mRNA_M-pyrifera_M_contig7415.17560.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7415.17560.1
Unique NamemRNA_M-pyrifera_M_contig7415.17560.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig7415.17560.1 vs. uniprot
Match: D7G913_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G913_ECTSI)

HSP 1 Score: 550 bits (1417), Expect = 2.520e-182
Identity = 363/746 (48.66%), Postives = 433/746 (58.04%), Query Frame = 1
Query:    1 RLSVEGTNPMAKEFTPSSCSAPSDAPLEPMPGGPQLHMLSEKLPSK---RGFSAAVGSEVKTAAVEVRSWSTSAFIPRDAPSKA--------PESAVQAGLGDRGQNR-RHHPGEEIPGAAWPTRSTALPTRPAPLSSSRHQQMVVNQGQRSGPPGFPPLGIISERPNQVQGQAFGGSPGPLQRRDRVDHSKYQGSKLGHHTDGTWDPNKRRPPNDAGPQSVGVPHAGRSQRKNRNQGALYQVQPHGQADNRTRNSMKNAGSAGRDQFREEASGRPQRLDEDQVGSKSSSRNRIPNNQSSIRRASHDPTNSSGQDTATKVPSRRQKMCVEH-AQQSTADAHPKPTGNAVLNGSAPGLSPIRPGQEILAKAAPGRLPSPAKQDAPLAEDVLSDHGEPPFAPGGISNQPPGQW-----VSNSGERAARQAKSGEDSGGHLQPHVCKEKXXXXXXXXXXXXEEKTYRPG-SKILLGTTAKEPSRSRGGSRPSVAQRLRVLSGGIRSFFSGLIGAVLRTISWQLDRLHLVGRFLAVLSFVAASGPSLLSVLVMSMSWLFLLGLRVHSLALKEATGSIHVVVCFLFPYCFQYLVSLIGEWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALNGSELLLLSFTLAAVRLRCLFSPIFLLSWSSQASAVFAIATCGPSPSLQYGQLLVSLASLHAVSMVDVMLNSRYYHARYRAGMSLTNGFRAI 2181
            RLSVEGTNPMAKEFTPS+CS P+DA +E +P G  LH  S     +   R FSAAVGSEVKTAA E+   +      R+             P+ A Q  LGDR Q   RH PG    G  WP R+T   + P P   S+H+  +                            A GGS                                                                                   S GRD   ++  GR QR+D+ Q  S+  SRNRI   Q  +RR SH   NS  QD +TKV SRRQ+  V+H AQ S          ++     +  L P+  GQE+L   A   L S A++    AE    D GEP   P   S+  P Q      +S+S ER++RQA+  ++S  HLQ HV KEK            +++TYR   +K +LGT  KEPSR + G+RPS++Q++R++ G +RS   G++ A++RTI+WQL+RL LV R L ++SF A+S  SLLS +++S SWLFLLGLR+HSLALKE TGSIHV VCFLFPYCFQYLVS I EWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLAL GSELLLLSFTLAAVRLRC+FSPIFLLSWS Q   VFA+ATCG S SLQYGQ+LVSLASLHAVSMVDVMLNSR+YHARYRAGMSLTNGFR +
Sbjct:   96 RLSVEGTNPMAKEFTPSTCSIPADAAVE-LPTG-SLHAHSRHPAPETVNRVFSAAVGSEVKTAAAELPYRTAMQRQSRNLQGPPXXXXXXXXPQPAAQRSLGDRAQQHPRHQPG----GKPWPVRATVTHSHPGPTLPSKHRLTI----------------------------AKGGS-----------------------------------------------------------------------------------STGRDHVHDDTVGRGQRVDQVQAVSRGPSRNRI-QAQPGVRRVSHGQANSPHQDASTKVSSRRQEDFVDHTAQPSVGSRLESARDDSSQQPMSTSLFPVEQGQEMLPPQASNGLSSSAQRQGSHAERTARDDGEPSL-PATSSSGTPQQSSSSGRMSSSNERSSRQARPEDESACHLQSHVHKEKDKGKFKKK----DDRTYRAAPNKQVLGTAVKEPSRMKLGTRPSLSQKIRLMGGYLRSSSLGIVAAIVRTIAWQLNRLRLVRRMLTLVSFAASSSVSLLSAVILSTSWLFLLGLRLHSLALKEITGSIHVAVCFLFPYCFQYLVSAIDEWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALGGSELLLLSFTLAAVRLRCIFSPIFLLSWSCQ---VFALATCGSSASLQYGQVLVSLASLHAVSMVDVMLNSRFYHARYRAGMSLTNGFRTV 715          
BLAST of mRNA_M-pyrifera_M_contig7415.17560.1 vs. uniprot
Match: A0A7S2Y1S5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1S5_9STRA)

HSP 1 Score: 154 bits (388), Expect = 3.300e-37
Identity = 97/270 (35.93%), Postives = 134/270 (49.63%), Query Frame = 1
Query: 1513 HLVGRFLAVLSFVAASGPSLLSVLVMSMSWLFLLGLRVHSLALKEATGSIHVVVCFLFPYCFQYLVSLIGEWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSH-------------------------------------------LVPALRALLPVAFLCEVPSGRSYLLALNGSELLLLSFTLAAVRLRCLFSPIFLLSWSSQASAVFAIATCGPSPSLQYGQLLVSLASLHAVSMVDVMLNSRYYHARYRAGMSLTNGFRAISSSH 2193
            H+V  F+ ++ FV A   + L V+V            +H  AL+EA    H+  CF FPY F+YLV  + +WAPHW P CLWYSFL+Q+FC    +   +  S                                            L P  R LLP+  + E  SG S++L L+GSELLLLSF LAAVR+RCL SPIFL++W  +   + A++  GP P LQY QLL +L +L+ VS VD +L+       ++ G +   G  +  S H
Sbjct:   78 HVVSLFVCLVGFVLAGLFASLLVVV-----------HLHKCALREALARPHIAFCFAFPYVFRYLVGALADWAPHWAPVCLWYSFLVQLFCHRQPRNPQAPLSQQXXXXXXXXXXXXXXXXXXSPDSQLEPVNGGGDDASPPEPSVTLQPIFRLLLPLLLIAEGASGHSFVLDLDGSELLLLSFFLAAVRMRCLTSPIFLVAWPLE---ILAVSAFGPLPVLQYCQLLFALTALYGVSAVDHLLHGGGSPGGHKGGYAYAKGACSTCSVH 333          
BLAST of mRNA_M-pyrifera_M_contig7415.17560.1 vs. uniprot
Match: A0A7S2FCH2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FCH2_9STRA)

HSP 1 Score: 149 bits (375), Expect = 5.280e-34
Identity = 92/239 (38.49%), Postives = 133/239 (55.65%), Query Frame = 1
Query: 1495 WQLDRLHLVGRFLAVLSFVAASGPSLLSVLVMSMSWLFLLGLRVHSLALKEATGSIHVVVCFLFPYCFQYLVSLIGEWAPHWLPACLWYSFLMQMFCTSNHQYKHS---------------MSSH-----------------------LVPALRALLPVAFLCEVPSGRSYLLALNGSELLLLSFTLAAVRLRCLFSPIFLLSWSSQASAVFAIATCGPSPSLQYGQLLVSLASLHAVS 2097
            W   R  ++   + +LS V +    L+ +++  M  +FL+ L++H  A++EA  + +V  CF+FP+ FQ+LVSL+ EWAPHW P CLWYSFL+Q+ CT       S               MSS                        +V   R +LP+AF+ E  SGR+ LL LNG+ELL++SF LAAV+++C+ SPIF++SW+ Q   V A A  G  P LQY Q +++L SLH  S
Sbjct:  318 WYTQRGGILTVAVLILSHVVSFLVCLVGLVLAFMLAIFLMILQLHKYAVREALSNYNVAFCFVFPFNFQFLVSLVKEWAPHWAPVCLWYSFLIQLLCTRGKSSAPSTAGSDVTVGNTASGGMSSQANGTTTNATGGGGAVPSRGTSGGMVSVFRIVLPLAFVAEGVSGRTALLDLNGAELLVVSFLLAAVKMQCISSPIFMVSWAIQ---VLATAATGFHPVLQYCQFVLALTSLHICS 553          
BLAST of mRNA_M-pyrifera_M_contig7415.17560.1 vs. uniprot
Match: A0A7S2B5U5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B5U5_9STRA)

HSP 1 Score: 149 bits (375), Expect = 3.820e-33
Identity = 92/239 (38.49%), Postives = 133/239 (55.65%), Query Frame = 1
Query: 1495 WQLDRLHLVGRFLAVLSFVAASGPSLLSVLVMSMSWLFLLGLRVHSLALKEATGSIHVVVCFLFPYCFQYLVSLIGEWAPHWLPACLWYSFLMQMFCTSNHQYKHS---------------MSSH-----------------------LVPALRALLPVAFLCEVPSGRSYLLALNGSELLLLSFTLAAVRLRCLFSPIFLLSWSSQASAVFAIATCGPSPSLQYGQLLVSLASLHAVS 2097
            W   R  ++   + +LS V +    L+ +++  M  +FL+ L++H  A++EA  + +V  CF+FP+ FQ+LVSL+ EWAPHW P CLWYSFL+Q+ CT       S               MSS                        +V   R +LP+AF+ E  SGR+ LL LNG+ELL++SF LAAV+++C+ SPIF++SW+ Q   V A A  G  P LQY Q +++L SLH  S
Sbjct:  650 WYTQRGGILTVAVLILSHVVSFLVCLVGLVLAFMLAIFLMILQLHKYAVREALSNYNVAFCFVFPFNFQFLVSLVKEWAPHWAPVCLWYSFLIQLLCTRGKSSAPSTAGSDVTVGNTASGGMSSQANGTTTNATGGGGAVPSRGTSGGMVSVFRIVLPLAFVAEGVSGRTALLDLNGAELLVVSFLLAAVKMQCISSPIFMVSWAIQ---VLATAATGFHPVLQYCQFVLALTSLHICS 885          
BLAST of mRNA_M-pyrifera_M_contig7415.17560.1 vs. uniprot
Match: H3GEN9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GEN9_PHYRM)

HSP 1 Score: 122 bits (305), Expect = 2.060e-25
Identity = 81/229 (35.37%), Postives = 123/229 (53.71%), Query Frame = 1
Query: 1435 SGGIRSFFSGLIGAVLRTISWQLDRLHLVGRFLAVLSFVAASGPSLLSVLVM----SMSWLFLLGLRVHSLALKEATGSIHVVVCFLFPYCFQYLVSLIGEWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALNGSELLLLSFTLAAVRLRCLFSPIFLLSWSSQAS-AVFAIATCGPSPSLQYGQLLVSLASLHAVSMVD 2106
            S G+ +F     G +     W   RL++ G    + S+V +    + SV+++    + SW     +R+H +A +      H+  CF F Y F +LV  +  WAP W P CLWY+FL+Q+FCT+         + +V   R +LP+ FL E  S  S+LL LNG+ELLL SF ++A++   L SPIF LS ++Q   AVF     G    +Q+ QL ++L SLH ++  D
Sbjct:  241 SAGLAAFLGARRGCI-----WAAGRLNIKGILTTIFSYVESVLAVVFSVVLLLSLHAASWF----IRIHRVAFRAILTHRHIGFCFAFLYGFPFLVQYVFPWAPPWAPVCLWYAFLVQLFCTNG-------PTAMVTTFRVILPLVFLVEGISHHSFLLDLNGAELLLTSFIISALKTSNLCSPIFFLSLATQCLLAVFL----GSELVVQWLQLALALYSLHVMATTD 449          
BLAST of mRNA_M-pyrifera_M_contig7415.17560.1 vs. uniprot
Match: A0A6G0X9R3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X9R3_9STRA)

HSP 1 Score: 122 bits (306), Expect = 8.470e-25
Identity = 87/214 (40.65%), Postives = 118/214 (55.14%), Query Frame = 1
Query: 1468 IGAVLRTISWQLDRLHLVGRFLAVLSFVAASGPSLLSVLVMSMSWLFLLGLRVHSLALKEATGSIHVVVCFLFPYCFQYLVSLIGEWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALNGSELLLLSFTLAAVRLRCLFSPIFLLSWSSQA-SAVFAIATCGPSPSLQYGQLLVSLASLHAVSMVD 2106
            + A  R +SW    LH      ++LS V   G      +VMS   L   GL+ H LA++    + ++  CF F Y F  LV  +  WA    P CLWY+FL+Q+FCT         S+ +V   R LLP+ FL E  S  S+LL LNG+ELLL+SF L+AV+   L+SP+F LS S+Q  SAVF     G    +Q+ QL V+L SLHA++  D
Sbjct:  639 VDAASRILSWFFVHLH------SLLSLVLGIG------VVMSYQ-LLTYGLKFHRLAVRGLVFNRNIASCFAFLYAFPLLVQYVIPWAXXXXPVCLWYAFLVQLFCTQG-------STAMVATFRILLPLVFLVEGVSHHSFLLDLNGAELLLISFILSAVKTGNLYSPVFFLSLSAQCLSAVFL----GSELIVQWVQLAVALYSLHAMASGD 828          
BLAST of mRNA_M-pyrifera_M_contig7415.17560.1 vs. uniprot
Match: A0A8J5M5U0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M5U0_9STRA)

HSP 1 Score: 121 bits (303), Expect = 8.580e-25
Identity = 79/209 (37.80%), Postives = 116/209 (55.50%), Query Frame = 1
Query: 1495 WQLDRLHLVGRFLAVLSFVAASGPSLLSVLVM----SMSWLFLLGLRVHSLALKEATGSIHVVVCFLFPYCFQYLVSLIGEWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALNGSELLLLSFTLAAVRLRCLFSPIFLLSWSSQAS-AVFAIATCGPSPSLQYGQLLVSLASLHAVSMVD 2106
            W   RL++ G      S+V +    + SV+++    + SW     +RVH +A +      H+  CF F Y F +LV  +  WAP W P CLWY+FL+Q+FCT+         + +V   R +LP+ FL E  S  S+LL LNG+ELLL SF ++AV+   L SPIF LS ++Q   AVF     G    +Q+ QL ++L SLH +++ D
Sbjct:  364 WVAGRLNVKGLLATTFSYVESVLAVVFSVVLLLSLHAASWF----IRVHRVAFRAILTHRHIGFCFAFLYGFPFLVQYVFPWAPPWAPVCLWYAFLVQLFCTNG-------PTAMVTTFRVILPLVFLVEGISHHSFLLDLNGAELLLASFIISAVKTSNLCSPIFFLSLATQCLLAVFL----GSELLVQWLQLALALYSLHVMAVTD 557          
BLAST of mRNA_M-pyrifera_M_contig7415.17560.1 vs. uniprot
Match: A0A225VDK5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VDK5_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.890e-24
Identity = 85/232 (36.64%), Postives = 126/232 (54.31%), Query Frame = 1
Query: 1426 RVLSGGIRSFFSGLIGAVLRTISWQLDRLHLVGRFLAVLSFVAASGPSLLSV-LVMSM---SWLFLLGLRVHSLALKEATGSIHVVVCFLFPYCFQYLVSLIGEWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALNGSELLLLSFTLAAVRLRCLFSPIFLLSWSSQAS-AVFAIATCGPSPSLQYGQLLVSLASLHAVSMVD 2106
            +V S  + +FF    G +     W   RL++ G      S+  +    + SV L++S+   SW     +R+H ++ +      H+  CF F Y F +LV  +  WAP W P CLWY+FL+Q+FCT+        S+ +V   R +LP+ FL E  S  S+LL LNG+ELLL SF ++AV+   L SPIFLLS ++Q   AVF     G    +Q+ QL ++L SLH ++  D
Sbjct:  839 KVASALLHAFFGTRRGCI-----WVASRLNVKGLLATTFSYAESVLAVVFSVVLLLSLHVASWF----IRIHRVSFRAILTHRHIGFCFAFLYGFPFLVQYVFPWAPPWAPVCLWYAFLVQLFCTNG-------STAMVTTFRVILPLVFLVEGISHHSFLLDLNGAELLLASFIISAVKTSNLCSPIFLLSLATQCLLAVFL----GSELLVQWLQLALALYSLHIMAATD 1050          
BLAST of mRNA_M-pyrifera_M_contig7415.17560.1 vs. uniprot
Match: A0A329SLB6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SLB6_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.470e-24
Identity = 79/209 (37.80%), Postives = 116/209 (55.50%), Query Frame = 1
Query: 1495 WQLDRLHLVGRFLAVLSFVAASGPSLLSVLVM----SMSWLFLLGLRVHSLALKEATGSIHVVVCFLFPYCFQYLVSLIGEWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALNGSELLLLSFTLAAVRLRCLFSPIFLLSWSSQAS-AVFAIATCGPSPSLQYGQLLVSLASLHAVSMVD 2106
            W   RL++ G      S+V +    + SV+++    + SW     +RVH +A +      H+  CF F Y F +LV  +  WAP W P CLWY+FL+Q+FCT+         + +V   R +LP+ FL E  S  S+LL LNG+ELLL SF ++AV+   L SPIF LS ++Q   AVF     G    +Q+ QL ++L SLH +++ D
Sbjct:  846 WVAGRLNVKGLLATTFSYVESVLAVVFSVVLLLALHAASWF----IRVHRVAFRAILTHRHIGFCFAFLYGFPFLVQYVFPWAPPWAPVCLWYAFLVQLFCTNG-------PTAMVTTFRVILPLVFLVEGISHHSFLLDLNGAELLLASFIISAVKTSNLCSPIFFLSLATQCLLAVFL----GSELLVQWLQLALALYSLHVMAVTD 1039          
BLAST of mRNA_M-pyrifera_M_contig7415.17560.1 vs. uniprot
Match: G4Z8K6_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z8K6_PHYSP)

HSP 1 Score: 121 bits (303), Expect = 2.580e-24
Identity = 85/243 (34.98%), Postives = 130/243 (53.50%), Query Frame = 1
Query: 1405 PSVAQRLR--VLSGGIRSFFSGLIG--AVLRTISWQLDRLHLVGRFLAVLSFVAASGPSLLSVLVM----SMSWLFLLGLRVHSLALKEATGSIHVVVCFLFPYCFQYLVSLIGEWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHLVPALRALLPVAFLCEVPSGRSYLLALNGSELLLLSFTLAAVRLRCLFSPIFLLSWSSQAS-AVFAIATCGPSPSLQYGQLLVSLASLHAVSMVD 2106
            P ++ R+R  +  GG  +  +GL+      R  +W   RL++ G      S+V +    + SVL++    + SW     + +H +A +      H+  CF F Y F +LV  +  WAP W P CLWY+FL+Q+FCT+         + +V   R +LP+ FL E  S  S+LL LNG+ELLL SF ++A++   L SPIF LS ++Q   AVF     G    +Q+ QL ++L SLH ++  D
Sbjct:  871 PPLSARIRQGLRKGGSAAASAGLVAFHETRRGCAWAAGRLNIKGLLATSFSYVESVLAVVFSVLLLLSLHATSWF----IHIHRVAFRAILTHRHIGFCFAFLYGFPFLVQYVFPWAPPWAPVCLWYAFLVQLFCTNG-------PTAMVTTFRVILPLVFLVEGISHHSFLLDLNGAELLLTSFIISALKTSNLCSPIFFLSLATQCLLAVFL----GSELVVQWLQLALALYSLHVMATTD 1098          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7415.17560.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G913_ECTSI2.520e-18248.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2Y1S5_9STRA3.300e-3735.93Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2FCH2_9STRA5.280e-3438.49Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2B5U5_9STRA3.820e-3338.49Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
H3GEN9_PHYRM2.060e-2535.37Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6G0X9R3_9STRA8.470e-2540.65Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8J5M5U0_9STRA8.580e-2537.80Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A225VDK5_9STRA1.890e-2436.64Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A329SLB6_9STRA2.470e-2437.80Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
G4Z8K6_PHYSP2.580e-2434.98Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7415contigM-pyrifera_M_contig7415:1286..11641 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score539.3
Seed ortholog evalue2.8e-150
Seed eggNOG ortholog2880.D7G913
Hectar predicted targeting categoryother localisation
EggNOG OGs2CXGS@1,2RXB7@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons16
Model size2543
Cds size2181
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7415.17560.1prot_M-pyrifera_M_contig7415.17560.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7415 1621..11614 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816639.4757094-UTR-M-pyrifera_M_contig7415:1285..16201622816639.4757094-UTR-M-pyrifera_M_contig7415:1285..1620Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7415 1286..1620 -
1692278092.6619823-UTR-M-pyrifera_M_contig7415:1285..16201692278092.6619823-UTR-M-pyrifera_M_contig7415:1285..1620Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7415 1286..1620 -
1622816639.726012-UTR-M-pyrifera_M_contig7415:11614..116411622816639.726012-UTR-M-pyrifera_M_contig7415:11614..11641Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7415 11615..11641 -
1692278092.846477-UTR-M-pyrifera_M_contig7415:11614..116411692278092.846477-UTR-M-pyrifera_M_contig7415:11614..11641Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7415 11615..11641 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816639.48911-CDS-M-pyrifera_M_contig7415:1620..16901622816639.48911-CDS-M-pyrifera_M_contig7415:1620..1690Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 1621..1690 -
1692278092.675825-CDS-M-pyrifera_M_contig7415:1620..16901692278092.675825-CDS-M-pyrifera_M_contig7415:1620..1690Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 1621..1690 -
1622816639.5071647-CDS-M-pyrifera_M_contig7415:2461..25891622816639.5071647-CDS-M-pyrifera_M_contig7415:2461..2589Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 2462..2589 -
1692278092.6860747-CDS-M-pyrifera_M_contig7415:2461..25891692278092.6860747-CDS-M-pyrifera_M_contig7415:2461..2589Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 2462..2589 -
1622816639.5261889-CDS-M-pyrifera_M_contig7415:3225..33631622816639.5261889-CDS-M-pyrifera_M_contig7415:3225..3363Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 3226..3363 -
1692278092.6980762-CDS-M-pyrifera_M_contig7415:3225..33631692278092.6980762-CDS-M-pyrifera_M_contig7415:3225..3363Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 3226..3363 -
1622816639.5404713-CDS-M-pyrifera_M_contig7415:3606..36721622816639.5404713-CDS-M-pyrifera_M_contig7415:3606..3672Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 3607..3672 -
1692278092.7115433-CDS-M-pyrifera_M_contig7415:3606..36721692278092.7115433-CDS-M-pyrifera_M_contig7415:3606..3672Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 3607..3672 -
1622816639.554302-CDS-M-pyrifera_M_contig7415:3846..39521622816639.554302-CDS-M-pyrifera_M_contig7415:3846..3952Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 3847..3952 -
1692278092.7217772-CDS-M-pyrifera_M_contig7415:3846..39521692278092.7217772-CDS-M-pyrifera_M_contig7415:3846..3952Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 3847..3952 -
1622816639.5688648-CDS-M-pyrifera_M_contig7415:4144..43361622816639.5688648-CDS-M-pyrifera_M_contig7415:4144..4336Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 4145..4336 -
1692278092.7327635-CDS-M-pyrifera_M_contig7415:4144..43361692278092.7327635-CDS-M-pyrifera_M_contig7415:4144..4336Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 4145..4336 -
1622816639.5808818-CDS-M-pyrifera_M_contig7415:4849..49971622816639.5808818-CDS-M-pyrifera_M_contig7415:4849..4997Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 4850..4997 -
1692278092.743944-CDS-M-pyrifera_M_contig7415:4849..49971692278092.743944-CDS-M-pyrifera_M_contig7415:4849..4997Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 4850..4997 -
1622816639.5939167-CDS-M-pyrifera_M_contig7415:6024..61571622816639.5939167-CDS-M-pyrifera_M_contig7415:6024..6157Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 6025..6157 -
1692278092.753023-CDS-M-pyrifera_M_contig7415:6024..61571692278092.753023-CDS-M-pyrifera_M_contig7415:6024..6157Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 6025..6157 -
1622816639.6060596-CDS-M-pyrifera_M_contig7415:6460..66391622816639.6060596-CDS-M-pyrifera_M_contig7415:6460..6639Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 6461..6639 -
1692278092.7630658-CDS-M-pyrifera_M_contig7415:6460..66391692278092.7630658-CDS-M-pyrifera_M_contig7415:6460..6639Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 6461..6639 -
1622816639.6183734-CDS-M-pyrifera_M_contig7415:6790..69171622816639.6183734-CDS-M-pyrifera_M_contig7415:6790..6917Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 6791..6917 -
1692278092.774112-CDS-M-pyrifera_M_contig7415:6790..69171692278092.774112-CDS-M-pyrifera_M_contig7415:6790..6917Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 6791..6917 -
1622816639.636594-CDS-M-pyrifera_M_contig7415:7387..76921622816639.636594-CDS-M-pyrifera_M_contig7415:7387..7692Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 7388..7692 -
1692278092.7848341-CDS-M-pyrifera_M_contig7415:7387..76921692278092.7848341-CDS-M-pyrifera_M_contig7415:7387..7692Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 7388..7692 -
1622816639.65353-CDS-M-pyrifera_M_contig7415:8210..84301622816639.65353-CDS-M-pyrifera_M_contig7415:8210..8430Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 8211..8430 -
1692278092.79654-CDS-M-pyrifera_M_contig7415:8210..84301692278092.79654-CDS-M-pyrifera_M_contig7415:8210..8430Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 8211..8430 -
1622816639.6685765-CDS-M-pyrifera_M_contig7415:8612..86891622816639.6685765-CDS-M-pyrifera_M_contig7415:8612..8689Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 8613..8689 -
1692278092.8076541-CDS-M-pyrifera_M_contig7415:8612..86891692278092.8076541-CDS-M-pyrifera_M_contig7415:8612..8689Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 8613..8689 -
1622816639.6826153-CDS-M-pyrifera_M_contig7415:9564..96341622816639.6826153-CDS-M-pyrifera_M_contig7415:9564..9634Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 9565..9634 -
1692278092.8162756-CDS-M-pyrifera_M_contig7415:9564..96341692278092.8162756-CDS-M-pyrifera_M_contig7415:9564..9634Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 9565..9634 -
1622816639.6966927-CDS-M-pyrifera_M_contig7415:10419..105741622816639.6966927-CDS-M-pyrifera_M_contig7415:10419..10574Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 10420..10574 -
1692278092.826145-CDS-M-pyrifera_M_contig7415:10419..105741692278092.826145-CDS-M-pyrifera_M_contig7415:10419..10574Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 10420..10574 -
1622816639.711838-CDS-M-pyrifera_M_contig7415:11547..116141622816639.711838-CDS-M-pyrifera_M_contig7415:11547..11614Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 11548..11614 -
1692278092.8363729-CDS-M-pyrifera_M_contig7415:11547..116141692278092.8363729-CDS-M-pyrifera_M_contig7415:11547..11614Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7415 11548..11614 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7415.17560.1

>prot_M-pyrifera_M_contig7415.17560.1 ID=prot_M-pyrifera_M_contig7415.17560.1|Name=mRNA_M-pyrifera_M_contig7415.17560.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=727bp
MAKEFTPSSCSAPSDAPLEPMPGGPQLHMLSEKLPSKRGFSAAVGSEVKT
AAVEVRSWSTSAFIPRDAPSKAPESAVQAGLGDRGQNRRHHPGEEIPGAA
WPTRSTALPTRPAPLSSSRHQQMVVNQGQRSGPPGFPPLGIISERPNQVQ
GQAFGGSPGPLQRRDRVDHSKYQGSKLGHHTDGTWDPNKRRPPNDAGPQS
VGVPHAGRSQRKNRNQGALYQVQPHGQADNRTRNSMKNAGSAGRDQFREE
ASGRPQRLDEDQVGSKSSSRNRIPNNQSSIRRASHDPTNSSGQDTATKVP
SRRQKMCVEHAQQSTADAHPKPTGNAVLNGSAPGLSPIRPGQEILAKAAP
GRLPSPAKQDAPLAEDVLSDHGEPPFAPGGISNQPPGQWVSNSGERAARQ
AKSGEDSGGHLQPHVCKEKEKEKEKPKPKKKEEKTYRPGSKILLGTTAKE
PSRSRGGSRPSVAQRLRVLSGGIRSFFSGLIGAVLRTISWQLDRLHLVGR
FLAVLSFVAASGPSLLSVLVMSMSWLFLLGLRVHSLALKEATGSIHVVVC
FLFPYCFQYLVSLIGEWAPHWLPACLWYSFLMQMFCTSNHQYKHSMSSHL
VPALRALLPVAFLCEVPSGRSYLLALNGSELLLLSFTLAAVRLRCLFSPI
FLLSWSSQASAVFAIATCGPSPSLQYGQLLVSLASLHAVSMVDVMLNSRY
YHARYRAGMSLTNGFRAISSSHTLLR*
back to top

mRNA from alignment at M-pyrifera_M_contig7415:1286..11641-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7415.17560.1 ID=mRNA_M-pyrifera_M_contig7415.17560.1|Name=mRNA_M-pyrifera_M_contig7415.17560.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10356bp|location=Sequence derived from alignment at M-pyrifera_M_contig7415:1286..11641- (Macrocystis pyrifera P11B4 male)
CGCCTATCTGTGGAAGGCACGAACCCCATGGCGAAGGAGTTCACGCCGTC ATCATGCTCAGCACCGTCAGATGCTCCACTCGAACCTATGCCAGGTGAAA CGGCTATCCTGCTTCTGAGAAGTTGGCCTTTTTCAATGCGACGGAGTGTG CCCTGTTGTCCTCAACGGTTTGATTCGATCATGCAAGCCCTTTATTTTTG GGTTTTTGCGAACATGCCCATTTGTTGGCAGGAACACGAAAGCCGCTGCC GCCATTTTTGTCCTAACTGATGTAGGAAACAGGAGATGTTGGCGGCATTT CTCGAGTATTTGAAGATGCCTAGTATTGTATAATAACGTGTTCTCTGAAG TGTGTGGATCATGGTGACCCCTGCAATATATTCCGTATACTGTAATCAAG ATAGCACCCCCTCATTGATGAGTTTTCGAGTGACCACACATGCCTTATAG GGGGGGCACACAAAACGAAAATGGTGGCTTCGGAAAGATCATCTCTTCGC GATGTTTCCATAGACGGCACTTGTACTCCCGCCCTTGTCTTGTCGAGAAG GTCAGCCTGGAAAATCGTCCGAGGGTGTGTGTCACTACTAATCTCAATAT CAACAGTGGGTGTGTGTTATCTTATGAAACGTGTGTCACACGGTACGCCC GACAGGGGGCTCAAAAACGTAAACCTTCATTAAACCAGACTTCGCTCCAC GTTGTCAACCTGCCCTTTATATCGCGAGCAACACGCTGGAGAATGCTGTT AGCTAAAAAATTCTTGGCATGGCGTTCTCTTAGCATGTGTTGGAGGGTTT CAATAGAGCCATGCGTTTACAGACGTCCAAGTGCAGCGCCTACGTGGCAA CTTGCATGACGGTCATGAGCCCCACAGCACGTACATTTTTTTTAGGTCTC ATTATTTTCTTCAAGAATGCACTTTCATCTTTATCCAAAGAAGACCGGCC GAAAACGTGTTGTGTAGGCCATGCTTCGGTTGGAAACGTTCTTCCCTAGA TAGCCGGGTTGAATCTGTTGGCCGAACAGGTCGACTTAACAGGAGGTACA CCCACGTCTGCACGCAGGTGGTCCTCAACTGCACATGCTGTCAGAAAAGC TACCGTCCAAACGGGGGTTTTCAGCCGCTGTTGGTTCAGAAGTGAAAACC GCTGCGGTCGAGGTGAGATCTTGGAGTACTTCGGCATTTATCCCACGAGA TGCCCCCAGTAAGGCTCCCGAGGTAGTCTAGCCTGGCGTCAAAGCATGCA GTACAAATGGTTAATGTGGTTCAAATGGTTCAAATGGTTGCGTACGACAG ATTGAATACCAGGTAGCTCCTTGCGTACTGAAAATCGCCCGTGTTTGACA AACCTGCATATTATCAAAGGTATTTATGTCGTTGTGTATCGACCCGCCAC GCCGGTGTTTGCGCACTTTTCGCTGTTTGTAGCACCCTCATCAAGACTCT CGTCTGAGCCTCTCCACGATAGTGAGACGATTTAACATACATACCTACCG GTATACTAGATTAGTAGCGTTCCCCACACCAGGGGGAAGGGATATAGAAG AAGGTGAAACAGAAAGCCAAAGGGAGCGAGGGGCCGGCTATGCCCATCAG GTAGGCGATACAAACCAACGCGGTCGCGTATTCCTCCGTACAGACCATCT CCGAATAGGCCATCTCCATTTTCCAAGGGTTGTTGCCAACAACCCGAGGC GAAATTCCTAGAATATGCCTACAGTAGCTCCAGTCCGATCAACCGACTAT TCTCTGTTCACCAATAGCTATACTTTTGCTACGTATATGATGCAGAAAAC GAACACCCGCAACAGCATCATTCGACCATAAAACACCCCTCCTGCGGCAG GCATGCTCTCAGCTCCGATTGTCACGCCGATGTGTACTGCCTTAGTCTAT ACCAGTTATACTTTATACCTAAGGCACCGCATTGGGGTACAGTGACACAT CCCGTACAACGCCCACCCACTGACACCGTTTGTACGCAATTTTCATTTTG CGTACAGTCGGCTGTTCAAGCTGGGCTTGGGGACCGCGGACAGAATCGAA GGCATCACCCAGGTGAGGAAATACCTGGTGTAGCTTTTTACAACCGACGT GTGTGGGAGTTCTACCGGCTCTGTTCTGTTGCGCTTGTGCTCCTCAACAC CTTTAATAATAAAAATACTGTAGTACTGGAGTCCCTTTTTGGGGGACAAA GGGCTTGGAAATAGTGTCGGGTTACTCGTAGTGTGTTGTTGCCTGCAGTA GTGAAAGAGTTAATCAGCTTGCGCTTTGCGTTTTGACGCAGCCGTGAGGG ATCGGTACGGCAGGGTGTACACCGCGTTCGCTCTGTCACGATTTTCAGCA GCGAAGGTTGTTCGGTGGATAAGTTAAAGTCCGGTCGTGTGTACGGTGTG TACGTACATGCGTCGGTGCTCACGTGACGGGAGCCTTGTTTATCGCTCGT ATATACATATCGGTACCTTGTGCGTGGAGGGACAGGTCAGAAACAATGCT CGTGCGAATGAGATAGCTCATCTCCAGCGAATATCACCATAGTTTGGCGG CGAATCCTAATGGTTTGAAAGGAATACCCCTGTCATATCGTACGGATTGA CTGAGAGTCTTGATCAGAAGCGAATGGAAACGGCTCATGCATGTTGGTTG GGGAATGATGTTTATGGTGCCACCACATCTTGTGCAAACTCTAGAGTGGT ACGGCGCACCCGGGTGGTGCTGTGGACATGGGCAGGCGAAATATCAAAAT GTCTCTGCGATGTTTCACGCGGTAGCCGTTGACCATCCTTCACAATCGGC GCCTGTTCTTGATAGCTTGGTGGGGCTATCATACCGATGGACAATGATAG CCAAGAGCCAGGCGCGAGGATACCGACCAATCTGTCCAAAAACATCTTAC TCAGCCGTATTCCGATCGGTCCACGATGCCTTTGACTGTTTGGTTTCCGA AGGCGCGGCGTGGCCGACTCGCTCAACTGCGCTGCCTACTCGTCCTGCCC CTTTATCGTCTTCGCGCCACCAGCAGATGGTGAGTGGTCACCATCAAGCT TGACGCGTTTATTGTGTACACCCATTAATAGTGGGTCGTATGTAGTTCTG TGTGATTTGCAGAGTTGTAGACCGCTCACGGGGGGGGTCGAGAACGTGGC AAAGCTTGCGAGTTTGACAGCGCGTTTGTCGAATGGTTCTCCCTGCTGTA CGCCTGACTAGGTTGTAAATCAGGGGCAACGGTCGGGGCCGCCGGGTTTC CCCCCTCTGGGAATCATTTCAGAAAGGCCCAATCAGGTGCAAGGGCAAGC GTTTGGTGGATCGCCGGGGCCTCTGCAGCGACGAGACCGTGTCGATCACA GCAAATATCAAGGCAGCAAACTCGGGCATCACACAGACGGAACATGGGAT CCGAACAAGCGGAGGCCGCCAAATGATGCTGGTTAGTTTCCCTCTTCTAC TGACCACAGCAGTTGTCGCGATGGAGGAACATGTTCTGTCAGTTATGGTG CAATTGCACGAAGCCGACGCTTACCCATCTATATCTACATTGGGAGACAT TGCCTCTCTTGTAAACGCGGCGAGGTGGGGTTCGCTTTCGTTTCTTGCTT CGGTCTTTGTGCAGAAGCGTTTCGTTGCAAGTGGGGGGCACGGCTATTAC AGCTGCTATTTGATGTGCACCCCTCGAGTACGAAACAAGAACTCCTTCCT CACTAGTACATTATTGCCGCAATGGCGCGCGAAATGTCGCAATTGCGCGC GAAATGGCATTGGAGACGTGACAAAAACGCCATGTCGGAAAAAGCAGAGT TTCCGAATGAACCATTACTTTTAGCAGGCTTGTGGCATACGCCGCACATA TCCCAAACACTAATGCACTCTCGATTTCAAGCCGGAGAAGTACAGTAGTT AAAAAACGGATGTTCGTTCCGATTTCCACCGCTGTCCGACATTCGGCAGG TCCCCAGTCTGTTGGCGTGCCCCATGCCGGACGTTCACAGCGTAAGAATC GGAATCAAGGCGCCCTCTACCAAGTGCAACCGCACGGGCAAGCTGATAAC CGCACGAGAAACTCCATGAAGAATGCGGGCAGCGCTGGGCGCGACCAGTT TCGCGAGGAGGCCAGTGGTCGCCCTCAACGACTCGACGAAGACCAGGTCG GATCCAAGTCGTCATCTCGAAACAGGATCCCAAACAACCAATCCAGCATC CGCCGAGCATCCCATGATCCAACAAACAGCTCAGGGCAAGACACCGCAAC AAAGGTAGGACAATTCTAGAGATGTATACATACCGTGTACCAGGTATTTA GAGTTTTGAATGGGTTCCCCTGTATCCTTGCCATCCTCGTTAGTCCCCAG AGCGCGTTATGGCAGTTCTGATCGAAGCTGTGTTCTCACTTGTGGGTAAA ATGATGTACCAGTATCATTTAACTTTTGCTATGAATACTGAACCAACGAT TTAGGCTTTCAGGCGAGGAAACTGGACGTAGCCACCACGATAGATGAAAC ACACCACATGCGCAGGGTACATGCTGTAGATGTACCATCTTCCTGCCCAC GCCTTTCCTTGTTTTGGGTACTCACTGGGACGGTTCGGTGCACATTGCGA GTAGTCTGGGATCGCGGGTCGAAGAGAAACTACTGTATGCCGATCCGAAG TACTCCAATTTTAAGTCCGATGAGTAACCAATTCTTGTATTTGGCACGAT GCTGGTTCCTTACCTTCGCGGCAGGTCCCTTCCAGGCGGCAAAAGATGTG TGTCGAACATGCTCAACAATCAACTGCGGATGCGCACCCGAAACCTACTG GAAATGCTGTCTTGAACGGGTCCGCGCCAGGTCTGTCACCTATTCGGCCA GGTGATATGATGTTCGTGTCCCCTGTTGGTTTGTGATTCCTTGTCTTTAT CAACGACGCTCGGCGCGAGGCATGCTTGCACTACTGTTTACGTTCGCTGC CTGCTCATTTTGAGCGTGCTCCGTGTGGTCGATCATTTTGCACACGCCGC AGGCCAGGAGATACTAGCAAAAGCGGCGCCAGGTAGACTGCCTTCTCCCG CGAAGCAGGACGCGCCGCTTGCCGAGGATGTGTTGTCCGATCATGGCGAA CCACCTTTCGCACCTGGTGGTATTTCAAATCAGCCACCAGGGCAATGGGT GAGCAACAGCGGCGAACGCGCTGCTCGGCAGGTGAGTTTGTATTGGTTGA TTCGTATTTAATTGTGTCGCACCCTATTGCGTCAGCTCTTGATCGAGGAA GCGACCGCCGGAAAACCTACGGGTGGTATTGTTTGTGTGCGCTCTAATTT TACCATGTACTGGTATAAGTGAATTTGTTGAGTTTATGAGCGACAGTAAC ATGCGCTTCATGCCGCACTATCTGCCATATCGCCTTCGTGCTTTGTTTGT ATTCTTGGTCTTGAGTACGTTTGTAGCCTGTGGTACCCAAAGGGCAATAC TTAACGTACCACTCAAAACATGATCTCATTGAAGGCCAAATCCGGCGAAG ATTCGGGAGGCCACTTACAACCGCACGTATGCAAGGAGAAAGAGAAGGAG AAGGAAAAGCCCAAACCCAAGAAGAAGGAAGAGAAGACTTACCGACCTGG ATCCAAGATACTCTTGGGTAAGTTACGAACAGAGACATTCATACCCACGT ACGCACGTCGTTTTCGCATTATTAATAAATGTGGCACTCTTGGGCAGCTT CGTATTAATATTGATAGGCCAATCGCTATTAACAGGTTATATATGCAAGT ATAATGTTTGCTCGACTCTCTGACTTTCGCACGGAGACTCGTCATTAATT AGCATGATCTATCTTCAGCTATCTCTATGTACACCTTTGGCATCGGGCCT CTCGATAGCCAATCGGGCATTCGCAAACGGGCGAGTCGTACGATCTGGTC CTGCCTAGAAACGGATAATGATGTAGGAGGCTGTAGCGCCGCCGCTTTTG CGAGTTAGGGCTTGAAAATTGGACGCATTGACCCTGGCACAATTGCAGTA CATGTGCGTGTCCTAAAAAGTTTAGAAACCGAATCGATCTCGACGCGCTA TTGGATAAAACTCAAGAAAACCGTTTTTTTTGCCGATATTTTTGCAGTAA TCCCCTTTGACAGGTAAGAAACTCGTCGTTTCCGATCAAAGTGAAACCTG GTACAGACAGTGCTAAGCCCCAGGTGGTATTCCCTGGCAAAATGGCAATG GTTGCTACCATGCTACCAGATACGTTTGGTAGGTACTGTTGCTTTGAAAG TGTAACTGCGTCGAAATTCGTGGGAGATCTCAGTTGCATCGGGTTTCAAT CATGACGTCGAAGTCCATAAGTGGCCAAGTGGTGTCAGTTGCAGAGAGAA GCACAAGGCAGTACCAGGTAGATACCTTTCAGCCCGAGGAACCAAGCAGC CGTTGACGTGCCAGAGTGCTTCGCCATACGATACATTTTACGATCCGTGC TTCACATGCCCGAAATAGATACACCTGACCAGGATTGTGTTGATTTTTAC GACGTACCAACGTCACGTTATCATACTTGGTTAGGCATGCTACTTTCATC CCCACGCGTCTAGGCGTCGGGCGTAAGTAGTCTCTTGCGTGTTCGTGTTG ACTTTCACTCCGCAACTCGTTGTTTTCCAACATATTTGTGGCAGGGACCA CTGCCAAGGAACCTAGCAGATCGAGAGGTGGTTCTCGCCCGAGCGTTGCA CAGCGTCTGAGGGTGTTGAGCGGTGGCATACGCAGTTTTTTTTCCGGTCT AATTGGCGCGGTACTTCGAACGATCAGCTGGCAGCTCGACAGGTCGGTTG TGCTTTTTTTTTTTTTACTACGTTGACTCCTTGCGAGATGAATGTCGGCA CACTATGCACTAGATGTCAAACATATGACGATGAGGATACAGTCTACCGT ACTTGTAGTCCTTACGCCTACGAGTAAAAGGCCCACGAAGCTTGCGCACT TATGTTGAGACGCGGTGGCGAACCGACAGGATCCCGTTTTCTCTTCGGCC GACCTCCTATCGACTGCAGGGGCCAGGGCCCAGCAACGCCCGAACTTTCC TGTGTCATAGCAGGTATCAACTGTTTAGTTGCCACGAGGGTCGACGGCGG CCGTTCACCCCACGTGTGCGTTTTGAACGTCTTAGGAGTTACTTGCACTC GAGCCCAGTCACACATCGTGTTGTGAGCCTGCTGCGGTTACATCTGTCTT GTTCGTGTTATACTGTTGGTGCCGTTTCTGACCCAGCATGACCCGAACCA TGTTGTTTTGTGTCCTGCGTGGATGCAAACCCTGCTGCGACTCCATGTCA AACAGGTTGCACCTGGTTGGGCGCTTTCTGGCCGTGCTTTCGTTTGTAGC AGCTTCTGGGCCGTCCCTGTTGAGTGTGCTCGTCATGAGCATGTCTTGGC TGTTTTTGCTTGGGCTTCGGGTTCATTCTCTTGCGCTGAAGGAAGCGACG GGCAGCATTCACGTCGTGGTCTGCTTCCTCTTCCCATACTGCTTCCAGTG AGTGCAAAATAGATGCTACGATTGCTAATATTTCACCACGTTGCATCTAT TAATAGGTTGTTAAGACGCTTCGCAGGCAGGAATGCTAGTAAATTTTCTG GGCGATGAGACCGTTCGCCAACCAACCGTTTAGAATGTGCTCTTTCTGTA CTCGTGCACTGATATTCACCCTGTGCTTTTTGCTTGCAGGTACTTGGTGT CGTTGATCGGCGAATGGGCGCCCCACTGGCTCCCCGCTTGCCTGTGGTAC AGCTTTCTGATGCAAATGTTCTGCACCTCCAACCACCAATATAAGGTGGA CACTTTCATATTTTAATTTTAATTTGTAGAGGGTATGCTCTTCACAGCTT TTCCTGTCGATACAAGTCTTTGAGTCTTGCCTTGACACTGCCTACTGCAT GCACCAGTGGGCGACAGAAGTGACTCACCTACTCTTGTCCACGCTTCGTT CTCGACTCTTGCATACCAGCACTCCATGTCTTCCCATCTGGTACCCGCTC TTCGAGCACTACTGCCAGTGGCTTTTCTCTGTGAGGTGCGTGTAGCGACC CGTTTATCCAGTTTCCCTGTAGGTTGGTCGCACCAGATTATGTTTTCTTT TCTATATGTGCTCTTTCGTTGCTGTGGGCCGAGCGCCCACGGATGGATGC GTCTTTAGTAGTGCGTCTAACTTTGGGAACTTGTGGCGTGTTTGGCGTCG CGAAGAGAAGGAATACATTTGCCTTGTACCCACTGCGCGTGCATGCCCGC AACTCACATGCGCAATTCCCCGAATCAGGTGCCATCTGGACGCAGCTACC TGTTGGCTCTTAATGGATCTGAACTGTTGCTGCTGTCTTTCACACTGGCG GCAGTGAGGCTGCGCTGCCTTTTTAGCCCGATATTTCTCCTGTCGTGGTC TTCACAGGCGAGTGCAGTTTGCGTATCATCATCGCGATCCTTGCCATGCT CAGGTTGAGTAAACGGATACAGGATCCTTTCTACCTTTCTACCTTTCTAC CATGGTATCTTTGTATCGGTAGGTGGGGCTGTGAGTTAGTTGGCTAACTA CTGTAACTGTACGTCGCCGACTGGTGACTTGTTGGCTATCATACCATACA GCACGCATTAAAGTTATTAATAGTTGCATGTGGAAATTGGAAGAATTCTG TGTCTTGATATCTTGACTGGCGTGTTTGTGGCTCGACGTGATATTGTTTT TTCGTTGATGAGTACGTCAGTTATAATAGTGTCTTGGCCAGCTAACTAGT AATAATACAGTACTGCTGTAGTTTTTTTTCAAAATCCTCCGGCGGTTTGG TAATAATGAAGCTTGAGCTCATCACACTTCCACGTTCCAAGTTCGTGTCG TGTGTACTGTAGTGTACTGTTATTAATAGTACTGTACAGTAGCCGTCAAG TCCAACCAACTCACAGCTCTAGATATATGTGACTGCTATAGATACAATAC CGTACATGTGACTACACTGCATGTCACGAGGGCAGCCTGCGTTGCCATGT CTGGATACTGTCCCGACGACTTTATTTTTCGTGTTTGTGCGGGATTACCC AGGTATTCGCAATCGCGACGTGCGGTCCTTCCCCTTCGCTTCAGTACGGC CAGCTGCTCGTATCTTTGGCGTCCCTTCATGCAGTGTCCATGGTGGACGT AATGCTCAACAGCAGATATTACCACGCCAGGTAGGACAGGCGTGATCGCT TTCGAATGATGTCAATATTATTGAAGTGTTGCCGGAATGCGGGCAGCTAC GAGTACTAGTTATTGCCCGAGCCGGGTACATGTAGTATTACGGCGGACCA TAGTAAATAGGACCAAATATTAGTAAAGAGCGTGTGTACCGTAGGTCCTA TTTACAATGGTCCCCCGTAATAGTAGAGCTTTAGACCAAAAGCGATTATT GAGTAGCTTCGTTCCCTAGATCGCGGTGGGTGTTGCCGCCTAGAGGAGGT TGCACTGAATGACCAATGGAAATGTCGAGCTCCGCACGAACAACCGATAT CTATCATCGTGTATTTTTTGTCCAATTGGTTGCGTGTTGTTTTGGCTGTC TCGACAAGTGGTACGGCCTTTGTCGCGGGCAAGTATACCACCGAAGTTAC TGTTTTTTTTTTTTTCTTGTGACCTAAAATTGACTGACAAGCGAATACTG AATGTGTTGCAAACCTTGGATCACCTTTACCTCATATCTGTAGATTTTCC TACGATTAATCTTGATGAGTAAACGCTATATCGGCACCAATAAAATCGTA TTGTGTGGAGGTGGAATTGGGTTCTGCCGCCACGTCGCCTCCTGCTGGCG GAGCTCACTGTTGTATTGCCGCGTCTTGTATTTTGTCGGTACGAGGGGCC ATATGGCATGCATCGAGCGCCAAATTTGGAAGTCCACTATCTATACTACT TGTATATTATTAATAATGTCCACATCCCTGTCTCGTTGCTTTGTTGTGCA GGTACAGGGCTGGAATGAGCCTTACGAACGGGTTTCGGGCCATTTCCTCA TCGCATACGCTGCTTCGATAGGTGGAAGTGCGCATTTTTCAGGGCGTTAT GTGGAAACCCTCCTACTGTAGTTGTGGTCCCTTAGCAGATCTACAAAGCT TCTACTCGTAGCTTGGGCCGCTAAGGAGAATATTTGTCTTTGTTTTTTGC GTGGAAAGCGAGTATACTCAACTTGATCAGGTGCGTAATCGAATAATGAC CTCTTGATAAGCTGGTTTCACCTTGCCTCAGATGTCATGCGTCGAGTGGG AATATCTACAGGCCCCGTAGTTTTTTTTGTGATGACTGGTTAGATTTCTC TTACGGTCTATATACGCACACGCATTGGCGTGGATGACAGCAACTATGAA ATCTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig7415:1286..11641-

>mRNA_M-pyrifera_M_contig7415.17560.1 ID=mRNA_M-pyrifera_M_contig7415.17560.1|Name=mRNA_M-pyrifera_M_contig7415.17560.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4362bp|location=Sequence derived from alignment at M-pyrifera_M_contig7415:1286..11641- (Macrocystis pyrifera P11B4 male)
ATGGCGAAGGAGTTCACGCCGTCATCATGCTCAGCACCGTCAGATGCTCC
ACTCGAACCTATGCCAGATGGCGAAGGAGTTCACGCCGTCATCATGCTCA
GCACCGTCAGATGCTCCACTCGAACCTATGCCAGGTGGTCCTCAACTGCA
CATGCTGTCAGAAAAGCTACCGTCCAAACGGGGGTTTTCAGCCGCTGTTG
GTTCAGAAGTGAAAACCGCTGCGGTCGAGGTGAGATCTTGGAGTACTTCG
GCATTTATCCCACGAGATGCCCCCAGTAAGGCTCCCGAGGTGGTCCTCAA
CTGCACATGCTGTCAGAAAAGCTACCGTCCAAACGGGGGTTTTCAGCCGC
TGTTGGTTCAGAAGTGAAAACCGCTGCGGTCGAGGTGAGATCTTGGAGTA
CTTCGGCATTTATCCCACGAGATGCCCCCAGTAAGGCTCCCGAGTCGGCT
GTTCAAGCTGGGCTTGGGGACCGCGGACAGAATCGAAGGCATCACCCAGG
TGAGGAAATACCTGTCGGCTGTTCAAGCTGGGCTTGGGGACCGCGGACAG
AATCGAAGGCATCACCCAGGTGAGGAAATACCTGGCGCGGCGTGGCCGAC
TCGCTCAACTGCGCTGCCTACTCGTCCTGCCCCTTTATCGTCTTCGCGCC
ACCAGCAGATGGCGCGGCGTGGCCGACTCGCTCAACTGCGCTGCCTACTC
GTCCTGCCCCTTTATCGTCTTCGCGCCACCAGCAGATGGTTGTAAATCAG
GGGCAACGGTCGGGGCCGCCGGGTTTCCCCCCTCTGGGAATCATTTCAGA
AAGGCCCAATCAGGTGCAAGGGCAAGCGTTTGGTGGATCGCCGGGGCCTC
TGCAGCGACGAGACCGTGTCGATCACAGCAAATATCAAGGCAGCAAACTC
GGGCATCACACAGACGGAACATGGGATCCGAACAAGCGGAGGCCGCCAAA
TGATGCTGGTTGTAAATCAGGGGCAACGGTCGGGGCCGCCGGGTTTCCCC
CCTCTGGGAATCATTTCAGAAAGGCCCAATCAGGTGCAAGGGCAAGCGTT
TGGTGGATCGCCGGGGCCTCTGCAGCGACGAGACCGTGTCGATCACAGCA
AATATCAAGGCAGCAAACTCGGGCATCACACAGACGGAACATGGGATCCG
AACAAGCGGAGGCCGCCAAATGATGCTGGTCCCCAGTCTGTTGGCGTGCC
CCATGCCGGACGTTCACAGCGTAAGAATCGGAATCAAGGCGCCCTCTACC
AAGTGCAACCGCACGGGCAAGCTGATAACCGCACGAGAAACTCCATGAAG
AATGCGGGCAGCGCTGGGCGCGACCAGTTTCGCGAGGAGGCCAGTGGTCG
CCCTCAACGACTCGACGAAGACCAGGTCGGATCCAAGTCGTCATCTCGAA
ACAGGATCCCAAACAACCAATCCAGCATCCGCCGAGCATCCCATGATCCA
ACAAACAGCTCAGGGCAAGACACCGCAACAAAGGTCCCCAGTCTGTTGGC
GTGCCCCATGCCGGACGTTCACAGCGTAAGAATCGGAATCAAGGCGCCCT
CTACCAAGTGCAACCGCACGGGCAAGCTGATAACCGCACGAGAAACTCCA
TGAAGAATGCGGGCAGCGCTGGGCGCGACCAGTTTCGCGAGGAGGCCAGT
GGTCGCCCTCAACGACTCGACGAAGACCAGGTCGGATCCAAGTCGTCATC
TCGAAACAGGATCCCAAACAACCAATCCAGCATCCGCCGAGCATCCCATG
ATCCAACAAACAGCTCAGGGCAAGACACCGCAACAAAGGTCCCTTCCAGG
CGGCAAAAGATGTGTGTCGAACATGCTCAACAATCAACTGCGGATGCGCA
CCCGAAACCTACTGGAAATGCTGTCTTGAACGGGTCCGCGCCAGGTCTGT
CACCTATTCGGCCAGGTCCCTTCCAGGCGGCAAAAGATGTGTGTCGAACA
TGCTCAACAATCAACTGCGGATGCGCACCCGAAACCTACTGGAAATGCTG
TCTTGAACGGGTCCGCGCCAGGTCTGTCACCTATTCGGCCAGGCCAGGAG
ATACTAGCAAAAGCGGCGCCAGGTAGACTGCCTTCTCCCGCGAAGCAGGA
CGCGCCGCTTGCCGAGGATGTGTTGTCCGATCATGGCGAACCACCTTTCG
CACCTGGTGGTATTTCAAATCAGCCACCAGGGCAATGGGTGAGCAACAGC
GGCGAACGCGCTGCTCGGCAGGCCAGGAGATACTAGCAAAAGCGGCGCCA
GGTAGACTGCCTTCTCCCGCGAAGCAGGACGCGCCGCTTGCCGAGGATGT
GTTGTCCGATCATGGCGAACCACCTTTCGCACCTGGTGGTATTTCAAATC
AGCCACCAGGGCAATGGGTGAGCAACAGCGGCGAACGCGCTGCTCGGCAG
GCCAAATCCGGCGAAGATTCGGGAGGCCACTTACAACCGCACGTATGCAA
GGAGAAAGAGAAGGAGAAGGAAAAGCCCAAACCCAAGAAGAAGGAAGAGA
AGACTTACCGACCTGGATCCAAGATACTCTTGGGCCAAATCCGGCGAAGA
TTCGGGAGGCCACTTACAACCGCACGTATGCAAGGAGAAAGAGAAGGAGA
AGGAAAAGCCCAAACCCAAGAAGAAGGAAGAGAAGACTTACCGACCTGGA
TCCAAGATACTCTTGGGGACCACTGCCAAGGAACCTAGCAGATCGAGAGG
TGGTTCTCGCCCGAGCGTTGCACAGCGTCTGAGGGTGTTGAGCGGTGGCA
TACGCAGTTTTTTTTCCGGTCTAATTGGCGCGGTACTTCGAACGATCAGC
TGGCAGCTCGACAGGGACCACTGCCAAGGAACCTAGCAGATCGAGAGGTG
GTTCTCGCCCGAGCGTTGCACAGCGTCTGAGGGTGTTGAGCGGTGGCATA
CGCAGTTTTTTTTCCGGTCTAATTGGCGCGGTACTTCGAACGATCAGCTG
GCAGCTCGACAGGTTGCACCTGGTTGGGCGCTTTCTGGCCGTGCTTTCGT
TTGTAGCAGCTTCTGGGCCGTCCCTGTTGAGTGTGCTCGTCATGAGCATG
TCTTGGCTGTTTTTGCTTGGGCTTCGGGTTCATTCTCTTGCGCTGAAGGA
AGCGACGGGCAGCATTCACGTCGTGGTCTGCTTCCTCTTCCCATACTGCT
TCCAGTTGCACCTGGTTGGGCGCTTTCTGGCCGTGCTTTCGTTTGTAGCA
GCTTCTGGGCCGTCCCTGTTGAGTGTGCTCGTCATGAGCATGTCTTGGCT
GTTTTTGCTTGGGCTTCGGGTTCATTCTCTTGCGCTGAAGGAAGCGACGG
GCAGCATTCACGTCGTGGTCTGCTTCCTCTTCCCATACTGCTTCCAGTAC
TTGGTGTCGTTGATCGGCGAATGGGCGCCCCACTGGCTCCCCGCTTGCCT
GTGGTACAGCTTTCTGATGCAAATGTTCTGCACCTCCAACCACCAATATA
AGGTACTTGGTGTCGTTGATCGGCGAATGGGCGCCCCACTGGCTCCCCGC
TTGCCTGTGGTACAGCTTTCTGATGCAAATGTTCTGCACCTCCAACCACC
AATATAAGCACTCCATGTCTTCCCATCTGGTACCCGCTCTTCGAGCACTA
CTGCCAGTGGCTTTTCTCTGTGAGCACTCCATGTCTTCCCATCTGGTACC
CGCTCTTCGAGCACTACTGCCAGTGGCTTTTCTCTGTGAGGTGCCATCTG
GACGCAGCTACCTGTTGGCTCTTAATGGATCTGAACTGTTGCTGCTGTCT
TTCACACTGGCGGCAGTGAGGCTGCGCTGCCTTTTTAGCCCGATATTTCT
CCTGTCGTGGTCTTCACAGGCGAGTGCAGTGCCATCTGGACGCAGCTACC
TGTTGGCTCTTAATGGATCTGAACTGTTGCTGCTGTCTTTCACACTGGCG
GCAGTGAGGCTGCGCTGCCTTTTTAGCCCGATATTTCTCCTGTCGTGGTC
TTCACAGGCGAGTGCAGTATTCGCAATCGCGACGTGCGGTCCTTCCCCTT
CGCTTCAGTACGGCCAGCTGCTCGTATCTTTGGCGTCCCTTCATGCAGTG
TCCATGGTGGACGTAATGCTCAACAGCAGATATTACCACGCCAGGTATTC
GCAATCGCGACGTGCGGTCCTTCCCCTTCGCTTCAGTACGGCCAGCTGCT
CGTATCTTTGGCGTCCCTTCATGCAGTGTCCATGGTGGACGTAATGCTCA
ACAGCAGATATTACCACGCCAGGTACAGGGCTGGAATGAGCCTTACGAAC
GGGTTTCGGGCCATTTCCTCATCGCATACGCTGCTTCGATAGGTACAGGG
CTGGAATGAGCCTTACGAACGGGTTTCGGGCCATTTCCTCATCGCATACG
CTGCTTCGATAG
back to top