mRNA_M-pyrifera_M_contig72839.17300.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig72839.17300.1
Unique NamemRNA_M-pyrifera_M_contig72839.17300.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig72839.17300.1 vs. uniprot
Match: A0A6S7KGB0_PARCT (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7KGB0_PARCT)

HSP 1 Score: 135 bits (340), Expect = 2.090e-37
Identity = 67/132 (50.76%), Postives = 88/132 (66.67%), Query Frame = 1 
Query:    1 QAEQIGVLRTNTMLYLQHLIGKAVLRRIFVCFPDPQFKRTTHRRRIVSPALLDEYAYMLREGGRVYTITDVEDVHVWMRDHGLEHPYFEPVPESDLKDDPWLPIMKLT-DEGKKAKREGRPHLVAVFQRVSD 393
            Q + I VLR N M YL +   K  L+++F  FPDP FK+  H+ RI+SP LL EYAY+L  GG VYTITDV D+H WM+ H +EHP FE VPE +  +DP +P + ++ +E KK  R G P L A+F+RV D
Sbjct:   75 QYQNINVLRGNAMKYLPNYFEKRQLKKLFFLFPDPHFKQKKHKWRIISPTLLAEYAYVLAVGGIVYTITDVPDLHEWMKKHFMEHPLFEEVPEDEQDNDPVIPKLGVSSEEAKKVTRNGGPKLTAIFRRVED 206
[Close]
BLAST of mRNA_M-pyrifera_M_contig72839.17300.1 vs. uniprot
Match: A0A5J5ENL4_9PEZI (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5ENL4_9PEZI)

HSP 1 Score: 137 bits (346), Expect = 2.140e-37
Identity = 70/130 (53.85%), Postives = 86/130 (66.15%), Query Frame = 1 
Query:    7 EQIGVLRTNTMLYLQHLIGKAVLRRIFVCFPDPQFKRTTHRRRIVSPALLDEYAYMLREGGRVYTITDVEDVHVWMRDHGLEHPYFEPVPESDLKDDPWLPIMKL-TDEGKKAKREGRPHLVAVFQRVSD 393
            E   VLR N M +L +L  KA LR++F+CFPDP FK   H+ RIVSP L  EYAY+LR GG VYTITDVED+H WM  H  +HP FE + E DL+DD  + +M+  T+EGKK  R G    VA F+R  D
Sbjct:  162 ENASVLRANAMKFLPNLFEKAQLRKLFLCFPDPHFKARKHKARIVSPGLCSEYAYVLRPGGIVYTITDVEDLHRWMAHHFEDHPLFERIAEEDLRDDVCVEVMRNDTEEGKKVARNGGQKWVACFRRRED 291
[Close]
BLAST of mRNA_M-pyrifera_M_contig72839.17300.1 vs. uniprot
Match: A0A0S7LT08_9TELE (tRNA (guanine-N(7)-)-methyltransferase n=10 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A0S7LT08_9TELE)

HSP 1 Score: 135 bits (341), Expect = 3.300e-37
Identity = 71/130 (54.62%), Postives = 85/130 (65.38%), Query Frame = 1 
Query:    7 EQIGVLRTNTMLYLQHLIGKAVLRRIFVCFPDPQFKRTTHRRRIVSPALLDEYAYMLREGGRVYTITDVEDVHVWMRDHGLEHPYFEPVPESDLKDDPWLP-IMKLTDEGKKAKREGRPHLVAVFQRVSD 393
            + I  LR+N M YL +   K  L ++F  FPDP FK+T H+ RIVSP LL EYAY LR GG VYTITDVE+VHVWM  H  EHP F  VPE DL DD  +  +   T+EGKK +R G    +AVFQR+ D
Sbjct:  111 QNIACLRSNAMKYLPNFFFKGQLSKMFFLFPDPHFKKTKHKWRIVSPTLLAEYAYTLRIGGLVYTITDVEEVHVWMVKHFSEHPLFARVPEEDLVDDVIISRLSSCTEEGKKVQRNGGKTYLAVFQRIED 240
[Close]
BLAST of mRNA_M-pyrifera_M_contig72839.17300.1 vs. uniprot
Match: A0A7L4EUZ4_HIRRU (TRMB methyltransferase (Fragment) n=7 Tax=Passeriformes TaxID=9126 RepID=A0A7L4EUZ4_HIRRU)

HSP 1 Score: 135 bits (340), Expect = 5.310e-37
Identity = 65/128 (50.78%), Postives = 88/128 (68.75%), Query Frame = 1 
Query:   13 IGVLRTNTMLYLQHLIGKAVLRRIFVCFPDPQFKRTTHRRRIVSPALLDEYAYMLREGGRVYTITDVEDVHVWMRDHGLEHPYFEPVPESDLKDDPWLPIMK-LTDEGKKAKREGRPHLVAVFQRVSD 393
            +  +R N M +L H   +A L ++F  FPDP FKRT H+ RI+SPA+L EY Y+LR GG VYT+TDV ++H WM  H  EHP FEP+P + L  DP +P++  +T+EG+KA+R GRP   AVF+R  D
Sbjct:  119 VACVRGNAMKHLPHFFRRAQLSKLFFLFPDPHFKRTKHKWRIISPAMLAEYGYVLRPGGLVYTVTDVPELHQWMVQHFGEHPLFEPLPPAQLAADPLVPLLPTVTEEGRKAERAGRPPCSAVFRRRPD 246
[Close]
BLAST of mRNA_M-pyrifera_M_contig72839.17300.1 vs. uniprot
Match: A0A6J2VMR0_CHACN (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2VMR0_CHACN)

HSP 1 Score: 134 bits (337), Expect = 1.750e-36
Identity = 71/132 (53.79%), Postives = 88/132 (66.67%), Query Frame = 1 
Query:    7 EQIGVLRTNTMLYLQHLIGKAVLRRIFVCFPDPQFKRTTHRRRIVSPALLDEYAYMLREGGRVYTITDVEDVHVWMRDHGLEHPYFEPVPESDLKDDPWLPIMKL---TDEGKKAKREGRPHLVAVFQRVSD 393
            + I  LR+N M YL +  GK  L ++F  FPDP FK+T H+ RI+SP LL EYAY LR GG VYT TDVE+VH+WM  H  EHP F  VPE DL DD  + I +L   T+EGKK +R G  + +AVF+RV D
Sbjct:  115 QNIACLRSNAMKYLPNFFGKGQLSKMFFLFPDPHFKKTKHKWRIISPTLLAEYAYTLRVGGLVYTNTDVEEVHLWMVKHFTEHPLFCRVPEEDLADD--VIISRLGTCTEEGKKVQRNGGKNFLAVFRRVED 244
[Close]
BLAST of mRNA_M-pyrifera_M_contig72839.17300.1 vs. uniprot
Match: UPI001B80C254 (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Onychostruthus taczanowskii TaxID=356909 RepID=UPI001B80C254)

HSP 1 Score: 134 bits (336), Expect = 2.230e-36
Identity = 64/128 (50.00%), Postives = 87/128 (67.97%), Query Frame = 1 
Query:   13 IGVLRTNTMLYLQHLIGKAVLRRIFVCFPDPQFKRTTHRRRIVSPALLDEYAYMLREGGRVYTITDVEDVHVWMRDHGLEHPYFEPVPESDLKDDPWLPIMK-LTDEGKKAKREGRPHLVAVFQRVSD 393
            +  +R N M +L H   +A L ++F  FPDP FKRT H+ RI+SPA+L EY Y+LR GG VYT+ DV ++H WM  H  EHP FEP+P + L  DP LP++  +T+EG++A+R GRP   AVF+R  D
Sbjct:   99 VACVRGNAMKHLPHFFQRAQLSKLFFLFPDPHFKRTKHKWRIISPAMLAEYGYVLRPGGLVYTVFDVPELHQWMLQHFGEHPLFEPLPPAQLAADPLLPLLPAVTEEGQRARRAGRPPCTAVFRRRPD 226
[Close]
BLAST of mRNA_M-pyrifera_M_contig72839.17300.1 vs. uniprot
Match: A0A482REK3_9ARCH (tRNA (Guanosine(46)-N7)-methyltransferase TrmB n=1 Tax=archaeon TaxID=1906665 RepID=A0A482REK3_9ARCH)

HSP 1 Score: 134 bits (337), Expect = 3.320e-36
Identity = 66/135 (48.89%), Postives = 88/135 (65.19%), Query Frame = 1 
Query:    4 AEQIGVLRTNTMLYLQHLIGKAVLRRIFVCFPDPQFKRTTHRRRIVSPALLDEYAYMLREGGRVYTITDVEDVHVWMRDHGLEHPYFEPVPESDLKDDPWLPIMKL-TDEGKKAKREGRPHLVAVFQRVSDEKAD 405
            A    VL TN M +L H   K  L ++F CFPDP FK+  H+RRI++ ALLDEYAY +REGG +YTITDV D+H WM  H   HP FE +P+   + DP +P+M+  T+EG+K  R      VA+F+R SD +A+
Sbjct:  118 ASNASVLMTNAMKFLPHFFFKGQLSKMFFCFPDPHFKKANHKRRIITTALLDEYAYCIREGGILYTITDVRDLHNWMVAHCKAHPMFERIPDELAEADPCVPVMRTYTEEGQKVARNKGMKFVAIFRRRSDAEAE 252
[Close]
BLAST of mRNA_M-pyrifera_M_contig72839.17300.1 vs. uniprot
Match: M7SZJ5_EUTLA (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Eutypa lata (strain UCR-EL1) TaxID=1287681 RepID=M7SZJ5_EUTLA)

HSP 1 Score: 134 bits (337), Expect = 3.920e-36
Identity = 69/130 (53.08%), Postives = 86/130 (66.15%), Query Frame = 1 
Query:    7 EQIGVLRTNTMLYLQHLIGKAVLRRIFVCFPDPQFKRTTHRRRIVSPALLDEYAYMLREGGRVYTITDVEDVHVWMRDHGLEHPYFEPVPESDLKDDPWLPIMKL-TDEGKKAKREGRPHLVAVFQRVSD 393
            + I  LR NTM +L +   KA L +IF+CFPDP FK+  H+ RIVS  L  EYAY+LR GG VYTITDVED+H WM  H   HP FE V E + + DP + IMK  T+EGKK +R   P  VA+F+R+ D
Sbjct:  154 QNIACLRANTMKFLPNFFRKAQLSKIFICFPDPHFKQRKHKARIVSTTLNSEYAYVLRPGGTVYTITDVEDLHNWMVQHLEAHPSFERVSEEEQEADPCVAIMKTETEEGKKVERNQGPKFVALFRRLDD 283
[Close]
BLAST of mRNA_M-pyrifera_M_contig72839.17300.1 vs. uniprot
Match: G2QY15_THETT (tRNA (guanine-N(7)-)-methyltransferase n=2 Tax=Thermothielavioides terrestris TaxID=2587410 RepID=G2QY15_THETT)

HSP 1 Score: 134 bits (336), Expect = 5.650e-36
Identity = 69/129 (53.49%), Postives = 90/129 (69.77%), Query Frame = 1 
Query:   13 IGVLRTNTMLYLQHLIGKAVLRRIFVCFPDPQFKRTTHRRRIVSPALLDEYAYMLREGGRVYTITDVEDVHVWMRDHGLEHPYFEPVPESDLKDDPWLPIMKL-TDEGKKAKR-EGRPHLVAVFQRVSD 393
            +GVLR NTM +L +   K  L ++F+CFPDP FK   H++RIVS  L  EYAY+LR GG VYTITDV D+H WM  H   HP FE VPE + + DP +PIM+  T+EGKK +R +G+ H VA+F+R+ D
Sbjct:  157 VGVLRANTMKFLPNFFRKGQLAKVFICFPDPHFKARKHKQRIVSTTLNSEYAYVLRPGGIVYTITDVPDLHEWMVQHFEAHPSFERVPEDEQEADPCVPIMRTETEEGKKVERHKGQKH-VALFRRLED 284
[Close]
BLAST of mRNA_M-pyrifera_M_contig72839.17300.1 vs. uniprot
Match: E3TE09_ICTPU (tRNA (guanine-N(7)-)-methyltransferase n=6 Tax=Siluroidei TaxID=1489793 RepID=E3TE09_ICTPU)

HSP 1 Score: 132 bits (332), Expect = 7.630e-36
Identity = 68/130 (52.31%), Postives = 86/130 (66.15%), Query Frame = 1 
Query:    7 EQIGVLRTNTMLYLQHLIGKAVLRRIFVCFPDPQFKRTTHRRRIVSPALLDEYAYMLREGGRVYTITDVEDVHVWMRDHGLEHPYFEPVPESDLKDDPWLPIM-KLTDEGKKAKREGRPHLVAVFQRVSD 393
            + I  LR+N M YL +   K  L ++F  FPDP FK+T H+ RI+SP LL EYAY LR GG VYT+TDVE+VHVWM  H  EHP F  V E +LKDD  +  +   T+EGKK +R G  + +AVF+RV D
Sbjct:  112 QNIACLRSNAMKYLPNFFTKGQLSKMFFLFPDPHFKKTKHKWRIISPTLLAEYAYTLRVGGLVYTMTDVEEVHVWMVKHFTEHPLFSRVSEDELKDDVIVGRLGTCTEEGKKVQRNGGKNFLAVFRRVED 241
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72839.17300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6S7KGB0_PARCT2.090e-3750.76tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Par... [more]
A0A5J5ENL4_9PEZI2.140e-3753.85tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Sph... [more]
A0A0S7LT08_9TELE3.300e-3754.62tRNA (guanine-N(7)-)-methyltransferase n=10 Tax=Cy... [more]
A0A7L4EUZ4_HIRRU5.310e-3750.78TRMB methyltransferase (Fragment) n=7 Tax=Passerif... [more]
A0A6J2VMR0_CHACN1.750e-3653.79tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Cha... [more]
UPI001B80C2542.230e-3650.00tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Ony... [more]
A0A482REK3_9ARCH3.320e-3648.89tRNA (Guanosine(46)-N7)-methyltransferase TrmB n=1... [more]
M7SZJ5_EUTLA3.920e-3653.08tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Eut... [more]
G2QY15_THETT5.650e-3653.49tRNA (guanine-N(7)-)-methyltransferase n=2 Tax=The... [more]
E3TE09_ICTPU7.630e-3652.31tRNA (guanine-N(7)-)-methyltransferase n=6 Tax=Sil... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig72839contigM-pyrifera_M_contig72839:309..713 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score139.8
Seed ortholog evalue9.3e-31
Seed eggNOG ortholog181119.XP_005532113.1
Preferred nameMETTL1
KEGG koko:K03439
Hectar predicted targeting categoryother localisation
GOsGO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0031974,GO:0031981,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234
EggNOG free text desc.Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
EggNOG OGs38EJS@33154,3BGW2@33208,3CZXB@33213,485YM@7711,493ZQ@7742,COG0220@1,KOG3115@2759
EC2.1.1.33
COG Functional cat.J
Best tax levelVertebrata
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Exons1
Model size405
Cds size405
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816625.6458619-CDS-M-pyrifera_M_contig72839:308..7131622816625.6458619-CDS-M-pyrifera_M_contig72839:308..713Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72839 309..713 -
1692278084.6429446-CDS-M-pyrifera_M_contig72839:308..7131692278084.6429446-CDS-M-pyrifera_M_contig72839:308..713Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig72839 309..713 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig72839.17300.1prot_M-pyrifera_M_contig72839.17300.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig72839 309..713 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig72839.17300.1

>prot_M-pyrifera_M_contig72839.17300.1 ID=prot_M-pyrifera_M_contig72839.17300.1|Name=mRNA_M-pyrifera_M_contig72839.17300.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=135bp
QAEQIGVLRTNTMLYLQHLIGKAVLRRIFVCFPDPQFKRTTHRRRIVSPA
LLDEYAYMLREGGRVYTITDVEDVHVWMRDHGLEHPYFEPVPESDLKDDP
WLPIMKLTDEGKKAKREGRPHLVAVFQRVSDEKAD
back to top

mRNA from alignment at M-pyrifera_M_contig72839:309..713-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig72839.17300.1 ID=mRNA_M-pyrifera_M_contig72839.17300.1|Name=mRNA_M-pyrifera_M_contig72839.17300.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=405bp|location=Sequence derived from alignment at M-pyrifera_M_contig72839:309..713- (Macrocystis pyrifera P11B4 male)
CAGGCAGAGCAAATTGGGGTGTTGCGGACGAACACGATGCTGTATTTGCA
GCATTTGATCGGAAAGGCGGTGTTGCGTCGCATTTTCGTGTGTTTCCCGG
ACCCCCAGTTCAAGCGGACGACGCACCGTCGGCGCATCGTTTCGCCGGCG
CTGTTGGATGAGTATGCGTACATGCTGCGCGAAGGAGGGCGCGTGTACAC
GATCACCGACGTGGAAGATGTGCATGTGTGGATGCGTGACCACGGGTTGG
AACACCCCTACTTTGAACCCGTCCCAGAGAGCGACCTCAAGGACGACCCG
TGGCTGCCTATCATGAAGCTCACCGACGAGGGCAAGAAAGCCAAGCGAGA
AGGCAGGCCGCATCTCGTCGCCGTCTTTCAGAGGGTCAGTGACGAAAAGG
CCGAT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig72839:309..713-

>mRNA_M-pyrifera_M_contig72839.17300.1 ID=mRNA_M-pyrifera_M_contig72839.17300.1|Name=mRNA_M-pyrifera_M_contig72839.17300.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig72839:309..713- (Macrocystis pyrifera P11B4 male)
CAGGCAGAGCAAATTGGGGTGTTGCGGACGAACACGATGCTGTATTTGCA
GCATTTGATCGGAAAGGCGGTGTTGCGTCGCATTTTCGTGTGTTTCCCGG
ACCCCCAGTTCAAGCGGACGACGCACCGTCGGCGCATCGTTTCGCCGGCG
CTGTTGGATGAGTATGCGTACATGCTGCGCGAAGGAGGGCGCGTGTACAC
GATCACCGACGTGGAAGATGTGCATGTGTGGATGCGTGACCACGGGTTGG
AACACCCCTACTTTGAACCCGTCCCAGAGAGCGACCTCAAGGACGACCCG
TGGCTGCCTATCATGAAGCTCACCGACGAGGGCAAGAAAGCCAAGCGAGA
AGGCAGGCCGCATCTCGTCGCCGTCTTTCAGAGGGTCAGTGACGAAAAGG
CCGATCAGGCAGAGCAAATTGGGGTGTTGCGGACGAACACGATGCTGTAT
TTGCAGCATTTGATCGGAAAGGCGGTGTTGCGTCGCATTTTCGTGTGTTT
CCCGGACCCCCAGTTCAAGCGGACGACGCACCGTCGGCGCATCGTTTCGC
CGGCGCTGTTGGATGAGTATGCGTACATGCTGCGCGAAGGAGGGCGCGTG
TACACGATCACCGACGTGGAAGATGTGCATGTGTGGATGCGTGACCACGG
GTTGGAACACCCCTACTTTGAACCCGTCCCAGAGAGCGACCTCAAGGACG
ACCCGTGGCTGCCTATCATGAAGCTCACCGACGAGGGCAAGAAAGCCAAG
CGAGAAGGCAGGCCGCATCTCGTCGCCGTCTTTCAGAGGGTCAGTGACGA
AAAGGCCGAT
back to top