mRNA_M-pyrifera_M_contig74012.17529.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74012.17529.1
Unique NamemRNA_M-pyrifera_M_contig74012.17529.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig74012.17529.1 vs. uniprot
Match: A0A7S4IFA4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IFA4_9EUKA)

HSP 1 Score: 275 bits (703), Expect = 5.410e-85
Identity = 145/292 (49.66%), Postives = 188/292 (64.38%), Query Frame = 1
Query:    4 EVRIGQKTPIFAKNPLPEYEQFSFSLIYTAAGLERSHDIVCKDQPEFDRWTHGLQYLVEAKGQVDMHNIERRLENRETVESEKLSVSFKGTQTIVNKREAQRAPILSPLYSLYLCSPHTPTMLSLPLLSLTDTVVDSSDVYAWGQGVNGRLGHGDEKDQLQPKVIEALLGKDVRAIACGLSHTAALNAAGELYTWGAGSSGSLGHGHPRDRFTPLLVNSLTSKKVLQVACGDLHTAALVDNGGMYTWGEGAQGRLGHGSEE-SQTSPTQVEALHTERVVFIACGYVSTAAVT 876
            E+R+GQKT +F KNPLPEYE FSFSLIY     +R+ DIVCKD+ EF+ W  GL+ L   + ++D   ++R       V+ ++L +SFKG+QTIV+KRE                                    DSSDVY WG GV+GRLGHGDEKD + PKV+++LLGK++RA++CG SHTAALNA+GEL+TWGAGS G LG G  R RFTP ++ SL    + QVACGD HT A+ D G +YTWG+G  GRLGHG    +  SP  VE    +RV+F+ CGYV++AA+T
Sbjct:   67 EIRLGQKTAVFQKNPLPEYEPFSFSLIYD----DRTLDIVCKDKLEFNIWVTGLRSLTVDQVELDTEKLQRA-----AVQGDRLQISFKGSQTIVSKRE------------------------------------DSSDVYTWGHGVSGRLGHGDEKDHVVPKVVQSLLGKEIRAVSCGPSHTAALNASGELFTWGAGSFGRLGQGQDRHRFTPTIIPSLKGIIITQVACGDFHTGAITDTGKLYTWGKGDDGRLGHGDMSLAYLSPKLVEFFDGQRVIFLDCGYVTSAAIT 313          
BLAST of mRNA_M-pyrifera_M_contig74012.17529.1 vs. uniprot
Match: A0A0D2WGS2_CAPO3 (PH domain-containing protein n=3 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WGS2_CAPO3)

HSP 1 Score: 206 bits (523), Expect = 4.300e-59
Identity = 124/285 (43.51%), Postives = 164/285 (57.54%), Query Frame = 1
Query:    1 SEVRIGQKTPIFAKNPLPEYEQFSFSLIYTAAGLERSHDIVCKDQPEFDRWTHGLQYLVE-AKGQVDMHNIERRLENRETVESEKLSVSFKGTQTIVNKREAQRAPILSPLYSLYLCSPHTPTMLSLPLLSLTDTVVDSSDVYAWGQGVNGRLGHGDEKDQLQPKVIEALLGKDVRAIACGLSHTAALNAAGELYTWGAGSSGSLGHGHPRDRFTPLLVNSLTSKKVLQVACGDLHTAALVDNGGMYTWGEGAQGRLGHGSEESQTSPTQVEALHTERVVFIACG 852
            SEV  GQ+T +F  N +PE+E+ SFS++Y      R+ DI+CKD+ E D W  GLQ LV  A G +D+  +  R    ET   +KL V      T V  RE   A   SPL S     PH   +L++ L +   T VD+SDVY WG+G  G LGHG+E  +  P+V+EALLG D++ +  G  HT AL  +GE+Y+WG G  G LG G  RDRFTPL +  L    +  +AC + H+ A+ DNG  Y WG G  G LG   ++   SPTQ+ AL  +RVV  ACG
Sbjct:   63 SEVLKGQQTRVFQSNRMPEFEERSFSIVYQG---NRTLDIICKDRREHDVWISGLQALVNRATGDIDLSQL--RATAPET--DQKLQVVIDKGSTRVLIREGLGASF-SPLCS---ARPH---ILAVILSASIPTRVDASDVYTWGEGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGSGHTMALAVSGEVYSWGLGLGGRLGQGRERDRFTPLRLAGLRGFDITHIACNENHSVAVADNGEAYVWGRGIDGSLGVEGDK-HVSPTQIHALDGKRVVHAACG 332          
BLAST of mRNA_M-pyrifera_M_contig74012.17529.1 vs. uniprot
Match: L8GQA0_ACACA (Regulator of chromosome condensation (RCC1) repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQA0_ACACA)

HSP 1 Score: 204 bits (520), Expect = 3.170e-58
Identity = 122/272 (44.85%), Postives = 155/272 (56.99%), Query Frame = 1
Query:    4 EVRIGQKTPIFAKNPLPEYEQFSFSLIYTAAGLERSHDIVCKDQPEFDRWTHGLQYLVEAKGQVDMHNIERRLENRETVESEKLSVSFKGTQTIVNKREAQRAPILSPLYSLYLCSPHTPTMLSLPLLSLTDTVVDSSDVYAWGQGVNGRLGHGDEKDQLQPKVIEALLGKDVRAIACGLSHTAALNAAGELYTWGAGSSGSLGHGHPRDRFTPLLVNSLTSKKVLQVACGDLHTAALVDNGGMYTWGEGAQGRLGHGSEESQTSPTQVEAL 819
            E+RIGQ TP+F KN  PEYE  SFS+IY     +++ D+V K+  E D W  GL+ L      ++ H +     +    + EK+SV FKG +TIV KRE                                     S+D        NGR+GHGDE+D   P+V+EALLGKDVR IACG +HTAA N AG LYTWGAG  G LGH H RDRF PL V++L  KKV+Q ACG  HTAA+ D G +YTWG+G  G LGHG E + ++P +V +L
Sbjct:   63 EIRIGQNTPVFKKNRKPEYENVSFSIIYG----DKTLDLVSKNVRERDIWVQGLKVLT-----LEPHLLSEV--DSVATDEEKVSVKFKGKRTIVEKREV------------------------------------SND--------NGRVGHGDEEDHKVPRVVEALLGKDVRGIACGAAHTAAWNGAGVLYTWGAGQ-GRLGHDHERDRFIPLEVSALGGKKVVQAACGYAHTAAITDAGRVYTWGQGKGGVLGHGDESACSTPREVASL 278          
BLAST of mRNA_M-pyrifera_M_contig74012.17529.1 vs. uniprot
Match: A0A0L0DUN7_THETB (FYVE-type domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DUN7_THETB)

HSP 1 Score: 202 bits (514), Expect = 2.870e-57
Identity = 118/293 (40.27%), Postives = 161/293 (54.95%), Query Frame = 1
Query:    1 SEVRIGQKTPIFAKNPLPEYEQFSFSLIYTAAGLERSHDIVCKDQPEFDRWTHGLQYLVEAKGQVDMHNIERRLENRET-VESEKLSVSFKGTQTIVNKREAQRAPILSPLYSLYLCSPHTPTMLSLPLLSLTDTVVDSSDVYAWGQGVNGRLGHGDEKDQLQPKVIEALLGKDVRAIACGLSHTAALNAAGELYTWGAGSSGSLGHGHPRDRFTPLLVNSLTSKKVLQVACGDLHTAALVDNGGMYTWGEGAQGRLGHGSEESQTSPTQVEALHTERVVFIACGYVSTAAVT 876
            +EVRIGQKT +F+ N + E+E  SFSLI ++    R+ D++CKD  EF  WT  LQ +VE +   D   +   L+  ++  +S +L+V  +G   +V +RE                                    D+SD+Y WG G +GRLGHGDE+ +L P+V+EALLG DVR  A   +H  A++ AG LY WG G  G LG GH R+R TPL+V  L   KV+ +A GD HT AL D+  +Y WG GA GRLG    + +T P +V A     V  + CG VS+A VT
Sbjct:   47 NEVRIGQKTKVFSSNRMIEHEHISFSLITSS----RTLDVICKDVSEFQLWTMALQAIVEGRIVGDSPELTDALQLADSGAKSSELTVQVRGKSAVVQRRE------------------------------------DASDLYTWGDGASGRLGHGDEECRLVPQVVEALLGTDVRTFATAAAHMGAISPAGRLYMWGRGGFGRLGQGHERNRVTPLMVGELRETKVVALAAGDAHTLALTDSNAVYAWGSGADGRLGFECAKKRT-PKEVPAAGALDVTQVLCGAVSSAVVT 298          
BLAST of mRNA_M-pyrifera_M_contig74012.17529.1 vs. uniprot
Match: UPI00138FCE1B (ultraviolet-B receptor UVR8 isoform X1 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FCE1B)

HSP 1 Score: 196 bits (498), Expect = 1.040e-54
Identity = 110/282 (39.01%), Postives = 153/282 (54.26%), Query Frame = 1
Query:   13 IGQKTPIFAKNPLPEYEQFSFSLIYTAA-GLERSHDIVCKDQPEFDRWTHGLQYLVEAKGQVDMHNIERRLENRETVESEKLSVSFKGT-QTIVNKREAQRAPILSPLYSLYLCSPHTPTMLSLPLLSLTDTVVDSSDVYAWGQGVNGRLGHGDEKDQLQPKVIEALLGKDVRAIACGLSHTAALNAAGELYTWGAGSSGSLGHGHPRDRFTPLLVNSLTSKKVLQVACGDLHTAALVDNGGMYTWGEGAQGRLGHGSEESQTSPTQVEALHTERVVFIACG 852
            IGQKT +F    +P+YE  SFS++Y    G  RS DIVCK + EFD WT G+Q L+     +   N     ++++  +S  + V F    Q  V+ +E                                    D+ D+Y WG+G NG LGHG++  +  P V+EALLGKD+R +ACG +HT AL+  GE+++WG+G  G LG GH RDRFTP+ +  L S  + QVAC + H+AA+ DNG +YTWG+    RLG+     QTSP  V  L   R+  +ACG
Sbjct:   66 IGQKTKVFESCQVPQYECLSFSIMYKVNNGPIRSLDIVCKSRREFDIWTCGIQALLSGFSDIQAMNKVDFEDSQDQTDSGTVEVEFGLLGQATVHVKE------------------------------------DACDIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGYGGRLGQGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCDNGELYTWGKSGP-RLGYKCHSKQTSPRIVPDLENVRITGVACG 310          
BLAST of mRNA_M-pyrifera_M_contig74012.17529.1 vs. uniprot
Match: A0A1X7UIG6_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UIG6_AMPQE)

HSP 1 Score: 191 bits (485), Expect = 6.980e-53
Identity = 118/287 (41.11%), Postives = 171/287 (59.58%), Query Frame = 1
Query:    1 SEVRIGQKTPIFAKNPLPEYEQFSFSLIYTAAGLERSHDIVCKDQPEFDRWTHGLQYLVEAKGQVDMHNIERRLENRETVESEKLSVSFKGTQTIVNKREAQRAPILSPLYSLYLCSPHTPTMLSLPLLSLTDTVVDSSDVYAWGQGVNGRLGHGDEKDQLQPKVIEALLGKDVRAIACGLSHTAALNAAGELYTWGAGSSGSLGHGHPRDRFTPLLVNS-LTSKKVLQVACGDLHTAALVDNGGMYTWGEGAQGRLGH--GSEESQTSPTQVEALHTERVVFIACG 852
            +E++ GQ TP+F KNP+P+ E  SFSL+Y+    +RS DIVCKD+ EFD WT  L+ L+     VD ++      N+E V S KL V  +G+    ++ E Q   I + +                    L D   +S D+Y WG G  GRLGH D+K +  P V+E+LLG++V  IACG SHT ALN+ G++++WGAG  G LGHG+ RDR++PL+++  L    V+ VAC + H+A + ++G +YTWG+ A   LG+   S   QT P  V+AL+  R+V +ACG
Sbjct:   63 TEIKTGQVTPVFLKNPIPQCEAVSFSLLYS----DRSLDIVCKDKKEFDTWTTALKALI-----VDKYD------NKEAV-SAKL-VEMRGSIVSEDRLEVQLGTIKTKVL-------------------LKD---NSCDLYLWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGK-AGPFLGYMDDSVTKQTKPRLVDALYGTRIVQVACG 309          
BLAST of mRNA_M-pyrifera_M_contig74012.17529.1 vs. uniprot
Match: A0A6P8ID17_ACTTE (ultraviolet-B receptor UVR8-like isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8ID17_ACTTE)

HSP 1 Score: 189 bits (481), Expect = 3.990e-52
Identity = 105/283 (37.10%), Postives = 154/283 (54.42%), Query Frame = 1
Query:   16 GQKTPIFAKNPLPEYEQFSFSLIYTAA-GLERSHDIVCKDQPEFDRWTHGLQYLVEAKGQVDMHNIERRLENRE-TVESEKLSVSFK--GTQTIVNKREAQRAPILSPLYSLYLCSPHTPTMLSLPLLSLTDTVVDSSDVYAWGQGVNGRLGHGDEKDQLQPKVIEALLGKDVRAIACGLSHTAALNAAGELYTWGAGSSGSLGHGHPRDRFTPLLVNSLTSKKVLQVACGDLHTAALVDNGGMYTWGEGAQGRLGHGSEESQTSPTQVEALHTERVVFIACG 852
            GQKT +F    +P+YE  SFS++Y  + G  ++ DIVCK + EF+ WT GLQ L    G  D   ++ +L+  E T +++ + V F   G +T+  K                                      D+ DVY WG G  G LGHG++ ++  P+V+EALLGKD+R +ACG SHT AL+  GE+++WG+G  G LG GH RDRFTP+ + +L  K V +V+C + H+AA+  N  + TWG+    RLG+     +TSP  V+ L   +V  + CG
Sbjct:   89 GQKTKVFESCQIPQYECLSFSVVYKISNGSTKTLDIVCKSKVEFEAWTTGLQAL--QSGFNDKEAVDSKLDTEEVTDQTDNVKVEFSRLGLETVKYKE-------------------------------------DACDVYTWGSGTKGMLGHGEDTEESYPRVVEALLGKDIRKVACGTSHTIALSKEGEVFSWGSGYGGRLGQGHLRDRFTPIRIAALKGKNVTEVSCNEFHSAAICGNEDLLTWGKNGP-RLGYECSSKETSPRLVKGLDDVKVTHVTCG 331          
BLAST of mRNA_M-pyrifera_M_contig74012.17529.1 vs. uniprot
Match: UPI000A2A78BF (ultraviolet-B receptor UVR8 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A78BF)

HSP 1 Score: 184 bits (466), Expect = 4.340e-50
Identity = 110/287 (38.33%), Postives = 154/287 (53.66%), Query Frame = 1
Query:   16 GQKTPIFAKNPLPEYEQFSFSLIYTAA-GLERSHDIVCKDQPEFDRWTHGLQYLVEAKGQVDMHNIERRLENRETVESE-------KLSVSFKGTQTIVNKREAQRAPILSPLYSLYLCSPHTPTMLSLPLLSLTDTVVDSSDVYAWGQGVNGRLGHGDEKDQLQPKVIEALLGKDVRAIACGLSHTAALNAAGELYTWGAGSSGSLGHGHPRDRFTPLLVNSLTSKKVLQVACGDLHTAALVDNGGMYTWGEGAQGRLGHGSEESQTSPTQVEALHTERVVFIACG 852
            GQKT +F    +P+YE  SFSL+Y  + G  R+ DIVCK   E+  WT GLQ L+   G  D   ++  L   E VE++       K+  S  G +TI  K                                      D+ DVY WG+   G LGHG++ +++ P+V+EALLG+D+R IACG SH  AL+  G++++WG G  G LG GH RDRFTPL +  L  K V++VAC DLH+A + +NG + TWG+G    LG+     +TSP  V+ L   +VV ++CG
Sbjct:   69 GQKTKVFENCQIPQYECLSFSLVYRISNGSSRTLDIVCKSTQEYQIWTTGLQALL--TGFSDRKTLDSML--GEAVETDQPDGENVKVEFSRLGMETIKYKE-------------------------------------DACDVYTWGKCTKGMLGHGEDSEEMSPRVVEALLGRDIRKIACGASHMLALSRDGDVFSWGNGHGGRLGQGHLRDRFTPLRIAFLHDKDVVEVACNDLHSAVVCNNGQLLTWGKGGPW-LGYDCLSKETSPRLVQGLDDIKVVQVSCG 313          
BLAST of mRNA_M-pyrifera_M_contig74012.17529.1 vs. uniprot
Match: A0A7M5X0Y9_9CNID (FYVE-type domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X0Y9_9CNID)

HSP 1 Score: 183 bits (464), Expect = 7.700e-50
Identity = 110/292 (37.67%), Postives = 160/292 (54.79%), Query Frame = 1
Query:    4 EVRIGQKTPIFAKNPLPEYEQFSFSLIYTAAGLERSHDIVCKDQPEFDRWTHGLQYLVEAKGQVDMHNIERRLENRETVESEKLSVSFKGTQTIVNKREAQRAPILSPLYSLYLCSPHTPTMLSLPLLSLTDTVVDSSDVYAWGQGVNGRLGHGDEKDQLQPKVIEALLGKDVRAIACGLSHTAALNAAGELYTWGAGSSGSLGHGHPRDRFTPLLVNSLTSKKVLQVACGDLHTAALVDNGGMYTWGEGAQGRLGHGSE-ESQTSPTQVEALHTERVVFIACGYVSTAAVT 876
            E+  GQKT +F  NP+PEYE  SFS++Y+    ERS DIVCKD+ E+D WT GL+ L    G  D+  +  +L + E   S KLS+ F      V+ +E                                    D+ D+Y WG    G LGHG+ +++L P+V+EALLG+D+R IACG  HT A++  GE+++ G+G  G LG  +  DR+ PL V SL+ KKV+ ++C +LH+A +   G +Y++G     RLG+  E   Q  P QV+AL    +V ++CG   T A+T
Sbjct:   70 EIIKGQKTKVFEGNPIPEYEAISFSIMYSFGNQERSLDIVCKDRAEYDVWTAGLEAL--RNGFNDLDAVSSKLSDIEDGSS-KLSLEFGIISDRVSVKE------------------------------------DACDIYTWGASTKGTLGHGEAEEELVPRVVEALLGRDIRKIACGFEHTLAVSVTGEVFSMGSGRGGKLGD-NIHDRYMPLKVGSLSEKKVVALSCSELHSAVVTSTGELYSFGRTGP-RLGYSIEGRKQEIPKQVDALKKHFIVKVSCGLKYTLALT 320          
BLAST of mRNA_M-pyrifera_M_contig74012.17529.1 vs. uniprot
Match: A7RI68_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RI68_NEMVE)

HSP 1 Score: 176 bits (446), Expect = 2.750e-47
Identity = 106/292 (36.30%), Postives = 156/292 (53.42%), Query Frame = 1
Query:   13 IGQKTPIFAKNPLPEYEQFSFSLIYTAA-GLERSHDIVCKDQPEFDRWTHGLQYLVEAKGQVDMHNIERRLENRETVESEKLSVSFKGT-QTIVNKREAQRAPILSPLYSLYLCSPHTPTMLSLPLLSLTDTVVDSSDVYAWGQGVNGRLGHGDEKDQLQPKVIEALLGKDVRAIACGLSHTAALNAAGELYTWGAGSSGSLGHGHPRDRFTPLLVNSLTSKKVLQVACGDLHTAALV---DNGGMYTWGEGAQGRLGHGSEESQTSPTQ-VEALHTERVVFIACGYVSTAA 870
            IGQKT +F    +P+YE  SFS++Y    G  RS DIVCK + EFD WT G+Q L+     +   N     ++++  +S  + V F    Q  V+ +E                                    D+ D+Y WG+G NG LGHG++  +  P V+EALLGKD+R +ACG +HT AL+  GE+++WG+G  G LG GH RDRFTP+ +  L S  + QVAC + H+AA+      G ++++GE   G+LG   ++  TS  Q V +L   ++  +ACG   +AA
Sbjct:  107 IGQKTKVFESCQVPQYECLSFSIMYKVNNGPIRSLDIVCKSRREFDIWTCGIQALLSGFSDIQAMNKVDFEDSQDQTDSGTVEVEFGLLGQATVHVKE------------------------------------DACDIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGYGGRLGQGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAA 362          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74012.17529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4IFA4_9EUKA5.410e-8549.66Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A0D2WGS2_CAPO34.300e-5943.51PH domain-containing protein n=3 Tax=Capsaspora ow... [more]
L8GQA0_ACACA3.170e-5844.85Regulator of chromosome condensation (RCC1) repeat... [more]
A0A0L0DUN7_THETB2.870e-5740.27FYVE-type domain-containing protein n=1 Tax=Thecam... [more]
UPI00138FCE1B1.040e-5439.01ultraviolet-B receptor UVR8 isoform X1 n=1 Tax=Nem... [more]
A0A1X7UIG6_AMPQE6.980e-5341.11Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A6P8ID17_ACTTE3.990e-5237.10ultraviolet-B receptor UVR8-like isoform X1 n=2 Ta... [more]
UPI000A2A78BF4.340e-5038.33ultraviolet-B receptor UVR8 n=1 Tax=Exaiptasia dia... [more]
A0A7M5X0Y9_9CNID7.700e-5037.67FYVE-type domain-containing protein n=1 Tax=Clytia... [more]
A7RI68_NEMVE2.750e-4736.30Predicted protein n=1 Tax=Nematostella vectensis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74012contigM-pyrifera_M_contig74012:1..1069 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score204.9
Seed ortholog evalue5.1e-50
Seed eggNOG ortholog529818.AMSG_11202T0
KEGG koko:K10614,ko:K19607,ko:K22218
KEGG Pathwayko04120,map04120
Hectar predicted targeting categoryother localisation
GOsGO:0000726,GO:0003674,GO:0003824,GO:0004842,GO:0005085,GO:0005086,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005794,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006303,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006974,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019899,GO:0019941,GO:0030163,GO:0031625,GO:0031974,GO:0031981,GO:0032182,GO:0032183,GO:0032446,GO:0033036,GO:0033554,GO:0034613,GO:0034641,GO:0036211,GO:0042886,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0045184,GO:0046483,GO:0046907,GO:0050896,GO:0051020,GO:0051179,GO:0051234,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0061630,GO:0061659,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0090304,GO:0098772,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.guanyl-nucleotide exchange factor activity
EggNOG OGs2QSCJ@2759,COG5184@1
EC2.3.2.26,2.8.2.20
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036,ko04121
Exons4
Model size876
Cds size876
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74012.17529.1prot_M-pyrifera_M_contig74012.17529.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74012 1..1069 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816638.0732903-CDS-M-pyrifera_M_contig74012:0..3011622816638.0732903-CDS-M-pyrifera_M_contig74012:0..301Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74012 1..301 +
1692278091.913347-CDS-M-pyrifera_M_contig74012:0..3011692278091.913347-CDS-M-pyrifera_M_contig74012:0..301Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74012 1..301 +
1622816638.0863128-CDS-M-pyrifera_M_contig74012:372..4621622816638.0863128-CDS-M-pyrifera_M_contig74012:372..462Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74012 373..462 +
1692278091.927651-CDS-M-pyrifera_M_contig74012:372..4621692278091.927651-CDS-M-pyrifera_M_contig74012:372..462Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74012 373..462 +
1622816638.1006167-CDS-M-pyrifera_M_contig74012:529..7371622816638.1006167-CDS-M-pyrifera_M_contig74012:529..737Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74012 530..737 +
1692278091.9424968-CDS-M-pyrifera_M_contig74012:529..7371692278091.9424968-CDS-M-pyrifera_M_contig74012:529..737Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74012 530..737 +
1622816638.113515-CDS-M-pyrifera_M_contig74012:792..10691622816638.113515-CDS-M-pyrifera_M_contig74012:792..1069Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74012 793..1069 +
1692278091.9594114-CDS-M-pyrifera_M_contig74012:792..10691692278091.9594114-CDS-M-pyrifera_M_contig74012:792..1069Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74012 793..1069 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74012.17529.1

>prot_M-pyrifera_M_contig74012.17529.1 ID=prot_M-pyrifera_M_contig74012.17529.1|Name=mRNA_M-pyrifera_M_contig74012.17529.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=292bp
SEVRIGQKTPIFAKNPLPEYEQFSFSLIYTAAGLERSHDIVCKDQPEFDR
WTHGLQYLVEAKGQVDMHNIERRLENRETVESEKLSVSFKGTQTIVNKRE
AQRAPILSPLYSLYLCSPHTPTMLSLPLLSLTDTVVDSSDVYAWGQGVNG
RLGHGDEKDQLQPKVIEALLGKDVRAIACGLSHTAALNAAGELYTWGAGS
SGSLGHGHPRDRFTPLLVNSLTSKKVLQVACGDLHTAALVDNGGMYTWGE
GAQGRLGHGSEESQTSPTQVEALHTERVVFIACGYVSTAAVT
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mRNA from alignment at M-pyrifera_M_contig74012:1..1069+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74012.17529.1 ID=mRNA_M-pyrifera_M_contig74012.17529.1|Name=mRNA_M-pyrifera_M_contig74012.17529.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1069bp|location=Sequence derived from alignment at M-pyrifera_M_contig74012:1..1069+ (Macrocystis pyrifera P11B4 male)
TCTGAGGTGCGCATTGGCCAGAAGACCCCTATCTTTGCCAAGAACCCACT CCCAGAGTACGAGCAGTTCTCTTTCTCCCTCATCTACACCGCTGCGGGCT TGGAGCGCAGCCACGACATTGTGTGCAAAGATCAACCCGAATTTGATCGC TGGACGCATGGCCTTCAGTATCTCGTGGAGGCCAAAGGCCAAGTGGACAT GCATAACATTGAGCGTCGCCTCGAGAACAGAGAGACAGTGGAAAGTGAGA AGCTCTCTGTCTCGTTCAAGGGAACGCAGACCATTGTGAACAAGAGAGAA GGTATATGCTACTCCTCCCGTGGTTTGTTGTGTTTTCGTGGATTGCTCTT CTCGTTCGTGCTGGCCAGCCAGCCCAGCGAGCACCCATCCTATCACCACT CTACTCGCTATATCTCTGCTCTCCACACACGCCCACAATGCTCTCTTTAC CACTCCTGTCACGTACGAGCATAACTGTCTCTCTCTCTTCCGCTCTCTCT TTCTCTGCATGGTTTGTGATCGATTACAGTAACTGACACAGTCGTAGACA GCAGCGATGTCTATGCTTGGGGCCAGGGCGTGAACGGCAGACTGGGCCAT GGAGACGAGAAAGATCAGCTCCAGCCCAAGGTGATCGAAGCCTTACTTGG AAAGGATGTCAGGGCCATTGCTTGCGGACTCTCTCACACCGCAGCCTTGA ATGCTGCAGGAGAGCTCTACACATGGGGTGCAGGCAGGTATGATACTCCG CATGTGTACAGTACACGTGGCCACTTGAGCTGACGATTGTAGCTCTGGAT CCCTTGGACACGGCCACCCACGGGACCGCTTCACACCTTTGCTGGTGAAC AGTCTTACCAGCAAGAAAGTGCTGCAAGTGGCCTGCGGTGACCTTCACAC TGCTGCTTTGGTGGACAATGGAGGAATGTATACTTGGGGTGAGGGCGCAC AAGGGCGCCTTGGCCATGGCAGCGAAGAGTCGCAGACAAGCCCTACTCAG GTAGAGGCTCTTCACACAGAGAGAGTGGTGTTCATTGCCTGTGGATACGT GAGCACGGCAGCTGTGACT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74012:1..1069+

>mRNA_M-pyrifera_M_contig74012.17529.1 ID=mRNA_M-pyrifera_M_contig74012.17529.1|Name=mRNA_M-pyrifera_M_contig74012.17529.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1752bp|location=Sequence derived from alignment at M-pyrifera_M_contig74012:1..1069+ (Macrocystis pyrifera P11B4 male)
TCTGAGGTGCGCATTGGCCAGAAGACCCCTATCTTTGCCAAGAACCCACT
CCCAGAGTACGAGCAGTTCTCTTTCTCCCTCATCTACACCGCTGCGGGCT
TGGAGCGCAGCCACGACATTGTGTGCAAAGATCAACCCGAATTTGATCGC
TGGACGCATGGCCTTCAGTATCTCGTGGAGGCCAAAGGCCAAGTGGACAT
GCATAACATTGAGCGTCGCCTCGAGAACAGAGAGACAGTGGAAAGTGAGA
AGCTCTCTGTCTCGTTCAAGGGAACGCAGACCATTGTGAACAAGAGAGAA
GTCTGAGGTGCGCATTGGCCAGAAGACCCCTATCTTTGCCAAGAACCCAC
TCCCAGAGTACGAGCAGTTCTCTTTCTCCCTCATCTACACCGCTGCGGGC
TTGGAGCGCAGCCACGACATTGTGTGCAAAGATCAACCCGAATTTGATCG
CTGGACGCATGGCCTTCAGTATCTCGTGGAGGCCAAAGGCCAAGTGGACA
TGCATAACATTGAGCGTCGCCTCGAGAACAGAGAGACAGTGGAAAGTGAG
AAGCTCTCTGTCTCGTTCAAGGGAACGCAGACCATTGTGAACAAGAGAGA
AGCCCAGCGAGCACCCATCCTATCACCACTCTACTCGCTATATCTCTGCT
CTCCACACACGCCCACAATGCTCTCTTTACCACTCCTGTCACCCCAGCGA
GCACCCATCCTATCACCACTCTACTCGCTATATCTCTGCTCTCCACACAC
GCCCACAATGCTCTCTTTACCACTCCTGTCACTAACTGACACAGTCGTAG
ACAGCAGCGATGTCTATGCTTGGGGCCAGGGCGTGAACGGCAGACTGGGC
CATGGAGACGAGAAAGATCAGCTCCAGCCCAAGGTGATCGAAGCCTTACT
TGGAAAGGATGTCAGGGCCATTGCTTGCGGACTCTCTCACACCGCAGCCT
TGAATGCTGCAGGAGAGCTCTACACATGGGGTGCAGGCAGTAACTGACAC
AGTCGTAGACAGCAGCGATGTCTATGCTTGGGGCCAGGGCGTGAACGGCA
GACTGGGCCATGGAGACGAGAAAGATCAGCTCCAGCCCAAGGTGATCGAA
GCCTTACTTGGAAAGGATGTCAGGGCCATTGCTTGCGGACTCTCTCACAC
CGCAGCCTTGAATGCTGCAGGAGAGCTCTACACATGGGGTGCAGGCAGCT
CTGGATCCCTTGGACACGGCCACCCACGGGACCGCTTCACACCTTTGCTG
GTGAACAGTCTTACCAGCAAGAAAGTGCTGCAAGTGGCCTGCGGTGACCT
TCACACTGCTGCTTTGGTGGACAATGGAGGAATGTATACTTGGGGTGAGG
GCGCACAAGGGCGCCTTGGCCATGGCAGCGAAGAGTCGCAGACAAGCCCT
ACTCAGGTAGAGGCTCTTCACACAGAGAGAGTGGTGTTCATTGCCTGTGG
ATACGTGAGCACGGCAGCTGTGACTCTCTGGATCCCTTGGACACGGCCAC
CCACGGGACCGCTTCACACCTTTGCTGGTGAACAGTCTTACCAGCAAGAA
AGTGCTGCAAGTGGCCTGCGGTGACCTTCACACTGCTGCTTTGGTGGACA
ATGGAGGAATGTATACTTGGGGTGAGGGCGCACAAGGGCGCCTTGGCCAT
GGCAGCGAAGAGTCGCAGACAAGCCCTACTCAGGTAGAGGCTCTTCACAC
AGAGAGAGTGGTGTTCATTGCCTGTGGATACGTGAGCACGGCAGCTGTGA
CT
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