mRNA_M-pyrifera_M_contig72596.17250.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig72596.17250.1 vs. uniprot
Match: A0A5A8EH26_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EH26_CAFRO) HSP 1 Score: 182 bits (461), Expect = 7.390e-51 Identity = 89/116 (76.72%), Postives = 96/116 (82.76%), Query Frame = 1 Query: 1 IVRNSARWPLMIDPQLQGIKWVTKMESEAGLATVRLGQKDMLRRLEHAISNGEPVLIENMGESIEAVLNPVIARATTKRGVGRLTLQLGDKEIDYNPSFRLYLHTKLPNPHYPPEI 348 IV N+ARWPLMIDPQLQGIKWV K E E L VR GQK ML LE AI++G PVLIENMGE IEAVLNPVI+RATTKRG R TLQLGDKE+DY+P FRLYLHTKL NPHYPPE+ Sbjct: 3039 IVTNTARWPLMIDPQLQGIKWVMKHEEENDLKVVRQGQKKMLATLEAAIASGAPVLIENMGERIEAVLNPVISRATTKRGASRFTLQLGDKEVDYHPDFRLYLHTKLSNPHYPPEV 3154
BLAST of mRNA_M-pyrifera_M_contig72596.17250.1 vs. uniprot
Match: A0A482UFV3_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UFV3_9ARCH) HSP 1 Score: 158 bits (400), Expect = 8.260e-43 Identity = 78/116 (67.24%), Postives = 91/116 (78.45%), Query Frame = 1 Query: 1 IVRNSARWPLMIDPQLQGIKWVTKMESEAGLATVRLGQKDMLRRLEHAISNGEPVLIENMGESIEAVLNPVIARATTKRGVGRLTLQLGDKEIDYNPSFRLYLHTKLPNPHYPPEI 348 IV + RWPL+IDPQLQGI WV + E E GL +RL QKDMLRRLE A+ G PVLIENMGE I+AVL PVIARA K+G + L+LGDKE+++NP FRLYLHTKL NPHYPPE+ Sbjct: 71 IVTATERWPLLIDPQLQGITWVREKEKENGLLIMRLDQKDMLRRLESALERGVPVLIENMGERIDAVLQPVIARALIKKGRNQY-LKLGDKEVEFNPKFRLYLHTKLSNPHYPPEV 185
BLAST of mRNA_M-pyrifera_M_contig72596.17250.1 vs. uniprot
Match: B5YNU5_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNU5_THAPS) HSP 1 Score: 155 bits (393), Expect = 1.070e-41 Identity = 77/118 (65.25%), Postives = 95/118 (80.51%), Query Frame = 1 Query: 1 IVRNSARWPLMIDPQLQGIKWVTKMES--EAGLATVRLGQKDMLRRLEHAISNGEPVLIENMGESIEAVLNPVIARATTKRGVGRLTLQLGDKEIDYNPSFRLYLHTKLPNPHYPPEI 348 +V NS+RWPL+IDPQLQGIKW+ + ES E L VRLGQKD++R+LE A+ NG +LIEN+GE+I+AVL PVI RAT KRG +L ++LGDKE D++P FRLYL TKL NPHYPPEI Sbjct: 2189 LVTNSSRWPLIIDPQLQGIKWIKQKESAPERNLQIVRLGQKDLIRKLEIALENGYTILIENLGETIDAVLMPVIQRATVKRGT-KLFIKLGDKECDFHPDFRLYLQTKLSNPHYPPEI 2305
BLAST of mRNA_M-pyrifera_M_contig72596.17250.1 vs. uniprot
Match: A0A7S3XWP9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWP9_HETAK) HSP 1 Score: 155 bits (392), Expect = 1.450e-41 Identity = 77/118 (65.25%), Postives = 95/118 (80.51%), Query Frame = 1 Query: 1 IVRNSARWPLMIDPQLQGIKWVTKMES--EAGLATVRLGQKDMLRRLEHAISNGEPVLIENMGESIEAVLNPVIARATTKRGVGRLTLQLGDKEIDYNPSFRLYLHTKLPNPHYPPEI 348 IV+ S RWPLMIDPQLQGI W+ +ME E L VRLGQKD+LR+L+ A+ NG +LIEN+GESI+AVLNPVI RAT +RG + L+LGD E+++NP+FRL+LHTKL NPHYPPEI Sbjct: 1187 IVQASTRWPLMIDPQLQGIAWIRRMEETPERNLQIVRLGQKDILRKLQAALENGWSILIENLGESIDAVLNPVIQRATIRRGKKQY-LKLGDTEVEFNPNFRLFLHTKLSNPHYPPEI 1303
BLAST of mRNA_M-pyrifera_M_contig72596.17250.1 vs. uniprot
Match: A0A836CGE4_9STRA (Dynein heavy chain family dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGE4_9STRA) HSP 1 Score: 155 bits (391), Expect = 2.000e-41 Identity = 77/118 (65.25%), Postives = 93/118 (78.81%), Query Frame = 1 Query: 1 IVRNSARWPLMIDPQLQGIKWVTKMESEA--GLATVRLGQKDMLRRLEHAISNGEPVLIENMGESIEAVLNPVIARATTKRGVGRLTLQLGDKEIDYNPSFRLYLHTKLPNPHYPPEI 348 IV NSARWPL+IDPQLQGIKW+ ES A L VRLGQ DMLR+LE A+ NG +LIEN+GES+EAVLNPVI RA RG ++ L+LGD E++++P FRL+LHTKL NPHYPPE+ Sbjct: 2865 IVCNSARWPLIIDPQLQGIKWIKNRESGADRNLQVVRLGQPDMLRKLERALENGHSILIENLGESLEAVLNPVIQRAIIYRG-RKMFLKLGDTEVEFHPDFRLFLHTKLSNPHYPPEV 2981
BLAST of mRNA_M-pyrifera_M_contig72596.17250.1 vs. uniprot
Match: A0A7S2QUS9_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QUS9_9STRA) HSP 1 Score: 153 bits (386), Expect = 9.450e-41 Identity = 74/118 (62.71%), Postives = 94/118 (79.66%), Query Frame = 1 Query: 1 IVRNSARWPLMIDPQLQGIKWVTKMES--EAGLATVRLGQKDMLRRLEHAISNGEPVLIENMGESIEAVLNPVIARATTKRGVGRLTLQLGDKEIDYNPSFRLYLHTKLPNPHYPPEI 348 IV NS+RWPLMIDPQLQGI W+ ES + L VRLGQKD++R+LE A+ G ++IEN+GE++EAVLNPV+ RAT KRG + +++GDKE D++P+FRLYLHTKL NPHYPPEI Sbjct: 2988 IVCNSSRWPLMIDPQLQGIAWIRNKESGEDRDLQIVRLGQKDLIRKLERALDRGTVLMIENLGETLEAVLNPVVQRATIKRG-SKYFIKVGDKECDFHPNFRLYLHTKLGNPHYPPEI 3104
BLAST of mRNA_M-pyrifera_M_contig72596.17250.1 vs. uniprot
Match: A0A482RXR9_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXR9_9ARCH) HSP 1 Score: 152 bits (384), Expect = 1.740e-40 Identity = 77/118 (65.25%), Postives = 93/118 (78.81%), Query Frame = 1 Query: 1 IVRNSARWPLMIDPQLQGIKWVTKMES--EAGLATVRLGQKDMLRRLEHAISNGEPVLIENMGESIEAVLNPVIARATTKRGVGRLTLQLGDKEIDYNPSFRLYLHTKLPNPHYPPEI 348 IV NSARWPL+IDPQLQGIKW+ + ES E L VRLGQ D+LR+LE A+ NG +LIEN+GESI+AVLNPVI RA KRG + L+LGD E++++ F+LYLHTKL NPHYPPEI Sbjct: 1430 IVCNSARWPLIIDPQLQGIKWLRQKESPAERNLQVVRLGQNDLLRKLERALENGYTILIENIGESIDAVLNPVIQRAVIKRGKKQY-LKLGDTEVEFHKDFKLYLHTKLSNPHYPPEI 1546
BLAST of mRNA_M-pyrifera_M_contig72596.17250.1 vs. uniprot
Match: A0A7S2FVH1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FVH1_9STRA) HSP 1 Score: 146 bits (369), Expect = 6.030e-40 Identity = 73/118 (61.86%), Postives = 91/118 (77.12%), Query Frame = 1 Query: 1 IVRNSARWPLMIDPQLQGIKWVTKMES--EAGLATVRLGQKDMLRRLEHAISNGEPVLIENMGESIEAVLNPVIARATTKRGVGRLTLQLGDKEIDYNPSFRLYLHTKLPNPHYPPEI 348 IV ++ARWPL+IDPQLQGIKW+ ES E L VRLGQ D+LR+L A+ NG +LIEN+GE ++AVLNPVI RAT KRG L ++LGD E++ NP+FRL+LHTKL NP YPPE+ Sbjct: 178 IVCSTARWPLIIDPQLQGIKWIRTKESAPERNLEVVRLGQSDLLRKLTRALENGHSILIENLGEKLDAVLNPVIQRATIKRG-RVLYVKLGDSEVEMNPNFRLFLHTKLNNPDYPPEV 294
BLAST of mRNA_M-pyrifera_M_contig72596.17250.1 vs. uniprot
Match: A0A7S4HE51_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HE51_9EUKA) HSP 1 Score: 145 bits (366), Expect = 1.100e-39 Identity = 71/116 (61.21%), Postives = 86/116 (74.14%), Query Frame = 1 Query: 1 IVRNSARWPLMIDPQLQGIKWVTKMESEAGLATVRLGQKDMLRRLEHAISNGEPVLIENMGESIEAVLNPVIARATTKRGVGRLTLQLGDKEIDYNPSFRLYLHTKLPNPHYPPEI 348 IV N ARWPL+IDPQLQGI+W+ K E + GL RLGQK ++ +L I NG PV+IEN+ ++AVLNPVI R T KRG L ++LGDKE+DY+ FRLYL TKL NPHYPPEI Sbjct: 51 IVCNCARWPLLIDPQLQGIRWIKKHEEKRGLKVCRLGQKTLMGQLSQGIENGIPVIIENIQLIVDAVLNPVIGRQTIKRG-RNLVIKLGDKEVDYHKDFRLYLQTKLSNPHYPPEI 165
BLAST of mRNA_M-pyrifera_M_contig72596.17250.1 vs. uniprot
Match: D7FRX0_ECTSI (Dynein heavy chain family dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX0_ECTSI) HSP 1 Score: 150 bits (378), Expect = 1.130e-39 Identity = 73/118 (61.86%), Postives = 92/118 (77.97%), Query Frame = 1 Query: 1 IVRNSARWPLMIDPQLQGIKWVTKMES--EAGLATVRLGQKDMLRRLEHAISNGEPVLIENMGESIEAVLNPVIARATTKRGVGRLTLQLGDKEIDYNPSFRLYLHTKLPNPHYPPEI 348 IV NSARWPL+IDPQLQGIKW+ E+ E L VRLGQ DMLR+LE A+ NG +LIEN+GE++EAVL PVI RA RG ++ ++LGD E++++P FRL+LHTKL NPH+PPEI Sbjct: 2777 IVTNSARWPLIIDPQLQGIKWIRTKEASPERNLEVVRLGQPDMLRKLEKALENGHSILIENLGETLEAVLTPVIQRAVIYRG-RKMYIKLGDSEVEFHPDFRLFLHTKLSNPHFPPEI 2893 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72596.17250.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig72596.17250.1 >prot_M-pyrifera_M_contig72596.17250.1 ID=prot_M-pyrifera_M_contig72596.17250.1|Name=mRNA_M-pyrifera_M_contig72596.17250.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp MIDPQLQGIKWVTKMESEAGLATVRLGQKDMLRRLEHAISNGEPVLIENMback to top mRNA from alignment at M-pyrifera_M_contig72596:723..1070- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig72596.17250.1 ID=mRNA_M-pyrifera_M_contig72596.17250.1|Name=mRNA_M-pyrifera_M_contig72596.17250.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=348bp|location=Sequence derived from alignment at M-pyrifera_M_contig72596:723..1070- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig72596:723..1070- >mRNA_M-pyrifera_M_contig72596.17250.1 ID=mRNA_M-pyrifera_M_contig72596.17250.1|Name=mRNA_M-pyrifera_M_contig72596.17250.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig72596:723..1070- (Macrocystis pyrifera P11B4 male)back to top |