTATCTGTTACCGTCTATCTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74286:6..878+

>mRNA_M-pyrifera_M_contig74286.17591.1 ID=mRNA_M-pyrifera_M_contig74286.17591.1|Name=mRNA_M-pyrifera_M_contig74286.17591.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1746bp|location=Sequence derived from alignment at M-pyrifera_M_contig74286:6..878+ (Macrocystis pyrifera P11B4 male)
TCTGATGTCTTTGGTCATAAAAAATTAGCCATAGGTGGTTTGGCCGTATT
TCTAGTCTCATCAGTTATAGCCGCATATGCGAACAGCATGAGCATGCTGA
TTTTAGCGCGGATATTGCAAGGTGTTGGTGGTGCACTATTTGTCCCAAGT
CTTTACGTATTAATTTCACAAGTTTTTGTGAAAGAAGAGCAAGGTTTTGC
AATGGGCTTTTTGAGTGTTGGTGTGGGCTTTGGTGCTGCACTGGGTCCAA
TGCTAGGCGGCTTTTTGCTAACCTACTTCGGGTGGCGCAGTATTTTTTGG
ATCAATGTTCCTATTTGTCTGTTTGTTATCGCTATTCTAATGCGCAGTGA
GTCAGTAATAACTTCTGATAAGAAAGTTCAATCATTATCTCAGAGCTTAT
TAGCGTTATCTCGCAACCGTGGATACCTTGGTTGTGTTATTACTTTTTTT
CTTGAGCAATATGGTTTTGCCTGTTTTGTAGTTGGATTAGGTCTTTACTT
ACAAAACGTACTCGACCTTGGAGTATTACAAACGAGTGTTGTTTTTATGT
CTCTGACTTTGACATTTGGCTTATTTGCTATTATTGCAGGACGTTGGAAT
GATAAATACGGTATCCAAAAAACCACGGTTATAGGTTTGAGTATGGTTGC
TCTTGTTTCATTCGCCTTTTCTCAATTGTCTCTCAACAGTTCGTTAACTT
ATATTTCTATCGCCATGGCTATTGCAGGTGTTGGTATGGCATTGGCTTTT
GCAGCATTGAATTCTGGGGTTGTTAAAATATTGGATCCGGCAGACGTTGG
GATAGGCTCAAGCTTTTTTTCAATGTTAGCTCTAGCAGGAAACTTTATAG
GTGTATCTGTTACCGTCTATCTCTCTGATGTCTTTGGTCATAAAAAATTA
GCCATAGGTGGTTTGGCCGTATTTCTAGTCTCATCAGTTATAGCCGCATA
TGCGAACAGCATGAGCATGCTGATTTTAGCGCGGATATTGCAAGGTGTTG
GTGGTGCACTATTTGTCCCAAGTCTTTACGTATTAATTTCACAAGTTTTT
GTGAAAGAAGAGCAAGGTTTTGCAATGGGCTTTTTGAGTGTTGGTGTGGG
CTTTGGTGCTGCACTGGGTCCAATGCTAGGCGGCTTTTTGCTAACCTACT
TCGGGTGGCGCAGTATTTTTTGGATCAATGTTCCTATTTGTCTGTTTGTT
ATCGCTATTCTAATGCGCAGTGAGTCAGTAATAACTTCTGATAAGAAAGT
TCAATCATTATCTCAGAGCTTATTAGCGTTATCTCGCAACCGTGGATACC
TTGGTTGTGTTATTACTTTTTTTCTTGAGCAATATGGTTTTGCCTGTTTT
GTAGTTGGATTAGGTCTTTACTTACAAAACGTACTCGACCTTGGAGTATT
ACAAACGAGTGTTGTTTTTATGTCTCTGACTTTGACATTTGGCTTATTTG
CTATTATTGCAGGACGTTGGAATGATAAATACGGTATCCAAAAAACCACG
GTTATAGGTTTGAGTATGGTTGCTCTTGTTTCATTCGCCTTTTCTCAATT
GTCTCTCAACAGTTCGTTAACTTATATTTCTATCGCCATGGCTATTGCAG
GTGTTGGTATGGCATTGGCTTTTGCAGCATTGAATTCTGGGGTTGTTAAA
ATATTGGATCCGGCAGACGTTGGGATAGGCTCAAGCTTTTTTTCAATGTT
AGCTCTAGCAGGAAACTTTATAGGTGTATCTGTTACCGTCTATCTC
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