mRNA_M-pyrifera_M_contig73271.17380.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig73271.17380.1
Unique NamemRNA_M-pyrifera_M_contig73271.17380.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig73271.17380.1 vs. uniprot
Match: A0A7Y4WHW5_9BACT (Sulfatase (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4WHW5_9BACT)

HSP 1 Score: 171 bits (434), Expect = 2.010e-45
Identity = 134/318 (42.14%), Postives = 159/318 (50.00%), Query Frame = 1
Query:    1 FDPHYPYAPPGPLAPGH--DAYQGEVSYADAQLGRLFGALEDAGRMDATAIVVTADHGESLGDHGELSHGHLLYDATQRVPLLMAGPGVVPGRVVERTVDLVDVAPTVCDWLGVD-APELRAQGGRSLHGLLTGA----PEETLAAQPQYLETILPRLHSGWSELYGVAEDGATFVEAPGA----GRAELRVV------GQAGDQLLAEPARSAELAMTLEALRAELPP-AEPFAAHAAGDADEELLAGLAALGYLGIDHMA-----TASDAPGRDPRLVIEARSAAERVRTHLDAGALPAAEAELARIAAVDPDGLI 885
            FDPH P+A P   A     D YQ E+++ D  LG L G LE   R   T +VVTADHGESLG+HGE +HG  LYDAT RVPLL AGPGVV  R +   V LVD+A T+ +   +D   E     GRSL  LL G     PE +      YLET  PRLH GWSEL G+      +VEAPGA    GR    +       G+  D    EP    ELA  L A R  L   A P+  H   +  EE    LAALGY G D  A     +A   P  DPR VI      E V     +GA   A   L R+ A+ P  ++
Sbjct:  176 FDPHEPHAAPPEFARRFPDDPYQAEIAFVDHALGALLGELERLARTADTLVVVTADHGESLGEHGETTHGLQLYDATMRVPLLFAGPGVV-ARALSAPVSLVDLAATLVELAEIDDGGEFSRHSGRSLAALLRGEAGLEPERSA-----YLETYYPRLHYGWSELVGITRGDWKYVEAPGALGPDGRVSSELYRPLPDPGELLDLAQHEPEHLLELARELGAQRRSLEANAVPWQPH---EPSEEEAQALAALGYSGADVTAELPGASALSPPAPDPRRVIGCVPLFEAVHMQSASGAFEDAARSLQRLEALAPGAVL 484          
BLAST of mRNA_M-pyrifera_M_contig73271.17380.1 vs. uniprot
Match: A0A2V7U2W8_9BACT (Sulfatase domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7U2W8_9BACT)

HSP 1 Score: 169 bits (429), Expect = 2.060e-43
Identity = 121/305 (39.67%), Postives = 165/305 (54.10%), Query Frame = 1
Query:    1 FDPHYPYAPPGPLAPGHDA--YQGEVSYADAQLGRLFGALEDAGRMDATAIVVTADHGESLGDHGELSHGHLLYDATQRVPLLMAGPGVVPGRVVERTVDLVDVAPTVCDWLGV-DAPELRAQGGRSLHGLLTGAPEETLAAQPQYLETILPRLHSGWSELYGVAEDGATFVEAPGAGRAELRVV----GQAGDQLLAEPARSAELAMTLEA-LRAELPPAEPFAAHAAGDADEELLAGLAALGYLGIDHMATASDAPGRDPRLVIEARSAAERVRTHLDAGAL--PAAEAELARIAAVDPDGLI 885
            +DPH PY PPGPL     +  Y GE+++ D+QL RL GAL D  ++  T ++VTADHGESLG+HGE +HG  +YDAT RVP +MAGPG+ PGRV       +DV PT+ D+ G+  AP +    GRSL     G     ++  P Y E++      GW+ L+         ++AP   R EL  +    G+  +++   P R+AEL   L+A L A  PPA      AA   D E  A LAALGY+G  H   A+ AP RDP+  +       R+   + A  +  P A  EL+ + A DP  LI
Sbjct:  193 YDPHAPYEPPGPLGERFRSSPYDGEIAFVDSQLARLLGALNDKRQLARTLVLVTADHGESLGEHGEGTHGLFVYDATLRVPWIMAGPGLDPGRVASTVARSIDVLPTLLDYAGLAPAPGIE---GRSLRPAAEG---REMSDAPAYAESLYAEREFGWAPLHAWRTARFKLIDAP---RPELYDLDADAGERTNRVAELPDRAAELRRPLQAALSASAPPA------AAASVDPETAARLAALGYVGGGHAPLAAGAPRRDPKDGVRLMP---RINRGMSAARIDPPLAIRELSAVLAEDPGLLI 479          
BLAST of mRNA_M-pyrifera_M_contig73271.17380.1 vs. uniprot
Match: A0A2V9JTM2_9BACT (Sulfatase domain-containing protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9JTM2_9BACT)

HSP 1 Score: 161 bits (408), Expect = 4.580e-41
Identity = 105/269 (39.03%), Postives = 142/269 (52.79%), Query Frame = 1
Query:    1 FDPHYPYAPPGPLAPGH--DAYQGEVSYADAQLGRLFGALEDAGRMDATAIVVTADHGESLGDHGELSHGHLLYDATQRVPLLMAGPGVVPGRVVERTVDLVDVAPTVCDWLGVDAPELRAQGGRSLHGLLTGAPEETLAAQPQYLETILPRLHSGWSELYGVAEDGATFVEAPGAGRAELRVVGQAGDQLLAE-PARSAELAMTLEALRAELPPAEPFAAHAAGDADEELLAGLAALGYLGIDHMATASDAPGRDPRLVIEARSAAER 798
            +DPH+PY PP P    +  D Y GEV+Y D+ +GRL  AL + G  D T +V+ ADHGESLG+HGE +HG  LYD+T RVPL++AGPG+  GRVV   V  +D+ PT+CD LG+ AP  +AQG   +  L+ G     + +   YLET+ PR H GWSEL G+  D    V  P      +       + +LA  PA++ EL   +        P +          D+E    L ALGY+         D  G DP+  +    A ER
Sbjct:  157 YDPHFPYDPPEPYRSRYPKDRYGGEVAYTDSSVGRLLDALRERGLADDTLVVLVADHGESLGEHGEYTHGVFLYDSTVRVPLIVAGPGIPSGRVVAPQVRSIDILPTICDLLGL-APGEQAQGVSLVPALVEG---HAVGSNYCYLETLYPRSHLGWSELRGMRTDDWKLVVGPKPELYRMTKDRAETENVLAHYPAQAEELQRRVWEAAG---PRQTLGELRPRPVDDERRRELQALGYVNAGVRPIRIDMSGPDPKERVAVLEALER 418          
BLAST of mRNA_M-pyrifera_M_contig73271.17380.1 vs. uniprot
Match: A0A3M2C4U1_9BACT (Sulfatase domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M2C4U1_9BACT)

HSP 1 Score: 162 bits (411), Expect = 5.000e-41
Identity = 138/369 (37.40%), Postives = 184/369 (49.86%), Query Frame = 1
Query:    1 FDPHYPYAPPGPLAPGHDA--YQGEVSYADAQLGRLFGALEDAGRMDATAIVVTADHGESLGDHGELSHGHLLYDATQRVPLLMAGPGVVPGRVVERTVDLVDVAPTVCDWLGVDAPELRAQGGRSLHGLLTGAPEETLAAQPQYLETILPRLHSGWSELYGVAEDGA-TFVEAPGAGRAELRVVGQAGDQLLAEPARSAE-LAMTLEALRAELPPAEPFAAHAAGDADEELLAGLAALGYLGIDHMATASDAPGRDPRLVI-EARSAAERVRTHLDAGALPAAEAELARIAAVDPDGLIHAE---FSGLVAMAQTPPDLAAAAEAYDRATTLAPGRRNLWVQLAGVQRELGDPAAALLSVQRAKALAP 1083
            +DPH PY PP P A  +    Y GEV+++DA +G L  AL   G    T +VVT+DHGE LG+HGE  HG  +Y++T RVPL+  GPGV PG  ++  V LVD+ PT+ + LGV  P      GRSL     G  E     +P Y E+++PRLH GWSEL  VA DG   +VEAP     +L         L+A+  R A  L   + A RA        AA    D D + L  L ALGY+G    A+  D PG DP+  I E R A E +R  L+        A +AR  ++   G+  AE   + G   + Q     A AA  +  A    P     W+ LA    + GD  AAL +++  +   P
Sbjct:  191 YDPHDPYEPPEPYAARYAERPYAGEVAFSDALIGELDAALSRLGLAAGTLLVVTSDHGEGLGEHGERLHGFFVYESTLRVPLIARGPGVTPGTELDGPVGLVDLYPTLLERLGVAPPAGVELAGRSLASAWAGRGEPP--PRPLYAESLVPRLHFGWSELR-VARDGWWKYVEAPRPELYDLEHDPHEERNLVAQERRRARALRDAVAAFRAR-----EQAAETTQDVDPQWLEQLHALGYVGGSSPASTRD-PGADPKDKIDEFRLANEAMREGLERLHQRDFAASVARFESLLERGIESAELHLYLGRALLGQR--RFADAAGHFQEAAARTPTYVGAWLGLAEAYAQQGDADAALAALRGGRQAMP 548          
BLAST of mRNA_M-pyrifera_M_contig73271.17380.1 vs. uniprot
Match: A0A523PBE7_9BACT (Sulfatase domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PBE7_9BACT)

HSP 1 Score: 162 bits (410), Expect = 7.920e-41
Identity = 116/296 (39.19%), Postives = 159/296 (53.72%), Query Frame = 1
Query:    1 FDPHYPYAPPGPLAPGHDA--YQGEVSYADAQLGRLFGALEDAGRMDATAIVVTADHGESLGDHGELSHGHLLYDATQRVPLLMAGPGVVPGRVVERTVDLVDVAPTVCDWLGVDAPELRAQGGRSLHGLLTGAPEETLAAQPQYLETILPRLHSGWSELYGVAEDGATFVEAPGAGRAELRVVGQAGDQLLAEPARSAELAMTLEALRAELPPAEPFAAHAA--GDADEELLAGLAALGY-LGIDHMATASDAPGRDPRLVIEARSAAERVRTHLDAGALPAAEAELARIAAVDP 873
            FDPH  Y  P P A       Y GE++YADAQLG L G L D G +  T IV+TADHGE+LG+HGE +HG  +YDAT RVPL+++ P +  G  V   V L+DV PTV + LGV  P +    GRSL  +  GA E  LA  P Y ET  P  + GW++L  + ++   ++ AP   R EL ++G+   +   + ARS  +A   E+L   L P       A+   + D ++ A LAALGY    D  A  ++ P  DP+  I A  A +    +L AG    +EA    + A +P
Sbjct:  207 FDPHADYRAPEPFAAQFPEAPYDGEIAYADAQLGALLGRLHDRGELGETLIVITADHGEALGEHGETTHGVFVYDATTRVPLILSHPSLEAGLRVPAVVSLIDVLPTVLELLGV--PPIGDCDGRSLASVALGA-ETDLAPVPAYSETQFPYYNYGWADLRSLRDEEHRYIRAP---RPELYLLGEDPGETRNQAARSPAIAARYESLLDALLPETERDTRASEPDELDPDVRAALAALGYSFSNDPGAERAERP--DPKDRIRALLAQQTAEGYLLAGRRAESEAAYRAVLATNP 494          
BLAST of mRNA_M-pyrifera_M_contig73271.17380.1 vs. uniprot
Match: A0A523D2K8_9BACT (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A523D2K8_9BACT)

HSP 1 Score: 158 bits (400), Expect = 9.560e-40
Identity = 106/264 (40.15%), Postives = 145/264 (54.92%), Query Frame = 1
Query:    1 FDPHYPYAPPGPLAPGHDA--YQGEVSYADAQLGRLFGALEDAGRMDATAIVVTADHGESLGDHGELSHGHLLYDATQRVPLLMAGPGVV-PGRVVERTVDLVDVAPTVCDWLGVDAPELRAQGGRSLHGLLTGAPEETLAAQPQYLETILPRLHSGWSELYGVAEDGATFVEAPGAGRAELRVVG-QAGDQLLAEPARSAELAMTLEALRAELPPAEPFAAHAAGDADEELLAGLAALGYLGIDHMATASDAPGRDPRLVIEA 780
            FDPH+ Y  P P    + A  Y GE++YADAQLGR+   L   G +D T +V+T+DHGESL +HGE +HG  +YDAT R+PLLM  PG +  GR V+    LVDVAPT+ + LG+    L A  GRSL   L G  +E  A    +LE+  PRL  GWSEL  + +    ++ AP     +L+    +  D   AEP R+ E A  LEAL + +    P A       D ++   L +LGYL    + + S A  +D  + +EA
Sbjct:  194 FDPHWEYRAPEPYLSDYSATPYHGEIAYADAQLGRVLDQLAQRGWLDDTLVVLTSDHGESLDEHGESTHGLFVYDATLRIPLLMRHPGRLGEGRTVDSLASLVDVAPTILEVLGLPGSALPA-AGRSLLPALQGEEDEPPAV---FLESWAPRLDYGWSELTAIRDARWKYIRAPRPELYDLQADPLELTDLAAAEPERAREYAGKLEALESSISSGHPTAERQ--QLDPQVRKALESLGYLSTGRVGSGSGADPKDKVMEMEA 451          
BLAST of mRNA_M-pyrifera_M_contig73271.17380.1 vs. uniprot
Match: A0A2V7XSF7_9BACT (Sulfatase domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7XSF7_9BACT)

HSP 1 Score: 159 bits (402), Expect = 1.130e-39
Identity = 107/263 (40.68%), Postives = 139/263 (52.85%), Query Frame = 1
Query:    1 FDPHYPYAPPGPLAPGHDA--YQGEVSYADAQLGRLFGALEDAGRMDATAIVVTADHGESLGDHGELSHGHLLYDATQRVPLLMAGPGVVPGRVVERTVDLVDVAPTVCDWLGVDAPELRAQGGRSLHGLLTGAPEETLAAQPQYLETILPRLHSGWSELYGVAEDGATFVEAPGAGRAELRVVGQAGDQLLAEPA----RSAELAMTLEALRAELPPA--EPFAAHAAGDADEELLAGLAALGYLGIDHMATASDAPGRDPR 765
            +DPH PY PPG LA    A  Y GE+++ DAQL RL  AL+  G +  T ++VTADHGESLG+HGE +HG  +YDAT RVP +MAGPG+  GRV       +DV PT+ D+ G+  P  RA  GRSL     G     ++  P Y ET+ P    GW+ L+         ++AP   R EL         L+A+P     RS E   + + LR +L  A   P  + AA   D +    L ALGYLG      AS    RDP+
Sbjct:  203 YDPHAPYEPPGELAQRFRAAPYDGEIAFVDAQLARLLRALDQRGTLGRTVVLVTADHGESLGEHGEGTHGLFVYDATLRVPWIMAGPGLGAGRVPATVARGIDVLPTLLDYAGLAIP--RALDGRSLRAAAEG---REMSDAPAYAETLYPEREFGWAGLHAWRTSRFKLIDAP---RPELY-------DLIADPKETMDRSREQGASADELRRKLQAALSRPAPSAAAAAVDTDTAERLGALGYLGGGRAQPASGGARRDPK 450          
BLAST of mRNA_M-pyrifera_M_contig73271.17380.1 vs. uniprot
Match: A0A2V7UHQ3_9BACT (Sulfatase domain-containing protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7UHQ3_9BACT)

HSP 1 Score: 155 bits (393), Expect = 1.470e-39
Identity = 101/258 (39.15%), Postives = 137/258 (53.10%), Query Frame = 1
Query:    1 FDPHYPYAPPGPLAPGHDA--YQGEVSYADAQLGRLFGALEDAGRMDATAIVVTADHGESLGDHGELSHGHLLYDATQRVPLLMAGPGVVPGRVVERTVDLVDVAPTVCDWLGVDAPELRAQGGRSLHGLLTGAPEETLAAQPQYLETILPRLHSGWSELYGVAEDGATFVEAPGAGRAELRV-VGQAGDQLLAEPARSAELAMTLEALRAELPPAEPFAAHAAGDADEELLAGLAALGYLGIDHMATASDAPGRDPR 765
            +DPH PY PP  LA    A  Y GE+++ DAQL RL   LE+ G +  T ++VTADHGE+LG+HGE +HG  +YDAT +VP +MAGPG+  GRV       +DV PT+ D+ G+ AP    +G RSL     G     +A  P Y E++ P    GW+ L+         +EAP     +L     +  ++  A+PAR  EL   L+A+ +   PA      AA   D E  A L ALGY+G       S    RDP+
Sbjct:  196 YDPHAPYEPPAALADRFRAAPYDGEIAFVDAQLARLLRGLEEKGFLAHTVVLVTADHGEALGEHGEDTHGLFVYDATLKVPWIMAGPGLAAGRVATLVARGIDVLPTLLDYAGL-APAAGVEG-RSLRPAAEG---HEMADAPAYAESLYPEREFGWAPLHAWRTSKFKLIEAPRPELYDLEADAAETANRAAAQPARVEELRQKLQAVLSHPAPA------AAASVDPETAAKLGALGYVGGGRAQPVSGGARRDPK 442          
BLAST of mRNA_M-pyrifera_M_contig73271.17380.1 vs. uniprot
Match: A0A7X7VD04_9BACT (Sulfatase-like hydrolase/transferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7X7VD04_9BACT)

HSP 1 Score: 158 bits (400), Expect = 1.810e-39
Identity = 84/174 (48.28%), Postives = 110/174 (63.22%), Query Frame = 1
Query:    1 FDPHYPYAPPGPLAPGH--DAYQGEVSYADAQLGRLFGALEDAGRMDATAIVVTADHGESLGDHGELSHGHLLYDATQRVPLLMAGPGVVPGRVVERTVDLVDVAPTVCDWLGVDAPELRAQGGRSLHGLLTGAPEETLAAQPQYLETILPRLHSGWSELYGVAEDGATFVEAP 516
            FDPH PYAPP P A  +  D Y GEV+YADA+L +LF A+E  G    T +V+TADHGESLG+HGE++HG+  Y+AT RVPL++AGP + P RV +     VD+ PT CD LG+ APE     GRSL  LL G     L  +P Y E +   LH G + L G+ + G  + ++P
Sbjct:  200 FDPHAPYAPPEPFASRYAADPYSGEVAYADAELAKLFAAVEARGETGRTVVVLTADHGESLGEHGEMTHGYFAYNATLRVPLIVAGPSIAPARVRDFAAH-VDLFPTACDLLGLTAPE--GLSGRSLRPLLEG---RRLGPRPIYFEALEASLHRGAAPLRGLIDGGRKYFDSP 367          
BLAST of mRNA_M-pyrifera_M_contig73271.17380.1 vs. uniprot
Match: A0A2V8B6N4_9BACT (Sulfatase domain-containing protein n=4 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A2V8B6N4_9BACT)

HSP 1 Score: 156 bits (394), Expect = 9.150e-39
Identity = 106/247 (42.91%), Postives = 136/247 (55.06%), Query Frame = 1
Query:    1 FDPHYPYAPPGPLAPGHDA--YQGEVSYADAQLGRLFGALEDAGRMDATAIVVTADHGESLGDHGELSHGHLLYDATQRVPLLMAGPGVVPGRVVERTVDLVDVAPTVCDWLGVDAPELRAQG---GRSLHGLLTGAPEETLAAQPQYLETILPRLHSGWSELYGVAEDGATFVEAPGAGRAELRVVGQAGDQLL----AEPARSAELAMTLEALRAELPPAEPFAAHAAGDADEELLAGLAALGYL 714
            +DPH PY PP P A  +    Y GEV++ D  +GRL   L   G  D T +V+T+DHGE+LG+HGEL HG  LY AT RVPLLM GPG+VPG  +   V  VD+ PT+ D  GV  P  R+ G   GRSL  LL G P       P + E++ PR+H GWS+L  V E    F+ AP   R+EL  + +   +L     AEPAR+      ++   A    A    A A GD   EL+  L ALGY+
Sbjct:  196 YDPHAPYEPPEPYASRYAERPYDGEVAWTDELIGRLDRTLARLGIRDDTLLVLTSDHGEALGEHGELVHGFFLYQATLRVPLLMRGPGIVPGTRLPLVVQSVDLFPTILDLAGVAPP--RSTGSLPGRSLASLLRGEPAPRDEV-PAFAESLTPRIHYGWSDLRSVREGRWKFILAP---RSELYDLARDPSELKNVIDAEPARARAFRAAIDRRLASEAAATRGQAQA-GDVPIELIEKLGALGYV 435          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig73271.17380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y4WHW5_9BACT2.010e-4542.14Sulfatase (Fragment) n=1 Tax=Planctomycetes bacter... [more]
A0A2V7U2W8_9BACT2.060e-4339.67Sulfatase domain-containing protein n=1 Tax=Acidob... [more]
A0A2V9JTM2_9BACT4.580e-4139.03Sulfatase domain-containing protein (Fragment) n=1... [more]
A0A3M2C4U1_9BACT5.000e-4137.40Sulfatase domain-containing protein n=1 Tax=Acidob... [more]
A0A523PBE7_9BACT7.920e-4139.19Sulfatase domain-containing protein n=1 Tax=Planct... [more]
A0A523D2K8_9BACT9.560e-4040.15Tetratricopeptide repeat protein (Fragment) n=1 Ta... [more]
A0A2V7XSF7_9BACT1.130e-3940.68Sulfatase domain-containing protein n=1 Tax=Acidob... [more]
A0A2V7UHQ3_9BACT1.470e-3939.15Sulfatase domain-containing protein (Fragment) n=1... [more]
A0A7X7VD04_9BACT1.810e-3948.28Sulfatase-like hydrolase/transferase n=1 Tax=Acido... [more]
A0A2V8B6N4_9BACT9.150e-3942.91Sulfatase domain-containing protein n=4 Tax=unclas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig73271contigM-pyrifera_M_contig73271:2..1084 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score132.5
Seed ortholog evalue4e-28
Seed eggNOG ortholog1047013.AQSP01000123_gene1525
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Tetratricopeptide repeat
EggNOG OGs2NPK1@2323,COG0457@1,COG0457@2,COG3119@1,COG3119@2
COG Functional cat.T
Best tax levelunclassified Bacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size1083
Cds size1083
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816629.7640297-CDS-M-pyrifera_M_contig73271:1..10841622816629.7640297-CDS-M-pyrifera_M_contig73271:1..1084Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73271 2..1084 +
1692278087.032181-CDS-M-pyrifera_M_contig73271:1..10841692278087.032181-CDS-M-pyrifera_M_contig73271:1..1084Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig73271 2..1084 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig73271.17380.1prot_M-pyrifera_M_contig73271.17380.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig73271 2..1084 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig73271.17380.1

>prot_M-pyrifera_M_contig73271.17380.1 ID=prot_M-pyrifera_M_contig73271.17380.1|Name=mRNA_M-pyrifera_M_contig73271.17380.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=361bp
FDPHYPYAPPGPLAPGHDAYQGEVSYADAQLGRLFGALEDAGRMDATAIV
VTADHGESLGDHGELSHGHLLYDATQRVPLLMAGPGVVPGRVVERTVDLV
DVAPTVCDWLGVDAPELRAQGGRSLHGLLTGAPEETLAAQPQYLETILPR
LHSGWSELYGVAEDGATFVEAPGAGRAELRVVGQAGDQLLAEPARSAELA
MTLEALRAELPPAEPFAAHAAGDADEELLAGLAALGYLGIDHMATASDAP
GRDPRLVIEARSAAERVRTHLDAGALPAAEAELARIAAVDPDGLIHAEFS
GLVAMAQTPPDLAAAAEAYDRATTLAPGRRNLWVQLAGVQRELGDPAAAL
LSVQRAKALAP
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mRNA from alignment at M-pyrifera_M_contig73271:2..1084+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig73271.17380.1 ID=mRNA_M-pyrifera_M_contig73271.17380.1|Name=mRNA_M-pyrifera_M_contig73271.17380.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1083bp|location=Sequence derived from alignment at M-pyrifera_M_contig73271:2..1084+ (Macrocystis pyrifera P11B4 male)
TTCGATCCGCACTACCCGTATGCGCCGCCCGGGCCGCTCGCGCCGGGGCA CGATGCGTACCAGGGCGAGGTGAGCTACGCGGACGCGCAGCTCGGCCGGC TCTTTGGCGCGCTCGAGGACGCGGGGCGCATGGACGCGACCGCGATCGTC GTGACCGCCGACCACGGCGAGTCCCTGGGCGACCACGGCGAGCTGAGCCA CGGCCACCTCTTGTACGACGCGACCCAGCGCGTGCCCTTGTTGATGGCCG GGCCGGGCGTGGTGCCCGGGCGGGTCGTCGAGCGCACGGTCGATCTGGTC GACGTCGCGCCGACGGTGTGCGACTGGCTGGGCGTCGACGCGCCGGAGCT GCGCGCGCAGGGCGGGCGCAGCTTGCACGGGCTGCTGACCGGCGCCCCCG AGGAGACGCTCGCCGCGCAGCCCCAGTACCTCGAGACGATCCTGCCGCGG CTGCACTCCGGTTGGAGCGAGCTGTACGGCGTCGCAGAGGACGGCGCGAC CTTTGTCGAGGCGCCAGGCGCCGGGCGCGCCGAGCTGCGCGTCGTGGGCC AGGCCGGCGACCAGCTGCTGGCCGAACCCGCGCGCTCCGCAGAGCTGGCG ATGACGCTCGAGGCCTTGCGCGCCGAGCTGCCACCGGCCGAGCCCTTCGC GGCGCACGCCGCGGGCGACGCCGACGAAGAGCTGCTGGCGGGCCTCGCCG CCCTCGGCTACCTGGGCATCGACCACATGGCGACCGCCAGCGACGCGCCG GGCCGCGACCCGCGCCTGGTGATCGAGGCGCGCTCCGCCGCCGAGCGCGT GCGCACCCACCTCGACGCCGGCGCGCTCCCCGCCGCAGAAGCCGAGCTCG CGCGCATCGCCGCCGTCGATCCGGACGGCCTGATCCACGCCGAGTTCAGC GGCCTGGTCGCCATGGCCCAGACGCCACCCGACCTCGCCGCCGCCGCCGA AGCCTACGACCGCGCCACCACCCTCGCGCCCGGCCGCCGCAACCTCTGGG TCCAGCTCGCCGGCGTCCAGCGCGAGCTCGGCGACCCCGCAGCCGCGCTG CTCAGCGTCCAGCGCGCCAAGGCCCTCGCGCCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig73271:2..1084+

>mRNA_M-pyrifera_M_contig73271.17380.1 ID=mRNA_M-pyrifera_M_contig73271.17380.1|Name=mRNA_M-pyrifera_M_contig73271.17380.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2166bp|location=Sequence derived from alignment at M-pyrifera_M_contig73271:2..1084+ (Macrocystis pyrifera P11B4 male)
TTCGATCCGCACTACCCGTATGCGCCGCCCGGGCCGCTCGCGCCGGGGCA
CGATGCGTACCAGGGCGAGGTGAGCTACGCGGACGCGCAGCTCGGCCGGC
TCTTTGGCGCGCTCGAGGACGCGGGGCGCATGGACGCGACCGCGATCGTC
GTGACCGCCGACCACGGCGAGTCCCTGGGCGACCACGGCGAGCTGAGCCA
CGGCCACCTCTTGTACGACGCGACCCAGCGCGTGCCCTTGTTGATGGCCG
GGCCGGGCGTGGTGCCCGGGCGGGTCGTCGAGCGCACGGTCGATCTGGTC
GACGTCGCGCCGACGGTGTGCGACTGGCTGGGCGTCGACGCGCCGGAGCT
GCGCGCGCAGGGCGGGCGCAGCTTGCACGGGCTGCTGACCGGCGCCCCCG
AGGAGACGCTCGCCGCGCAGCCCCAGTACCTCGAGACGATCCTGCCGCGG
CTGCACTCCGGTTGGAGCGAGCTGTACGGCGTCGCAGAGGACGGCGCGAC
CTTTGTCGAGGCGCCAGGCGCCGGGCGCGCCGAGCTGCGCGTCGTGGGCC
AGGCCGGCGACCAGCTGCTGGCCGAACCCGCGCGCTCCGCAGAGCTGGCG
ATGACGCTCGAGGCCTTGCGCGCCGAGCTGCCACCGGCCGAGCCCTTCGC
GGCGCACGCCGCGGGCGACGCCGACGAAGAGCTGCTGGCGGGCCTCGCCG
CCCTCGGCTACCTGGGCATCGACCACATGGCGACCGCCAGCGACGCGCCG
GGCCGCGACCCGCGCCTGGTGATCGAGGCGCGCTCCGCCGCCGAGCGCGT
GCGCACCCACCTCGACGCCGGCGCGCTCCCCGCCGCAGAAGCCGAGCTCG
CGCGCATCGCCGCCGTCGATCCGGACGGCCTGATCCACGCCGAGTTCAGC
GGCCTGGTCGCCATGGCCCAGACGCCACCCGACCTCGCCGCCGCCGCCGA
AGCCTACGACCGCGCCACCACCCTCGCGCCCGGCCGCCGCAACCTCTGGG
TCCAGCTCGCCGGCGTCCAGCGCGAGCTCGGCGACCCCGCAGCCGCGCTG
CTCAGCGTCCAGCGCGCCAAGGCCCTCGCGCCGTTCGATCCGCACTACCC
GTATGCGCCGCCCGGGCCGCTCGCGCCGGGGCACGATGCGTACCAGGGCG
AGGTGAGCTACGCGGACGCGCAGCTCGGCCGGCTCTTTGGCGCGCTCGAG
GACGCGGGGCGCATGGACGCGACCGCGATCGTCGTGACCGCCGACCACGG
CGAGTCCCTGGGCGACCACGGCGAGCTGAGCCACGGCCACCTCTTGTACG
ACGCGACCCAGCGCGTGCCCTTGTTGATGGCCGGGCCGGGCGTGGTGCCC
GGGCGGGTCGTCGAGCGCACGGTCGATCTGGTCGACGTCGCGCCGACGGT
GTGCGACTGGCTGGGCGTCGACGCGCCGGAGCTGCGCGCGCAGGGCGGGC
GCAGCTTGCACGGGCTGCTGACCGGCGCCCCCGAGGAGACGCTCGCCGCG
CAGCCCCAGTACCTCGAGACGATCCTGCCGCGGCTGCACTCCGGTTGGAG
CGAGCTGTACGGCGTCGCAGAGGACGGCGCGACCTTTGTCGAGGCGCCAG
GCGCCGGGCGCGCCGAGCTGCGCGTCGTGGGCCAGGCCGGCGACCAGCTG
CTGGCCGAACCCGCGCGCTCCGCAGAGCTGGCGATGACGCTCGAGGCCTT
GCGCGCCGAGCTGCCACCGGCCGAGCCCTTCGCGGCGCACGCCGCGGGCG
ACGCCGACGAAGAGCTGCTGGCGGGCCTCGCCGCCCTCGGCTACCTGGGC
ATCGACCACATGGCGACCGCCAGCGACGCGCCGGGCCGCGACCCGCGCCT
GGTGATCGAGGCGCGCTCCGCCGCCGAGCGCGTGCGCACCCACCTCGACG
CCGGCGCGCTCCCCGCCGCAGAAGCCGAGCTCGCGCGCATCGCCGCCGTC
GATCCGGACGGCCTGATCCACGCCGAGTTCAGCGGCCTGGTCGCCATGGC
CCAGACGCCACCCGACCTCGCCGCCGCCGCCGAAGCCTACGACCGCGCCA
CCACCCTCGCGCCCGGCCGCCGCAACCTCTGGGTCCAGCTCGCCGGCGTC
CAGCGCGAGCTCGGCGACCCCGCAGCCGCGCTGCTCAGCGTCCAGCGCGC
CAAGGCCCTCGCGCCG
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