mRNA_M-pyrifera_M_contig73813.17490.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig73813.17490.1 vs. uniprot
Match: T2D3N0_9ROSA (Protein TIC 214 (Fragment) n=8 Tax=Prunus TaxID=3754 RepID=T2D3N0_9ROSA) HSP 1 Score: 240 bits (613), Expect = 9.900e-78 Identity = 132/164 (80.49%), Postives = 132/164 (80.49%), Query Frame = 1 Query: 1 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI-------------------------------VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 399 VCINKIH ILLIINYLEFEQKTNPFDINDRKSLVTEI VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE Sbjct: 121 VCINKIHAILLIINYLEFEQKTNPFDINDRKSLVTEIGYLLNLINELAVKSTSSLNFKRLFLVPEHEQVRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 284
BLAST of mRNA_M-pyrifera_M_contig73813.17490.1 vs. uniprot
Match: A0A0D4BSG3_PRUMU (Protein TIC 214 (Fragment) n=5 Tax=Amygdaleae TaxID=721805 RepID=A0A0D4BSG3_PRUMU) HSP 1 Score: 238 bits (606), Expect = 1.040e-76 Identity = 131/164 (79.88%), Postives = 131/164 (79.88%), Query Frame = 1 Query: 1 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI-------------------------------VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 399 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI VRIHSEDQFKILNFLFDAVRTVPNDKT KKKSIEIKEINKKVPRWSYKLI DLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE Sbjct: 121 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEIGYLLNLINELAVKSTSSLNFQRIFLVPEHEQVRIHSEDQFKILNFLFDAVRTVPNDKTKKKKSIEIKEINKKVPRWSYKLITDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 284
BLAST of mRNA_M-pyrifera_M_contig73813.17490.1 vs. uniprot
Match: A0A6G6YB82_9ROSA (Protein TIC 214 n=8 Tax=Prunus TaxID=3754 RepID=A0A6G6YB82_9ROSA) HSP 1 Score: 243 bits (619), Expect = 1.630e-73 Identity = 133/164 (81.10%), Postives = 133/164 (81.10%), Query Frame = 1 Query: 1 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI-------------------------------VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 399 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE Sbjct: 572 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEIGYLLNLINELAVKSTSSLNFQRLFLVPEHEQVRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 735
BLAST of mRNA_M-pyrifera_M_contig73813.17490.1 vs. uniprot
Match: A0A8F0K0V8_PRUDO (Protein TIC 214 n=2 Tax=Prunus TaxID=3754 RepID=A0A8F0K0V8_PRUDO) HSP 1 Score: 243 bits (619), Expect = 7.680e-72 Identity = 133/164 (81.10%), Postives = 133/164 (81.10%), Query Frame = 1 Query: 1 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI-------------------------------VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 399 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE Sbjct: 313 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEIGYLLNLINELAVKSTSSLNFQRLFLVPEHEQVRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 476
BLAST of mRNA_M-pyrifera_M_contig73813.17490.1 vs. uniprot
Match: A0A7T8E750_PRUPE (Protein TIC 214 n=1 Tax=Prunus persica TaxID=3760 RepID=A0A7T8E750_PRUPE) HSP 1 Score: 243 bits (619), Expect = 7.680e-72 Identity = 133/164 (81.10%), Postives = 133/164 (81.10%), Query Frame = 1 Query: 1 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI-------------------------------VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 399 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE Sbjct: 320 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEIGYLLNLINELAVKSTSSLNFQRLFLVPEHEQVRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 483
BLAST of mRNA_M-pyrifera_M_contig73813.17490.1 vs. uniprot
Match: A0A5C2A5F9_PRUDU (Protein TIC 214 n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5C2A5F9_PRUDU) HSP 1 Score: 243 bits (619), Expect = 7.720e-72 Identity = 133/164 (81.10%), Postives = 133/164 (81.10%), Query Frame = 1 Query: 1 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI-------------------------------VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 399 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE Sbjct: 510 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEIGYLLNLINELAVKSTSSLNFQRLFLVPEHEQVRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 673
BLAST of mRNA_M-pyrifera_M_contig73813.17490.1 vs. uniprot
Match: A0A7S6XZ21_9ROSA (Protein TIC 214 n=1 Tax=Prunus davidiana var. potaninii TaxID=1044924 RepID=A0A7S6XZ21_9ROSA) HSP 1 Score: 243 bits (619), Expect = 7.720e-72 Identity = 133/164 (81.10%), Postives = 133/164 (81.10%), Query Frame = 1 Query: 1 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI-------------------------------VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 399 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE Sbjct: 527 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEIGYLLNLINELAVKSTSSLNFQRLFLVPEHEQVRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 690
BLAST of mRNA_M-pyrifera_M_contig73813.17490.1 vs. uniprot
Match: A0A7L7T774_PRUDO (Protein TIC 214 n=1 Tax=Prunus domestica TaxID=3758 RepID=A0A7L7T774_PRUDO) HSP 1 Score: 243 bits (619), Expect = 7.720e-72 Identity = 133/164 (81.10%), Postives = 133/164 (81.10%), Query Frame = 1 Query: 1 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI-------------------------------VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 399 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE Sbjct: 527 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEIGYLLNLINELAVKSTSSLNFQRLFLVPEHEQVRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 690
BLAST of mRNA_M-pyrifera_M_contig73813.17490.1 vs. uniprot
Match: A0A3Q9VI61_PRUPE (Protein TIC 214 n=1 Tax=Prunus persica TaxID=3760 RepID=A0A3Q9VI61_PRUPE) HSP 1 Score: 243 bits (619), Expect = 7.720e-72 Identity = 133/164 (81.10%), Postives = 133/164 (81.10%), Query Frame = 1 Query: 1 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI-------------------------------VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 399 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE Sbjct: 533 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEIGYLLNLINELAVKSTSSLNFQRLFLVPEHEQVRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 696
BLAST of mRNA_M-pyrifera_M_contig73813.17490.1 vs. uniprot
Match: A0A385H4R8_9ROSA (Protein TIC 214 n=3 Tax=Prunus TaxID=3754 RepID=A0A385H4R8_9ROSA) HSP 1 Score: 243 bits (619), Expect = 7.720e-72 Identity = 133/164 (81.10%), Postives = 133/164 (81.10%), Query Frame = 1 Query: 1 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI-------------------------------VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 399 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEI VRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE Sbjct: 535 VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEIGYLLNLINELAVKSTSSLNFQRLFLVPEHEQVRIHSEDQFKILNFLFDAVRTVPNDKTIKKKSIEIKEINKKVPRWSYKLINDLEQQEGETEESVVEDHEIRSRKAKRVVIFTDNHQNTDAYTNTQE 698 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73813.17490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig73813.17490.1 >prot_M-pyrifera_M_contig73813.17490.1 ID=prot_M-pyrifera_M_contig73813.17490.1|Name=mRNA_M-pyrifera_M_contig73813.17490.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp VCINKIHGILLIINYLEFEQKTNPFDINDRKSLVTEIVRIHSEDQFKILNback to top mRNA from alignment at M-pyrifera_M_contig73813:22..513- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig73813.17490.1 ID=mRNA_M-pyrifera_M_contig73813.17490.1|Name=mRNA_M-pyrifera_M_contig73813.17490.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig73813:22..513- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig73813:22..513- >mRNA_M-pyrifera_M_contig73813.17490.1 ID=mRNA_M-pyrifera_M_contig73813.17490.1|Name=mRNA_M-pyrifera_M_contig73813.17490.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig73813:22..513- (Macrocystis pyrifera P11B4 male)back to top |