mRNA_M-pyrifera_M_contig73628.17449.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig73628.17449.1 vs. uniprot
Match: A0A5A8EBD2_CAFRO (Uncharacterized protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EBD2_CAFRO) HSP 1 Score: 181 bits (458), Expect = 7.560e-48 Identity = 118/279 (42.29%), Postives = 162/279 (58.06%), Query Frame = 1 Query: 4 LYSVALHPTGSTLLIGFESSLQLASLLMEDVRPVKDFPIRKCTTVRFANGGHLFAAGNGAAIHVYESLTGAAVTTLRGHTDRVLSLSWSGDDRFLVSCGRDGLVVRWHVRSG--RAAGQISYRDMSLTSVDAR-HSPAATNAVV--CGTDLHASRRSSLRVISFPDTEPGSMAITSGKVGGGMAALSRRGESPSTVSAVDLGSTVLSSIAVLPSALGLIASTKTPYSQGSILLTPWPIEEGDDVSVAWETVVSHQGPVTSITCTPDSRAVVSGGADGSI 825 +YS +LHP+G LL+GFES LQL +LLMED+RPVKD PIR+C + F+NGG LFAA NGA I V+ + T A V L+GHTD V +L+WS DD+FL+S D V RW VR+ R ++ RD+ +TS+ A + AT A+V G ++ S + I+FP E TS L+ G VSAV G++V+++ + LP G + S P+ G + T I+E VV H GPVT++ TPD+R VV+GG DGS+ Sbjct: 754 IYSASLHPSGLHLLVGFESGLQLMNLLMEDIRPVKDVPIRRCAALGFSNGGSLFAAANGANISVFSTYTTALVAKLQGHTDNVTALAWSPDDQFLISASADFTVRRWAVRANARREHNKVVLRDVVVTSLSAAMNGHDATGALVFAVGRNMRTPTESPVLGIAFPAAEGTGSVRTS---------LNMSGTQHKLVSAVAGGASVVTATS-LPGHKGTLRSLSAPFPAGEV--TAPTIQE----------VVCHSGPVTAMCVTPDARLVVTGGDDGSL 1010
BLAST of mRNA_M-pyrifera_M_contig73628.17449.1 vs. uniprot
Match: A0A5A8E612_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E612_CAFRO) HSP 1 Score: 147 bits (370), Expect = 1.780e-38 Identity = 101/252 (40.08%), Postives = 140/252 (55.56%), Query Frame = 1 Query: 85 MEDVRPVKDFPIRKCTTVRFANGGHLFAAGNGAAIHVYESLTGAAVTTLRGHTDRVLSLSWSGDDRFLVSCGRDGLVVRWHVRSG--RAAGQISYRDMSLTSVDAR-HSPAATNAVV--CGTDLHASRRSSLRVISFPDTEPGSMAITSGKVGGGMAALSRRGESPSTVSAVDLGSTVLSSIAVLPSALGLIASTKTPYSQGSILLTPWPIEEGDDVSVAWETVVSHQGPVTSITCTPDSRAVVSGGADGSI 825 MED+RPVKD PIR+C + F+NGG LFAA NGA I V+ + T A V L+GHTD V +L+WS DD+FL+S D V RW VR+ R ++ RD+ +TS+ A + AT A+V G ++ S + I+FP E TS L+ G VSAV G++V+++ + LP G + S P+ G + T I+E VV H GPVT++ TPD+R VV+GG DGS+ Sbjct: 1 MEDIRPVKDVPIRRCAALGFSNGGSLFAAANGANISVFSTYTTALVAKLQGHTDNVTALAWSPDDQFLISASADFTVRRWAVRANARREHNKVVLRDVVVTSLSAAMNGHDATGALVFAVGRNMRTPTESPVLGIAFPAAEGTGSVRTS---------LNMSGTQHKLVSAVAGGASVVTATS-LPGHKGTLRSLSAPFPAGEV--TAPTIQE----------VVCHSGPVTAMCVTPDARLVVTGGDDGSL 230
BLAST of mRNA_M-pyrifera_M_contig73628.17449.1 vs. uniprot
Match: F2U8Y7_SALR5 (WD repeat-containing protein 65 n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U8Y7_SALR5) HSP 1 Score: 129 bits (325), Expect = 3.780e-30 Identity = 91/279 (32.62%), Postives = 136/279 (48.75%), Query Frame = 1 Query: 1 DLYSVALHPTGSTLLIGFESSLQLASLLMEDVRPVKDFPIRKCTTVRFANGGHLFAAGNGAAIHVYESLTGAAVTTLRGHTDRVLSLSWSGDDRFLVSCGRDGLVVRWHVRSGRAAGQISYRDMSLTSVDARHSPAATNAVVCGTDLHASRRSSLRVISFPDTEPGSMAITSGKVGGGMAALSRRGESPSTVSAVDLGSTVLSSIAVLPSALGLIASTKTPYSQGSILLTPWPIEEGDDVSVAWETVVSHQGPVTSITCTPDSRAVVSGGADGSIHIYR 837 + +S+A+HP+G +L+GF L+L SLLM+D+ +K+F IR+C RF+NGGHLFAA G I +Y + T V +L+GH+ R+ S++WS DD +VS G DG V W R + + S T A AV G+D L+ I D E E P VSA VL+ + V S L+A+T +QGS+ P+E + W + +H G VT + +PD + + S G DG + +++ Sbjct: 378 EAHSIAIHPSGLFVLVGFGDKLRLMSLLMDDMHTIKEFSIRECKECRFSNGGHLFAAAQGNVIQIYSTWTFKPVGSLKGHSGRIRSITWSPDDTRIVSTGADGAVYEWSTLERRRINECVQKTCSYTGATLDPETGAIYAV--GSDKM------LKRIHNSDMEL---------------------EVP--VSARATSDLVLTQVIVSSSGKMLLAAT----AQGSVRSYKVPLE----LKAEWTSTCTHFGGVTRLRISPDDQTLFSVGEDGCLFLHK 617
BLAST of mRNA_M-pyrifera_M_contig73628.17449.1 vs. uniprot
Match: UPI001402C9AA (cilia- and flagella-associated protein 57 isoform X1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001402C9AA) HSP 1 Score: 129 bits (324), Expect = 5.190e-30 Identity = 61/129 (47.29%), Postives = 83/129 (64.34%), Query Frame = 1 Query: 1 DLYSVALHPTGSTLLIGFESSLQLASLLMEDVRPVKDFPIRKCTTVRFANGGHLFAAGNGAAIHVYESLTGAAVTTLRGHTDRVLSLSWSGDDRFLVSCGRDGLVVRWHVRSGRAAGQISYRDMSLTSV 387 + +SVALHP+G +L+GF L+L +LL+ DVRP++DFP+R C F+NGGHLFAA NG + V+ S+T V L+GH+ +V L+WS DD LVSCG DG V W SGR + + + T V Sbjct: 471 EAHSVALHPSGLQVLVGFSDKLRLLTLLLHDVRPLRDFPVRACKECCFSNGGHLFAAANGNVVQVFSSITFENVANLKGHSGKVRGLAWSVDDARLVSCGLDGAVYEWSPLSGRRDAECVVKACAYTGV 599
BLAST of mRNA_M-pyrifera_M_contig73628.17449.1 vs. uniprot
Match: A0A267FYC9_9PLAT (Uncharacterized protein (Fragment) n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267FYC9_9PLAT) HSP 1 Score: 129 bits (323), Expect = 6.700e-30 Identity = 88/282 (31.21%), Postives = 131/282 (46.45%), Query Frame = 1 Query: 1 DLYSVALHPTGSTLLIGFESSLQLASLLMEDVRPVKDFPIRKCTTVRFANGGHLFAAGNGAAIHVYESLTGAAVTTLRGHTDRVLSLSWSGDDRFLVSCGRDGLVVRWHVRSGRAAGQISYRDMSLTSVDARHSPAATNAVVCGTDLHASRRSSLRVISFPDTEPGSMAITSGKVGGGMAALSRRGESPSTVSAVDLGSTVLSSIAVLPSALGLIASTKTPYSQGSILLTPWPIEE---GDDVSVAWETVVSHQGPVTSITCTPDSRAVVSGGADGSIHIYR 837 + YSVALHP+G LL+GF L+L +LL++D+R K+F IR C F+NGGHLFAA +G I ++ +++ V +GH ++ L WS DD LVSCG DG V W V +G+ + + S T V A T AV G+D ++ D EP + A+D G +S+A+ S + A TK+ GS+ +P G W+ V +H G V + +V+ G DG + I++ Sbjct: 415 EAYSVALHPSGLFLLVGFSDKLRLMNLLIDDIRTFKEFTIRGCRECAFSNGGHLFAAVHGNIIQIFSTISFENVGNFKGHNGKIKGLVWSNDDSKLVSCGMDGAVYEWEVATGKRLREHVLKTCSYTGVAATADVKTTYAV--GSDG--------KLKEITDEEP--------------------------MPAIDAGEAEFTSLAMSNSGRMMFAGTKS----GSVRAIKFPFTAASVGGGAGSDWQEVAAHSGGVNKMRLVCTDEYMVTVGDDGCVLIWK 656
BLAST of mRNA_M-pyrifera_M_contig73628.17449.1 vs. uniprot
Match: A0A1I8GFC8_9PLAT (Uncharacterized protein n=5 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8GFC8_9PLAT) HSP 1 Score: 129 bits (323), Expect = 6.940e-30 Identity = 88/282 (31.21%), Postives = 131/282 (46.45%), Query Frame = 1 Query: 1 DLYSVALHPTGSTLLIGFESSLQLASLLMEDVRPVKDFPIRKCTTVRFANGGHLFAAGNGAAIHVYESLTGAAVTTLRGHTDRVLSLSWSGDDRFLVSCGRDGLVVRWHVRSGRAAGQISYRDMSLTSVDARHSPAATNAVVCGTDLHASRRSSLRVISFPDTEPGSMAITSGKVGGGMAALSRRGESPSTVSAVDLGSTVLSSIAVLPSALGLIASTKTPYSQGSILLTPWPIEE---GDDVSVAWETVVSHQGPVTSITCTPDSRAVVSGGADGSIHIYR 837 + YSVALHP+G LL+GF L+L +LL++D+R K+F IR C F+NGGHLFAA +G I ++ +++ V +GH ++ L WS DD LVSCG DG V W V +G+ + + S T V A T AV G+D ++ D EP + A+D G +S+A+ S + A TK+ GS+ +P G W+ V +H G V + +V+ G DG + I++ Sbjct: 407 EAYSVALHPSGLFLLVGFSDKLRLMNLLIDDIRTFKEFTIRGCRECAFSNGGHLFAAVHGNIIQIFSTISFENVGNFKGHNGKIKGLVWSNDDSKLVSCGMDGAVYEWEVATGKRLREHVLKTCSYTGVAATADVKTTYAV--GSDG--------KLKEITDEEP--------------------------MPAIDAGEAEFTSLAMSNSGRMMFAGTKS----GSVRAIKFPFTAASVGGGAGSDWQEVAAHSGGVNKMRLVCTDEYMVTVGDDGCVLIWK 648
BLAST of mRNA_M-pyrifera_M_contig73628.17449.1 vs. uniprot
Match: A0A7M7PIU5_STRPU (Uncharacterized protein n=3 Tax=Echinacea TaxID=7674 RepID=A0A7M7PIU5_STRPU) HSP 1 Score: 127 bits (319), Expect = 2.370e-29 Identity = 61/141 (43.26%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 1 DLYSVALHPTGSTLLIGFESSLQLASLLMEDVRPVKDFPIRKCTTVRFANGGHLFAAGNGAAIHVYESLTGAAVTTLRGHTDRVLSLSWSGDDRFLVSCGRDGLVVRWHVRSGRAAGQISYRDMSLTSVDARHSPAATNAV 423 + YS+ALHP+G +L+GF L+L +LL++D++ K+FPIR C F+NGGHLFAA +G I +Y S T V+ L+GH +V S+ WS DD ++SCG DG V W+ SG+ G+ + S T V + T AV Sbjct: 410 EAYSIALHPSGLYILVGFSDKLRLMNLLIDDIKKFKEFPIRGCRECSFSNGGHLFAAVHGNVIQIYSSTTFENVSNLKGHNGKVRSVIWSSDDSKIISCGMDGAVYEWNAFSGKREGESVLKSCSYTCVTSSPDGKVTFAV 550
BLAST of mRNA_M-pyrifera_M_contig73628.17449.1 vs. uniprot
Match: A0A3B4CKV7_PYGNA (Cilia and flagella associated protein 57 n=3 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4CKV7_PYGNA) HSP 1 Score: 127 bits (318), Expect = 3.220e-29 Identity = 56/129 (43.41%), Postives = 83/129 (64.34%), Query Frame = 1 Query: 1 DLYSVALHPTGSTLLIGFESSLQLASLLMEDVRPVKDFPIRKCTTVRFANGGHLFAAGNGAAIHVYESLTGAAVTTLRGHTDRVLSLSWSGDDRFLVSCGRDGLVVRWHVRSGRAAGQISYRDMSLTSV 387 +LYSVALHP+G +++GF ++L +LL +D+R K+F +R C F++GGH+FAA NG IH+Y + T ++ L+GH +V S++WS DD LVSCG DG V W+ SG+ + + S T V Sbjct: 408 ELYSVALHPSGLFIVVGFSDKIRLMNLLTDDIRTFKEFTVRGCRECAFSHGGHMFAAVNGNVIHIYSTTTFNSILNLKGHNGKVRSIAWSADDSHLVSCGMDGAVYEWNTLSGKRESESVLKSCSYTGV 536
BLAST of mRNA_M-pyrifera_M_contig73628.17449.1 vs. uniprot
Match: D0NG71_PHYIT (WD domain-containing protein, putative n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NG71_PHYIT) HSP 1 Score: 127 bits (318), Expect = 3.260e-29 Identity = 62/146 (42.47%), Postives = 89/146 (60.96%), Query Frame = 1 Query: 1 DLYSVALHPTGSTLLIGFESSLQLASLLMEDVRPVKDFPIRKCTTVRFANGGHLFAAGNGAAIHVYESLTGAAVTTLRGHTDRVLSLSWSGDDRFLVSCGRDGLVVRWHVRSGRAAGQISYRDMSLTSVDARHSPAATNAVVCGTD 438 D VA HP+G + +GF L+L ++LM+D+R ++F I+ C VRF+NGG FAA N +HVY + TG V+ LRGH++RV ++SW DR L++CG DG V+ W +RS AG + + +DA SP A V G+D Sbjct: 400 DALCVAFHPSGLHVAVGFTDKLRLLNVLMDDIRSCREFTIKGCREVRFSNGGQFFAAANNNVVHVYATYTGELVSVLRGHSNRVTAISWKSGDRKLLTCGADGTVLLWSLRSASKAGD-GHSQARCSYIDAALSPEGDVAYVTGSD 544
BLAST of mRNA_M-pyrifera_M_contig73628.17449.1 vs. uniprot
Match: A0A667XCB5_9TELE (Cilia and flagella associated protein 57 n=2 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667XCB5_9TELE) HSP 1 Score: 126 bits (317), Expect = 4.320e-29 Identity = 63/146 (43.15%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 1 DLYSVALHPTGSTLLIGFESSLQLASLLMEDVRPVKDFPIRKCTTVRFANGGHLFAAGNGAAIHVYESLTGAAVTTLRGHTDRVLSLSWSGDDRFLVSCGRDGLVVRWHVRSGRAAGQISYRDMSLTSVDARHSPAATNAVVCGTD 438 + YSVALHP+G +L+GF L++ +LL++D+R + +F +R C F++GGHLFAA NG IH+Y T V L+GH +V S+ WS DD LVSCG DG V W+ +GR + + + T D SP A V GTD Sbjct: 394 EAYSVALHPSGLFILVGFTDKLRMMNLLIDDIRTINEFSVRGCRECAFSHGGHLFAAVNGNVIHIYSVTTFENVLNLKGHRGKVQSVRWSLDDSRLVSCGMDGAVYEWNTHTGRRESECVLKSCNYT--DVAFSPDARAVVAVGTD 537 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73628.17449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig73628.17449.1 >prot_M-pyrifera_M_contig73628.17449.1 ID=prot_M-pyrifera_M_contig73628.17449.1|Name=mRNA_M-pyrifera_M_contig73628.17449.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=279bp DLYSVALHPTGSTLLIGFESSLQLASLLMEDVRPVKDFPIRKCTTVRFANback to top mRNA from alignment at M-pyrifera_M_contig73628:118..954+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig73628.17449.1 ID=mRNA_M-pyrifera_M_contig73628.17449.1|Name=mRNA_M-pyrifera_M_contig73628.17449.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=837bp|location=Sequence derived from alignment at M-pyrifera_M_contig73628:118..954+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig73628:118..954+ >mRNA_M-pyrifera_M_contig73628.17449.1 ID=mRNA_M-pyrifera_M_contig73628.17449.1|Name=mRNA_M-pyrifera_M_contig73628.17449.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1674bp|location=Sequence derived from alignment at M-pyrifera_M_contig73628:118..954+ (Macrocystis pyrifera P11B4 male)back to top |