mRNA_M-pyrifera_M_contig74059.17534.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig74059.17534.1 vs. uniprot
Match: A0A812IIB8_9DINO (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812IIB8_9DINO) HSP 1 Score: 120 bits (300), Expect = 7.270e-31 Identity = 69/143 (48.25%), Postives = 93/143 (65.03%), Query Frame = 1 Query: 10 LSVASRVWMVLCVCWYSEESRQNPFYALMVMSWGLVEVPRYLFLLVNLLSPNNVPYPLLWLRYSLFAILYPTGISGEVGCSIYSLWTYLFTSANPPPLTLLLPNQFNLLY-HHGLVIVGILVAYIPLSPVMYSHMVKQRAKKL 435 L V SR+ ++ V ++ ++ P + LM SW VEVPRYLFLL+NL N VPYPLLWLRYSLF +LYPTGISGEV +S+W+ L L++ LPN +N+L+ +HG + +L Y P S M+ HM++QR KKL Sbjct: 84 LQVLSRLIVLWGVTHFAPAAQTGPCFTLMAASWSAVEVPRYLFLLLNLW--NAVPYPLLWLRYSLFMVLYPTGISGEV----WSIWSALPFIKATGTLSVALPNAYNMLFDYHGFLWFTLLAIYPPGSVHMFGHMLRQRTKKL 220
BLAST of mRNA_M-pyrifera_M_contig74059.17534.1 vs. uniprot
Match: A0A7S3HHK7_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHK7_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.390e-29 Identity = 67/144 (46.53%), Postives = 90/144 (62.50%), Query Frame = 1 Query: 7 FLSVASRVWMVLCVCWYSEESRQNPFYALMVMSWGLVEVPRYLFLLVNLLSPNNVPYPLLWLRYSLFAILYPTGISGEVGCSIYSLWTYLFTSANPPPLTLLLPNQFNLLYH--HGLVIVGILVAYIPLSPVMYSHMVKQRAKK 432 F+ V SRVW + + ++ ++ F+ L SWGLVEVPRYLF +NLL N VPYPL WLRYSLFA+LYPTGI+GE+G ++Y + + T A P Q L+ H + IV + + YIP SP M+ HMVK R+K+ Sbjct: 75 FMQVFSRVWTLWAIMDTTDAAQTTVFFVLACTSWGLVEVPRYLFYALNLL--NAVPYPLFWLRYSLFAVLYPTGITGELG-TMYHAFNFFITQA---------PIQDQPLFRQIHLVSIVLVAITYIPGSPKMFGHMVKTRSKQ 206
BLAST of mRNA_M-pyrifera_M_contig74059.17534.1 vs. uniprot
Match: A0A482RN91_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RN91_9ARCH) HSP 1 Score: 108 bits (271), Expect = 5.880e-27 Identity = 67/156 (42.95%), Postives = 90/156 (57.69%), Query Frame = 1 Query: 10 LSVASRVWMVLCVCWYSEESRQNPFYALMVMSWGLVEVPRYLFLLVNLLSPNNVPYPLLWLRYSLFAILYPTGISGEVGC---SIYSLWTYLFTSANPPPLTLLLPNQFNLLYHHGLVIVGILVAYIPLSPVMYSHMVKQRAKK---LGTGAKKAQ 459 + V SRVW + V + ++ + F+ L SW LVEVPRYLF +++ N VPYPL WLRYSLFAILYPTGI+GE+GC S++ LW ++ P L+L L ++V Y+P SP MY HM+K R K+ L G KK + Sbjct: 49 MQVFSRVWTLWAVMDMAPTAQHSLFFLLACTSWALVEVPRYLFYALSI--ANAVPYPLFWLRYSLFAILYPTGITGELGCMYLSLFELWGKAGGVSDVPMDKLVLMVLIAL----------VVVTYVPGSPTMYKHMLKTRKKQFQELKEGGKKRE 192
BLAST of mRNA_M-pyrifera_M_contig74059.17534.1 vs. uniprot
Match: A0A1V9YMC0_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMC0_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.830e-26 Identity = 66/143 (46.15%), Postives = 91/143 (63.64%), Query Frame = 1 Query: 1 SFFLSVASRVWMVLCVCWYSEESRQNPFYALMVMSWGLVEVPRYLFLLVNLLSPNNVPYPLLWLRYSLFAILYPTGISGEVGCSIYSLWTYLFTSANPPPLTLLLPNQFNLLYHHGLVIVGILVAYIPLSPVMYSHMVKQRAK 429 S F+ V+SR+W+V + ESR + + LMVMSWGLVEVPRY F +NLL + VP L +LRY LF +LYP+G++GEV C I SL L + A ++ +PN N+ ++++ I+V YIP P+MYSHM QR K Sbjct: 75 STFMQVSSRLWLVWAINVLCPESRTHWGFVLMVMSWGLVEVPRYAFYALNLL--DAVPNWLFFLRYHLFMVLYPSGVTGEVTCMIKSL-PLLASGAY----SITMPNTHNIAVSLYVIVLIIMVIYIPGLPIMYSHMNVQRKK 210
BLAST of mRNA_M-pyrifera_M_contig74059.17534.1 vs. uniprot
Match: A0A7S0LUZ0_9EUKA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LUZ0_9EUKA) HSP 1 Score: 100 bits (250), Expect = 1.020e-24 Identity = 59/117 (50.43%), Postives = 75/117 (64.10%), Query Frame = 1 Query: 82 FYALMVMSWGLVEVPRYLFLLVNLLSPNNVPYPLLWLRYSLFAILYPTGISGEVGCSIYSLWTYLFTSANPPPLTLLLPNQFNLLYHHGLVIVGILVAYIPLSPVMYSHMVKQRAKK 432 F++L SWGLVEVPRYLF +NLL N VPYPL WLRYSLFA+LYPTGI+GE+GC +L Y T + + P + + H I+ + + YIP SP M+ HMVK R K+ Sbjct: 1 FFSLACTSWGLVEVPRYLFYALNLL--NAVPYPLFWLRYSLFAVLYPTGITGELGCMFQALM-YFMTRVH----FMEQPLERQI---HIASIIFVALTYIPGSPKMFFHMVKTRQKQ 107
BLAST of mRNA_M-pyrifera_M_contig74059.17534.1 vs. uniprot
Match: A0A1V9YY62_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YY62_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.640e-24 Identity = 65/144 (45.14%), Postives = 93/144 (64.58%), Query Frame = 1 Query: 1 SFFLSVASRVWMVLCVCWYSEESRQNPFYALMVMSWGLVEVPRYLFLLVNLLSPNNVPYPLLWLRYSLFAILYPTGISGEVGCSIYSLWTYLFTSANPPPLTLLLPNQFNLLYHHGLVIVGILVAYIPLSPVMYSHMVKQRAKK 432 S F+ V+SR+W+V + ESR + + LMV+SWG+VEVPRY F +NLL + VP L +LRY LF +LYP+G++GEV C I +L YL T A ++ +PN N+ +V++ +LV YIP P+MYSHM QR ++ Sbjct: 585 STFMQVSSRLWLVWAINVLCPESRTHWGFILMVVSWGMVEVPRYSFYALNLL--DAVPDWLFFLRYHLFMVLYPSGVTGEVTCMIKAL-PYLATGAY----SITMPNPHNIAVSLFVVVLIVLVIYIPGLPIMYSHMNVQRKRE 721
BLAST of mRNA_M-pyrifera_M_contig74059.17534.1 vs. uniprot
Match: A0A067CBA8_SAPPC (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CBA8_SAPPC) HSP 1 Score: 102 bits (254), Expect = 4.420e-24 Identity = 62/143 (43.36%), Postives = 89/143 (62.24%), Query Frame = 1 Query: 1 SFFLSVASRVWMVLCVCWYSEESRQNPFYALMVMSWGLVEVPRYLFLLVNLLSPNNVPYPLLWLRYSLFAILYPTGISGEVGCSIYSLWTYLFTSANPPPLTLLLPNQFNLLYHHGLVIVGILVAYIPLSPVMYSHMVKQRAK 429 S F+ V+SR+W+V + ESR + + LMV SWGLVEVPRY F +NLL + VP L +LRY LF +LYP+G++GEV C + +L L T A ++ +PN N+ ++++ LV Y+P PVMY+HM QR + Sbjct: 75 STFMQVSSRLWLVWAINVLCPESRTHWGFVLMVASWGLVEVPRYAFYALNLL--DAVPDWLFFLRYHLFMVLYPSGVTGEVTCMLKAL-PLLSTGAY----SITMPNTHNIAVSLYVIVLLTLVVYVPGLPVMYTHMNVQRKR 210
BLAST of mRNA_M-pyrifera_M_contig74059.17534.1 vs. uniprot
Match: A0A5D6YFT2_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFT2_9STRA) HSP 1 Score: 101 bits (252), Expect = 9.370e-24 Identity = 61/138 (44.20%), Postives = 86/138 (62.32%), Query Frame = 1 Query: 10 LSVASRVWMVLCVCWYSEESRQNPFYALMVMSWGLVEVPRYLFLLVNLLSPNNVPYPLLWLRYSLFAILYPTGISGEVGCSIYSLWTYLFTSANPPPLTLLLPNQFNLLYHHGLVIVGILVAYIPLSPVMYSHMVKQR 423 + V+SR+W+V + +SR + LMV+SWGLVEVPRY F +NL N VP L +LRY LF +LYP+G+ GEV C + SL +L++ A ++ LPN N+ + + +L+ YIP PVMYSHM+ QR Sbjct: 87 MQVSSRLWLVWGINVLCPDSRYQFGFPLMVLSWGLVEVPRYSFYALNLF--NKVPAFLTFLRYHLFMVLYPSGVLGEVLCMLSSL-DFLYSGAY----SIQLPNAHNVAASLYVFVTLVLIMYIPGLPVMYSHMLTQR 217
BLAST of mRNA_M-pyrifera_M_contig74059.17534.1 vs. uniprot
Match: A0A7M7GBU7_APIME (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=4 Tax=Apis TaxID=7459 RepID=A0A7M7GBU7_APIME) HSP 1 Score: 100 bits (250), Expect = 1.900e-23 Identity = 57/150 (38.00%), Postives = 94/150 (62.67%), Query Frame = 1 Query: 10 LSVASRVWMVLCVCWYSEESRQNPFYAL--MVMSWGLVEVPRYLFLLVNLLSPNNVPYPLLWLRYSLFAILYPTGISGEVGCSIYSLWTYLFTSANPPPLTLLLPNQFNLLYHHGLVIVGILVAYIPLSPVMYSHMVKQRAKKLGTGAKK 453 + V SRV++V CV + + +AL M+++W + E+ RY+F +NL N PY + WLRY+LF ILYP G+SGE+ C+ YS Y T+++P + LPN +N ++ + ++++ ++++YIP P Y HM+ QR K +G+ A K Sbjct: 81 IQVLSRVFVVSCVILATPYNYAASSFALPMMILAWCISEINRYIFYGLNLFGLN--PYFVKWLRYTLFYILYPIGVSGELICT-YSAVKY--TNSHPEAWSYRLPNSWNFIFSYQILLITVMLSYIPFFPQTYMHMIAQRRKNVGSDALK 225
BLAST of mRNA_M-pyrifera_M_contig74059.17534.1 vs. uniprot
Match: A0A0G4IRI2_PLABS (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IRI2_PLABS) HSP 1 Score: 100 bits (250), Expect = 2.730e-23 Identity = 56/143 (39.16%), Postives = 87/143 (60.84%), Query Frame = 1 Query: 10 LSVASRVWMVLCVCWYSEESRQNPFYALMVMSWGLVEVPRYLFLLVNLLSPNNVPYPLLWLRYSLFAILYPTGISGEVGCSIYSLWTYLFTSANPPPLTLLLPNQFNLLYHHGLVIVGILVAYIPLSPVMYSHMVKQRAKKLG 438 L VASR++++ V + + + A++V +W VE+PRY + +NL + VPYPLLWLRYSLF +LYP GIS E+ C+ +++ + T ++L+PN N ++I +++ Y+P SP +Y HMV QR K LG Sbjct: 88 LQVASRLFILFTVVEQVPAIQDDWYVAMLVGAWACVEIPRYAYYALNLF--DAVPYPLLWLRYSLFIVLYPIGISAELLCAYHAIPHFAATKQ----WSVLMPNMVNFELKFDVLIKMLMLVYVPGSPFLYLHMVHQRKKYLG 224 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74059.17534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig74059.17534.1 >prot_M-pyrifera_M_contig74059.17534.1 ID=prot_M-pyrifera_M_contig74059.17534.1|Name=mRNA_M-pyrifera_M_contig74059.17534.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=154bp SFFLSVASRVWMVLCVCWYSEESRQNPFYALMVMSWGLVEVPRYLFLLVNback to top mRNA from alignment at M-pyrifera_M_contig74059:575..1036- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig74059.17534.1 ID=mRNA_M-pyrifera_M_contig74059.17534.1|Name=mRNA_M-pyrifera_M_contig74059.17534.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=462bp|location=Sequence derived from alignment at M-pyrifera_M_contig74059:575..1036- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig74059:575..1036- >mRNA_M-pyrifera_M_contig74059.17534.1 ID=mRNA_M-pyrifera_M_contig74059.17534.1|Name=mRNA_M-pyrifera_M_contig74059.17534.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=924bp|location=Sequence derived from alignment at M-pyrifera_M_contig74059:575..1036- (Macrocystis pyrifera P11B4 male)back to top |