mRNA_M-pyrifera_M_contig7376.17479.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7376.17479.1 vs. uniprot
Match: A0A835YL62_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL62_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.750e-25 Identity = 57/85 (67.06%), Postives = 60/85 (70.59%), Query Frame = 1 Query: 7 REKWQVCNQLGGPRATAIAISERAAHMRLVPWAGVAARFSTTEEGGDAGGPKPPRGAAYCFLPLPVVTGLPVHVNGYFELSSNRQ 261 R++W VCNQLGG RA AIA R MR VPWAGVAAR DAG RG AYCFLPLPV TGLPVHVNGYFELSSNR+ Sbjct: 326 RQRWLVCNQLGGKRANAIAADPRHELMRFVPWAGVAARVKE-----DAGAAAVRRGRAYCFLPLPVFTGLPVHVNGYFELSSNRR 405
BLAST of mRNA_M-pyrifera_M_contig7376.17479.1 vs. uniprot
Match: A0A7S0C3V6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3V6_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.650e-22 Identity = 48/86 (55.81%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 4 IREKWQVCNQLGGPRATAIAISERAAHMRLVPWAGVAARFSTTEEGGDAGGPKPPRGAAYCFLPLPVVTGLPVHVNGYFELSSNRQ 261 + EKW VCNQ G + ++ S +HM LVPWAGVAA+ T GAAYCFLPLPV TGLPVHVNGYFELSS+R+ Sbjct: 31 VTEKWIVCNQYGRGNVSRMSSSADHSHMELVPWAGVAAQLPTDTA---------TTGAAYCFLPLPVATGLPVHVNGYFELSSDRR 107
BLAST of mRNA_M-pyrifera_M_contig7376.17479.1 vs. uniprot
Match: A0A7S1TYE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYE3_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 3.050e-22 Identity = 56/101 (55.45%), Postives = 60/101 (59.41%), Query Frame = 1 Query: 1 AIREKWQVCNQLGGPRATAIAISERAAHMRLVPWAGVAARFST--------------TEEGGDAGGPKPPRGAAYCFLPLPVVTGLPVHVNGYFELSSNRQ 261 AIREKW VCNQ GG RA +A HM+LVPWAGVAAR +G DA G AYCFLPLPV TG PVHVNGYFELSSNR+ Sbjct: 315 AIREKWVVCNQFGGGRAAQMAADTSLEHMKLVPWAGVAARVGMHLPERGAAPWVAQWVPDGADAVAAP---GRAYCFLPLPVRTGFPVHVNGYFELSSNRR 412
BLAST of mRNA_M-pyrifera_M_contig7376.17479.1 vs. uniprot
Match: A0A7S3QAL4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QAL4_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.450e-21 Identity = 51/87 (58.62%), Postives = 60/87 (68.97%), Query Frame = 1 Query: 7 REKWQVCNQLGGPRATAIAISERAAHMRLVPWAGVAARFST--TEEGGDAGGPKPPRGAAYCFLPLPVVTGLPVHVNGYFELSSNRQ 261 +E+W VCNQLGG A+ +A + HM+LVPWAGVAAR S EGG+A YCFLPLPV T LP+HVNGYFELSSNR+ Sbjct: 318 KERWMVCNQLGGGNASIMARDKALDHMKLVPWAGVAARLSPDCNVEGGNA----------YCFLPLPVRTKLPIHVNGYFELSSNRR 394
BLAST of mRNA_M-pyrifera_M_contig7376.17479.1 vs. uniprot
Match: A0A7S2UB77_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB77_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.060e-20 Identity = 48/85 (56.47%), Postives = 57/85 (67.06%), Query Frame = 1 Query: 7 REKWQVCNQLGGPRATAIAISERAAHMRLVPWAGVAARFSTTEEGGDAGGPKPPRGAAYCFLPLPVVTGLPVHVNGYFELSSNRQ 261 +E+W VCNQLGG A+ +A +HM+L+PWAGVAAR S + GAAYCFLPLP T LP HVNGYFELSSNR+ Sbjct: 330 KERWIVCNQLGGGNASRMAQDPGLSHMKLIPWAGVAARLSPLVDDTSF------EGAAYCFLPLPAKTKLPCHVNGYFELSSNRR 408
BLAST of mRNA_M-pyrifera_M_contig7376.17479.1 vs. uniprot
Match: A0A7S4HJR0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HJR0_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.490e-20 Identity = 59/126 (46.83%), Postives = 67/126 (53.17%), Query Frame = 1 Query: 10 EKWQVCNQLGGPRATAIAISERAAHMRLVPWAGVAARF------------------STTEEGGDA------------------------GGPKPPRGAAYCFLPLPVVTGLPVHVNGYFELSSNRQ 261 E W VCNQLGG RA+ +A + A H+RLVPWAGVAAR +T +EG DA GP GAAYCFLPLPV TGLP+HVNGYFELSSNR+ Sbjct: 357 ETWMVCNQLGGGRASNMASDKAAEHLRLVPWAGVAARLDPPPVPCAEGDGGEADGGATMDEGMDAVEVVDGDGVIDDTQTEAGTGAASATGPSS-GGAAYCFLPLPVSTGLPIHVNGYFELSSNRR 481
BLAST of mRNA_M-pyrifera_M_contig7376.17479.1 vs. uniprot
Match: C1N0V2_MICPC (Predicted protein n=4 Tax=Micromonas pusilla TaxID=38833 RepID=C1N0V2_MICPC) HSP 1 Score: 93.2 bits (230), Expect = 3.260e-20 Identity = 48/85 (56.47%), Postives = 56/85 (65.88%), Query Frame = 1 Query: 7 REKWQVCNQLGGPRATAIAISERAAHMRLVPWAGVAARFSTTEEGGDAGGPKPPRGAAYCFLPLPVVTGLPVHVNGYFELSSNRQ 261 +E+W V + L G RA A+A+SE LVPW GVAAR E DA + G A+CFLPLPV TGLPVHVN YFELSSNR+ Sbjct: 1805 KERWMVSSSLAGGRARALALSEAGVTRGLVPWVGVAARVPHPETSDDATSSETVDGRAFCFLPLPVKTGLPVHVNAYFELSSNRR 1889
BLAST of mRNA_M-pyrifera_M_contig7376.17479.1 vs. uniprot
Match: A0A7S0CTG0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CTG0_9EUKA) HSP 1 Score: 90.5 bits (223), Expect = 4.800e-20 Identity = 47/86 (54.65%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 4 IREKWQVCNQLGGPRATAIAISERAAHMRLVPWAGVAARFSTTEEGGDAGGPKPPRGAAYCFLPLPVVTGLPVHVNGYFELSSNRQ 261 + EK+ + LGG RA A+A+ A +L+PWAG+AAR E G GP G+A+CFLPLPV TGLPVHVNGYFELS+NR+ Sbjct: 49 VSEKYLLFEMLGGDRARAMAVENSAKGHKLLPWAGIAARI---ERKGPEPGPTDIEGSAFCFLPLPVRTGLPVHVNGYFELSANRR 131
BLAST of mRNA_M-pyrifera_M_contig7376.17479.1 vs. uniprot
Match: A0A7S1GSX3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GSX3_HEMAN) HSP 1 Score: 90.9 bits (224), Expect = 1.950e-19 Identity = 49/88 (55.68%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 13 KWQVCNQLGGPRATAIAISERAAHMRLVPWAGVAARFST-----TEEGGDAGGPKPPRGAAYCFLPLPVVTGLPVHVNGYFELSSNRQ 261 +W V + +G RA IA+ + AH+RLVPWAGVAA S EEGG +G A+CFLPLP TGLPVHVNGYFELSSNR+ Sbjct: 435 RWAVSSAIGTGRAKEIAVHAKTAHLRLVPWAGVAAILSRECRTGNEEGGMV------KGRAFCFLPLPAETGLPVHVNGYFELSSNRR 516
BLAST of mRNA_M-pyrifera_M_contig7376.17479.1 vs. uniprot
Match: A0A5D6XM38_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XM38_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.110e-19 Identity = 46/84 (54.76%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 10 EKWQVCNQLGGPRATAIAISERAAHMRLVPWAGVAARFSTTEEGGDAGGPKPPRGAAYCFLPLPVVTGLPVHVNGYFELSSNRQ 261 EK+ VCNQLGG RA IA + ++L+PWAG+A R G P G A+CFLPLPV GLPVH+NGYFELSSNR+ Sbjct: 1827 EKYLVCNQLGGGRAREIACAAENESLKLIPWAGIAGRI----------GVAPAEGRAFCFLPLPVKVGLPVHINGYFELSSNRR 1900 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7376.17479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7376.17479.1 >prot_M-pyrifera_M_contig7376.17479.1 ID=prot_M-pyrifera_M_contig7376.17479.1|Name=mRNA_M-pyrifera_M_contig7376.17479.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=87bp AIREKWQVCNQLGGPRATAIAISERAAHMRLVPWAGVAARFSTTEEGGDAback to top mRNA from alignment at M-pyrifera_M_contig7376:512..772- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7376.17479.1 ID=mRNA_M-pyrifera_M_contig7376.17479.1|Name=mRNA_M-pyrifera_M_contig7376.17479.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=261bp|location=Sequence derived from alignment at M-pyrifera_M_contig7376:512..772- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7376:512..772- >mRNA_M-pyrifera_M_contig7376.17479.1 ID=mRNA_M-pyrifera_M_contig7376.17479.1|Name=mRNA_M-pyrifera_M_contig7376.17479.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig7376:512..772- (Macrocystis pyrifera P11B4 male)back to top |