mRNA_M-pyrifera_M_contig74203.17570.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74203.17570.1
Unique NamemRNA_M-pyrifera_M_contig74203.17570.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig74203.17570.1 vs. uniprot
Match: A0A7S0JND9_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JND9_CAFRO)

HSP 1 Score: 117 bits (293), Expect = 3.810e-30
Identity = 60/145 (41.38%), Postives = 94/145 (64.83%), Query Frame = 1
Query:    1 GLISSSRTRATEELW--RRRAEAAERSGSTVDVAELPLPEVGEKFVSDSATSVQLPFGSEPHVRDQYVNFEGRCRYGKVMEDMDALAASVAFTHCDNGRSDTRPLSIVTAAVDRVDVQRAIPVDRDVSLRGFVSWVGRSSLEVTV 429
            G +  SRT  T++LW  RR+ + + R  +      LP      K  S S+  ++LP GS+P +RDQY+++ G  R G+++ED DA A +VAF HCD+  S T P  +VTA++DR+D++R +PV+ D+++ G V+W GRSSL V++
Sbjct:   43 GQVIRSRTGVTQQLWEMRRKLDNSRRDATRFPEGNLP------KAPSASSLCIELPLGSDPELRDQYLSWRGSVRLGRLLEDADAFAGTVAFLHCDDALSHTAPQRLVTASIDRIDMRRPVPVE-DLAMCGNVTWAGRSSLRVSM 180          
BLAST of mRNA_M-pyrifera_M_contig74203.17570.1 vs. uniprot
Match: A0A0L0HL10_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HL10_SPIPD)

HSP 1 Score: 120 bits (302), Expect = 2.420e-29
Identity = 63/145 (43.45%), Postives = 92/145 (63.45%), Query Frame = 1
Query:   19 RTRATEELWRRRAEAAERSGSTVDVAE-----LPLPEVGEKFVSDSATSVQLPFGSEPHVRDQYVNFEGRCRYGKVMEDMDALAASVAFTHCDNGRSDTRPLSIVTAAVDRVDVQRAIPVDRDVSLRGFVSWVGRSSLEVTVRVE 438
            RT AT  +W  R  A ++  +    AE       +P + EK + DS     L F +EP V+++Y+N  G  R GK++ED+DALA S+ + HCD+GRS+T PL+IVTA++DR+D+   IP D D+ + G V+WVG SS+EV+  VE
Sbjct:   76 RTSATHRMWINRFLAEKQQQALEKRAESGESQTDIPVILEKKMKDSYIEEYLLFKTEPDVKEEYLNVYGGIRIGKILEDLDALAGSIGYLHCDDGRSETIPLTIVTASLDRIDMLDVIPPDEDIRISGHVTWVGTSSMEVSCWVE 220          
BLAST of mRNA_M-pyrifera_M_contig74203.17570.1 vs. uniprot
Match: A0A507E2D7_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E2D7_9FUNG)

HSP 1 Score: 119 bits (299), Expect = 4.880e-29
Identity = 65/149 (43.62%), Postives = 96/149 (64.43%), Query Frame = 1
Query:   19 RTRATEELWRRR--AEAAERSGSTVDVAEL-----PLPE--VGEKFVSDSATSVQLPFGSEPHVRDQYVNFEGRCRYGKVMEDMDALAASVAFTHCDNGRSDTRPLSIVTAAVDRVDVQRAIPVDRDVSLRGFVSWVGRSSLEVTVRVE 438
            RT AT  +W  R  AE  +++  T   AE      P P   + +K + DS     L F +EP VR++Y++  G  R GK++ED+DALA S+A+ HCD+ RS+T PL+IVTA++DR+D+ + IP D+D+ + G V+WVG SS+EV+  VE
Sbjct:   47 RTSATHRMWINRFLAEKQQQAIQTTAKAESDGSVHPAPPRIILDKKMKDSYIEEYLLFKTEPDVREEYISAHGSVRIGKILEDLDALAGSIAYFHCDDNRSETIPLTIVTASLDRIDLLQPIPTDQDIRMSGHVTWVGNSSMEVSCWVE 195          
BLAST of mRNA_M-pyrifera_M_contig74203.17570.1 vs. uniprot
Match: A0A0L0SAQ6_ALLM3 (Uncharacterized protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SAQ6_ALLM3)

HSP 1 Score: 117 bits (294), Expect = 3.120e-28
Identity = 57/121 (47.11%), Postives = 82/121 (67.77%), Query Frame = 1
Query:   76 GSTVDVAELPLPEVGEKFVSDSATSVQLPFGSEPHVRDQYVNFEGRCRYGKVMEDMDALAASVAFTHCDNGRSDTRPLSIVTAAVDRVDVQRAIPVDRDVSLRGFVSWVGRSSLEVTVRVE 438
            G T  VA      +  K + DS     LPF S PHV+++Y N+ G  R  K++ED+DALA S+++THCD+G  +T PL+IVTA+VDR+D+ R   +DRD+ + G V++VG SS+E+TV VE
Sbjct:  112 GDTAAVAASAPRHLVLKRMKDSYIREVLPFRSNPHVKEEYCNYWGGLRIAKLLEDLDALAGSISYTHCDDGTPETPPLTIVTASVDRLDLLRPASLDRDMQVSGMVTYVGSSSMEITVNVE 232          
BLAST of mRNA_M-pyrifera_M_contig74203.17570.1 vs. uniprot
Match: A0A1Y2HSL5_9FUNG (HotDog domain-containing protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HSL5_9FUNG)

HSP 1 Score: 116 bits (290), Expect = 8.560e-28
Identity = 50/105 (47.62%), Postives = 77/105 (73.33%), Query Frame = 1
Query:  124 KFVSDSATSVQLPFGSEPHVRDQYVNFEGRCRYGKVMEDMDALAASVAFTHCDNGRSDTRPLSIVTAAVDRVDVQRAIPVDRDVSLRGFVSWVGRSSLEVTVRVE 438
            K + DS    +LPF S PHVR++YVNF G  R  K++ED+DA+A S+++THCD+   +T PL+IVTA+VDR+D+ +   +++D  + G V++VG SS+E+T+ VE
Sbjct:  102 KHMKDSYIEGELPFKSNPHVREEYVNFYGSIRIAKLLEDLDAMAGSISYTHCDDNTPETPPLTIVTASVDRIDLLKRPSLEQDTKVSGMVTYVGHSSMEITITVE 206          
BLAST of mRNA_M-pyrifera_M_contig74203.17570.1 vs. uniprot
Match: L8HGT5_ACACA (AcylCoA thioester hydrolase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HGT5_ACACA)

HSP 1 Score: 113 bits (282), Expect = 4.930e-27
Identity = 53/106 (50.00%), Postives = 75/106 (70.75%), Query Frame = 1
Query:  121 EKFVSDSATSVQLPFGSEPHVRDQYVNFEGRCRYGKVMEDMDALAASVAFTHCDNGRSDTRPLSIVTAAVDRVDVQRAIPVDRDVSLRGFVSWVGRSSLEVTVRVE 438
            +K   DSA  V LPF ++  +R+QY+NF G  R GK++ED+DA A +VA  H D+    TRPL+IVTA+VDR+D+   +  DRD+ + GFV++VGRSS+E+ V VE
Sbjct:   33 DKTPCDSAIEVVLPFSTDLALREQYINFYGNLRMGKILEDLDACAGNVAHAHADDSNPKTRPLTIVTASVDRIDLLDKLLPDRDMRMTGFVTYVGRSSMEIRVEVE 138          
BLAST of mRNA_M-pyrifera_M_contig74203.17570.1 vs. uniprot
Match: A0A1Y2CS03_9FUNG (Thioesterase/thiol ester dehydrase-isomerase n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CS03_9FUNG)

HSP 1 Score: 113 bits (283), Expect = 5.640e-27
Identity = 60/138 (43.48%), Postives = 93/138 (67.39%), Query Frame = 1
Query:   25 RATEELWRRRAEAAERSGSTVDVAELPLPEVGEKFVSDSATSVQLPFGSEPHVRDQYVNFEGRCRYGKVMEDMDALAASVAFTHCDNGRSDTRPLSIVTAAVDRVDVQRAIPVDRDVSLRGFVSWVGRSSLEVTVRVE 438
            R T++L + RA+ ++ +GS    +       G+K  SDS     LPF S+P +R++YVN  GR R GKV+ED+DALAA  A+ HC       RPL+IVTA+VDR+D+   +P++ D+S+  +V++VG+SS+EVT+++E
Sbjct:   45 RMTDQLNQLRAQTSKITGSPSSPSTSAALSGGKKM-SDSFVQAFLPFRSDPSLREEYVNSHGRIRVGKVLEDLDALAACSAYLHCSGS---ARPLTIVTASVDRIDMLHEVPLNEDISVFAYVTYVGKSSMEVTLQME 178          
BLAST of mRNA_M-pyrifera_M_contig74203.17570.1 vs. uniprot
Match: A0A4P9XDA1_9FUNG (Uncharacterized protein n=2 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9XDA1_9FUNG)

HSP 1 Score: 112 bits (279), Expect = 2.870e-26
Identity = 50/109 (45.87%), Postives = 78/109 (71.56%), Query Frame = 1
Query:  112 EVGEKFVSDSATSVQLPFGSEPHVRDQYVNFEGRCRYGKVMEDMDALAASVAFTHCDNGRSDTRPLSIVTAAVDRVDVQRAIPVDRDVSLRGFVSWVGRSSLEVTVRVE 438
            +V EK + DS     +PF SEP +++ YVN  GR R GK++ED+DAL+ S+A+ HCD+  ++T P  IVTA++DR+D+ + IP D DV + G V++VG SS+E+++ +E
Sbjct:   31 QVLEKRMRDSYVEEIIPFRSEPVIKEDYVNVFGRIRMGKILEDLDALSGSIAYLHCDDNMTNTSPFKIVTASLDRLDLLQDIPPDEDVRMSGMVTYVGTSSMEISIMME 139          
BLAST of mRNA_M-pyrifera_M_contig74203.17570.1 vs. uniprot
Match: A0A0G4H7X4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H7X4_9ALVE)

HSP 1 Score: 112 bits (281), Expect = 3.470e-26
Identity = 60/146 (41.10%), Postives = 91/146 (62.33%), Query Frame = 1
Query:    1 GLISSSRTRATEELWRRRAEAA---ERSGSTVDVAELPLPEVGEKFVSDSATSVQLPFGSEPHVRDQYVNFEGRCRYGKVMEDMDALAASVAFTHCDNGRSDTRPLSIVTAAVDRVDVQRAIPVDRDVSLRGFVSWVGRSSLEVTV 429
            G +  +RT  T +LW++R + A   +  G   ++A+     +G +    S T + +P  S+  +R QY NF G  R+GK++EDMDAL+ ++AF H    R     L +VTAAVDRVD+  A+P+DRD+S+RG++SW G SS+EV V
Sbjct:  158 GALPPNRTSITSQLWQQRQQKALEMKERGEGENIADEEY--LGPRSPKQSETCIDVPLQSDDIIRVQYCNFRGGVRFGKILEDMDALSGTIAFLHTQPKR-----LGLVTAAVDRVDLLHAVPLDRDLSMRGYLSWTGSSSMEVRV 296          
BLAST of mRNA_M-pyrifera_M_contig74203.17570.1 vs. uniprot
Match: R4XGB4_TAPDE (Putative Acyl-CoA thioester hydrolase n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4XGB4_TAPDE)

HSP 1 Score: 110 bits (276), Expect = 4.460e-26
Identity = 51/105 (48.57%), Postives = 76/105 (72.38%), Query Frame = 1
Query:  124 KFVSDSATSVQLPFGSEPHVRDQYVNFEGRCRYGKVMEDMDALAASVAFTHCDNGRSDTRPLSIVTAAVDRVDVQRAIPVDRDVSLRGFVSWVGRSSLEVTVRVE 438
            K + DS     LPF ++P VR+ Y+N  G  R GK++ED+DAL+ ++A+ HCD+    T PL+IVTA+VDR+D+  ++ +DRD+ L G V++VG SS+E+TVRVE
Sbjct:   29 KRMKDSYVEGYLPFTTDPVVREDYINAFGGIRLGKLLEDLDALSGAIAYKHCDDLNHRTLPLAIVTASVDRIDLLNSLEIDRDMRLSGHVTYVGSSSMEITVRVE 133          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74203.17570.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0JND9_CAFRO3.810e-3041.38Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A0L0HL10_SPIPD2.420e-2943.45Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A507E2D7_9FUNG4.880e-2943.62Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
A0A0L0SAQ6_ALLM33.120e-2847.11Uncharacterized protein n=2 Tax=Allomyces macrogyn... [more]
A0A1Y2HSL5_9FUNG8.560e-2847.62HotDog domain-containing protein n=1 Tax=Catenaria... [more]
L8HGT5_ACACA4.930e-2750.00AcylCoA thioester hydrolase n=1 Tax=Acanthamoeba c... [more]
A0A1Y2CS03_9FUNG5.640e-2743.48Thioesterase/thiol ester dehydrase-isomerase n=1 T... [more]
A0A4P9XDA1_9FUNG2.870e-2645.87Uncharacterized protein n=2 Tax=Caulochytrium prot... [more]
A0A0G4H7X4_9ALVE3.470e-2641.10Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
R4XGB4_TAPDE4.460e-2648.57Putative Acyl-CoA thioester hydrolase n=1 Tax=Taph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74203contigM-pyrifera_M_contig74203:3..440 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score121.7
Seed ortholog evalue2.8e-25
Seed eggNOG ortholog109760.SPPG_03603T0
KEGG koko:K17361
Hectar predicted targeting categoryother localisation
EggNOG free text desc.acyl-CoA thioester hydrolase
EggNOG OGs38EDX@33154,3NUK0@4751,COG1607@1,KOG2763@2759
COG Functional cat.I
Best tax levelFungi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01004
Exons1
Model size438
Cds size438
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816640.448698-CDS-M-pyrifera_M_contig74203:2..4401622816640.448698-CDS-M-pyrifera_M_contig74203:2..440Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74203 3..440 -
1692278093.3035424-CDS-M-pyrifera_M_contig74203:2..4401692278093.3035424-CDS-M-pyrifera_M_contig74203:2..440Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74203 3..440 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74203.17570.1prot_M-pyrifera_M_contig74203.17570.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74203 3..440 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74203.17570.1

>prot_M-pyrifera_M_contig74203.17570.1 ID=prot_M-pyrifera_M_contig74203.17570.1|Name=mRNA_M-pyrifera_M_contig74203.17570.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp
GLISSSRTRATEELWRRRAEAAERSGSTVDVAELPLPEVGEKFVSDSATS
VQLPFGSEPHVRDQYVNFEGRCRYGKVMEDMDALAASVAFTHCDNGRSDT
RPLSIVTAAVDRVDVQRAIPVDRDVSLRGFVSWVGRSSLEVTVRVE
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mRNA from alignment at M-pyrifera_M_contig74203:3..440-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74203.17570.1 ID=mRNA_M-pyrifera_M_contig74203.17570.1|Name=mRNA_M-pyrifera_M_contig74203.17570.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig74203:3..440- (Macrocystis pyrifera P11B4 male)
GGCTTGATTTCGTCATCGCGCACCCGCGCCACGGAGGAGCTGTGGCGGCG TCGGGCAGAGGCGGCGGAGAGGTCGGGGTCCACAGTAGATGTGGCGGAGC TGCCGCTGCCGGAGGTGGGCGAGAAGTTCGTGTCGGACAGCGCGACGAGC GTGCAGCTGCCGTTCGGCAGCGAGCCGCATGTTCGCGACCAGTACGTGAA CTTTGAAGGGCGGTGCCGATACGGCAAGGTGATGGAAGACATGGATGCGT TGGCAGCGTCCGTGGCGTTCACGCACTGCGACAATGGGCGGAGCGACACG CGGCCGCTGTCCATCGTGACGGCGGCAGTGGATCGGGTGGATGTGCAGCG CGCCATCCCAGTGGACCGCGACGTGAGCCTTCGCGGGTTCGTCTCCTGGG TGGGCCGCTCCTCACTGGAGGTGACGGTGCGCGTGGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74203:3..440-

>mRNA_M-pyrifera_M_contig74203.17570.1 ID=mRNA_M-pyrifera_M_contig74203.17570.1|Name=mRNA_M-pyrifera_M_contig74203.17570.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig74203:3..440- (Macrocystis pyrifera P11B4 male)
GGCTTGATTTCGTCATCGCGCACCCGCGCCACGGAGGAGCTGTGGCGGCG
TCGGGCAGAGGCGGCGGAGAGGTCGGGGTCCACAGTAGATGTGGCGGAGC
TGCCGCTGCCGGAGGTGGGCGAGAAGTTCGTGTCGGACAGCGCGACGAGC
GTGCAGCTGCCGTTCGGCAGCGAGCCGCATGTTCGCGACCAGTACGTGAA
CTTTGAAGGGCGGTGCCGATACGGCAAGGTGATGGAAGACATGGATGCGT
TGGCAGCGTCCGTGGCGTTCACGCACTGCGACAATGGGCGGAGCGACACG
CGGCCGCTGTCCATCGTGACGGCGGCAGTGGATCGGGTGGATGTGCAGCG
CGCCATCCCAGTGGACCGCGACGTGAGCCTTCGCGGGTTCGTCTCCTGGG
TGGGCCGCTCCTCACTGGAGGTGACGGTGCGCGTGGAGGGCTTGATTTCG
TCATCGCGCACCCGCGCCACGGAGGAGCTGTGGCGGCGTCGGGCAGAGGC
GGCGGAGAGGTCGGGGTCCACAGTAGATGTGGCGGAGCTGCCGCTGCCGG
AGGTGGGCGAGAAGTTCGTGTCGGACAGCGCGACGAGCGTGCAGCTGCCG
TTCGGCAGCGAGCCGCATGTTCGCGACCAGTACGTGAACTTTGAAGGGCG
GTGCCGATACGGCAAGGTGATGGAAGACATGGATGCGTTGGCAGCGTCCG
TGGCGTTCACGCACTGCGACAATGGGCGGAGCGACACGCGGCCGCTGTCC
ATCGTGACGGCGGCAGTGGATCGGGTGGATGTGCAGCGCGCCATCCCAGT
GGACCGCGACGTGAGCCTTCGCGGGTTCGTCTCCTGGGTGGGCCGCTCCT
CACTGGAGGTGACGGTGCGCGTGGAG
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