mRNA_M-pyrifera_M_contig73897.17506.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig73897.17506.1 vs. uniprot
Match: A0A7S1QII4_NEODS (Hypothetical protein (Fragment) n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1QII4_NEODS) HSP 1 Score: 89.4 bits (220), Expect = 7.530e-20 Identity = 47/102 (46.08%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 34 ILRTKKHSLSSAPRVSEEDIKRFLDLDLSILGSPREEYEAYAIGVRKEYIHVPRDAYISGRTAVLRSLVPPAPASPFFTDEARAKLDANARSNVAWELEELK 339 IL+TK H+ + P +E+D++ FLD+DL+ILG+P+E Y YA + +EY H PRDAY +GR VLR+ A F T+E +L NAR N+AWE+ +L+ Sbjct: 65 ILQTKNHT--TCPLDAEKDLRLFLDMDLAILGAPKERYTEYAEQIAREYSHYPRDAYCAGRAKVLRTFA--VDAHLFKTEELSERLLKNARENLAWEITQLE 162
BLAST of mRNA_M-pyrifera_M_contig73897.17506.1 vs. uniprot
Match: A0A4D9D6N9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6N9_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.190e-18 Identity = 54/138 (39.13%), Postives = 74/138 (53.62%), Query Frame = 1 Query: 1 SKEDLLYAGALILRTKKHSLSSAPRVSEEDIKRFLDLDLSILGSPREEYEAYAIGVRKEYIHVPRDAYISGRTAVLRSLVPPAP---------------ASPFFTDEARAKLDANARSNVAWELEELKLGKIPGEDGE 369 SKED+ A I+ TK H +S +P V ++D+ FLD+D+SILG PRE Y YA +R EY HVPR Y+ R +L S + AS F+ +E L+ AR N+A E+ L+ G IP E+ E Sbjct: 2 SKEDIGVVHAYIMATKTHQMSQSPEV-DDDLALFLDIDMSILGQPREIYMRYAGAIRAEYKHVPRSLYLEKRAQILSSFIEGGEKYIKGGRQTLRREIYASQFYKNE----LEEQARDNIAGEIYMLRRGIIPYEEKE 134
BLAST of mRNA_M-pyrifera_M_contig73897.17506.1 vs. uniprot
Match: W7U6F4_9STRA (Hd phosphohydrolase family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6F4_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.190e-17 Identity = 55/138 (39.86%), Postives = 74/138 (53.62%), Query Frame = 1 Query: 1 SKEDLLYAGALILRTKKHSLSSAPRVSEEDIKRFLDLDLSILGSPREEYEAYAIGVRKEYIHVPRDAYISGRTAVLRSLVPPAP---------------ASPFFTDEARAKLDANARSNVAWELEELKLGKIPGEDGE 369 SKED+ A IL TK H +S +P V ++D+ FLD+D+SILG PRE Y YA +R E+ HVPR Y+ R +L S + AS F+ +E L+ AR N+A E+ L+ G IP ED E Sbjct: 127 SKEDIGVVHAYILATKTHQMSQSPEV-DDDLALFLDIDMSILGQPREIYMRYAGAIRAEHKHVPRSLYLEKRAQILSSFIEGGGKYIKGGRQSLRREIYASQFYKNE----LEEQARDNIAGEIYMLRRGVIPYEDKE 259
BLAST of mRNA_M-pyrifera_M_contig73897.17506.1 vs. uniprot
Match: UPI001C897F3B (hypothetical protein n=1 Tax=Qipengyuania polymorpha TaxID=2867234 RepID=UPI001C897F3B) HSP 1 Score: 75.9 bits (185), Expect = 1.840e-14 Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 1 Query: 13 LLYAGALILRTKKHSLSSAPRVSEEDIKRFLDLDLSILGSPREEYEAYAIGVRKEYIHVPRDAYISGRTAVLRSLVPPAPASPFFTDEARAKLDANARSNVAWELEELKLG 345 L+ A IL T+ H + AP + DI FLD+DL+ILG+ E ++ Y +R+EY HVP DA+ GR+AVL A +F+D + + AR+N+A + L G Sbjct: 88 LVLAETAILATEGHRMPEAPPGAASDIAHFLDMDLAILGASEERFDIYERQIRREYAHVPEDAFRKGRSAVLEGFA--ARERLYFSDWGYERFEMKARANLARSIAALHAG 196
BLAST of mRNA_M-pyrifera_M_contig73897.17506.1 vs. uniprot
Match: A0A835ZF01_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF01_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.980e-14 Identity = 47/107 (43.93%), Postives = 64/107 (59.81%), Query Frame = 1 Query: 34 ILRTKKHSLSSAPRVSEEDIKRFLDLDLSILGSPREEYEAYAIGVRKEYIHVPRDAYISGRTAVLRSLVPPAPASPFFTDEARAKLDANARSNVAWELEELKLGKIP 354 I+ TK HS S+P ++ ++ LDLDL++LG PRE Y+ YA +R+EY VP Y S R AVLR L APA + T +A AR N+A E+ +L+ G IP Sbjct: 117 IIATKTHS--SSPATADSNLAALLDLDLAVLGRPREGYQQYASQIRREYSFVPAAEYCSKRAAVLRQLAA-APAL-YRTQHFATTHEARARENLAAEIAQLERGDIP 219
BLAST of mRNA_M-pyrifera_M_contig73897.17506.1 vs. uniprot
Match: UPI00035E12B5 (hypothetical protein n=1 Tax=Algicola sagamiensis TaxID=163869 RepID=UPI00035E12B5) HSP 1 Score: 73.2 bits (178), Expect = 2.480e-13 Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 1 Query: 31 LILRTKKHSLSSAPRVSEEDIKRFLDLDLSILGSPREEYEAYAIGVRKEYIHVPRDAYISGRTAVLRSLVPPAPASPFFTDEARAKLDANARSNVAWELEEL 336 +IL TK H + + +E + LD D++ILG R+EYE YA+ VRKE++HVP+ Y GR LR ++ + S + TD RA+ +A AR N+ EL+ L Sbjct: 112 IILATKNHQPTES---RDEAMLSVLDADMAILGQTRDEYEQYAVAVRKEFVHVPKFLYQRGRVQFLREVL--SLTSIYHTDWFRAQFEAQARLNIQAELQSL 208
BLAST of mRNA_M-pyrifera_M_contig73897.17506.1 vs. uniprot
Match: A0A0Q8BD47_9HYPH (Uncharacterized protein n=1 Tax=Mesorhizobium sp. Root157 TaxID=1736477 RepID=A0A0Q8BD47_9HYPH) HSP 1 Score: 70.5 bits (171), Expect = 2.300e-12 Identity = 42/107 (39.25%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 28 ALILRTKKHSLSSAPRVSE-EDIKRFLDLDLSILGSPREEYEAYAIGVRKEYIHVPRDAYISGRTAVLRSLVPPAPASPFF--TDEARAKLDANARSNVAWELEELK 339 A+IL T H + + D FLD+DLSILG+ E ++AY +R+EY VP DA+I+GR+AVLR+ + P+ ++E R +L+ AR+N+ L LK Sbjct: 96 AMILATAMHEVPVFANIDAVRDAALFLDMDLSILGASPEVFDAYEAAIRREYAWVPEDAWIAGRSAVLRTFLD----RPYIYHSEEFRVRLEHRARANIERSLASLK 198
BLAST of mRNA_M-pyrifera_M_contig73897.17506.1 vs. uniprot
Match: A0A2J9DZZ7_9GAMM (Uncharacterized protein n=1 Tax=Psychrobacter sp. FDAARGOS_221 TaxID=1975705 RepID=A0A2J9DZZ7_9GAMM) HSP 1 Score: 71.2 bits (173), Expect = 2.500e-12 Identity = 46/110 (41.82%), Postives = 61/110 (55.45%), Query Frame = 1 Query: 28 ALILRTKKHSLSSAPRVSEE-------DIKRFLDLDLSILGSPREEYEAYAIGVRKEYIHVPRDAYISGRTAVLRSLVPPAPASPFFTDEARAKLDANARSNVAWELEEL 336 ALI+ T KH +S A E+ D + FLD+DL+ILGSPR+ Y+ YA VR EY HV A+ GR AVL + +FT A+ + NAR N+ E+ EL Sbjct: 145 ALIMMTAKHEVSQADAELEQKITLKVQDSQYFLDMDLAILGSPRQVYQDYARQVRLEYAHVNDSAFKQGRKAVLERFLQRE--RLYFTQAFYAEYEQNARHNIQQEIREL 252
BLAST of mRNA_M-pyrifera_M_contig73897.17506.1 vs. uniprot
Match: UPI001C88CEF9 (hypothetical protein n=1 Tax=Qipengyuania vesicularis TaxID=2867232 RepID=UPI001C88CEF9) HSP 1 Score: 69.7 bits (169), Expect = 4.070e-12 Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 22 AGALILRTKKHSLSSAPRVSEEDIKRFLDLDLSILGSPREEYEAYAIGVRKEYIHVPRDAYISGRTAVLRSLVPPAPASPFFTDEARAKLDANARSNVAWELEELK 339 A A+IL T+ H + DI FLD+DL ILG+ E ++ Y +R+EY HVP +A+ GR AVL S +F++ R + + AR N+A LE L+ Sbjct: 92 AEAMILATEGHIMPDIAGDDGSDIAHFLDMDLGILGASEERFDIYEDQIRREYSHVPDEAFRKGRAAVLESFA--GRERLYFSEWGRDRFEERARRNLARSLERLR 195
BLAST of mRNA_M-pyrifera_M_contig73897.17506.1 vs. uniprot
Match: A0A1F7WA82_9BACT (Uncharacterized protein n=1 Tax=Candidatus Uhrbacteria bacterium RIFOXYB2_FULL_45_11 TaxID=1802421 RepID=A0A1F7WA82_9BACT) HSP 1 Score: 69.7 bits (169), Expect = 5.380e-12 Identity = 45/102 (44.12%), Postives = 57/102 (55.88%), Query Frame = 1 Query: 37 LRTKKHSLSSAPRVSEEDIKRFLDLDLSILGSPREEYEAYAIGVRKEYIHVPRDAYISGRTAVLRSLVPPAPASPFFTDEARAKLDANARSNVAWELEELKL 342 +R KH A SE D + +D+DLSILG P YEAY +R EY +P YI GR V+RS + A F T R + +A AR+N+A ELE LKL Sbjct: 117 IRATKH----AETPSENDAQIMVDVDLSILGQPWNVYEAYTHQIRTEYKRIPNLLYIPGRHKVMRSFLDRA--YIFSTANFRVRYEAQARANIARELETLKL 212 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73897.17506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig73897.17506.1 >prot_M-pyrifera_M_contig73897.17506.1 ID=prot_M-pyrifera_M_contig73897.17506.1|Name=mRNA_M-pyrifera_M_contig73897.17506.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp SKEDLLYAGALILRTKKHSLSSAPRVSEEDIKRFLDLDLSILGSPREEYEback to top mRNA from alignment at M-pyrifera_M_contig73897:4..432+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig73897.17506.1 ID=mRNA_M-pyrifera_M_contig73897.17506.1|Name=mRNA_M-pyrifera_M_contig73897.17506.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=429bp|location=Sequence derived from alignment at M-pyrifera_M_contig73897:4..432+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig73897:4..432+ >mRNA_M-pyrifera_M_contig73897.17506.1 ID=mRNA_M-pyrifera_M_contig73897.17506.1|Name=mRNA_M-pyrifera_M_contig73897.17506.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig73897:4..432+ (Macrocystis pyrifera P11B4 male)back to top |