mRNA_M-pyrifera_M_contig7409.17542.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7409.17542.1 vs. uniprot
Match: D7FPX3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPX3_ECTSI) HSP 1 Score: 419 bits (1078), Expect = 2.160e-136 Identity = 243/549 (44.26%), Postives = 298/549 (54.28%), Query Frame = 1 Query: 34 GISITAGHDCLFEQSYPVLLNATMSRIMATAGVRFEAINVAMGNSRSSPYSFCVDAHAGIEADIVSWEMSLELTDFKCGPAAQAIELFVRSATVLPERPAVLVMDAMPDQDMCNQHRFNIVSRRNEGFMGHCGNKPDPEKDLMRVYRDFGLHQFYPSTLVPTYTCGDERFARSLLYGAGKHFPHPMSWHPAPAGHALVADMLFMHYAKIFLNALDRLQEAAPDWTVS---QFLELSTPSRESLGASLGLGGEGGDSAQASTGGVVAASDDRDNGR----LMGAGRGSVLPRPVWCKGWRFCEGAGNYRCANTYSPLAGKNGSRLVDMVSERTPVVNSKHGSILMQPRRGHWAVTLNEVKVPILEYLKTTPPEGMHHPIDMKWVLVGDATSGPIEFEFETIGVVPVG--------VAGGGDW-----------------GAGAAVETERSANGTAVADAPSVAATEGDPHVVVCRPDFIDRVELNDRGGVRYSVDGVETSTVGLVNQYGLHKGSCVVLAAEVGVGRHTLAVEPLKTGTPFVAISHVLYPA 1584 G+S TAGHDCLFEQSYPVLLN T R+MA GV+FEAINVAMGN+R +PYS+CV+AHAG+EAD++SW+M+L + +CG AA IELFVRSATVLP+RP VL+MDA P+QD+C + + ++G WH P GH LVADMLFM YA++FL AL+RL P T + Q LS R +L SLGL G G A+ G A+D + MG GRG +LP P WCKG+RFC+GAG+YR ++P +GHWAVTLNE I +YLK +PP G HHPID KWVLVGDA +GPIEFEFET+G+ P G V G + AGA E SA A P+ AT+ D V VC+PDFIDRV+ N+ GVR+SVDG++ T + Q GLH SC +L VGVGRHT+ VEPLK G P+VAISHVLYPA Sbjct: 228 GVSTTAGHDCLFEQSYPVLLNETFGRLMAATGVKFEAINVAMGNTRVAPYSYCVEAHAGLEADLISWDMTLMVASNECGKAAAGIELFVRSATVLPKRPVVLLMDATPNQDVCTNGHLRQIKKLDDG------------------------------------------------------------WHAGPTGHLLVADMLFMAYAEVFLRALERLNGVKPGITAAGLRQLNALSANGRLNLWESLGLDGGGATDARPDLHGEATAADSQSGSNNYPAFMGGGRGDILPPPSWCKGYRFCQGAGSYR-------------------------------SEYFVEPSQGHWAVTLNEEAQSIKDYLKVSPPRGFHHPIDYKWVLVGDAAAGPIEFEFETLGIPPAGRHRRRRAKVEEGEEEDAHTFSSSAGREEPAPESAGANEEFSNSAGIDAEKTRPTEDATDFDSRVTVCKPDFIDRVQFNETSGVRFSVDGIQVETTVELVQVGLHVQSCALLDVAVGVGRHTVKVEPLKVGEPYVAISHVLYPA 685
BLAST of mRNA_M-pyrifera_M_contig7409.17542.1 vs. uniprot
Match: A0A6H5JNP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP8_9PHAE) HSP 1 Score: 358 bits (920), Expect = 1.460e-114 Identity = 236/548 (43.07%), Postives = 287/548 (52.37%), Query Frame = 1 Query: 244 LELTDFKCGPAAQAIELFVRSATVLPERPAVLVMDAMPDQDMCNQHRFNIVSRRNEGFMGHCGNKPDPEKDLMRVYRDFGLHQFYPSTLVPTYTCGDERFARSLLYGAGKHFPHPMSWHPAPAGHALVADMLFMHYAKIFLNALDRLQEAAPDWTVSQFLELS------------------------TPSRESLGASLGLGGEGG-------DSAQASTGGVVAASDDRD---NGRLMGAGRG-SVLPRPVWCKGWRFCEGAGNYRCANTYSPLAGKNGSRLVDMVSERT---------------PV--VNSKHGSILMQPRRGHWAVTLNEVKVPILEYLKT-TPPEGMHHPIDMKWVLVGDATSGPIEFEFETIGV----------------------VPVGVAGGGDWGAGAAVETERSANG--------TAVA--------------DAPSVAATEG----DPHVVVCRPDFIDRVELNDRGGVRYSVDGVETSTVGLVNQYGLHKGSCVVLAAEVGVGRHTLAVEPLKTGTPFVAISHVLYPA 1584 +E+ C AA A+ELF+RS+ VLP RPA+LV+DA DQ + R ++ RN F+G+CG P+ +LM YRDFG+H + S+L+ Y GDERFA +LY AGKH+P PM WHPAPAGH LVADMLFMHY K+FL A+D L++A+P T ++ E T S ++L ++GL G+ D GG S R MG GRG VLP WC G C+GAGNYRCANTY PL G GSRL+DMV + PV N + P G WAVTLNEV P ++Y+ PEG H PID+KWVLVGDA SGPIEFEF T GV VA G GAA+ TAVA +A + AA G D VVVC+PDFIDRV+ D GGV +S+DGVETS V + GL SC +LAAEVG GRH L V PL+ G PFVAISHV+YPA Sbjct: 1 MEIATLACEKAAAAVELFIRSSLVLPRRPAILVLDAQADQGA--KGRLKLLKHRNRRFLGYCGG---PKPNLMDAYRDFGVHNIFASSLILEYAAGDERFAHEVLYAAGKHYPRPMKWHPAPAGHELVADMLFMHYGKLFLEAIDLLEQASPGLTAAELREKKEQQGQQPQQERSREHDGSGSSDHGTISMKALREAVGLAGDNPNVFVRRPDDKARRGGGEGEESPIRPPPTECSYMGGGRGRGVLPLAEWCSG-AHCQGAGNYRCANTYYPLEGNQGSRLLDMVVSDSDGEGEGGGENGDPGNPVGLFNRDEEKLRASPSEGRWAVTLNEVSRPAIDYMMNGRAPEGYHKPIDVKWVLVGDADSGPIEFEFFTGGVPLDKAIDKVTTRSEAXXXXXXXXXXXVATGVQGVEGAAIHXXXXXXXXXXXXXXXTAVAPVGGQVGVLPLGPVEAAAAAALAGTKVVDSRVVVCKPDFIDRVDFADPGGVVFSIDGVETSVVP-AEEDGLMTKSCSLLAAEVGPGRHRLKVVPLRRGEPFVAISHVIYPA 541
BLAST of mRNA_M-pyrifera_M_contig7409.17542.1 vs. uniprot
Match: D8LSB3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSB3_ECTSI) HSP 1 Score: 328 bits (841), Expect = 1.740e-104 Identity = 194/417 (46.52%), Postives = 245/417 (58.75%), Query Frame = 1 Query: 460 MRVYRDFGLHQFYPSTLVPTYTCGDERFARSLLYGAG-KHFPHPMSWHPAPAGHALVADMLFMHYAKIFLNALDRLQEAAPDWTVSQFLE-----------LSTPSRESLGASLGLGGEGGDSAQASTGGVVAASDDRDNGRLMGAGRGSVLPRPVWCKGWRFCEGAGNYRCANTYSPLAGKNGSRLVDMVSERTP-VVNSKHGSILMQPRRGHWAVTLNEVKVPILEYLKTTPPEGMHHPIDMKWVLVGDATSGPIEFEFETIGVVPVGVAG------------GGDWGAGAAVE----------------TERSANGTAVADA-PSVAATEGDPHVVVCRPDFIDRVELNDRGGVRYSVDGVETSTVGLVNQYGLHKGSCVVLAAEVGVGRHTLAVEPLKTGTPFVAISHVLYPA 1584 M VYR+FGLH+ PS+LVP TCG+E F LY A K P P SWH P GH LVADMLFMHYA++FL A+ RL++ AP T Q + +S+ RE+ + L S + + G VV A DD DN MG GRG +LP P WC GWRFC GAG+YRCANTY P A G+RLV MVS ++P ++N H ++ +P GHWA+TLNE +L+YLKT PPEG HHPID+K VLVGDA SG IEFEFETIGV P G G D A V+ E + + A+ D + + D VV+C+PDFI RV+ D V + VDGV L + + +GSCV+L +VGVGRHT++VEPL +G P+VA+SH+LYPA Sbjct: 1 MEVYREFGLHRMTPSSLVPENTCGNEVFDYHRLYNASLKDIPRPSSWHAGPPGHQLVADMLFMHYAEVFLKAVGRLEDVAPGVTARQLRDSGGEIIPGDAAVSSSERETRESIRDL-----TSLRETLGLVVEAVDDNDN-VYMGGGRGDILPPPAWCAGWRFCLGAGSYRCANTYFPQAAGKGARLVGMVSAKSPAILNLDHKEMIAEPTSGHWAMTLNEESERLLDYLKTFPPEGFHHPIDLKLVLVGDAASGAIEFEFETIGV-PAGTEGWLSEEXXXXXXXXXDDRAEELVDGNXXXXXXXXXXXDEKQEEAGSHRAMQDQLQQMNSMSQDSRVVICKPDFITRVDFTDSTQVTFRVDGVVAIAEELEQGF-MTQGSCVILETDVGVGRHTVSVEPLHSGAPYVAVSHLLYPA 409
BLAST of mRNA_M-pyrifera_M_contig7409.17542.1 vs. uniprot
Match: D7FUH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH4_ECTSI) HSP 1 Score: 299 bits (765), Expect = 4.140e-93 Identity = 171/381 (44.88%), Postives = 221/381 (58.01%), Query Frame = 1 Query: 103 MSRIMATAGVRFEAINVAMGNSRSSPYSFCVDAHAGIEADIVSWEMSLELTDFKCGPAAQAIELFVRSATVLPERPAVLVMDAMPDQDMCNQHRFNIVSRRNEGFMGHCGNKPDPEKDLMRVYRDFGLHQFYPSTLVPTYTCGDERFARSLLYGAGKHFPHPMSWHPAPAGHALVADMLFMHYAKIFLNALDRLQEAAPDWTVSQFLELST-----PSRESLGASLGLGGE--GGDSAQASTGGVVAASDD------RDNGR---------------------LMGAGRG-SVLPRPVWCKGWRFCEGAGNYRCANTYSPLAGKNGSRLVDMV---SERTPVVNSKHGS--------------ILMQPRRGHWAVTLNEVK 1089 M R+MA AGV + AINVAMGN+R++PYS+CVDAHAG++ADIVSW +E+ C AA A+ELFVRS+ VLP RPA+LV+DA DQ + R ++ RN F+G+C P+++LM YRDFG+H + S+L+ + GDERFA +LY AGKH+P PM WHPAPAGH LVADMLFMHY K+FL A+D L++A+P T ++ + + P +E + G G G S +A V A D+ R +G+ M GRG VLP WC G C+GAGNYRCANTY PL G GSRL+DMV S+ ++G + P G WAVTLNEVK Sbjct: 1 MGRLMAAAGVGYTAINVAMGNTRAAPYSYCVDAHAGLDADIVSWSFGMEIATLPCEEAAAAVELFVRSSLVLPRRPAILVLDAQADQGA--KGRLELLKHRNRRFLGYCNG---PKRNLMEAYRDFGVHNIFASSLILEHAAGDERFAHEILYAAGKHYPRPMKWHPAPAGHELVADMLFMHYGKLFLEAIDLLEQASPGLTAAELRDKNEQPGQQPQQEGSRENDGRGSSDHGTISMEALREAVGLARDNPNVFVRRPDGKPRRGGGEGEEPPIRPPPTECSYMAGGRGRGVLPPAEWCSG-AHCQGAGNYRCANTYYPLEGNQGSRLLDMVVSDSDGEGEGGGENGDPGNPVGLFSRDEEKLRASPSEGRWAVTLNEVK 375
BLAST of mRNA_M-pyrifera_M_contig7409.17542.1 vs. uniprot
Match: A0A835YN73_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN73_9STRA) HSP 1 Score: 201 bits (511), Expect = 5.070e-55 Identity = 130/405 (32.10%), Postives = 189/405 (46.67%), Query Frame = 1 Query: 34 GISITAGHDCLFEQSYPVLLNATMSRIMATAGVRFEAINVAMGNSRSSPYSFCVDAHAGIEADIVSWEMSLELTDFKCGPAAQAIELFVRSATVLPERPAVLVMDAMPDQDMCNQHRFN--IVSRRNEGFMGHC----GNKPDPEKDLMRVYRDFGLHQFYPSTLVPTYTCGDERFARSLLYGAGKHFPHPMSWHPAPAGHALVADMLFMHYAKIFLNALDRLQEAAPDWTVSQFLELSTPSRESLGASLGLGGEGGDSAQASTGGVVAASDDRDNGRLMGAGRGSVLPRPVW-----CKGWRF---CEGAGNYRCANTYSPLAGKNGSRLVDMVSERTPVVNSKHGSILMQPRRGHWAVTLNEVKVPILEYLKTTPPEGMHHPIDMKWVLVGDATSGPIEFEFE 1206 GIS TAGHD LF QSYP++L + ++ AGV +N AMGN+ PYS+CV+AHAG D+VSWEMS+++ + C A+ +E ++R+A LP RP L+++ D+ C + R +S E +G C + + DLM Y+D+G+H TL+ +TCG F + LYG P SWHP P H L+A++L +Y + AL L AAP T+ EL R ++ L +P+ +W C RF C +G+YRC TY P ++ S +D +N K + W V +NE I + P P+D KWVL G A++GP+ F+FE Sbjct: 36 GISNTAGHDNLFAQSYPMVLERLLKPVLQLAGVELRVLNGAMGNTDFLPYSYCVEAHAGAHPDVVSWEMSMQIGNTPCTRTAELVETWIRTALALPSRPVPLLLNCQADRGRCARDREAPPTLSHTMEKAVGRCVGAERTRGTLQHDLMSWYKDYGIHSLNLETLMAAHTCGYPAFEKKRLYGGKVGTPRTKSWHPGPGAHRLMAEVLAANYLGLLRGALSELDAAAPGVTLQ---ELQARERRLRQCAVHL-----------------------------------VPQ-LWQSHAPCCHRRFVLLCARSGSYRCLTTYYP--NQDASTQLDRYVTDNTTLNRKPHFKYLPTNTSEWQVIVNEPMRGITGFQFDNP----QWPVDRKWVLAGAASAGPLNFKFE 395
BLAST of mRNA_M-pyrifera_M_contig7409.17542.1 vs. uniprot
Match: B8BXM6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXM6_THAPS) HSP 1 Score: 81.3 bits (199), Expect = 1.680e-12 Identity = 56/215 (26.05%), Postives = 93/215 (43.26%), Query Frame = 1 Query: 34 GISITAGHDCLFEQSYPVLLNATMSRIMATAGVRFEAINVAMGNSRSSPYSFCVDAHAGIEADIVSWEMSLELTDFKCGPAAQAIELFVRSATVLPERPAVLVMDAMPDQDMCNQHRFNIVSRRNEGFMGHCGNKPDPEKDLMRVYRDFGLHQFYPSTLVPTYTCGDERFARSLLYGAGKHFPHPMSWHPAPAGHALVADMLFMHYAKIFLNALD 678 G S+TAG F QSYP +L +++ M G+ + N A+G S PY +C++ G +AD+VSW+ S+ + G A +E ++R + ++P ++V D +I R E + + + ++ + ++PT F +GA K P S HP H L+ +L MH FL AL+ Sbjct: 190 GYSVTAGRGNYFHQSYPFVLERLITQPMKLLGIELQVRNAAIGGVPSFPYGWCLNNFLGEDADVVSWDFSMN----EAGGVADGLEAYLRHTIAMKKQPMLIVKDTSA----------SIAGERRELLQNYVDDGTIKDPIVLSIEDAMQSFLSLSEDILPT------GFHEWRKFGAPKESPGQTSHHPGVKEHELIGWLLAMH----FLAALE 380
BLAST of mRNA_M-pyrifera_M_contig7409.17542.1 vs. uniprot
Match: A0A1Z5JAJ8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAJ8_FISSO) HSP 1 Score: 79.3 bits (194), Expect = 6.910e-12 Identity = 58/223 (26.01%), Postives = 94/223 (42.15%), Query Frame = 1 Query: 34 GISITAGHDCLFEQSYPVLLNATMSRIMATAGVRFEAINVAMGNSRSSPYSFCVDAHAGIEADIVSWEMSLELTDFKCGPAAQAIELFVRSATVLPERPAVLVMD---AMPDQDMCNQHRFNIVSRRNEGFMGHCGNKPDPEKDLMRVYRDFGLHQFYPSTLVPTYTCGDERFARSLLYGAGKHFPHPMSWHPAPAGHALVADMLFMHYAKIFLNALDRLQEA 693 G S+TAG LF QSYP + + + GV + N A+G S PY +C+ G +AD+VSW+ S+ + G +E ++R +P RP ++V D A +++ ++ + +V + + H P + YR G ++ +G+ P HPA H +A +L MH FL AL+ L A Sbjct: 184 GYSVTAGRGNLFSQSYPFQMEHILHTLFQLQGVELKVRNAAIGGCPSFPYGWCLPNFLGSDADVVSWDFSMN----EAGGDPSGLEAYIRHLLQMPHRPKLIVKDTHMATERRNLLQKYSYLMV----DAIVMHTDPAARPFLNRKEEYRPPGFQEW-------------------RKFGSPPGAPGQALHHPAVQEHTFIAWILAMH----FLEALELLAAA 375
BLAST of mRNA_M-pyrifera_M_contig7409.17542.1 vs. uniprot
Match: A0A836CGX8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGX8_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.770e-10 Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 1 Query: 34 GISITAGHDCLFEQSYPVLLNATMSRIMATAGVRFEAINVAMGNSRSSPYSFCVDAHAGIEADI 225 G S+TAGHD L QSYP+ + M+ I +GV F A N AMGN+ PY +C++AH GI+ DI Sbjct: 28 GTSVTAGHDNLESQSYPMQFESIMAPIFEHSGVNFTATNSAMGNNDIVPYLWCLEAHVGIDPDI 91
BLAST of mRNA_M-pyrifera_M_contig7409.17542.1 vs. uniprot
Match: A0A6H5JJ65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ65_9PHAE) HSP 1 Score: 65.9 bits (159), Expect = 3.350e-10 Identity = 28/41 (68.29%), Postives = 36/41 (87.80%), Query Frame = 1 Query: 112 IMATAGVRFEAINVAMGNSRSSPYSFCVDAHAGIEADIVSW 234 +M A V + AINVAMGN+R++PYS+CVDAHAG++ADIVSW Sbjct: 8 VMPVAEVTYTAINVAMGNTRAAPYSYCVDAHAGLDADIVSW 48
BLAST of mRNA_M-pyrifera_M_contig7409.17542.1 vs. uniprot
Match: A0A7S1BW83_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BW83_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.760e-9 Identity = 57/215 (26.51%), Postives = 87/215 (40.47%), Query Frame = 1 Query: 31 AGISITAGHDCLFEQSYPVLLNATMSRIM------ATAGVRFEAINVAMGNSRSSPYSFCVDAHAGIEADIVSWEMSLELTDFKCGPAAQAIELFVRSATVLPERPAVLVMDAMPDQDMCNQHRFNIVSRRNEGFMGHCGNKPDPEKDLMRVYRDFGLHQFYPSTLVPTYTCGDER---FARSLLYGAGKHFPHPMSWHPAPAGHALVADMLFMH 648 AG S T G F QSYP + + M T +F N +G S PY +C++ G +AD+VSWE +L + G +E +VR + +P P ++V D+ + R ++ + + K + +D + VY D F +ER F +GA P + WHP HAL M+ MH Sbjct: 134 AGYSTTVGRGNYFNQSYPFVAERILREPMLELLGDGTNSGKFIVRNAGIGGIPSFPYGWCLENFLGSDADVVSWEFTLN----EAGGIPGGLEAYVRHVSSMPNVPKLIVKDSPKARG-----RLEVLRKYS---------KKNVLRDAVAVYSDLAAEDFVSMKK-------EERPPGFKNWEEFGAPPGSPGQVKWHPTHQEHALYGWMIAMH 323 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7409.17542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7409.17542.1 >prot_M-pyrifera_M_contig7409.17542.1 ID=prot_M-pyrifera_M_contig7409.17542.1|Name=mRNA_M-pyrifera_M_contig7409.17542.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=529bp MVYTCFCGICAGISITAGHDCLFEQSYPVLLNATMSRIMATAGVRFEAINback to top mRNA from alignment at M-pyrifera_M_contig7409:5699..11456- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7409.17542.1 ID=mRNA_M-pyrifera_M_contig7409.17542.1|Name=mRNA_M-pyrifera_M_contig7409.17542.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5758bp|location=Sequence derived from alignment at M-pyrifera_M_contig7409:5699..11456- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7409:5699..11456- >mRNA_M-pyrifera_M_contig7409.17542.1 ID=mRNA_M-pyrifera_M_contig7409.17542.1|Name=mRNA_M-pyrifera_M_contig7409.17542.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3174bp|location=Sequence derived from alignment at M-pyrifera_M_contig7409:5699..11456- (Macrocystis pyrifera P11B4 male)back to top |