mRNA_M-pyrifera_M_contig72507.17236.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig72507.17236.1 vs. uniprot
Match: A0A0D2URE5_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2URE5_CAPO3) HSP 1 Score: 124 bits (311), Expect = 1.100e-28 Identity = 81/255 (31.76%), Postives = 136/255 (53.33%), Query Frame = 1 Query: 1 FIIRYPVEMSKIKSASSITLEEESPVVVMISNVSNRAVGVASTSGRVL--RLRVEVDTSAALVRSSTHGLASASASNKYK-----EARKVTRDDLILRDENGTVVAAGQDFTKDVRLLGGGEDVFVRCTVAFRD-SVPAYSVARLQFSLELGSIDTPSSLVPVQIRTVSVQLAESYQHEDAN-VLLVANNKTTADEIAAWKEVAATYGLRLAVFNLSLYGGFSMRHPWSSGSSRCLLDDFANDGLVIFLNNTCRD 738 F +R+P+E+S + A +I E+P+ + + N+S + +G+ S + R++ LR+ V L L + Y + D++LRD+NG + FT+++ L G+ ++ TVAF + P Y+ +Q +L G + L + R S+QL E+Y D+N +LLV NN + A+E+ AW +A TYG+RLA +N+SLY G ++RH SG+S L DF+ +++ LNN C + Sbjct: 428 FRVRFPLELSAVVGAEAIIPGAEAPIALRVKNISLKPMGLNSETRRLILAHLRLLVTKDVFLTADGVLVLTNPPNPEDYALSGLPDTLPFPEGDIVLRDKNGNRMTLLGGFTQEIAELMPGQVCYIAGTVAFGNPDTPMYTKVHMQATLGEGRLLAADQLQLIHQRPWSIQLCEAYNRSDSNDILLVVNNLSKAEEVTAWDNIARTYGIRLAKWNISLYTGLTLRHVKMSGTS--LEQDFSGKTIIV-LNNPCME 679
BLAST of mRNA_M-pyrifera_M_contig72507.17236.1 vs. uniprot
Match: A0A7W1A189_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W1A189_9DELT) HSP 1 Score: 115 bits (288), Expect = 1.190e-25 Identity = 76/241 (31.54%), Postives = 119/241 (49.38%), Query Frame = 1 Query: 1 FIIRYPVEMSKIKSASSITLEEESPVVVMISNVSNRAVGVASTSGRVLRLRVEVDTSAALVRSSTHGLASASASNKYKEARKVTRDDLILRDENGTVVAAGQDFTKDVRLLGGGEDVFVRCTVAFRDSVPAYSVARLQFSLELGSIDTPSSLVPVQIRTVSVQLAESYQHEDANVLLVANNKTTADEIAAWKEVAATYGLRLAVFNLSLYGGFSMRHPWSSGSSRCLLDDFANDGLVIFLN 723 F+IRYPV +S I++ S+ E S V ++N S A+G S RV+R++V + L D+ +L +G + G +T ++ +G G+ V TV +D P Y +LELG ID P+S+ P+QIR V++A +Q DA+VLLV N++TT +EI AW ++ + A+++LS + P + G + L D FAN +VI N Sbjct: 423 FVIRYPVRISAIENLKSLAAGEASRVRFSVTNQSRFALGATSECKRVVRIKVATAPDSEL------------------------GDEHVLLIVDGRELLPGTGWTHELPAIGAGDTTQVELTVKVKDGAPEYLRFAAHVTLELGDIDAPASVRPIQIRLFDVRVARPFQVSDADVLLVVNHRTTREEIEAWDQLGDRLAFKSAIWDLSRERHLDLERPLNGGVA--LADWFANKAVVILDN 637
BLAST of mRNA_M-pyrifera_M_contig72507.17236.1 vs. uniprot
Match: A0A1M3NHH2_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium 68-20 TaxID=1895795 RepID=A0A1M3NHH2_9DELT) HSP 1 Score: 97.1 bits (240), Expect = 2.810e-19 Identity = 68/241 (28.22%), Postives = 118/241 (48.96%), Query Frame = 1 Query: 4 IIRYPVEMSKIKSASSITLEEESPVVVMISNVSNRAVGVASTSGRVLRLRVEVDTSAALVRSSTHGLASASASNKYKEARKVTRDDLILRDENGTVVAAGQDFTKDVRLLGGGEDVFVRCTVAFRDSVPAYSVARLQFSLELGSIDTPSSLVPVQIRTVSVQLAESYQHEDANVLLVANNKTTADEIAAWKEVAATYGLRLAVFNLSLYGGFSMRHPWSSGSSRCLLDDFANDGLVIFLNN 726 +IR+P+E+S+ + S+ + + + ++NVS + G+AS GR + +R+ +D + H LA +S K+ V+ DV +G GED+ T+A Y+ AR S ELG I P V ++ + + + + A+VLLV NN+T ADE+AAW+E+ + GL ++V++ +L GG ++ ++G+ D+ LV+ LNN Sbjct: 424 VIRFPIEVSEPTALFSLAPGQATRIRWQLTNVSGKPFGLASEQGRAVGVRLVLD-GGEIGADRIHLLAPSSPEEKH--------------------VSLEHGLDLDVPRVGAGEDISFEATIAVPSDAAPYTSARFVVSAELGHIAEPRRARAVHLQEIRISVGRPFDARGADVLLVVNNRTMADEVAAWEELVRSSGLTVSVWDAALEGGLAVLRNVAAGAH-----DYR---LVVVLNN 635
BLAST of mRNA_M-pyrifera_M_contig72507.17236.1 vs. uniprot
Match: A0A2P6NZH9_9EUKA (PH domain-containing protein (Fragment) n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NZH9_9EUKA) HSP 1 Score: 96.7 bits (239), Expect = 3.950e-19 Identity = 72/246 (29.27%), Postives = 119/246 (48.37%), Query Frame = 1 Query: 1 FIIRYPVEMSKIKSASSITLEEESPVVVMISNVSNRAVGVASTSG--RVLRLRVEVDTSAALVRSSTHGLASASASNKYKEARKVTRDDLILRDENG-TVVAAGQDFTKDVRLLGGGEDVFVRCTVAF-RDSVPAYSVARLQFSLELGSIDTPSSLVPVQIRTVSVQLAESYQHEDANVLLVANNKTTADEIAAWKEVAATYGLRLAVFNLSLYGGFSMRHPWSSGSSRCLLDDFANDGLVIFLNN 726 F I+Y S A+SI+ +EESP+V N+S +G+ G R++ +E+D N K+ D+ LRD G T V D+ LL + ++ T+ F D + Y+ + SL LG + + VQIR +QLAE Y +++ LLV NN+T +E+AAW+++ G +++V+N++LYG ++ H G L+D++ +I+LNN Sbjct: 328 FTIQYAAHNSLFFGATSISRKEESPLVFASINISALDLGLNPRYGPSRIVYTTMEIDL------------------NTKGGTLKIDPSDVRLRDHRGNTFVDPKLGLRADLPLLPSNDQLYFSSTMQFVNDKIKPYTRLTVHSSLFLGHVLDMQRPIKVQIRPFEIQLAEEYDSCNSDFLLVVNNRTEYNEVAAWEKIIGAIGAKVSVWNVNLYGDLALTHLRKDGQR--LIDEYRFKN-IIYLNN 552
BLAST of mRNA_M-pyrifera_M_contig72507.17236.1 vs. uniprot
Match: A0A7C5J1S3_9DELT (Uncharacterized protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7C5J1S3_9DELT) HSP 1 Score: 94.4 bits (233), Expect = 2.270e-18 Identity = 63/243 (25.93%), Postives = 117/243 (48.15%), Query Frame = 1 Query: 1 FIIRYPVEMSKIKSASSITLEEESPVVVMISNVSNRAVGVASTSGRVLRLRVEVDTSAALVRSSTHGLASASASNKYKEARKVTRDDLILRDENGTVVAAGQDFTKDVRLLGGGEDVFVRCTVAFRDSVPAYSVARLQFSLELGSIDTPSSLVPVQIRTVSVQLAESYQHEDA-NVLLVANNKTTADEIAAWKEVAATYGLRLAVFNLSLYGGFSMRHPWSSGSSRCLLDDFANDGLVIFLNN 726 F+I +P+E + + S ++ E + + ++N +G+A+ R +R + A+ ++ +A +L D +G V +T ++ + G+ + F P Y L ++E+G ++ P+ L PVQ R ++A Y+ + A +VL+V N++TT DE+ AW+ + GL++A+++LSL GG + P S G S LLD F +++ LNN Sbjct: 235 FVIAFPIEATPLDSLRALAPGEAAHLRFALTNTGKLPLGIATEGARRVRFTL------------------AAHHSELGDAHA------MLLDGDGRRVPLEDGWTVELDAIEPGQTQRFEACIGFTRDAPLYRSLTLWLTVEVGYLERPAELRPVQFRAFEARVASRYRRDPAADVLVVVNHRTTRDELDAWRSLLEELGLKMAIWDLSLQGGIDLEEPLSDGES--LLDHFGGASMIV-LNN 450
BLAST of mRNA_M-pyrifera_M_contig72507.17236.1 vs. uniprot
Match: A0A0D2VQA3_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VQA3_CAPO3) HSP 1 Score: 93.6 bits (231), Expect = 4.660e-18 Identity = 63/162 (38.89%), Postives = 89/162 (54.94%), Query Frame = 1 Query: 256 DDLILRDENGTVVAAGQDFTKDVRLLGGGEDVFVRCTVAFRDS-VPAYSVARLQFSLELGSIDTPSSLVPVQIRTVSVQLAESYQHE-DANVLLVANNKTTADEIAAWKEVAATYGLRLAVFNLSLYGGFSMRHPWSSGSSRCLLDDFANDGLVIFLNNTCR 735 + +I RD+NG + + T + L G + T AF + VP Y+ A LQ SL LG + P+ L +Q R VQL E+Y+ A+VLLV N+ TT DEIAAW+ VA GL + +N+S YGG S+R G+S L D + +++ LNN R Sbjct: 727 EQVIFRDKNGFPLDLQEGLTAMLETLPAGSSRILSGTFAFASNEVPLYTHAVLQASLALGKLRDPAQLQLIQQRLHLVQLCETYERNWSADVLLVLNSLTTTDEIAAWERVARRLGLVVNRWNVSFYGGLSLRDLKPDGTS--LARDLKHKSIIL-LNNAFR 885
BLAST of mRNA_M-pyrifera_M_contig72507.17236.1 vs. uniprot
Match: A0A0K1Q239_9DELT (PE_PGRS n=2 Tax=Labilithrix luteola TaxID=1391654 RepID=A0A0K1Q239_9DELT) HSP 1 Score: 93.2 bits (230), Expect = 5.750e-18 Identity = 64/237 (27.00%), Postives = 113/237 (47.68%), Query Frame = 1 Query: 7 IRYPVEMSKIKSASSITLEEESPVVVMISNVSNRAVGVASTSGRVLRLRVEVDTSAALVRSSTHGLASASASNKYKEARKVTRDDLILRDENGTVVAAGQDFTKDVRLLGGGEDVFVRCTVAFRDSVPAYSVARLQFSLELGSIDTPSSLVPVQIRTVSVQLAESYQHEDANVLLVANNKTTADEIAAWKEVAATYGLRLAVFNLSLYGGFSMRHPWSSGSSR----CLLDDFANDG 705 +R+P+E++ + S S+ E + + + NVS RAVG + R + + + + + + + L DE GT V + F + V + TVA + P ++ ARL +++LG D P+ L P+Q + V++ E+ + A+VL+VANN++ EI AW+EV A++GL AVF++S G + ++G + LLD+ + G Sbjct: 287 VRFPLEITPLTSLFSLAPGEAARLQWNVMNVSERAVGFETDEPRAVSVNIVM------------------------AGGDLQPNQIHLFDERGTHVPLDRGFARSVARIDAKHGNPFELTVAVSEDAPPHASARLVLAVQLGHFDAPNKLRPIQFQEFVVRVGEATEARQADVLVVANNRSDKTEIEAWREVIASFGLSSAVFDVSHVGNLEILRDVANGERKFRMVVLLDNSMDTG 499 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72507.17236.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig72507.17236.1 >prot_M-pyrifera_M_contig72507.17236.1 ID=prot_M-pyrifera_M_contig72507.17236.1|Name=mRNA_M-pyrifera_M_contig72507.17236.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=238bp MSKIKSASSITLEEESPVVVMISNVSNRAVGVASTSGRVLRLRVEVDTSAback to top mRNA from alignment at M-pyrifera_M_contig72507:1..738+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig72507.17236.1 ID=mRNA_M-pyrifera_M_contig72507.17236.1|Name=mRNA_M-pyrifera_M_contig72507.17236.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig72507:1..738+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig72507:1..738+ >mRNA_M-pyrifera_M_contig72507.17236.1 ID=mRNA_M-pyrifera_M_contig72507.17236.1|Name=mRNA_M-pyrifera_M_contig72507.17236.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1428bp|location=Sequence derived from alignment at M-pyrifera_M_contig72507:1..738+ (Macrocystis pyrifera P11B4 male)back to top |