mRNA_M-pyrifera_M_contig74211.17577.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig74211.17577.1 vs. uniprot
Match: A0A517WFV3_9PLAN (Uncharacterized protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WFV3_9PLAN) HSP 1 Score: 177 bits (448), Expect = 1.610e-53 Identity = 86/88 (97.73%), Postives = 86/88 (97.73%), Query Frame = 1 Query: 1 MGRYGKLFLVGVLIVAGGCMPGVHVKKNPADKDKGIRYYRPKPYLFIYPAGSETTTYNEGKKEKMVAEKSDEFVNIELQYLPDFSEEY 264 MGRYGKLFLVGVLIVAGGCMPGV VKKNPAD DKGIRYYRPKPYLFIYPAGSETTTYNEGKKEKMVAEKSDEFVNIELQYLPDFSEEY Sbjct: 1 MGRYGKLFLVGVLIVAGGCMPGVRVKKNPADNDKGIRYYRPKPYLFIYPAGSETTTYNEGKKEKMVAEKSDEFVNIELQYLPDFSEEY 88
BLAST of mRNA_M-pyrifera_M_contig74211.17577.1 vs. uniprot
Match: UPI00118B1D4A (hypothetical protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=UPI00118B1D4A) HSP 1 Score: 170 bits (430), Expect = 8.570e-51 Identity = 83/89 (93.26%), Postives = 87/89 (97.75%), Query Frame = 1 Query: 1 MGRYGKLFLVGVLIVAGGCMPGVHVKKNPADKDKGIRYYRPKPYLFIYPAGSETTTYN-EGKKEKMVAEKSDEFVNIELQYLPDFSEEY 264 MGRYGKLFLVGVLIVAGGCMPGVHVKKNPADKDKGIRYYRPKPYLFIYPAG ETTTYN EGK+++MVA+KSDEFVNIELQYLPDFSEEY Sbjct: 1 MGRYGKLFLVGVLIVAGGCMPGVHVKKNPADKDKGIRYYRPKPYLFIYPAGRETTTYNKEGKEQQMVADKSDEFVNIELQYLPDFSEEY 89
BLAST of mRNA_M-pyrifera_M_contig74211.17577.1 vs. uniprot
Match: A0A6I6ALN2_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A6I6ALN2_9PLAN) HSP 1 Score: 160 bits (406), Expect = 3.530e-47 Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 1 Query: 1 MGRYGKLFLVGVLIVAGGCMPGVHVKKNPADKDKGIRYYRPKPYLFIYPAGSETTTYNE-GKKEKMVAEKSDEFVNIELQYLPDFSEEY 264 MGRYGKLFLVGVLIVAGGCMPGVHVKKNPADKDKGIRYYRPKPYLFIYPAG ETT+Y + G K+ VA+KSDEFVNIELQYLPDFSEEY Sbjct: 1 MGRYGKLFLVGVLIVAGGCMPGVHVKKNPADKDKGIRYYRPKPYLFIYPAGRETTSYTDKGVKKSTVADKSDEFVNIELQYLPDFSEEY 89
BLAST of mRNA_M-pyrifera_M_contig74211.17577.1 vs. uniprot
Match: A0A517WQ21_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WQ21_9PLAN) HSP 1 Score: 93.6 bits (231), Expect = 8.490e-21 Identity = 45/83 (54.22%), Postives = 57/83 (68.67%), Query Frame = 1 Query: 16 KLFLVGVLIVAGGCMPGVHVKKNPADKDKGIRYYRPKPYLFIYPAGSETTTYNEGKKEKMVAEKSDEFVNIELQYLPDFSEEY 264 + ++G++I+ GCMPGV VKKNP D+D GIRYYRPKPYL I P+ S T G + SD+FV ++L YLPDFSEEY Sbjct: 7 NILILGLIILTSGCMPGVKVKKNPTDRDTGIRYYRPKPYLLITPS-SVKKTLGTGPTQTSETSPSDQFVEMKLDYLPDFSEEY 88
BLAST of mRNA_M-pyrifera_M_contig74211.17577.1 vs. uniprot
Match: A0A7V5Q0J6_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7V5Q0J6_9PLAN) HSP 1 Score: 69.3 bits (168), Expect = 5.160e-13 Identity = 40/80 (50.00%), Postives = 46/80 (57.50%), Query Frame = 1 Query: 25 LVGVLIVAGGCMPGVHVKKNPADKDKGIRYYRPKPYLFIYPAGSETTTYNEGKKEKMVAEKSDEFVNIELQYLPDFSEEY 264 L+ +L+ GC+P V NP +DKGIRYYRPKPYL + PA E VA V IELQYLPDFSEEY Sbjct: 11 LLPILLTTTGCLPRTTVVANPGPRDKGIRYYRPKPYLLVQPA------------EGPVAGGQ---VTIELQYLPDFSEEY 75
BLAST of mRNA_M-pyrifera_M_contig74211.17577.1 vs. uniprot
Match: A0A5C6BFA2_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly21 TaxID=2528014 RepID=A0A5C6BFA2_9BACT) HSP 1 Score: 68.6 bits (166), Expect = 1.180e-11 Identity = 42/82 (51.22%), Postives = 47/82 (57.32%), Query Frame = 1 Query: 19 LFLVGVLIVAGGCMPGVHVKKNPADKDKGIRYYRPKPYLFIYPAGSETTTYNEGKKEKMVAEKSDEFVNIELQYLPDFSEEY 264 L L L+ GC P V V+KNP D D+GIRYYRPKPYL I PA + K E +A V I L YLPDFSEEY Sbjct: 13 LLLSAFLVSIAGCTPKVIVRKNPDDCDRGIRYYRPKPYLKIEPAEIAIS-----KTETSIAPG---MVRISLVYLPDFSEEY 86
BLAST of mRNA_M-pyrifera_M_contig74211.17577.1 vs. uniprot
Match: A0A3L7PJ00_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7PJ00_9BACT) HSP 1 Score: 67.8 bits (164), Expect = 1.620e-11 Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 1 Query: 19 LFLVGVLIVAGGCMPGVHVKKNPADKDKGIRYYRPKPYLFIYPAGSETTTYNEGKKEKMVAEKSDEFVNIELQYLPDFSEEY 264 L L V ++A GC+P V++NP DKGIRYYRPKPYL + P + T E S V I+L Y+PDFSEEY Sbjct: 7 LVLAVVALIACGCVPRTFVRRNPLPTDKGIRYYRPKPYLKVAPFVNAVT-----------GEASTTQVAIDLAYMPDFSEEY 77
BLAST of mRNA_M-pyrifera_M_contig74211.17577.1 vs. uniprot
Match: A0A255RCV9_9BACT (Uncharacterized protein n=2 Tax=Rhodopirellula sp. MGV TaxID=2023130 RepID=A0A255RCV9_9BACT) HSP 1 Score: 66.6 bits (161), Expect = 2.640e-11 Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = 1 Query: 25 LVGVLIVAGGCMPGVHVKKNPADKDKGIRYYRPKPYLFIYPAGSETTTYNEGKKEKMVAEKSDEFVNIELQYLPDFSEEY 264 L+ + +++ GC+P V KNP D+DKG+RYYRPKP+L + P ++ E D +V IE LPD+SEEY Sbjct: 2 LIALCLLSTGCLPSTRVIKNPGDRDKGVRYYRPKPFLKLAPMTNKA------------GEPVDGYVTIEQTVLPDYSEEY 69
BLAST of mRNA_M-pyrifera_M_contig74211.17577.1 vs. uniprot
Match: A0A1G3AAY2_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium RBG_16_64_10 TaxID=1801970 RepID=A0A1G3AAY2_9BACT) HSP 1 Score: 65.5 bits (158), Expect = 1.390e-10 Identity = 36/64 (56.25%), Postives = 37/64 (57.81%), Query Frame = 1 Query: 73 VKKNPADKDKGIRYYRPKPYLFIYPAGSETTTYNEGKKEKMVAEKSDEFVNIELQYLPDFSEEY 264 V KNP D D+GIRYYRPKPYL I P SDEFV I LQYLPDFSEEY Sbjct: 15 VTKNPDDCDRGIRYYRPKPYLLIQPTDHH----------------SDEFVTITLQYLPDFSEEY 62
BLAST of mRNA_M-pyrifera_M_contig74211.17577.1 vs. uniprot
Match: A0A5C5ZLM9_9BACT (Uncharacterized protein n=1 Tax=Rhodopirellula pilleata TaxID=2714738 RepID=A0A5C5ZLM9_9BACT) HSP 1 Score: 65.1 bits (157), Expect = 2.160e-10 Identity = 36/75 (48.00%), Postives = 44/75 (58.67%), Query Frame = 1 Query: 40 IVAGGCMPGVHVKKNPADKDKGIRYYRPKPYLFIYPAGSETTTYNEGKKEKMVAEKSDEFVNIELQYLPDFSEEY 264 +V GC P V V+K+P D+D+G+RYYRPKPYL I PA E K + V I L Y+PDFSEEY Sbjct: 27 LVLPGCTPKVIVRKSPTDQDRGVRYYRPKPYLKIEPA--------EVAVNKTQSSLVPGLVRISLVYMPDFSEEY 93 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74211.17577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig74211.17577.1 >prot_M-pyrifera_M_contig74211.17577.1 ID=prot_M-pyrifera_M_contig74211.17577.1|Name=mRNA_M-pyrifera_M_contig74211.17577.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=88bp MGRYGKLFLVGVLIVAGGCMPGVHVKKNPADKDKGIRYYRPKPYLFIYPAback to top mRNA from alignment at M-pyrifera_M_contig74211:818..1081+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig74211.17577.1 ID=mRNA_M-pyrifera_M_contig74211.17577.1|Name=mRNA_M-pyrifera_M_contig74211.17577.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=264bp|location=Sequence derived from alignment at M-pyrifera_M_contig74211:818..1081+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig74211:818..1081+ >mRNA_M-pyrifera_M_contig74211.17577.1 ID=mRNA_M-pyrifera_M_contig74211.17577.1|Name=mRNA_M-pyrifera_M_contig74211.17577.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig74211:818..1081+ (Macrocystis pyrifera P11B4 male)back to top |