mRNA_M-pyrifera_M_contig74029.17533.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig74029.17533.1 vs. uniprot
Match: D8LK66_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK66_ECTSI) HSP 1 Score: 174 bits (441), Expect = 1.870e-51 Identity = 79/102 (77.45%), Postives = 93/102 (91.18%), Query Frame = 1 Query: 1 WLALSPLLGAYTKTATATAGDAAKSLVPAWGVSIPFAIFLRALSKGGEVPPLPFAVTTMVFTFVALLGWREVYTAFNPTGEGDKQAGIMDGFRMITTLLQRW 306 WLA+SPLLGAYT++AT T G AAK+L+PAWG+SIP IFLRALSKGGEVPP+PFAVT+M+FT AL+ WR++YTA NPTGEGDKQAG++DGFRMITTLLQRW Sbjct: 261 WLAVSPLLGAYTRSATETPGGAAKALLPAWGISIPVGIFLRALSKGGEVPPVPFAVTSMIFTLAALMAWRQLYTAVNPTGEGDKQAGLLDGFRMITTLLQRW 362
BLAST of mRNA_M-pyrifera_M_contig74029.17533.1 vs. uniprot
Match: A0A835ZDH1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH1_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.720e-29 Identity = 57/103 (55.34%), Postives = 71/103 (68.93%), Query Frame = 1 Query: 1 WLALSPLLGAYTKTATATAGDAAKSLVPAWGVSIPFAIFLRALSKGGEVPPLPFAVTTMVFTFVALLGWREVYTAFNPTGEGD-KQAGIMDGFRMITTLLQRW 306 WL LSPLLGAYT ATAT D +LVPAW VSIP A+ +R KG +VPP+PF + +++ T L WR +Y NPT + K+ GI+DGFRMITTLL+RW Sbjct: 171 WLGLSPLLGAYTNQATATQKDMISTLVPAWAVSIPVALAIRGAVKG-DVPPVPFIIVSLIATGSLLAAWRGLYVVINPTSTAETKRGGILDGFRMITTLLRRW 272
BLAST of mRNA_M-pyrifera_M_contig74029.17533.1 vs. uniprot
Match: A0A7S2UZN6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZN6_9STRA) HSP 1 Score: 108 bits (270), Expect = 9.810e-27 Identity = 55/105 (52.38%), Postives = 68/105 (64.76%), Query Frame = 1 Query: 1 WLALSPLLGAYTKTATATAGDAAKSLVPAWGVSIPFAIFLRALSKGGEVPPLPFAVTTMVFTFVALLGWREVYTAFNPTGEGDKQ---AGIMDGFRMITTLLQRW 306 WL L+PL GAYT+ A G +AKS+ AW SIP IF RAL+KGGE+PP F +M T V LL WR ++ N G DK+ GI+DGFRMITTL++RW Sbjct: 179 WLLLAPLAGAYTRQAVTDQGSSAKSVAVAWVASIPAGIFARALTKGGEIPPTSFIAVSMTATLVLLLTWRAIFVKVN--GSPDKEFRDGGIIDGFRMITTLIKRW 281
BLAST of mRNA_M-pyrifera_M_contig74029.17533.1 vs. uniprot
Match: R7QL50_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL50_CHOCR) HSP 1 Score: 92.8 bits (229), Expect = 7.000e-20 Identity = 48/104 (46.15%), Postives = 65/104 (62.50%), Query Frame = 1 Query: 1 WLALSPLLGAYTKTATATAGDAAKSLVPAWGVSIPFAIFLRALSKGGEVPPLPFAVTTMVFTFVALLGWREVYTAF--NPTGEGDKQAGIMDGFRMITTLLQRW 306 WLA SPLLGAYT+ ATA K+ +W +++P I LR + VPP FAV T+V TF + GWR +YT + T E ++ GI+DGF M++TLL+RW Sbjct: 405 WLATSPLLGAYTRAATANVAATVKTFAKSWAIAVPMGIGLRGVLTD-HVPPAVFAVVTLVSTFAIVGGWRVLYTKIRGDETDEA-RRGGILDGFNMVSTLLRRW 506
BLAST of mRNA_M-pyrifera_M_contig74029.17533.1 vs. uniprot
Match: A0A1X6P744_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P744_PORUM) HSP 1 Score: 82.4 bits (202), Expect = 3.000e-16 Identity = 47/104 (45.19%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 1 WLALSPLLGAYTKTATATAGDAAKSLVPAWGVSIPFAIFLRALSKGGEVPPLPFAVTTMVFTFVALLGWREVYTAFN--PTGEGDKQAGIMDGFRMITTLLQRW 306 WLA++PL+GAYT+ A T AA + AW V +P + LR + +PP FAV T++ T V L WR Y EG K+ G++DGFRMITTLL+RW Sbjct: 337 WLAVAPLMGAYTRRAVGTYQGAAVTTARAWLVGVPSGLALRGVVTS-HLPPPSFAVVTLLSTAVLLGVWRGSYVKLRGAEVAEG-KRGGVLDGFRMITTLLRRW 438
BLAST of mRNA_M-pyrifera_M_contig74029.17533.1 vs. uniprot
Match: A0A2V3IEJ3_9FLOR (Adenylate kinase, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEJ3_9FLOR) HSP 1 Score: 80.9 bits (198), Expect = 1.130e-15 Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 1 WLALSPLLGAYTKTATATAGDAAKSLVPAWGVSIPFAIFLRALSKGGEVPPLPFAVTTMVFTFVALLGWREVYTAFN-PTGEGDKQAGIMDGFRMITTLLQRW 306 WL SPLLGAYT+ ATA K V AW V++P I LR + VPP+ FAV ++V T + + WR +Y + ++ G+++ F+M+TTLL+RW Sbjct: 368 WLISSPLLGAYTRAATANIPATLKYFVRAWAVAVPMGIGLRGVVTD-HVPPVVFAVISLVATLLLMGSWRTLYVLIRGDETDSARRGGVVETFKMVTTLLRRW 469
BLAST of mRNA_M-pyrifera_M_contig74029.17533.1 vs. uniprot
Match: A0A5J4YRR5_PORPP (Adenylate kinase 8 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRR5_PORPP) HSP 1 Score: 67.4 bits (163), Expect = 6.720e-11 Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 1 WLALSPLLGAYTKTATATAGDAAKSLVPAWGVSIPFAIFLRALSKGGEVPPLPFAVTTMVFTFVALLGWREVYTAFNPTGEG--DKQAGIMDGFRMITTLLQR 303 W+ SP+LGAYT AT++ + + V++P + +R L VPP FA M+ + L WR Y + T + +K+ G++DGF+MITTLL+R Sbjct: 643 WVLGSPVLGAYTAAATSSQSAVLACVARSALVALPLGLAIRGLETS-HVPPPSFAGIAMITNLILLSAWRSAYISVAGTSDPGPEKRGGLLDGFKMITTLLRR 744 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74029.17533.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig74029.17533.1 >prot_M-pyrifera_M_contig74029.17533.1 ID=prot_M-pyrifera_M_contig74029.17533.1|Name=mRNA_M-pyrifera_M_contig74029.17533.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp WLALSPLLGAYTKTATATAGDAAKSLVPAWGVSIPFAIFLRALSKGGEVPback to top mRNA from alignment at M-pyrifera_M_contig74029:645..953- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig74029.17533.1 ID=mRNA_M-pyrifera_M_contig74029.17533.1|Name=mRNA_M-pyrifera_M_contig74029.17533.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=309bp|location=Sequence derived from alignment at M-pyrifera_M_contig74029:645..953- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig74029:645..953- >mRNA_M-pyrifera_M_contig74029.17533.1 ID=mRNA_M-pyrifera_M_contig74029.17533.1|Name=mRNA_M-pyrifera_M_contig74029.17533.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig74029:645..953- (Macrocystis pyrifera P11B4 male)back to top |