mRNA_M-pyrifera_M_contig7343.17412.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7343.17412.1
Unique NamemRNA_M-pyrifera_M_contig7343.17412.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig7343.17412.1 vs. uniprot
Match: D8LN71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN71_ECTSI)

HSP 1 Score: 389 bits (998), Expect = 7.870e-119
Identity = 331/641 (51.64%), Postives = 352/641 (54.91%), Query Frame = 1 
Query:    1 VFLESVLLEIRSNDWKRAAMEAQAALKVHSGAGRLWAVLVQLKQRDSDEAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLLKDLFLPRAQAIADARESRSAPPAAPTAAATTLELPGSTVAPTVTPXXISXXXXXXXXXXXXXXXXXXXSSTAMAAAAVAPTSSVESPPPRCERTTARPGESRKGKGMGNQDALLGSSTVAGSGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREDPEVARPSTALSAHGDVDRRHAPSSEASSCPLLTFEAWAAIDAGKPAADSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDARKGXSGGRGDXXXXXXXXXXXGDGGEVSP---PPCRFELSEKEMEAAGRLSEVDFLRAEVEGLVLRCVNADPNYGSMWFHCRHRPSDTAKSILTMAKVMMADELTTLQDIYLNAVTRHVLLQREADAYIAATTAAAAEGGNASQGGEGREGRDTPRRR----TXXXXXXXTRKREGKEERRDRLLAVAARIAPGVAFARPEGS-LKGIR-------------------------AEDFVTGLASLNRITAQMGRLRSEDRRKILFGSDQIVP 1824
            VFLESVLLEIR+NDW+RAA EAQ ALKVHSGAGRLWAVLVQLKQRDSD+AQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLL D+FLP+A+AIADARE                             XX  XXXXXXXXXXXXXXX    S  A               P R ER      E  +G     ++A   +   AG G                                 +    ARP       GD         +       T  A AA+D GK      XXXXXXXXXXXXXXX                                                       E SP   P  RFEL E E+ AAGRLS  DFLRAEVEGLVLRCVNADPNYGSMWFHCRHRPSDTAKSIL M+KVMMA+ELT LQD+YL+AVTRHVLLQREADAY+A+      E          R      R       XXXXXXX        ERR RLL VA R+AP V F    G  LK IR                         AEDFVTGLASLNRITAQMGRLRSEDRRKILFGSDQIVP
Sbjct:  633 VFLESVLLEIRANDWQRAATEAQEALKVHSGAGRLWAVLVQLKQRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLLNDIFLPKARAIADAREKXX-----------------------XXXXXXXXXXXXXXXXXXXXXXLLLPSEAAS--------------PGRVER------EGVEGMTTPVKEAPREAVKHAGGG-------------------------DGDSGGPADGTRAARPE------GD---------DVVDAVAATAVAVAAVD-GKQEXXXXXXXXXXXXXXXXXXXD------------------------------------------------------EPSPGRVPGGRFELGEDEVAAAGRLSPGDFLRAEVEGLVLRCVNADPNYGSMWFHCRHRPSDTAKSILMMSKVMMAEELTNLQDVYLHAVTRHVLLQREADAYLASRKPLEEETEGXXXXXSARXXXXXRRHHGGGVXXXXXXXXXXXXXXXAERRARLLEVAGRLAPPVGFGEEGGGGLKNIRGRNRPEVTIESPSVLGLLPFYPAAGAEDFVTGLASLNRITAQMGRLRSEDRRKILFGSDQIVP 1135
[Close]
BLAST of mRNA_M-pyrifera_M_contig7343.17412.1 vs. uniprot
Match: A0A6H5KEQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEQ7_9PHAE)

HSP 1 Score: 385 bits (990), Expect = 3.830e-116
Identity = 385/682 (56.45%), Postives = 412/682 (60.41%), Query Frame = 1 
Query:    1 VFLESVLLEIRSNDWKRAAMEAQAALKVHSGAGRLWAVLVQLKQRDSDEAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLLKDLFLPRAQAIADARESRSAPPAAPTAAATTLELPGSTVAPTVTPXXISXXXXXXXXXXXXXXXXXXXSSTAMAAAAVAPTSSVESPPPRCERT------------------TARPGESRKG---KGMGNQDALLGSSTVAGSGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREDPEVARPSTALSAHGDVDRRHAPSSEASSCPLLTFEAWAAIDAGKPAADSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDARKGXSGGRGDXXXXXXXXXXX----------------------------------------------------GDGGEVSPPPCRFELSEKEMEAAGRLSEVDFLRAEVEGLVLRCVNADPNYGSMWFHCRHRPSDTAKSILTMAKVMMADELTTLQDIYLNAVTRHVLLQREADAYIAATTAAAAEGGNASQGGEGREGRDTPRRRTXXXXXXXTRKREGKEERRDRLLAVAARIAPGVAFARPEGS-LKGIRAEDFVTGLASLNRITAQMGRLRSEDRRKILFGSDQIVP 1824
            VFLESVLLEIR+NDW+RAA EAQ ALKVHSGAGRLWAVLVQLKQRDSD+AQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLL DLFLP+A+AIADARE                                 XXXXXXXXXXXXXXX    SS A++ A V     +E  P   E                    +  P +  +    +G    DA+  ++    +       XXXXXXXXXXXXXXXXXXXXXXXXXX              A GD               LL  + WAAID G  A        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   + G   G  D XXXXXXXXXX                                                    GDG     P   FEL E E+ AAGRLS  DFLRAEVEGLVLRCVNADPNYGSMWFHCRHRPSDTAKSIL M+KVMMA+ELT LQD+YL+AVTRHVLLQREADAY+A+               +  E         XXXXXXX            RLL V  R+AP V F    G  LK IRAEDFVTGLASLNRITAQMGRLRSEDRRKILFGSDQIVP
Sbjct:  738 VFLESVLLEIRANDWQRAAAEAQEALKVHSGAGRLWAVLVQLKQRDSDQAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLLNDLFLPKARAIADAREKXX----------------------------XXXXXXXXXXXXXXXXXPLLLSSEAVSPARVERRKGIEGMPTPVEEAPRDAVKHAGGGXXXXXXXSGGPADGTRTAGPEGCDGVDAVAATAVAVAAVDGGKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGDRSW------------LLPPQVWAAIDRGDFATTLHPGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTQGGDVRGSVDDXXXXXXXXXXAASPPCANPSSWTASTXXXXXXXXXXXXXXXXXXXXXXXXXXXVGADASSAPGDGIVGGVPGGWFELGEDEVAAAGRLSPGDFLRAEVEGLVLRCVNADPNYGSMWFHCRHRPSDTAKSILMMSKVMMAEELTNLQDVYLHAVTRHVLLQREADAYLASW--------------KHPEEETEXXXXXXXXXXXXXXXXXXXXXXXARLLEVGGRLAPPVGFGEEGGGGLKNIRAEDFVTGLASLNRITAQMGRLRSEDRRKILFGSDQIVP 1365
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BLAST of mRNA_M-pyrifera_M_contig7343.17412.1 vs. uniprot
Match: A0A4D9D155_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D155_9STRA)

HSP 1 Score: 155 bits (392), Expect = 7.240e-36
Identity = 79/127 (62.20%), Postives = 99/127 (77.95%), Query Frame = 1 
Query:    1 VFLESVLLEIRSNDWKRAAMEAQAALKVHSGAGRLWAVLVQLKQRDSDEAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLLKDLFLPRAQAI 381
            VFLESVLLE+R+ +W RA  +A++AL VH+G GRLWA+LVQL+       Q   L+QAL EVPKSGEVWCEGARIHL+P+S  FDLE A +YL FA+QFTPQYGDSF+E LRL L++ +  P A++I
Sbjct: 1375 VFLESVLLEMRAGEWARAIDQARSALSVHTGTGRLWAILVQLRYLGGAGEQVRVLRQALSEVPKSGEVWCEGARIHLSPVSFNFDLELAQRYLDFAIQFTPQYGDSFLELLRLTLVRQVIEPVARSI 1501
[Close]
BLAST of mRNA_M-pyrifera_M_contig7343.17412.1 vs. uniprot
Match: W7TFT0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFT0_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.190e-35
Identity = 78/127 (61.42%), Postives = 99/127 (77.95%), Query Frame = 1 
Query:    1 VFLESVLLEIRSNDWKRAAMEAQAALKVHSGAGRLWAVLVQLKQRDSDEAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLLKDLFLPRAQAI 381
            VFLESVLLE+R+ +W RA  +A++AL VH+G GRLWA+LVQL+       Q   L+QAL EVPKSGEVWCEGARIHL+P+S  FDLE A +YL FA+QFTPQYGDSF+E LRL L++ +  P A+++
Sbjct: 1025 VFLESVLLEMRAGEWVRAIDQARSALSVHTGTGRLWAILVQLRYLGGAGEQVRVLRQALSEVPKSGEVWCEGARIHLSPVSFNFDLELAQRYLDFAIQFTPQYGDSFLELLRLTLVRQVIEPVARSV 1151
[Close]
BLAST of mRNA_M-pyrifera_M_contig7343.17412.1 vs. uniprot
Match: A0A6S8EA78_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EA78_9STRA)

HSP 1 Score: 150 bits (378), Expect = 3.210e-34
Identity = 73/117 (62.39%), Postives = 92/117 (78.63%), Query Frame = 1 
Query:    1 VFLESVLLEIRSNDWKRAAMEAQAALKVHSGAGRLWAVLVQLKQRDSDEAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLLK 351
            VFLESV+LE+R  +   A  EA++AL++HSG GRLWA+LVQL      + Q+   ++ALK+VPKSGEVWCEGAR+HL+PLS  FDLETA +YL FA+QFTPQYGDSF+E LR  LL+
Sbjct:  795 VFLESVMLEVRCGNRDGALKEAKSALEIHSGTGRLWAILVQLTHAHGPDQQRLVFREALKQVPKSGEVWCEGARVHLHPLSPHFDLETASRYLEFAIQFTPQYGDSFVEALRFHLLR 911
[Close]
BLAST of mRNA_M-pyrifera_M_contig7343.17412.1 vs. uniprot
Match: A0A7S1KQ47_9EUKA (Hypothetical protein n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KQ47_9EUKA)

HSP 1 Score: 149 bits (375), Expect = 7.820e-34
Identity = 75/116 (64.66%), Postives = 92/116 (79.31%), Query Frame = 1 
Query:    1 VFLESVLLEIRSNDWKRAAMEAQAALKVHSGAGRLWAVLVQLKQRDSDEAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLL 348
            VFLES+LLE+R+N+ ++A  EA+ AL++H G GRLWAVL+QLKQ D  + Q    +QAL EVPKSGEVWCEGARI LNPLS  F+L+ A  YL FA++FTPQYGDSF+E LRL LL
Sbjct:  884 VFLESILLEMRANNTRQAIKEAEEALEIHRGTGRLWAVLIQLKQCDGPDEQIKIFRQALVEVPKSGEVWCEGARIRLNPLSPKFNLDKARDYLNFAIKFTPQYGDSFIEYLRLELL 999
[Close]
BLAST of mRNA_M-pyrifera_M_contig7343.17412.1 vs. uniprot
Match: A0A7S1CM51_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CM51_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.180e-33
Identity = 78/135 (57.78%), Postives = 97/135 (71.85%), Query Frame = 1 
Query:    1 VFLESVLLEIRSNDWKRAAMEAQAALKVHSGAGRLWAVLVQLKQRDSDEAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLLKDLFLPRAQAIADARESRS 405
            VFLE+VLLE R+     A  +A  AL+VHSG GRLWAVLVQL++ D D+AQ    + AL +VPKSGEVWCEGARI L+P S+ FDL +A  +L FAVQFTPQYGDSF+E +R+ LL+      A A A +R SR+
Sbjct:   70 VFLEAVLLERRAGRRDAAIAQATRALEVHSGTGRLWAVLVQLRRADGDDAQLKVFRHALMQVPKSGEVWCEGARILLHPKSRHFDLTSARSFLDFAVQFTPQYGDSFIELVRVQLLR-----AALAFAVSRASRA 199
[Close]
BLAST of mRNA_M-pyrifera_M_contig7343.17412.1 vs. uniprot
Match: A0A7R9UFL8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFL8_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.440e-33
Identity = 71/124 (57.26%), Postives = 93/124 (75.00%), Query Frame = 1 
Query:    1 VFLESVLLEIRSNDWKRAAMEAQAALKVHSGAGRLWAVLVQLKQRDSDEAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLLKDLFLPRA 372
            +FLESV+LE+RS   + A ++A+ AL+VH G GRLWA L+ L+  D   AQ A  ++AL+EVPKSGEVW EGAR+HLNPLS+ FD E A ++L FA+ FTPQYGDSF+E +RL L+    LP+A
Sbjct:   76 IFLESVMLELRSGHIREATLQAETALEVHRGTGRLWAALITLRASDGVTAQAAVFRRALQEVPKSGEVWAEGARLHLNPLSQLFDPECAARFLEFAILFTPQYGDSFLELIRLRLVLRCLLPQA 199
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BLAST of mRNA_M-pyrifera_M_contig7343.17412.1 vs. uniprot
Match: A0A7S0PWJ1_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PWJ1_9STRA)

HSP 1 Score: 144 bits (362), Expect = 3.930e-32
Identity = 78/130 (60.00%), Postives = 94/130 (72.31%), Query Frame = 1 
Query:    1 VFLESVLLEIRSNDWKRAAMEAQAALKVHSGAGRLWAVLVQLKQRDSDEAQQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLLKDLFLPRAQAIADA 390
            V+LESVLLEIRS   +RA   A+ AL++HSG GRLWA LVQL   + D AQ +SL+ AL+ VPKSGEVWCEGARIHLNP S  FDLE A  +L FA +FTPQYGDSF+E L+  LL+    P A  + +A
Sbjct: 1072 VWLESVLLEIRSGKQRRAIDVAKRALEMHSGTGRLWASLVQLHHLEGDTAQCSSLRLALRVVPKSGEVWCEGARIHLNPFSSMFDLEKARSHLHFATKFTPQYGDSFLETLKFELLEKWIAPVATVLWEA 1201
[Close]
BLAST of mRNA_M-pyrifera_M_contig7343.17412.1 vs. uniprot
Match: D2V945_NAEGR (Uncharacterized protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V945_NAEGR)

HSP 1 Score: 143 bits (361), Expect = 4.310e-32
Identity = 75/117 (64.10%), Postives = 91/117 (77.78%), Query Frame = 1 
Query:    1 VFLESVLLEIRSNDWKRAAMEAQAALKVHSGAGRLWAVLVQLKQRDSDEAQQASL-KQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFTPQYGDSFMECLRLGLL 348
            VFLES+LLE+R+ D  +A  EA+ AL++H G GRLWAVL+QLK    D A+   + K+AL+EVPKSGEVWCEGARI LNPLS  F LE A +YL FA++FTPQYGDSF+E LRL LL
Sbjct:  801 VFLESILLEMRAGDTDKATNEAKEALEIHRGTGRLWAVLIQLKHMKGDIAECYQVFKEALEEVPKSGEVWCEGARIALNPLSPKFSLEKAKRYLNFAIKFTPQYGDSFIEYLRLELL 917
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7343.17412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN71_ECTSI7.870e-11951.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEQ7_9PHAE3.830e-11656.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9D155_9STRA7.240e-3662.20Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TFT0_9STRA1.190e-3561.42Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A6S8EA78_9STRA3.210e-3462.39Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S1KQ47_9EUKA7.820e-3464.66Hypothetical protein n=1 Tax=Percolomonas cosmopol... [more]
A0A7S1CM51_9STRA2.180e-3357.78Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7R9UFL8_9STRA2.440e-3357.26Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0PWJ1_9STRA3.930e-3260.00Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
D2V945_NAEGR4.310e-3264.10Uncharacterized protein n=1 Tax=Naegleria gruberi ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7343contigM-pyrifera_M_contig7343:6389..11794 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score393.7
Seed ortholog evalue1.6e-106
Seed eggNOG ortholog2880.D8LN71
Hectar predicted targeting categoryother localisation
EggNOG OGs28JG8@1,2QRVD@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1827
Cds size1827
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816631.6090393-CDS-M-pyrifera_M_contig7343:6388..65591622816631.6090393-CDS-M-pyrifera_M_contig7343:6388..6559Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7343 6389..6559 +
1692278088.1663067-CDS-M-pyrifera_M_contig7343:6388..65591692278088.1663067-CDS-M-pyrifera_M_contig7343:6388..6559Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7343 6389..6559 +
1622816631.619356-CDS-M-pyrifera_M_contig7343:7301..74651622816631.619356-CDS-M-pyrifera_M_contig7343:7301..7465Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7343 7302..7465 +
1692278088.1839643-CDS-M-pyrifera_M_contig7343:7301..74651692278088.1839643-CDS-M-pyrifera_M_contig7343:7301..7465Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7343 7302..7465 +
1622816631.6301725-CDS-M-pyrifera_M_contig7343:8365..88581622816631.6301725-CDS-M-pyrifera_M_contig7343:8365..8858Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7343 8366..8858 +
1692278088.193065-CDS-M-pyrifera_M_contig7343:8365..88581692278088.193065-CDS-M-pyrifera_M_contig7343:8365..8858Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7343 8366..8858 +
1622816631.6408355-CDS-M-pyrifera_M_contig7343:8921..90541622816631.6408355-CDS-M-pyrifera_M_contig7343:8921..9054Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7343 8922..9054 +
1692278088.2023027-CDS-M-pyrifera_M_contig7343:8921..90541692278088.2023027-CDS-M-pyrifera_M_contig7343:8921..9054Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7343 8922..9054 +
1622816631.6512961-CDS-M-pyrifera_M_contig7343:9156..95621622816631.6512961-CDS-M-pyrifera_M_contig7343:9156..9562Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7343 9157..9562 +
1692278088.218522-CDS-M-pyrifera_M_contig7343:9156..95621692278088.218522-CDS-M-pyrifera_M_contig7343:9156..9562Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7343 9157..9562 +
1622816631.6616611-CDS-M-pyrifera_M_contig7343:10932..112741622816631.6616611-CDS-M-pyrifera_M_contig7343:10932..11274Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7343 10933..11274 +
1692278088.2366583-CDS-M-pyrifera_M_contig7343:10932..112741692278088.2366583-CDS-M-pyrifera_M_contig7343:10932..11274Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7343 10933..11274 +
1622816631.6777987-CDS-M-pyrifera_M_contig7343:11676..117941622816631.6777987-CDS-M-pyrifera_M_contig7343:11676..11794Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7343 11677..11794 +
1692278088.248002-CDS-M-pyrifera_M_contig7343:11676..117941692278088.248002-CDS-M-pyrifera_M_contig7343:11676..11794Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7343 11677..11794 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7343.17412.1prot_M-pyrifera_M_contig7343.17412.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7343 6389..11794 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7343.17412.1

>prot_M-pyrifera_M_contig7343.17412.1 ID=prot_M-pyrifera_M_contig7343.17412.1|Name=mRNA_M-pyrifera_M_contig7343.17412.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=609bp
VFLESVLLEIRSNDWKRAAMEAQAALKVHSGAGRLWAVLVQLKQRDSDEA
QQASLKQALKEVPKSGEVWCEGARIHLNPLSKAFDLETAGKYLGFAVQFT
PQYGDSFMECLRLGLLKDLFLPRAQAIADARESRSAPPAAPTAAATTLEL
PGSTVAPTVTPTVISTVTPTVPSTVTPMITSTVTSSTAMAAAAVAPTSSV
ESPPPRCERTTARPGESRKGKGMGNQDALLGSSTVAGSGAEEAGGGVRGG
NTGGSAARATAAAAAAAAAAAREDPEVARPSTALSAHGDVDRRHAPSSEA
SSCPLLTFEAWAAIDAGKPAADSGGGGGGGGGGFGGGDKGGGHLVTVEAC
AEGSGALGGGGGGGGSDDARKGGSGGRGDGSRTDGGAVEGGDGGEVSPPP
CRFELSEKEMEAAGRLSEVDFLRAEVEGLVLRCVNADPNYGSMWFHCRHR
PSDTAKSILTMAKVMMADELTTLQDIYLNAVTRHVLLQREADAYIAATTA
AAAEGGNASQGGEGREGRDTPRRRTGGGGSRATRKREGKEERRDRLLAVA
ARIAPGVAFARPEGSLKGIRAEDFVTGLASLNRITAQMGRLRSEDRRKIL
FGSDQIVP*
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mRNA from alignment at M-pyrifera_M_contig7343:6389..11794+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7343.17412.1 ID=mRNA_M-pyrifera_M_contig7343.17412.1|Name=mRNA_M-pyrifera_M_contig7343.17412.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5406bp|location=Sequence derived from alignment at M-pyrifera_M_contig7343:6389..11794+ (Macrocystis pyrifera P11B4 male)
GTGTTCCTGGAGAGTGTCCTGCTCGAAATCCGGTCAAACGACTGGAAGAG
GGCAGCGATGGAGGCTCAGGCGGCTCTGAAGGTGCACTCTGGCGCGGGTA
GGCTGTGGGCGGTGCTGGTGCAGCTCAAGCAGAGGGACAGCGACGAGGCC
CAGCAGGCGTCGCTCAAGCAGGTGGGTCGCTCAATATCGTACTGTAGGTA
GAGCAGCGCGTTGTAGGTGGCGCATTTCCCCATCCGTTTCTGTCCCGAGA
TATGAAGACGGTTTTGGATAAAACATGTTGAGTGTACGAGGTGTACGAGA
TGGTAATATGTAAGCGTCTGGGATACGTAGGAGACAGCAGGCATGTTTCT
CCCGGGGACAATTCAGATGTTTCCAGGAGGGTGCCCTACAATAATTATAC
CTGGTATGTTCTATTATCCACTGCTTGTCTGCATGCGCCCTTCCTGTCCC
GGCAACGTGAGTGCCCATCTATGAACCCATCCCGGCGCGGTTCACCACTT
ACTTTCCTACTCATGTTTACTATAAAAACTGTCCTTGCTCATATTTGGAG
ACACAGTGATTGCTCGTATTGTTAATGGTGTTGCTTTCAGCGAAAACCTG
GTGACACATGGTGGAAAAAACGAAAAGACAAACAACAGGACAAGCAAAAA
TAACGGGTACAGAGAAACTGGTCTGCTGTGCCGGTTTGGCTTACTGGACC
TCCGCCTACTAATGCTATGCCACCTACATTGCCTCCAGCTGCTCCTCCCA
ATATATCAACTATCACTAGTATAGTATACCCGGAAGGTATGTATCGTATG
TCGGTCTAGACTGATAACGTGCCACCGATGGGGTCTCCTGCTGTGCCCCC
CTGCGGTTGCTCCCGATATGCCACCGAATATGCCACCGACTGTGCCGTGT
ATGCTGTTGCCAGGCGCTGAAGGAAGTGCCGAAGTCGGGGGAGGTGTGGT
GCGAGGGGGCGAGGATACACCTCAACCCGCTGTCGAAAGCTTTCGACCTC
GAGACGGCTGGGAAGTACCTTGGCTTCGCGGTGCAGTTCACCCCGCAGTA
CGGCGACTCTTTCATGGAGTGCCTCAGGTAAACTATTCACACCTCAAACA
GATCAGATATATCGTCTACATATCAGATAGATGATCTACAGTTACGTTAT
GTAGATCATCTACTTTCAGTTCTTCACCTGCCGCTGTGAGAGGTTCTGAG
GGATCTGCGCACGTAGTACAGATCCAACCCAGGATGCTAGATCATGAAGA
TTATACGGATCCCACTCGGCAACATGAGCTAGATCATACAGCTAGATCAT
ACAGATCATACAATATCGGGAACAGATATATCTGCCTTGAAAGATCTAGG
TCATGAACTGTGGGAATGATCTGTATGATATGTTCGAGCGCGCGCGCTAT
ATTGAACGTGTATGTACGCGAATCGATCAGGGGAGTGTGTCTTGGGGCAA
GGTTGGGGACCCACGCTACGCCGCACCAGGTACCTGGTACCAGTTCCGTA
GGCCAATCAATTTGTTGGAGAGTGGCTGAGGTACCTGGTACCTAGTCCGC
AGGCCGCTCGATTGTTGGAGCGTGGTTTAGGCAGGCAAGATAGAGGCCGC
AAGCTCCGAGTATGGTGCACGCGAATCTACCGGAGCAAACGAGAAAAACA
TGGCCATGAACACGCGCTAGGAACGCAGTGCACTACTCGAGCGGCGAGTT
GAACATCAACAGCAACACCAGTTAAGGCAATCTCCCCTTCCTTCACCAGA
CGAGAATACGAGAAAACGAATAGCAGTGCCGTGGATGTGAGCTACGGCAG
AAGCGCAGTTCACTGCTCAAGCAGCGAGTGGAACAACAACCACAGCACCA
GCACCGATTAACATGAGGTATCTTCCTTCCTTCTGTTCCTCGTTTCCCTC
CCCTTCGTTCTCGTGTTGTGTCTGGTGCCTTGTGGACTCGACCCATGTCG
TGTGGCTCCCTTCATCCGCTCGCCCAGGCTGGGTCTCCTGAAGGACCTCT
TCTTGCCGAGGGCGCAAGCGATCGCCGACGCGAGGGAGAGCCGATCCGCC
CCTCCAGCCGCCCCCACCGCAGCCGCCACGACGTTAGAGTTGCCTGGATC
GACGGTAGCACCAACGGTAACACCAACGGTAATATCGACGGTAACCCCAA
CGGTGCCATCAACGGTAACACCAATGATAACGTCAACGGTAACATCATCA
ACCGCGATGGCGGCGGCAGCGGTAGCACCCACGTCGTCGGTGGAGTCTCC
TCCCCCTCGATGCGAGCGGACAACGGCCCGCCCCGGTGAAAGCAGAAAGG
GGAAGGGGATGGGCAATCAGGATGCGCTTCTTGGGAGTAGCACGGTGGCC
GGCTCTGGAGCGGAAGAGGCTGGTGGTGGTGTTCGTGGTGGCAATACTGG
TGGCAGTGCTGCACGTGCTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTAGGGAGGATCCCGAGGTCAATTCCCCCGCCGAGCTTCGGTCGGCA
ACGTCTCCACACGGCACCCCGCCGCCACCTCAGGTAGCCCGCCCATCCAC
GGCACTCTCAGCCCACGGGGACGTCGACAGAAGGCATGCCCCCTCGTCCG
AGGCGTCATCGTGTCCCCTGCTAACTTTCGAGGCCTGGGCGGCGATCGAC
GCGGGAAAGCCCGCGGGTACCGATAAGTCCCACGCTTCCGCGCAGCCCCC
TTCCTCTAGCGGCGTAATTGCGCCTGCGCCTGCGCCTGCGCCTATGGCGG
CGTCTCCGGCGGTAGCAGCAGACAGCGGCGGTGGCGGCGGTGGCGGCGGA
GGTGGCTTCGGCGGGGGTGATAAGGGTGGAGGACATTTAGTGACGGTCGA
GGCTTGCGCTGAGGGCAGTGGAGCGCTAGGAGGAGGAGGAGGAGGAGGAG
GGAGTGATGACGCGCGTAAGGGCGGCTCCGGCGGGCGCGGCGACGGTAGT
CGTACAGACGGAGGCGCGGTGGAAGGAGGGGATGGCGGGGAAGTGTCCCC
TCCCCCTTGTCGCTTCGAGCTGAGCGAGAAGGAAATGGAGGCGGCCGGGC
GATTGAGCGAGGTAGACTTTTTGAGGGCGGAGGTGGAGGGGCTGGTGCTG
AGATGCGTCAACGCGGACCCGAATTACGGCTCCATGTGGTTCCACTGCCG
GCATCGACCTTCGGACACGGCCAAGTAAGTTACTTGTTTTGTTTCTCATT
CCTTGATGCATACTCGGGATTAGGGCCGGCCCTTTTGCCCCAAGGGCGCA
GGAACCATACTTTCGAACTAGAGTATCAATTCGTGCAGTATAGATGGAAT
AAATGGCCATAGTGCACAGTTTAGCCTATTTTCTGCCGTAGACCCTGTTG
CTTGCGGTGTTCTCCGTGGCTCTCGCACGAGGTGTGCTATTCGACACTGC
GTCCTGAGCATAACCCTTTAAATAACCGGTCGACATCCTGTTTTAGCTAA
AATAGATAAGCATGATACCATTTTGTCTGTCCCTGCCCTGTGTGCCGTTT
TTTTTTTCGTTTTGTAATCCGTGTCATCGTCTGAATCCGACGGTCCCGTC
ATGCGATACCGACGACTAATTCTCTCTTTCTCTCTCTGTCGTCCCGTCCC
CTGGTCGGAAATCCGTTTCGCATCGTATCGCGAACCGTTACACTCATCGA
ATCGTCATATTCATCGGACGAATAATACACCCTTTTCACCGTCCACAGTA
CCAGGTAGATATTTTGGGGGGAGATATAAATGGACCCCTGGTTTATATGA
TCAGCATGATTATCTGTAGATGCTCTATAAAACGGCTCTTGCAAACGCTT
CCCGGATGGGCGTCTGTATGGCCCGACTCTTGTATTTTGAGACATCTCCT
AACGGCAAAACATAACTATACATATATGATCTATATGGTCTGCATGATCT
TTATGGTTTATATTATTTATGTGATCTATAAGATCGACATGGTCTATGTG
ATCTATGTGATCTATATGATCTATATGGTCTATTTGATCTATTTGATCTA
TATTATCTATAGTAGACCGTGATGAGTCCGACGTGAAAAGTCCACATCCT
ACGTTTCCATCCGTATTCAAGAATTTCCGCCTCACAACCGGTCCTTAGGC
CCTCAGTAGGATGCAGCTCACTGCCCCTCTTCATGCATCTGGCCGAACAC
CTCACGGCTCTTCGCGCTTGGTGCCTTGGTGCAAGCAATGTCTGCCTGGT
CGGTGAAAACCCGACGTGCTCCGTCCCGGCATTGTACTCGTAGGGATGCG
AGGGTCTACGGTCATACCACTACGGCCATGCATGCATGACATGAGATGAG
CACGCACACCCCTTATACTGAGCACCACGAACCGCGGACAAGGGTGACCA
CATAGCGAGCATTTTCGTTGGGTTTCTTAGGGCTGGCGCTAGCGGCGGAA
TTCCATGCCGAGAAGCCCTTATCGAATCGCATCGCTCAATTTCAACGTTC
TCGCCCCCCCTCCCCGCCCCCCGTGCTACGCCCGTGTGTCGCGTTTGTCA
CCTTGTCCAAACGTGAAAACGCGCGTGGGCGCACTCGGTTTTAGGTCCAT
CCTGACCATGGCGAAAGTGATGATGGCTGACGAGCTCACCACGCTGCAGG
ACATCTACCTCAACGCTGTCACGCGCCACGTCCTACTCCAGAGAGAAGCG
GACGCCTACATCGCTGCAACCACTGCTGCCGCGGCGGAGGGCGGCAACGC
CTCCCAAGGTGGTGAGGGGAGGGAGGGGAGGGACACACCTCGACGGCGAA
CAGGAGGAGGAGGGTCGAGGGCTACCAGGAAGCGGGAGGGGAAGGAGGAA
AGGCGAGACCGCTTGTTGGCGGTAGCGGCTAGGATAGCTCCTGGGGTGGC
GTTCGCTCGTCCGGAAGGAAGCCTCAAGGGCATCAGGTAATAATGGAGTG
TGCTGGGTGTTGCGTCGGCGAGTTTGTTGCGGGAGTTTGTAGTGTGTTGT
GGGGATGTCGTGAGTGTGTTGGGGTGTTGGGTGTTTTTGTGGTGTATGTG
TTTTTGTGTCTTGGTGTATTGTGGCAATATATTGGTGGTGTTTTTGTTTG
CTGGTTGTTGTTGTTGATGTTGTGTGTGTTCGTTGGCTCGTTGATGTTAT
GCTACTTGGTCCGCGCTGACTACGTACCCAGATTGTCCGGTTTAGTCCCG
TTCAAGAGACAAGCAGCCGAGCGTGACACCTGTTCCGCGTCCTGCCTCCT
TAAAGTCCGCTGCTCTTATTAACCTCCCGCCGTGGCCGCATGTCCGTCGT
CTTCGTCCGTGCGTTCGTCCGTGCTCGTCGTGTGACAGGGCGGAGGATTT
CGTGACGGGTTTGGCGAGCCTCAACCGAATCACGGCACAGATGGGCCGTC
TTCGCAGCGAGGACCGCCGCAAGATTCTGTTCGGATCCGACCAAATCGTG
CCTTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7343:6389..11794+

>mRNA_M-pyrifera_M_contig7343.17412.1 ID=mRNA_M-pyrifera_M_contig7343.17412.1|Name=mRNA_M-pyrifera_M_contig7343.17412.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3654bp|location=Sequence derived from alignment at M-pyrifera_M_contig7343:6389..11794+ (Macrocystis pyrifera P11B4 male)
GTGTTCCTGGAGAGTGTCCTGCTCGAAATCCGGTCAAACGACTGGAAGAG
GGCAGCGATGGAGGCTCAGGCGGCTCTGAAGGTGCACTCTGGCGCGGGTA
GGCTGTGGGCGGTGCTGGTGCAGCTCAAGCAGAGGGACAGCGACGAGGCC
CAGCAGGCGTCGCTCAAGCAGGTGTTCCTGGAGAGTGTCCTGCTCGAAAT
CCGGTCAAACGACTGGAAGAGGGCAGCGATGGAGGCTCAGGCGGCTCTGA
AGGTGCACTCTGGCGCGGGTAGGCTGTGGGCGGTGCTGGTGCAGCTCAAG
CAGAGGGACAGCGACGAGGCCCAGCAGGCGTCGCTCAAGCAGGCGCTGAA
GGAAGTGCCGAAGTCGGGGGAGGTGTGGTGCGAGGGGGCGAGGATACACC
TCAACCCGCTGTCGAAAGCTTTCGACCTCGAGACGGCTGGGAAGTACCTT
GGCTTCGCGGTGCAGTTCACCCCGCAGTACGGCGACTCTTTCATGGAGTG
CCTCAGGCGCTGAAGGAAGTGCCGAAGTCGGGGGAGGTGTGGTGCGAGGG
GGCGAGGATACACCTCAACCCGCTGTCGAAAGCTTTCGACCTCGAGACGG
CTGGGAAGTACCTTGGCTTCGCGGTGCAGTTCACCCCGCAGTACGGCGAC
TCTTTCATGGAGTGCCTCAGGCTGGGTCTCCTGAAGGACCTCTTCTTGCC
GAGGGCGCAAGCGATCGCCGACGCGAGGGAGAGCCGATCCGCCCCTCCAG
CCGCCCCCACCGCAGCCGCCACGACGTTAGAGTTGCCTGGATCGACGGTA
GCACCAACGGTAACACCAACGGTAATATCGACGGTAACCCCAACGGTGCC
ATCAACGGTAACACCAATGATAACGTCAACGGTAACATCATCAACCGCGA
TGGCGGCGGCAGCGGTAGCACCCACGTCGTCGGTGGAGTCTCCTCCCCCT
CGATGCGAGCGGACAACGGCCCGCCCCGGTGAAAGCAGAAAGGGGAAGGG
GATGGGCAATCAGGATGCGCTTCTTGGGAGTAGCACGGTGGCCGGCTCTG
GAGCGGAAGAGGCTGGTGGTGGTGTTCGTGGTGGCAATACTGGTGGCAGT
GCTGCACGTGCTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAG
GGAGGATCCCGAGGCTGGGTCTCCTGAAGGACCTCTTCTTGCCGAGGGCG
CAAGCGATCGCCGACGCGAGGGAGAGCCGATCCGCCCCTCCAGCCGCCCC
CACCGCAGCCGCCACGACGTTAGAGTTGCCTGGATCGACGGTAGCACCAA
CGGTAACACCAACGGTAATATCGACGGTAACCCCAACGGTGCCATCAACG
GTAACACCAATGATAACGTCAACGGTAACATCATCAACCGCGATGGCGGC
GGCAGCGGTAGCACCCACGTCGTCGGTGGAGTCTCCTCCCCCTCGATGCG
AGCGGACAACGGCCCGCCCCGGTGAAAGCAGAAAGGGGAAGGGGATGGGC
AATCAGGATGCGCTTCTTGGGAGTAGCACGGTGGCCGGCTCTGGAGCGGA
AGAGGCTGGTGGTGGTGTTCGTGGTGGCAATACTGGTGGCAGTGCTGCAC
GTGCTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAGGGAGGAT
CCCGAGGTAGCCCGCCCATCCACGGCACTCTCAGCCCACGGGGACGTCGA
CAGAAGGCATGCCCCCTCGTCCGAGGCGTCATCGTGTCCCCTGCTAACTT
TCGAGGCCTGGGCGGCGATCGACGCGGGAAAGCCCGCGGGTAGCCCGCCC
ATCCACGGCACTCTCAGCCCACGGGGACGTCGACAGAAGGCATGCCCCCT
CGTCCGAGGCGTCATCGTGTCCCCTGCTAACTTTCGAGGCCTGGGCGGCG
ATCGACGCGGGAAAGCCCGCGGCAGACAGCGGCGGTGGCGGCGGTGGCGG
CGGAGGTGGCTTCGGCGGGGGTGATAAGGGTGGAGGACATTTAGTGACGG
TCGAGGCTTGCGCTGAGGGCAGTGGAGCGCTAGGAGGAGGAGGAGGAGGA
GGAGGGAGTGATGACGCGCGTAAGGGCGGCTCCGGCGGGCGCGGCGACGG
TAGTCGTACAGACGGAGGCGCGGTGGAAGGAGGGGATGGCGGGGAAGTGT
CCCCTCCCCCTTGTCGCTTCGAGCTGAGCGAGAAGGAAATGGAGGCGGCC
GGGCGATTGAGCGAGGTAGACTTTTTGAGGGCGGAGGTGGAGGGGCTGGT
GCTGAGATGCGTCAACGCGGACCCGAATTACGGCTCCATGTGGTTCCACT
GCCGGCATCGACCTTCGGACACGGCCAACAGACAGCGGCGGTGGCGGCGG
TGGCGGCGGAGGTGGCTTCGGCGGGGGTGATAAGGGTGGAGGACATTTAG
TGACGGTCGAGGCTTGCGCTGAGGGCAGTGGAGCGCTAGGAGGAGGAGGA
GGAGGAGGAGGGAGTGATGACGCGCGTAAGGGCGGCTCCGGCGGGCGCGG
CGACGGTAGTCGTACAGACGGAGGCGCGGTGGAAGGAGGGGATGGCGGGG
AAGTGTCCCCTCCCCCTTGTCGCTTCGAGCTGAGCGAGAAGGAAATGGAG
GCGGCCGGGCGATTGAGCGAGGTAGACTTTTTGAGGGCGGAGGTGGAGGG
GCTGGTGCTGAGATGCGTCAACGCGGACCCGAATTACGGCTCCATGTGGT
TCCACTGCCGGCATCGACCTTCGGACACGGCCAAGTCCATCCTGACCATG
GCGAAAGTGATGATGGCTGACGAGCTCACCACGCTGCAGGACATCTACCT
CAACGCTGTCACGCGCCACGTCCTACTCCAGAGAGAAGCGGACGCCTACA
TCGCTGCAACCACTGCTGCCGCGGCGGAGGGCGGCAACGCCTCCCAAGGT
GGTGAGGGGAGGGAGGGGAGGGACACACCTCGACGGCGAACAGGAGGAGG
AGGGTCGAGGGCTACCAGGAAGCGGGAGGGGAAGGAGGAAAGGCGAGACC
GCTTGTTGGCGGTAGCGGCTAGGATAGCTCCTGGGGTGGCGTTCGCTCGT
CCGGAAGGAAGCCTCAAGGGCATCAGGTCCATCCTGACCATGGCGAAAGT
GATGATGGCTGACGAGCTCACCACGCTGCAGGACATCTACCTCAACGCTG
TCACGCGCCACGTCCTACTCCAGAGAGAAGCGGACGCCTACATCGCTGCA
ACCACTGCTGCCGCGGCGGAGGGCGGCAACGCCTCCCAAGGTGGTGAGGG
GAGGGAGGGGAGGGACACACCTCGACGGCGAACAGGAGGAGGAGGGTCGA
GGGCTACCAGGAAGCGGGAGGGGAAGGAGGAAAGGCGAGACCGCTTGTTG
GCGGTAGCGGCTAGGATAGCTCCTGGGGTGGCGTTCGCTCGTCCGGAAGG
AAGCCTCAAGGGCATCAGGGCGGAGGATTTCGTGACGGGTTTGGCGAGCC
TCAACCGAATCACGGCACAGATGGGCCGTCTTCGCAGCGAGGACCGCCGC
AAGATTCTGTTCGGATCCGACCAAATCGTGCCTTAAGGCGGAGGATTTCG
TGACGGGTTTGGCGAGCCTCAACCGAATCACGGCACAGATGGGCCGTCTT
CGCAGCGAGGACCGCCGCAAGATTCTGTTCGGATCCGACCAAATCGTGCC
TTAA
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