mRNA_M-pyrifera_M_contig74188.17567.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig74188.17567.1 vs. uniprot
Match: D8LQ70_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ70_ECTSI) HSP 1 Score: 239 bits (609), Expect = 1.880e-72 Identity = 119/140 (85.00%), Postives = 129/140 (92.14%), Query Frame = 1 Query: 1 LSFPPALPV-MVASRMLGDEIGTIHSRKELNELLKIHVKHGAIDVETGREVAGAMNYKKRVVRDAMTPVKDCFMLSVSEKLNFKTLSVIFKSGFSRIPVFAKDYNDVIGLLFTKDLIFIDPDDETPLKNFVQIFGRAVTV 417 L +P P+ ++ ++LGDEIGTIHSRKEL+ELLKIHV+HGAIDVETGREVAGAMNYK+ VR+ MTPVKDCFMLSVSEKLNFKTLSVIFKSGFSRIPVFAKD NDVIGLLFTKDLIFIDPDDETPLKNFVQIFGRAVTV Sbjct: 156 LLYPVTKPLSLMLDKLLGDEIGTIHSRKELSELLKIHVEHGAIDVETGREVAGAMNYKEHTVREVMTPVKDCFMLSVSEKLNFKTLSVIFKSGFSRIPVFAKDRNDVIGLLFTKDLIFIDPDDETPLKNFVQIFGRAVTV 295
BLAST of mRNA_M-pyrifera_M_contig74188.17567.1 vs. uniprot
Match: A0A836CN78_9STRA (Putative magnesium and cobalt efflux protein corC n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN78_9STRA) HSP 1 Score: 185 bits (469), Expect = 2.000e-54 Identity = 88/140 (62.86%), Postives = 113/140 (80.71%), Query Frame = 1 Query: 1 LSFPPALPV-MVASRMLGDEIGTIHSRKELNELLKIHVKHGAIDVETGREVAGAMNYKKRVVRDAMTPVKDCFMLSVSEKLNFKTLSVIFKSGFSRIPVFAKDYNDVIGLLFTKDLIFIDPDDETPLKNFVQIFGRAVTV 417 L +P P+ V RMLG+E+GTIHSR EL ELL++HVK+GA+DVETGRE+ GA++YK VR AMTP+ +MLS ++LNFKT+S IF++GFSRIPV+ +D++GL+FTKDLIFIDP+DETP+KNFVQIFGR V V Sbjct: 120 LLWPVCKPLSFVLDRMLGEEVGTIHSRMELRELLQLHVKYGALDVETGREIEGALHYKDIEVRAAMTPISKVYMLSAEDRLNFKTVSEIFRTGFSRIPVYGAGRDDIVGLVFTKDLIFIDPEDETPVKNFVQIFGRGVQV 259
BLAST of mRNA_M-pyrifera_M_contig74188.17567.1 vs. uniprot
Match: A0A835YX11_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX11_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.470e-48 Identity = 82/138 (59.42%), Postives = 105/138 (76.09%), Query Frame = 1 Query: 1 LSFPPALPV-MVASRMLGDEIGTIHSRKELNELLKIHVKHGAIDVETGREVAGAMNYKKRVVRDAMTPVKDCFMLSVSEKLNFKTLSVIFKSGFSRIPVFAKDYNDVIGLLFTKDLIFIDPDDETPLKNFVQIFGRAV 411 L +P P+ + + LG+E+GTIH+R EL ELL IHVKHGAIDVETGRE+AGA+ YK +VR MTP + FMLS +L+++T+ IF +GFSRIPV +D++GLLFTKDLIFIDP D TP+KNF+Q+FGRAV Sbjct: 105 LFYPICKPLAFILDKCLGEEVGTIHTRTELRELLNIHVKHGAIDVETGREMAGALKYKDLLVRAVMTPKEKVFMLSADARLDYRTVRAIFGTGFSRIPVHGASTDDIVGLLFTKDLIFIDPVDATPVKNFIQVFGRAV 242
BLAST of mRNA_M-pyrifera_M_contig74188.17567.1 vs. uniprot
Match: A0A7S4D856_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D856_HETAK) HSP 1 Score: 166 bits (421), Expect = 3.450e-46 Identity = 76/130 (58.46%), Postives = 102/130 (78.46%), Query Frame = 1 Query: 28 MVASRMLGDEIGTIHSRKELNELLKIHVKHGAIDVETGREVAGAMNYKKRVVRDAMTPVKDCFMLSVSEKLNFKTLSVIFKSGFSRIPVFAKDYNDVIGLLFTKDLIFIDPDDETPLKNFVQIFGRAVTV 417 MV LGDEIGTIHSR+EL +LL+IHV+HG++D E+G V GA+ YK VV + MT ++DCFML V E L+F+T+S IF+SGFSR+PV+ NDV+G++ TKDLIFIDP+D TP+++F+ IFGR + V Sbjct: 158 MVLDWALGDEIGTIHSRRELMKLLQIHVEHGSLDAESGNVVEGALKYKDMVVEEVMTSLEDCFMLPVEEVLDFRTISSIFQSGFSRVPVYEGSPNDVVGVILTKDLIFIDPEDATPVRHFINIFGRQILV 287
BLAST of mRNA_M-pyrifera_M_contig74188.17567.1 vs. uniprot
Match: A0A835ZG32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG32_9STRA) HSP 1 Score: 167 bits (424), Expect = 5.070e-46 Identity = 88/169 (52.07%), Postives = 109/169 (64.50%), Query Frame = 1 Query: 7 FPPALPVMVA-SRMLGDEIGTIHSRKELNELLKIHVKHGAIDVETGREVAGAMNYKKRVVRDAMTP-------------------------------VKDCFMLSVSEKLNFKTLSVIFKSGFSRIPVFAKDYNDVIGLLFTKDLIFIDPDDETPLKNFVQIFGRAVTV 417 +P P+ V +MLG+E+GTIHSR EL ELL IHVKHGA+DVETGREV GA+ YK V MTP D FMLS ++LN+KT+ IF++GFSRIPVF ++D+IGL+FTKDLIF+DP+DETP+KNFVQIFGRAV + Sbjct: 195 WPITKPLAVLLDKMLGEEVGTIHSRTELRELLHIHVKHGALDVETGREVEGALKYKDTQVCTVMTPKGHTSTIGVAHVVVXXXXXXXXXXXXXXXXXXADVFMLSADDRLNYKTIRDIFRTGFSRIPVFGTSHDDIIGLVFTKDLIFVDPEDETPVKNFVQIFGRAVHI 363
BLAST of mRNA_M-pyrifera_M_contig74188.17567.1 vs. uniprot
Match: A0A7S2R3A4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3A4_9STRA) HSP 1 Score: 151 bits (381), Expect = 3.010e-44 Identity = 71/140 (50.71%), Postives = 102/140 (72.86%), Query Frame = 1 Query: 1 LSFPPALPVMVA-SRMLGDEIGTIHSRKELNELLKIHVKHGAIDVETGREVAGAMNYKKRVVRDAMTPVKDCFMLSVSEKLNFKTLSVIFKSGFSRIPVFAKDYNDVIGLLFTKDLIFIDPDDETPLKNFVQIFGRAVTV 417 L +P + P+ A ++LG E+GT +S+ E+++LL+IHVK G + ETG + GA+ Y+ V++ MT ++ FML EK +F+T++ +FK+GFSRIPV+ N++IGLLF KDLIFIDP+DETP+KNFVQIFGR V Sbjct: 12 LFWPISAPIAYALDKILGHELGTTYSKAEMSKLLEIHVKEGRFNQETGNVMTGALKYQDVTVKEVMTSLEHTFMLDADEKFSFETITKVFKTGFSRIPVYEVSMNNIIGLLFVKDLIFIDPEDETPVKNFVQIFGRGAHV 151
BLAST of mRNA_M-pyrifera_M_contig74188.17567.1 vs. uniprot
Match: A0A7S4VAQ1_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VAQ1_9STRA) HSP 1 Score: 159 bits (401), Expect = 2.090e-42 Identity = 77/138 (55.80%), Postives = 104/138 (75.36%), Query Frame = 1 Query: 7 FPPALPV-MVASRMLGDEIGTIHSRKELNELLKIHVKHGAIDVETGREVAGAMNYKKRVVRDAMTPVKDCFMLSVSEKLNFKTLSVIFKSGFSRIPVFAKDYNDVIGLLFTKDLIFIDPDDETPLKNFVQIFGRAVTV 417 FP A P+ V ++LG EIGT +S+ E+ +LL+IHVK G D ETG + GA+NY+ V + MTP+++ FML+V EKLNF+T++ IFK+G+SR+PV+ N+VIGLLF KDLIFIDP+DET ++NFVQIFGR V Sbjct: 388 FPIAGPLAFVLDKLLGHEIGTTYSKAEMRKLLEIHVKQGRFDHETGTAMKGALNYQDMTVSEVMTPLENVFMLNVDEKLNFETIAKIFKTGYSRLPVYEVSKNNVIGLLFVKDLIFIDPEDETRVRNFVQIFGRGAHV 525
BLAST of mRNA_M-pyrifera_M_contig74188.17567.1 vs. uniprot
Match: A0A7S2ICV3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2ICV3_9STRA) HSP 1 Score: 156 bits (394), Expect = 4.060e-42 Identity = 70/126 (55.56%), Postives = 98/126 (77.78%), Query Frame = 1 Query: 40 RMLGDEIGTIHSRKELNELLKIHVKHGAIDVETGREVAGAMNYKKRVVRDAMTPVKDCFMLSVSEKLNFKTLSVIFKSGFSRIPVFAKDYNDVIGLLFTKDLIFIDPDDETPLKNFVQIFGRAVTV 417 ++LG EIGT +S+ E+ +LL+IHV G D ETG + GA+NY+ V + MTP+++ FML+V EKL+F+T++ IFK+G+SR+PV+ N++IGLLF KDLIFIDP+DETP++NFVQIFGR V Sbjct: 8 KLLGHEIGTTYSKAEMRKLLEIHVNQGRFDKETGTAMKGALNYQDMTVNEVMTPLENVFMLNVDEKLSFETIATIFKTGYSRLPVYEVSRNNIIGLLFVKDLIFIDPEDETPVRNFVQIFGRGAHV 133
BLAST of mRNA_M-pyrifera_M_contig74188.17567.1 vs. uniprot
Match: A0A7S2EVA9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVA9_TRICV) HSP 1 Score: 153 bits (387), Expect = 5.780e-42 Identity = 71/138 (51.45%), Postives = 105/138 (76.09%), Query Frame = 1 Query: 7 FPPALPVM-VASRMLGDEIGTIHSRKELNELLKIHVKHGAIDVETGREVAGAMNYKKRVVRDAMTPVKDCFMLSVSEKLNFKTLSVIFKSGFSRIPVFAKDYNDVIGLLFTKDLIFIDPDDETPLKNFVQIFGRAVTV 417 +P A P+ + ++LG E+GT +S+ E+ +LL+IHVK G + ETG + GA+ Y+ +VR+ MTP+++ FMLS EKL+F+T++ IFK+G+SRIPVF N++IGLLFTKDLIF+DP+D T +++FVQIFGR + V Sbjct: 140 YPIAAPLAYMLDKVLGHELGTTYSKAEMTKLLEIHVKEGRFNQETGSAMTGALKYQDVLVREVMTPLENTFMLSADEKLSFETIATIFKTGYSRIPVFEVSVNNIIGLLFTKDLIFVDPEDNTSVRSFVQIFGRGLHV 277
BLAST of mRNA_M-pyrifera_M_contig74188.17567.1 vs. uniprot
Match: A0A7S2SUL8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUL8_9STRA) HSP 1 Score: 149 bits (375), Expect = 2.860e-39 Identity = 70/122 (57.38%), Postives = 95/122 (77.87%), Query Frame = 1 Query: 43 MLGDEIGTIHSRKELNELLKIHVKHGAIDVETGREVAGAMNYKKRVVRDAMTPVKDCFMLSVSEKLNFKTLSVIFKSGFSRIPVFA-KDYNDVIGLLFTKDLIFIDPDDETPLKNFVQIFGR 405 +LGDE+GTI+S EL +L++IH + G +D E GR + GA+ YK +V++ MTP++D +MLS KLNFKTL IF+SGFSR+PV + ++VIG+LF KDLIFIDP+DETP+KNF+QI GR Sbjct: 203 VLGDELGTIYSNTELIKLMRIHEREGQLDGEQGRALEGALRYKDMLVKEVMTPIQDVYMLSHETKLNFKTLREIFQSGFSRVPVHGPRGKDEVIGMLFVKDLIFIDPEDETPVKNFIQILGR 324 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74188.17567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig74188.17567.1 >prot_M-pyrifera_M_contig74188.17567.1 ID=prot_M-pyrifera_M_contig74188.17567.1|Name=mRNA_M-pyrifera_M_contig74188.17567.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp MVASRMLGDEIGTIHSRKELNELLKIHVKHGAIDVETGREVAGAMNYKKRback to top mRNA from alignment at M-pyrifera_M_contig74188:315..1026- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig74188.17567.1 ID=mRNA_M-pyrifera_M_contig74188.17567.1|Name=mRNA_M-pyrifera_M_contig74188.17567.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=712bp|location=Sequence derived from alignment at M-pyrifera_M_contig74188:315..1026- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig74188:315..1026- >mRNA_M-pyrifera_M_contig74188.17567.1 ID=mRNA_M-pyrifera_M_contig74188.17567.1|Name=mRNA_M-pyrifera_M_contig74188.17567.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig74188:315..1026- (Macrocystis pyrifera P11B4 male)back to top |