mRNA_M-pyrifera_M_contig74244.17583.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74244.17583.1
Unique NamemRNA_M-pyrifera_M_contig74244.17583.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig74244.17583.1 vs. uniprot
Match: D8LM01_ECTSI (Similar to insulin-degrading enzyme n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM01_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 6.860e-29
Identity = 53/64 (82.81%), Postives = 62/64 (96.88%), Query Frame = 1 
Query:    1 YTATESTNYYFDVKASELEGATDRFAQFFQTPLFADSSVERELQAVDSEHSNNKNDDSWRLYQV 192
            YTATESTNYYFDVK+S L GATDRFAQFF+TPLFA+S++ERE+QAVDSEHSNNKN+D+WR+YQV
Sbjct:  165 YTATESTNYYFDVKSSHLRGATDRFAQFFRTPLFAESAIEREMQAVDSEHSNNKNEDTWRIYQV 228
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BLAST of mRNA_M-pyrifera_M_contig74244.17583.1 vs. uniprot
Match: A0A367J2K5_RHIAZ (Insulinase (Peptidase M16) (Fragment) n=1 Tax=Rhizopus azygosporus TaxID=86630 RepID=A0A367J2K5_RHIAZ)

HSP 1 Score: 91.7 bits (226), Expect = 2.640e-20
Identity = 42/64 (65.62%), Postives = 51/64 (79.69%), Query Frame = 1 
Query:    1 YTATESTNYYFDVKASELEGATDRFAQFFQTPLFADSSVERELQAVDSEHSNNKNDDSWRLYQV 192
            +T+ E TNYYF+V  S LEGA DRFAQFF +PLF+DS  EREL+AVDSEH  NK  DSWR++Q+
Sbjct:  145 FTSVEDTNYYFEVAHSHLEGALDRFAQFFISPLFSDSCTERELKAVDSEHKKNKQQDSWRIFQL 208
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BLAST of mRNA_M-pyrifera_M_contig74244.17583.1 vs. uniprot
Match: A0A367K156_RHIAZ (Insulinase (Peptidase M16) (Fragment) n=1 Tax=Rhizopus azygosporus TaxID=86630 RepID=A0A367K156_RHIAZ)

HSP 1 Score: 91.7 bits (226), Expect = 4.770e-20
Identity = 42/64 (65.62%), Postives = 51/64 (79.69%), Query Frame = 1 
Query:    1 YTATESTNYYFDVKASELEGATDRFAQFFQTPLFADSSVERELQAVDSEHSNNKNDDSWRLYQV 192
            +T+ E TNYYF+V  S LEGA DRFAQFF +PLF+DS  EREL+AVDSEH  NK  DSWR++Q+
Sbjct:  298 FTSVEDTNYYFEVAHSHLEGALDRFAQFFISPLFSDSCTERELKAVDSEHKKNKQQDSWRIFQL 361
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BLAST of mRNA_M-pyrifera_M_contig74244.17583.1 vs. uniprot
Match: A0A2G4T949_RHIZD (A-pheromone processing metallopeptidase Ste23 n=4 Tax=Rhizopus TaxID=4842 RepID=A0A2G4T949_RHIZD)

HSP 1 Score: 91.7 bits (226), Expect = 5.710e-20
Identity = 42/64 (65.62%), Postives = 51/64 (79.69%), Query Frame = 1 
Query:    1 YTATESTNYYFDVKASELEGATDRFAQFFQTPLFADSSVERELQAVDSEHSNNKNDDSWRLYQV 192
            +T+ E TNYYF+V  S LEGA DRFAQFF +PLF+DS  EREL+AVDSEH  NK  DSWR++Q+
Sbjct:  116 FTSVEDTNYYFEVAHSHLEGALDRFAQFFISPLFSDSCTERELKAVDSEHKKNKQQDSWRIFQL 179
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BLAST of mRNA_M-pyrifera_M_contig74244.17583.1 vs. uniprot
Match: A0A507BNK7_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BNK7_9FUNG)

HSP 1 Score: 91.3 bits (225), Expect = 7.780e-20
Identity = 42/64 (65.62%), Postives = 50/64 (78.12%), Query Frame = 1 
Query:    1 YTATESTNYYFDVKASELEGATDRFAQFFQTPLFADSSVERELQAVDSEHSNNKNDDSWRLYQV 192
            +TA E TNYYFDV A+ LEGA DRFAQFF  PLF +++ +RELQAVDSEH  N   DSWRL+Q+
Sbjct:   99 FTAVEDTNYYFDVNANHLEGALDRFAQFFIAPLFLENTTDRELQAVDSEHKKNLQSDSWRLFQL 162
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BLAST of mRNA_M-pyrifera_M_contig74244.17583.1 vs. uniprot
Match: A0A8H7BRR7_9FUNG (Insulinase (Peptidase M16) n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BRR7_9FUNG)

HSP 1 Score: 90.5 bits (223), Expect = 1.450e-19
Identity = 41/64 (64.06%), Postives = 52/64 (81.25%), Query Frame = 1 
Query:    1 YTATESTNYYFDVKASELEGATDRFAQFFQTPLFADSSVERELQAVDSEHSNNKNDDSWRLYQV 192
            +T+ E+TNYYF+V    LEGA DRFAQFF +PLF+DS  EREL+AVDSEH  NK +DSWR++Q+
Sbjct:  115 FTSIENTNYYFEVGQEHLEGALDRFAQFFISPLFSDSCTERELRAVDSEHKKNKQNDSWRMFQL 178
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BLAST of mRNA_M-pyrifera_M_contig74244.17583.1 vs. uniprot
Match: A0A6U3RP04_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RP04_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.710e-19
Identity = 43/64 (67.19%), Postives = 49/64 (76.56%), Query Frame = 1 
Query:    1 YTATESTNYYFDVKASELEGATDRFAQFFQTPLFADSSVERELQAVDSEHSNNKNDDSWRLYQV 192
            YT  ESTNYYFDV A +LEGA DRFAQFF +PLF +SS  RE+QAVDSEH  N   D WRL+Q+
Sbjct:  120 YTDMESTNYYFDVNADKLEGALDRFAQFFISPLFNESSTSREMQAVDSEHCKNLQSDFWRLFQL 183
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BLAST of mRNA_M-pyrifera_M_contig74244.17583.1 vs. uniprot
Match: A8X9D3_CAEBR (Protein CBG09322 n=3 Tax=Caenorhabditis TaxID=6237 RepID=A8X9D3_CAEBR)

HSP 1 Score: 89.7 bits (221), Expect = 2.710e-19
Identity = 42/64 (65.62%), Postives = 50/64 (78.12%), Query Frame = 1 
Query:    1 YTATESTNYYFDVKASELEGATDRFAQFFQTPLFADSSVERELQAVDSEHSNNKNDDSWRLYQV 192
            YTAT+ TNY+FDVK  +L GA DRF QFF +P F +S+ ERE+ AVDSEHSNN N+DSWR  QV
Sbjct:  160 YTATDHTNYHFDVKPDQLSGALDRFVQFFLSPQFTESATEREVCAVDSEHSNNLNNDSWRFLQV 223
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BLAST of mRNA_M-pyrifera_M_contig74244.17583.1 vs. uniprot
Match: A0A260ZZH2_9PELO (Uncharacterized protein (Fragment) n=1 Tax=Caenorhabditis latens TaxID=1503980 RepID=A0A260ZZH2_9PELO)

HSP 1 Score: 89.7 bits (221), Expect = 2.710e-19
Identity = 42/64 (65.62%), Postives = 50/64 (78.12%), Query Frame = 1 
Query:    1 YTATESTNYYFDVKASELEGATDRFAQFFQTPLFADSSVERELQAVDSEHSNNKNDDSWRLYQV 192
            YTAT+ TNY+FDVK  +L GA DRF QFF +P F +S+ ERE+ AVDSEHSNN N+DSWR  QV
Sbjct:  103 YTATDHTNYHFDVKPEQLSGALDRFVQFFLSPQFTESATEREVCAVDSEHSNNLNNDSWRFLQV 166
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BLAST of mRNA_M-pyrifera_M_contig74244.17583.1 vs. uniprot
Match: E3LUF3_CAERE (Uncharacterized protein n=9 Tax=Caenorhabditis TaxID=6237 RepID=E3LUF3_CAERE)

HSP 1 Score: 89.7 bits (221), Expect = 2.710e-19
Identity = 42/64 (65.62%), Postives = 50/64 (78.12%), Query Frame = 1 
Query:    1 YTATESTNYYFDVKASELEGATDRFAQFFQTPLFADSSVERELQAVDSEHSNNKNDDSWRLYQV 192
            YTAT+ TNY+FDVK  +L GA DRF QFF +P F +S+ ERE+ AVDSEHSNN N+DSWR  QV
Sbjct:  200 YTATDHTNYHFDVKPEQLSGALDRFVQFFLSPQFTESATEREVCAVDSEHSNNLNNDSWRFLQV 263
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74244.17583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM01_ECTSI6.860e-2982.81Similar to insulin-degrading enzyme n=2 Tax=Ectoca... [more]
A0A367J2K5_RHIAZ2.640e-2065.63Insulinase (Peptidase M16) (Fragment) n=1 Tax=Rhiz... [more]
A0A367K156_RHIAZ4.770e-2065.63Insulinase (Peptidase M16) (Fragment) n=1 Tax=Rhiz... [more]
A0A2G4T949_RHIZD5.710e-2065.63A-pheromone processing metallopeptidase Ste23 n=4 ... [more]
A0A507BNK7_9FUNG7.780e-2065.63Uncharacterized protein n=1 Tax=Synchytrium microb... [more]
A0A8H7BRR7_9FUNG1.450e-1964.06Insulinase (Peptidase M16) n=1 Tax=Apophysomyces o... [more]
A0A6U3RP04_9STRA2.710e-1967.19Hypothetical protein n=5 Tax=Ditylum brightwellii ... [more]
A8X9D3_CAEBR2.710e-1965.63Protein CBG09322 n=3 Tax=Caenorhabditis TaxID=6237... [more]
A0A260ZZH2_9PELO2.710e-1965.63Uncharacterized protein (Fragment) n=1 Tax=Caenorh... [more]
E3LUF3_CAERE2.710e-1965.63Uncharacterized protein n=9 Tax=Caenorhabditis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74244contigM-pyrifera_M_contig74244:647..859 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score118.2
Seed ortholog evalue1.5e-24
Seed eggNOG ortholog2880.D8LM01
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the peptidase M16 family
EggNOG OGsCOG1025@1,KOG0959@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size213
Cds size213
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816640.9343207-CDS-M-pyrifera_M_contig74244:646..8591622816640.9343207-CDS-M-pyrifera_M_contig74244:646..859Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74244 647..859 +
1692278093.5109196-CDS-M-pyrifera_M_contig74244:646..8591692278093.5109196-CDS-M-pyrifera_M_contig74244:646..859Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74244 647..859 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74244.17583.1prot_M-pyrifera_M_contig74244.17583.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74244 647..859 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74244.17583.1

>prot_M-pyrifera_M_contig74244.17583.1 ID=prot_M-pyrifera_M_contig74244.17583.1|Name=mRNA_M-pyrifera_M_contig74244.17583.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=71bp
YTATESTNYYFDVKASELEGATDRFAQFFQTPLFADSSVERELQAVDSEH
SNNKNDDSWRLYQVGGQGIG*
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mRNA from alignment at M-pyrifera_M_contig74244:647..859+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74244.17583.1 ID=mRNA_M-pyrifera_M_contig74244.17583.1|Name=mRNA_M-pyrifera_M_contig74244.17583.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=213bp|location=Sequence derived from alignment at M-pyrifera_M_contig74244:647..859+ (Macrocystis pyrifera P11B4 male)
TACACTGCGACCGAGTCGACGAACTACTACTTCGACGTGAAGGCCTCCGA
GCTGGAAGGCGCGACCGACCGTTTCGCACAATTCTTTCAGACGCCGCTCT
TTGCGGACTCGTCGGTAGAGCGAGAGCTCCAGGCGGTGGACTCCGAGCAC
AGCAACAACAAGAACGATGACTCTTGGAGGCTTTACCAGGTGGGTGGGCA
GGGAATTGGATGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74244:647..859+

>mRNA_M-pyrifera_M_contig74244.17583.1 ID=mRNA_M-pyrifera_M_contig74244.17583.1|Name=mRNA_M-pyrifera_M_contig74244.17583.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=426bp|location=Sequence derived from alignment at M-pyrifera_M_contig74244:647..859+ (Macrocystis pyrifera P11B4 male)
TACACTGCGACCGAGTCGACGAACTACTACTTCGACGTGAAGGCCTCCGA
GCTGGAAGGCGCGACCGACCGTTTCGCACAATTCTTTCAGACGCCGCTCT
TTGCGGACTCGTCGGTAGAGCGAGAGCTCCAGGCGGTGGACTCCGAGCAC
AGCAACAACAAGAACGATGACTCTTGGAGGCTTTACCAGGTGGGTGGGCA
GGGAATTGGATGATACACTGCGACCGAGTCGACGAACTACTACTTCGACG
TGAAGGCCTCCGAGCTGGAAGGCGCGACCGACCGTTTCGCACAATTCTTT
CAGACGCCGCTCTTTGCGGACTCGTCGGTAGAGCGAGAGCTCCAGGCGGT
GGACTCCGAGCACAGCAACAACAAGAACGATGACTCTTGGAGGCTTTACC
AGGTGGGTGGGCAGGGAATTGGATGA
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