mRNA_M-pyrifera_M_contig7260.17252.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7260.17252.1
Unique NamemRNA_M-pyrifera_M_contig7260.17252.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig7260.17252.1 vs. uniprot
Match: A0A6H5L825_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L825_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 2.120e-81
Identity = 123/164 (75.00%), Postives = 133/164 (81.10%), Query Frame = 1
Query:    1 RHYYSNAVQANPYHAVAHFNLGLLLHDEDIDSAVEHYQSAVEMDPAMADAWSNLGSAYHHENDLEDALGCYQEAIRLYETEETYQGLPFTSDVLATLNYHTSMVLNRLPDGRCLEGGCESQRMEVLRRCLRHDPEHALCKHSLESTLGGSSMTKASPAYVKVQY 492
            RHYYS AVQANPYHAVAHFNLGLLLHDEDID+A+EH                   SAYH E+DLEDALGCYQEAIRLYETEE Y+GLPFT DVLATLNYH S++L RLPDGRCL+GGC SQRME+LRRCLRHDPEHALCKH+LES LG SSMTKASP YVK  +
Sbjct:   87 RHYYSKAVQANPYHAVAHFNLGLLLHDEDIDTAIEHXXXXXXXXXXXXXXXXXXXSAYHREDDLEDALGCYQEAIRLYETEEAYEGLPFTDDVLATLNYHVSIILGRLPDGRCLQGGCLSQRMEILRRCLRHDPEHALCKHNLESALGDSSMTKASPEYVKALF 250          
BLAST of mRNA_M-pyrifera_M_contig7260.17252.1 vs. uniprot
Match: A0A835YWA3_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWA3_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.930e-13
Identity = 51/167 (30.54%), Postives = 78/167 (46.71%), Query Frame = 1
Query:   10 YSNAVQANPYHAVAHFNLGLLLHDEDIDSAVEHYQSAVEMDPAMADAWSNLGSAYHHENDLEDALGCYQEAIRLYETE-ETYQGLPFTSD---------VLATLNYHTSMVLNRLPDGRCLEGGCESQRMEVLRRCLRHDPEHALCKHSLESTLGGSSMTKASPAYV 480
            Y  AV ANPYHA+A +NL LLLH++                         LG+AYH +     A+  Y EA+ L+  + E  +  P  +D          LA L+      + R+PD  C + GC +  +E L   L++DP++ L +HSL + L    +  +SP Y+
Sbjct:   80 YRAAVAANPYHAMASYNLALLLHNDAPQEXXXXXXXXXXXXXXXXXXXXXLGAAYHAQQMYAQAVPHYLEAVELFTAQLEAERASPAAADDALIGQYTSYLAVLHARCGEAMVRMPDSECGDAGCVADAIEHLTMSLQYDPDNELTRHSL-AALREERVQASSPEYI 245          
BLAST of mRNA_M-pyrifera_M_contig7260.17252.1 vs. uniprot
Match: A0A137Q5R4_9AGAR (Uncharacterized protein n=1 Tax=Leucoagaricus sp. SymC.cos TaxID=1714833 RepID=A0A137Q5R4_9AGAR)

HSP 1 Score: 52.8 bits (125), Expect = 5.590e-5
Identity = 43/155 (27.74%), Postives = 70/155 (45.16%), Query Frame = 1
Query:   10 YSNAVQANPYHAVAHFNLGLLLHDEDIDSAVEHYQSAVEMDPAMADAWSNLGSAYHHENDLEDALGCYQEAIRLYETEETYQGLPFTSDVLATLNYHTSMVLNRLPDGRCLEGGCESQRMEVLRRCLRHDPEHALCKHSLESTLGGSSMTKASPA 474
            +  A Q +P  A A+   G    DED+D A+  +QSA+  DP   +AW  LG+ Y  ++ +  A   Y++A+ ++       G                MV +    G+    GC+ + +E+  R +R  PE+AL ++     L   SM K  PA
Sbjct:  598 FRRAAQLDPACAYAYTLSGHESIDEDLDKAINFFQSALRADPRHYNAWYGLGTCYLRQSKVRLAEYHYRKALEIHPRSAVLMGC-------------VGMVSSHF--GKNF--GCDEESLELFDRAVRLAPENALVRYRRAKIL--VSMRKYEPA 733          
BLAST of mRNA_M-pyrifera_M_contig7260.17252.1 vs. uniprot
Match: A0A556THL1_BAGYA (Transmembrane and TPR repeat-containing protein 1 n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556THL1_BAGYA)

HSP 1 Score: 52.0 bits (123), Expect = 7.460e-5
Identity = 34/92 (36.96%), Postives = 47/92 (51.09%), Query Frame = 1
Query:    7 YYSNAVQANPYHAVAHFNLGLLLHDE-------------DIDSAVEHYQSAVEMDP----AMADAWSNLGSAYHHENDLEDALGCYQEAIRL 231
            YY  A+  NP H  A FNLG LL+ +             D + A  HYQ AV++ P    AM D  + LG+ Y++    E+AL  Y+EA+ L
Sbjct:   74 YYKQALDINPQHNRALFNLGNLLNSDLHNNYGVFLVDTGDGERAAVHYQHAVQLKPSHYVAMVDILTPLGALYYNTGRYEEALELYREAVSL 165          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7260.17252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L825_9PHAE2.120e-8175.00Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A835YWA3_9STRA1.930e-1330.54S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A137Q5R4_9AGAR5.590e-527.74Uncharacterized protein n=1 Tax=Leucoagaricus sp. ... [more]
A0A556THL1_BAGYA7.460e-536.96Transmembrane and TPR repeat-containing protein 1 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7260contigM-pyrifera_M_contig7260:153..8295 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score261.2
Seed ortholog evalue3.4e-67
Seed eggNOG ortholog2880.D8LBV8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein N-acetylglucosaminyltransferase activity
EggNOG OGsCOG3914@1,KOG4626@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size492
Cds size492
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7260.17252.1prot_M-pyrifera_M_contig7260.17252.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7260 153..8295 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816622.523652-CDS-M-pyrifera_M_contig7260:152..2661622816622.523652-CDS-M-pyrifera_M_contig7260:152..266Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7260 153..266 +
1692278082.5722036-CDS-M-pyrifera_M_contig7260:152..2661692278082.5722036-CDS-M-pyrifera_M_contig7260:152..266Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7260 153..266 +
1622816622.5339465-CDS-M-pyrifera_M_contig7260:1002..10971622816622.5339465-CDS-M-pyrifera_M_contig7260:1002..1097Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7260 1003..1097 +
1692278082.5865483-CDS-M-pyrifera_M_contig7260:1002..10971692278082.5865483-CDS-M-pyrifera_M_contig7260:1002..1097Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7260 1003..1097 +
1622816622.5464904-CDS-M-pyrifera_M_contig7260:4497..45941622816622.5464904-CDS-M-pyrifera_M_contig7260:4497..4594Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7260 4498..4594 +
1692278082.598963-CDS-M-pyrifera_M_contig7260:4497..45941692278082.598963-CDS-M-pyrifera_M_contig7260:4497..4594Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7260 4498..4594 +
1622816622.5580044-CDS-M-pyrifera_M_contig7260:5125..52331622816622.5580044-CDS-M-pyrifera_M_contig7260:5125..5233Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7260 5126..5233 +
1692278082.609409-CDS-M-pyrifera_M_contig7260:5125..52331692278082.609409-CDS-M-pyrifera_M_contig7260:5125..5233Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7260 5126..5233 +
1622816622.5710385-CDS-M-pyrifera_M_contig7260:8217..82951622816622.5710385-CDS-M-pyrifera_M_contig7260:8217..8295Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7260 8218..8295 +
1692278082.6188636-CDS-M-pyrifera_M_contig7260:8217..82951692278082.6188636-CDS-M-pyrifera_M_contig7260:8217..8295Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7260 8218..8295 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7260.17252.1

>prot_M-pyrifera_M_contig7260.17252.1 ID=prot_M-pyrifera_M_contig7260.17252.1|Name=mRNA_M-pyrifera_M_contig7260.17252.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=164bp
RHYYSNAVQANPYHAVAHFNLGLLLHDEDIDSAVEHYQSAVEMDPAMADA
WSNLGSAYHHENDLEDALGCYQEAIRLYETEETYQGLPFTSDVLATLNYH
TSMVLNRLPDGRCLEGGCESQRMEVLRRCLRHDPEHALCKHSLESTLGGS
SMTKASPAYVKVQY
back to top

mRNA from alignment at M-pyrifera_M_contig7260:153..8295+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7260.17252.1 ID=mRNA_M-pyrifera_M_contig7260.17252.1|Name=mRNA_M-pyrifera_M_contig7260.17252.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8143bp|location=Sequence derived from alignment at M-pyrifera_M_contig7260:153..8295+ (Macrocystis pyrifera P11B4 male)
AGGCATTACTATTCGAACGCCGTCCAGGCCAACCCGTACCACGCAGTGGC CCACTTCAATCTCGGCCTTCTGCTGCACGACGAGGACATCGATTCGGCGG TGGAGCACTATCAGGTGAGAGTGGGAGGGAGGGGGAGGGGCTGGAGAGGG AGGGAGGGGGGTGCGCTCGTGTCGTGCATGGCCGTAGTCGTCTGACCGTA GACCCTCGCCTCCCTACCATACAGGTCGATACCGGTACCCGATACTTGGA TAGGTTCGGCACTAGGCCCACCAGCAACACCCGGGGTACATACCGGTATG CCCCATTTACCGAATGCACACACTCCCTTGGAGGATTCCGGGGGATTTTT TTTTCGGAATTCGAGTTGGGGCTCAAAATTGCAACCCCTAATTTCAACCC CCGCCTTGAGACGGGTCTCGTATGGTATACACCACCAAGGTATCGAATAT CGCGCATGCCAGGTATCGTTTTTTTGTGCAGTAAAGCTGGGTACTGACGC AGCAGTATGTACTGGCAGCAGTAATCCACTGGCAGTGGTATTCTCCTGAT CGACCCGGCCAGTATATCCGCCAGTAGTTTTACTTCACGTACGCGCAAGA AACACGCCATATTGCAAGTACCAAAACCCACCGAATGCGTTTCGGGGGGG AGAGAGAGAGAGTAGAAGACAGGAGAGACAGCGTGCTGCTGGAACCCAGT AAACTGATTGATTTTAACCACGGTGTAATCGCTGCCGACTGAGTCAGCCA GTGCCCAGCCCTGTTGTGTGTCCTTTTGTTTTTTTTATTCGGAGCCGTAG CGCGATCGAAATTGATTCTCCTTCGAAATTCATCGCTGTTGAACCCTCAG AGCGCCGTGGAGATGGACCCGGCAATGGCGGACGCGTGGAGCAACCTCGG CAGCGCCTATCACCATGAAAACGACCTTGAAGATGCCTTGGGGTGGTAAG CTTGTTTCTCCAGGGTATCGCTCATACGCAGGCTGCAGTGTTCACTAGTA CGGGTTGCTTGTGCCGTCGTCGCACTCTTGCCTCCATCCACTACGTCTCT GAATATTGGAACCTTTTTTGGTATTTATTTATGGTCAATCCAAAATGTTC TTATACTTGAGAACATGGTTGTGTGATGGACGGAAATGTAATGACCGTCC CGTCTAGACTTCACATTTATGATTAGACGCTCCTTGGACGGGCATTTGGA GCCCATCTTAACGGGGAACACTAAATTTCGCTCAATCAGATGCAAATTAA ATTAGAAAAAAAAAATCGAGTCAAATTGAAAGAACCAAAAGTCCTCGATA AGATAGGCCCTTAAATTAAACTAGAGGAAAAAAATCAGGTCAAATTGAAA GAACCGAAAGTCCTCGATAAGATGGGCCCTTAAATTAAACTAGAAAAAAA AAATCAAGTCAAATTGAAAGAACCGAAAGTCCTCGCTAAGATGGGCCCTT AGGGACAGTCTAGACTTCATACTTATGGTTGAACGCTCCTCACTTTTTTC CGTTTTTTGTTTCCTGTCTTGGCTAGGGCGCCCGGAAGAAAAAGGGTGAA GCGTCACAGAAGTTGTTTTCGCTAGACAGGGGGGGGGGGGTTACTAGAAC CAAGTGCAAAAAAAATAAAAAGAGTGAAAGAAAAAAAGTTACATTTTTTT TTCTTATTTCATCTAAGAAATGTGATCACAACGGTTGAAACGGTTTTCCA TTCCAGACCTCTGGTGGTGTAGTGCGTCGTTTCTTTTCTTTTTGACGGAC GTCGCTCCCGTCTGAGGTGTGCTTTTGTTGTTGTTCTTGTTTTCCCTGAG GCGTTCTGTTACTCCAGAGTTGTTGGAGCCTGTCCTCTGCAATGCGGGAT CAACAACAACAACAACGACAGCAGCAACAGACAGTAGGGTAGCCGACGCC ATTTTTGGGTGTTCTTTGCTTGCCCCGTTTAGGTACTGTACATAGATGGT ACCTGCTATCAGGCATGTTTTTGGTTGTTTAGAGTTTGTTGAAACATTTA GAGACTGACCCTCGAAGATCGTTTTTTTAAAAGAGGTTTTCGAGACTGCA AGGAACAAGCGTGGTGGTTTTTTACACGAGAGATTTAAGAGATTTACCGA CAGGTACAAATATTTTGATAATTTGGAGGTTTTGAGGTTTCTTGAGGCTG GATTTGCGAATAATGGTATGAGCGCCGACTTCAGCGCCAGAAAGGTATGA CGAATTTGCAACCTGCACTGAATTAAGCCCGTACTGCGCTCGGAGCACCG CTAACGATCGGTGGGACCAGACGGGCATCGGATGTGAGTGACGTCCTGCT TAAATTCAACGGTAACCTTGTCCCTGCATGAAGTCACAACAGTAACCTTG TCCCTGCGTGAAGTCCACGGCAACCTTGTCCCTACGTGAAGTCAACGATA ACCTTGTCCCTGGGTGAAGTCAACGGTAGCCTTGTCCCTGCGTGAAGTCA ACGGTAACCTTGTCCCTGGGTGAAGTCGACGGCAGCCACATGTCTGAAGA GTTTCAACGATAACCCGTGTAAGGCTGTTTGCAACCCCTGCATGGATTCG AAGTGGCGCTATTTATGACGTCCACGGTAAACCCTTGTGTGAGGCCAACA GTAACCTTTGTGAGGGTAACGGTAACCTCTGGCTTGAAGTCAACGGCAGT CCCGCGCCTTGTTGAAGTTGAGCGGCAACCCTGCGTGACGTCGGTGGCAA CTCCCGTGCCCGTGTGAAGTCAACGGTATCCTTTGTGTGAAGTCAACGGT CATTCCTTCCCCGTAAAAAGTCGATGGTATAGTAGCCACCTGTGTACAGT CAACGGTATCCACCAGCATGAGCTCAACGGTGGCCCTGTGCGAGGTCAAC GGTAATTCCGTCCCTGCTGTTTTTCTCCACCTGTACGAGGTGACCGCTAC CCCCCTTCATGCGGTCAACGGTAATCACCTGTGTGAGGTCGACGGTAGCC CAGTATGAACTCAACGGTAGCCATTTCGTGAAGGCAACAGTGACGCCCTA TGGCAAGTCTGAGACCGCAACCCCTATGTGGAGTCAACGGTACCCACCTT TGTGAAGTCATCGGGAACACCCTTCGTTGGGGTCAGCGGCAACCTCCTGT GTGAATTCAACGGATGTCTCCCGTGTGACTGATTTCAACGGTTAGCCCGC TGTTTGACGCCAACGGTAACCGCCTGTGTGACTGATCTCAACGGAAGCCC GCTGTTTGACGGCATCGGTAGCCGCCTGTGGGAATGATTTCAACGGTAAC CCCCTCTGTGTGAAGTCAACGATTTCAAGGAGGCCCGCTGCTTGACGTCA ACGGTAGTCGCGTGCGTGAACGATTTCAACGGTAACCCCCTCTGTGTGAT TTCAACGGTAACCTTGTGTGTGGGCGTCGTCCACCCCTACCCCTCGCTTC CGATGCACACGCGGCGCCCTCGCCGCCGTCAACACCGCCACGACCACCGC CGCCATGACTAGGGCAGCGTTGCCTCGACTTTCACACGTCGGACTTTGTG ATGATCTGCAGATAGATCATCTGCTGTAGATCATGTACAGATCCTAGCCT GCCGCTAGATGAGATGTTGAGCAGCATCCGTCTACCGTACTACATGTTCT ACCCAGGAAAAATTGTGCCCGGGCAGGCAGAGATGATACGGCTTCCGCGC GGCAAAACATGAACCGCGGCAGATCATGCAGATCAGGAATATGTCCGCCC CGAAGGATCTAGATCATGAAGTTGAGAAAGACCTGTTGGATGATCTGCCC CCGATGTTATGCAAGCACTGTTCCACAGTAGAATGTTGACAGAACTGCAC GCATGTGTTTTTTTGGGTGGATATTCCCGGGTCTCGATCGTGTCCGATCG GGGGTACACGAAAAAATAGAGGAAACCCAGCGGTACTCGCCCCGGCGTCG GAATCGAAAGAACACTATTAAATAGCGGGTTGGGGATTCTTGTCACAAAT GATGCAAAACGTGTTTTTTTTTCAGATCTAGTTTTTTTTTACTCCATATT AGTGTACCCTCCCCTGTCTGATACTCAAAAGCAAAAGTAGAGTGTCTTTT TTTTTTTTTCTCGTATACCCTCGGTCCGATGGTTGATAATGATGATGATG ATGATGGTGATGGTGATGATCTGACATTTTGCAGCTCATGTCCCTGAACC CTATAATAGTACCTGCTTCCTCGTATGAGTTTGATGGCTATACCTGGGTC CCATTCGAAGATCCGGTCGATACGGCGACCTACCTGTCTGATGATACTAC CACGATGATCTGGCATTTTTTTAGCTCGCTTCCCTGAATTCCACGACTTG TGTCTTTTCGCTTCTTGTTTCTGCCATGTTCGGTCCTCGGTGCAGCTATC AGGAGGCGATCAGGCTGTACGAGACAGAGGAGACGTACCAGGGGCTACCC TTCACAAGCGACGTCCTTGCTACGCTTAACTACCACACTTCGGTCAGCTG TGCTTTTCCTTGTGGATGTCGCACTGTAGATGATACCTGGTATATATGTA CAGTTGTTGCCCCTCTATAGTGCCGGTAGAGTGCTGCCGTTTGACCGTTG TAGTCGACGCTGCTGCGGGCCTCCGAAATATACCTGAAACCCCTGAAAAA CACTCTTTTTGGCGGGTTTTGAAGGCCGTTCCAAACAGAAAAAAATCGGG TCGCAGTCGGAATCTGGAATAGGTGGTTATACAGGTCTCCACGCAGTAAA AAAAACTTCACTATGGACGTATAATGAGTTCCAGCCAAAGCCATGCAGTA CGTCTGGTATACTATGTTCAAGTTGTTTTGGGACACCAGGCAGGCTGAAT TGCTGAGGGTTTTTCAGTCTGTTGAAATGTTACGTTTGGTGAACAGCTCA TCGATTAAATCTGCCGCATCTTTGTGGTCGTTAGGCACCTCAGTCCCAGG GCTAACTATTGTGTCTTGTGCTTCTTTGCTTTTACTTGTTATGCTCTCCT GGCGGATGGATTCGCGCGCGCAGATGGTCCTGAACAGACTCCCCGACGGG CGCTGCCTTGAGGGAGGCTGCGAATCCCAGAGAATGGAGGTTCTCCGGAG ATGTCTCCGACACGACCCGGAGCACGCGTTGGTAAGCTGTATACGCATTC GAGTACGTAGCGAATATGGGCGGGCGGGGATGCTAGATTGTCGTCCACTG GTCACGTGCAACTTCCAATTGTAGCGGCCGAGTGTAACAGTCGAGTGTAA CGGTCGAGTGTAACGGTCGAATGTAACGGTCGAGTGTAACGGCCAAGTGT AACAGTCGAGTAAAACGGCCACTTGTAGCGGTCAAGTGTAACAGTTGAGT GCAACGGTCAAGCGAAACGGTCCAGTGGAACGGTCAAGTGTAGCAGCCAA TTGTACTCGTCAGGTGTAACGGGTGTAACGGTCAAGTGTATCGGTCGAGT GGCTTAGTGTATCGATCAAGTGTAGCGGCCAAATGTAACGGTCGAGTTTA ACGGTGGAATGAATCGGTCAACTGCAACGGTCGAGTGTAACGACTAAGCG TAATGGTCAAGTGCAACGGCCAATTATAGTGGTCAAGTGTGACGGTTAAG TGTAACGGATAAGTGTAACGGTCAAGCAAAACAGTCAAGTGTACCGTTCA GATGTGACGATCAAGTTTAACGGCCAACGGTAGCGGTCAAGTACAACGGT CAAGTGTAACTTCCAAATGTAGCTGTCAAGTGAAGCGGTCAAGTGTAACG ATCAAGTGTAACGGTCAAGTGCAACGGTCCAGTGTAATAGTCAGGTATAA CCGCCAGGTGTAACGGTCAAGGAAAATAGCCTATTGTGGCGATCAAGTGG AAGAATCAAGTGTAACGATGAAGTGTAACGGCGAAGTGAACCGGTCTAGA GTAACGGTCAAGTATAACGGCGAACTTTAACAGTCAATTGTAACGGCCGA GTGAAACTGTTTGGGATAACGACAATCGTGACGGTCAGGTGTAACGATCA GGTGCAATATTCAAGTGGAACGTTCGATTGTAGCGGTCGATGGTGATTAA GAAGTGTAGCGGTCAAGTGTAACAATCAAGGGAACGGTCCAGTGCAACGG TCAAGTGTACGTTTCAAGTGTAAATGTCAAGTGTAATGGCAATTGGTAGC GGTCAAGTGGAAACGTCACGTGTAACGGCCAACGGTCCAATGAAGCGGGG AGTGTAACTGCCAAGTGCCACGGACGAACAAGTGTAGCGGTCAAGTGTAG TGGCCAAGTGTAACGGCCAAGTGTAGCGGTCATGTGTCAAAACGGTCCAG TGTAACGGTCAGGTGTAACGGTCAAGTAAGGTAACAATCAAGTGTAAAGG TTAAGTAAGCGGCCAACGGACACGTGTAGCGGTCAACTGTAACTGTCAAC TGTAACGGTCAATTGCAGGGGTGAAGTATAGCTTTCAGGTGTAACGGCCG AGTGTCACGGTCAAGTGTAGCGGTCGAGTGCAACGGTCAAGTGAAACGGT CAAGTGTAGCAGTCAGGTGTAGCGGTCAAACGTATCGGTCCAGTGTAACG GTTAACGGTAGCGGTCAGATGTATCGATCAAGTGTTACGGTCACGTGTGA CCATCAAGTGAAGCGATCAAGTGTACGCTCGTAACGGACGATTGTAATGG CCAAGTCTAGCGATCACATGTAACGGTTAAGCGCAACGGTTAAGTGAATG GCCAAGTGTAACGGTCAAGTGCCCCGGTCAACTGTATCGGCCAAGAGAAA CAGTCAGGTGTAACCTTCAATTTTAACGACCAAGTGCGACGGTCAAGTTG TAGCGGTCAAGTGTAACGGTCATGTAAAACGTTCGAATATATACCAAGTA TTATCATTGTCGCACTTAATACGCGTGTGTCTGTTTTTTGTTTGTTTTTT TGTTTTTTTTACACTTGAGTCGTGGAACTGGCTGTCGTCCTGGCGCCCTA GCTGAGTTTTTTTTTTTCTGGTTTTGTTTTCGTACCTACTGCTGTACGTG TGGACACCTTGTGGCCTCTTCGTGACGTTGGGGCTAGACGGTGGCAACAG GCTGACGTACACGTATGGACTCCTCGCGGCATTTTTTTTTTACCTTAGGG TGTATTTTGGCGATGAGCGTACTGTACCTGTGGATTCCTTGTGACCTTTT TGTGGCCTTAGGGCTAGATTGTGACAATGGGCTACACCACTACGACCGAG GAGTCCTTGCTGTGACCTCGGGGGCTACGTTGTGGCGATGAGCTACGAAT GCACCTGTAAATTCCTTGTGGTCTTTTTTGCGACTACGGACTACTTACTG TAGATCATGGTACTTTTGACGGGGGACCTATAGTAAATAGGACCAAATAT TGTTGGTAAAAACGGGAGAATGTATAGGTTTTGTGTGTACCGTAGGCCCT GTTTACTATGGTTCCCCGCAATGGGTGTAATGTACCGGCAGAACCCTTGT TGCTCTCGCGCAAGCGCGTGCTAGATCATGGCAGTGAGCTACAATAATGT ACCTGTACGCGCGCAGCTTCCGTGCTGATTCCTTTTCGCAACCACGAGCT ATAGATCATGGTAACCAGCCAATGCACCCTACAGACTCCTTGATGCTTTT CGCAACCGCGGCCTCGGCTTCGGTCATGAGCCAGCGTGCTTGGTGATGGG CTAGTGTACTTGAGCTCCGTACTTGAGCTGATGCACTTGATAATGATCTA AGGTGTCTGTAGTCTGGGCTGCTTGTACTTATTTTGTGGCCGCAGACTAG ACTATGGCACTTAGCTAGAGTACCTCTAAGTTGAATCCCTTGTTGTTTTC CGCTACCACGAGGTAGATCACGTCAATGGGTTATCGTACCTGCAGTCTTC TCGAGCTTTTTTTGTTTTTCCCGGTGGCCACAGGGCTATCAGTTTGTGAC CGAAACTATTAAGGTATTTTTGGCACCTACTGTAGTGTGGCAAGCGAAAT GCACCTTACATACTCGATCAAAGACTGGTACATGCATGCAAACTGTGGCA AAGAGGTGGAATGAGACCGACACCAATAGACCGCCGCGTCTTCTGCTGTC GCTAAACTGCTTGCTGTTGCCCCTTTTCGTTCTTCTTTTTTGCTTGTTTT CTCGACCCGCGTCAGTGCAAGCACTCGCTGGAGAGCACCCTGGGGGGTTC CAGCATGACGAAGGCGTCGCCCGCCTACGTGAAGGTGCAGTAC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig7260:153..8295+

>mRNA_M-pyrifera_M_contig7260.17252.1 ID=mRNA_M-pyrifera_M_contig7260.17252.1|Name=mRNA_M-pyrifera_M_contig7260.17252.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=984bp|location=Sequence derived from alignment at M-pyrifera_M_contig7260:153..8295+ (Macrocystis pyrifera P11B4 male)
AGGCATTACTATTCGAACGCCGTCCAGGCCAACCCGTACCACGCAGTGGC
CCACTTCAATCTCGGCCTTCTGCTGCACGACGAGGACATCGATTCGGCGG
TGGAGCACTATCAGAGGCATTACTATTCGAACGCCGTCCAGGCCAACCCG
TACCACGCAGTGGCCCACTTCAATCTCGGCCTTCTGCTGCACGACGAGGA
CATCGATTCGGCGGTGGAGCACTATCAGAGCGCCGTGGAGATGGACCCGG
CAATGGCGGACGCGTGGAGCAACCTCGGCAGCGCCTATCACCATGAAAAC
GACCTTGAAGATGCCTTGGGGTGAGCGCCGTGGAGATGGACCCGGCAATG
GCGGACGCGTGGAGCAACCTCGGCAGCGCCTATCACCATGAAAACGACCT
TGAAGATGCCTTGGGGTGCTATCAGGAGGCGATCAGGCTGTACGAGACAG
AGGAGACGTACCAGGGGCTACCCTTCACAAGCGACGTCCTTGCTACGCTT
AACTACCACACTTCGCTATCAGGAGGCGATCAGGCTGTACGAGACAGAGG
AGACGTACCAGGGGCTACCCTTCACAAGCGACGTCCTTGCTACGCTTAAC
TACCACACTTCGATGGTCCTGAACAGACTCCCCGACGGGCGCTGCCTTGA
GGGAGGCTGCGAATCCCAGAGAATGGAGGTTCTCCGGAGATGTCTCCGAC
ACGACCCGGAGCACGCGTTGATGGTCCTGAACAGACTCCCCGACGGGCGC
TGCCTTGAGGGAGGCTGCGAATCCCAGAGAATGGAGGTTCTCCGGAGATG
TCTCCGACACGACCCGGAGCACGCGTTGTGCAAGCACTCGCTGGAGAGCA
CCCTGGGGGGTTCCAGCATGACGAAGGCGTCGCCCGCCTACGTGAAGGTG
CAGTACTGCAAGCACTCGCTGGAGAGCACCCTGGGGGGTTCCAGCATGAC
GAAGGCGTCGCCCGCCTACGTGAAGGTGCAGTAC
back to top