mRNA_M-pyrifera_M_contig72446.17225.1 (mRNA) Macrocystis pyrifera P11B4 male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig72446.17225.1 vs. uniprot
Match: A0A7S3MZ28_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3MZ28_9SPIT) HSP 1 Score: 386 bits (992), Expect = 8.570e-130 Identity = 174/266 (65.41%), Postives = 216/266 (81.20%), Query Frame = 1 Query: 1 YMPHAVMKLLENMPMPWEQARDVRALYHVTGAITFVDETPRVIEPVYAAQWGTMWMMMRREKRMRRHFKRMRFPPFDDEEPPLDFADNILDVEPPPPIHMELDPELDQSVADWFYDHMPLRHSRMVNGPSYKRWRLPVEVLATLHRLASPMLSDVKDPNHFFLFDKEYFFTSKALNVAIPGGPKFEPLFPDDADDDEDWNEFNDIRKVIHRRPIRTEYKVHFPHLYNSRPRKVALAPYRKPASCLVRSTDPTQPPFVFHPGLKPIS 798 Y+PHA+ KL+ENMPMPWEQ R+V+ LYH+TGAITFV+ETP+VIEP+Y AQWG+MW+MMRREKR R+HFKRM+FPPFDDEEPPLD+ DN+L+VEP I MELD E D + DWFYDHMPL+H++MVNGPSY+ W+LP++ LA LHR+A +L+D D N +LFDK+ F+T+KALN+AIPGGPKFEPL+ D D++EDWNEFNDI KVI R PI+TEYK+ FPHLYNSRPR V+ Y +PA V++ DP P F F L PI+ Sbjct: 35 YVPHAIFKLMENMPMPWEQVRNVKVLYHITGAITFVNETPKVIEPIYRAQWGSMWIMMRREKRDRKHFKRMKFPPFDDEEPPLDYGDNVLNVEPLEAIQMELDEEDDDQIFDWFYDHMPLQHTKMVNGPSYRFWKLPLKTLANLHRVAGQLLNDYNDSNFTYLFDKKSFYTAKALNMAIPGGPKFEPLYRDAYDEEEDWNEFNDINKVIIRTPIKTEYKIAFPHLYNSRPRSVSTVTYHEPAVAFVKNEDPDVPTFAFDQSLNPIA 300
BLAST of mRNA_M-pyrifera_M_contig72446.17225.1 vs. uniprot
Match: A0A7S2STK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STK9_9STRA) HSP 1 Score: 375 bits (963), Expect = 3.490e-129 Identity = 177/241 (73.44%), Postives = 205/241 (85.06%), Query Frame = 1 Query: 1 YMPHAVMKLLENMPMPWEQARDVRALYHVTGAITFVDETPRVIEPVYAAQWGTMWMMMRREKRMRRHFKRMRFPPFDDEEPPLDFADNILDVEPPPPIHMELDPELDQSVADWFYDHMPLRHSRMVNGPSYKRWRLPVEVLATLHRLASPMLSDVKDPNHFFLFDKEYFFTSKALNVAIPGGPKFEPLFPDDADDDEDWNEFNDIRKVIHRRPIRTEYKVHFPHLYNSRPRKVALAPYRKP 723 Y+PHAV KLLENMPMPWEQ R+V+ LYH+TGAI+FV+E P VIEPVYAAQWGTMW+MMRREKR RRHFKRMRFPPFDDEEPPLD+ DNILDVEP I+MELDPE D++V DWFYDH PL++S+ VNGPSY+RWRL V +++TL+RLA + SD+ D N+F LF+K+ FFT+KALN+AIPGGPKFEPLF D D+EDWNEFNDI K+I R IRTEYKV FP LYNSRPRKV LAPY P Sbjct: 15 YVPHAVYKLLENMPMPWEQVRNVKVLYHITGAISFVNEIPWVIEPVYAAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYGDNILDVEPLEAINMELDPEDDEAVYDWFYDHKPLQYSKHVNGPSYRRWRLNVPIMSTLYRLAGQLQSDLLDRNYFHLFEKKSFFTAKALNMAIPGGPKFEPLFRDMGADEEDWNEFNDINKIIIRHQIRTEYKVQFPFLYNSRPRKVRLAPYHNP 255
BLAST of mRNA_M-pyrifera_M_contig72446.17225.1 vs. uniprot
Match: A0A392MIJ2_9FABA (Pre-mRNA-processing-splicing factor 8-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392MIJ2_9FABA) HSP 1 Score: 377 bits (968), Expect = 2.230e-128 Identity = 172/266 (64.66%), Postives = 212/266 (79.70%), Query Frame = 1 Query: 1 YMPHAVMKLLENMPMPWEQARDVRALYHVTGAITFVDETPRVIEPVYAAQWGTMWMMMRREKRMRRHFKRMRFPPFDDEEPPLDFADNILDVEPPPPIHMELDPELDQSVADWFYDHMPLRHSRMVNGPSYKRWRLPVEVLATLHRLASPMLSDVKDPNHFFLFDKEYFFTSKALNVAIPGGPKFEPLFPDDADDDEDWNEFNDIRKVIHRRPIRTEYKVHFPHLYNSRPRKVALAPYRKPASCLVRSTDPTQPPFVFHPGLKPIS 798 ++PHAV KLLENMPMPWEQ RDVR LYH++GAITFV+E P V+EP+Y AQWGTMW+MMRREKR RRHFKRMRFPPFDDEEPPLD+ADN+LDV+P PI +ELD E D +V WFYDH PL ++++NGPSY++W L + ++ATLHRLA +LSD+ D N+F+LFD E FFT+KALN+ IPGGPKFEPL+ D DEDWNEFNDI K+I R P+RTEY++ FPHLYN+RPRKV L Y P +++ DP P F + P + PI+ Sbjct: 19 FIPHAVYKLLENMPMPWEQVRDVRVLYHISGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEPIQLELDEEEDSAVYTWFYDHKPLVKTKLINGPSYRKWHLSLPIMATLHRLAGQLLSDLSDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVRLCIYHTPMVMYIKTEDPDLPAFYYDPLIHPIT 284
BLAST of mRNA_M-pyrifera_M_contig72446.17225.1 vs. uniprot
Match: A0A7S3BM02_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BM02_9VIRI) HSP 1 Score: 375 bits (964), Expect = 6.890e-128 Identity = 179/266 (67.29%), Postives = 211/266 (79.32%), Query Frame = 1 Query: 1 YMPHAVMKLLENMPMPWEQARDVRALYHVTGAITFVDETPRVIEPVYAAQWGTMWMMMRREKRMRRHFKRMRFPPFDDEEPPLDFADNILDVEPPPPIHMELDPELDQSVADWFYDHMPLRHSRMVNGPSYKRWRLPVEVLATLHRLASPMLSDVKDPNHFFLFDKEYFFTSKALNVAIPGGPKFEPLFPDDADDDEDWNEFNDIRKVIHRRPIRTEYKVHFPHLYNSRPRKVALAPYRKPASCLVRSTDPTQPPFVFHPGLKPIS 798 ++PHAV KLLE+MPMPWEQ RDV LYHVTGAI+FV+ETPRVIEPVY AQW W+M RREKR RRHFKRMRFPPFDDEEPPLD+ DN+LDVEP I +ELDPE D VA WFYDH L++++MVNGPSYK W L + V+ATL+RLA +LSD+ D N+F+LF+KE FFT+KALN+AIPGGPKFEPLF D D+DWNEFNDI K+I R PIRTEY+V FP+LY+SRPRKV L PY P +++ DP P F F P + PIS Sbjct: 70 FVPHAVFKLLESMPMPWEQVRDVPVLYHVTGAISFVNETPRVIEPVYIAQWSATWIMQRREKRDRRHFKRMRFPPFDDEEPPLDYTDNLLDVEPLEAIQLELDPEEDAPVARWFYDHKALQYTKMVNGPSYKSWTLGLPVMATLYRLAGQLLSDLTDDNYFYLFNKEAFFTAKALNLAIPGGPKFEPLFRDADTYDDDWNEFNDINKLIIRSPIRTEYRVAFPYLYHSRPRKVRLGPYHSPMVMYIKAEDPDLPAFYFDPLIHPIS 335
BLAST of mRNA_M-pyrifera_M_contig72446.17225.1 vs. uniprot
Match: A0A2P4YJN0_9STRA (Pre-mRNA-processing-splicing factor 8 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJN0_9STRA) HSP 1 Score: 387 bits (995), Expect = 5.070e-127 Identity = 181/266 (68.05%), Postives = 213/266 (80.08%), Query Frame = 1 Query: 1 YMPHAVMKLLENMPMPWEQARDVRALYHVTGAITFVDETPRVIEPVYAAQWGTMWMMMRREKRMRRHFKRMRFPPFDDEEPPLDFADNILDVEPPPPIHMELDPELDQSVADWFYDHMPLRHSRMVNGPSYKRWRLPVEVLATLHRLASPMLSDVKDPNHFFLFDKEYFFTSKALNVAIPGGPKFEPLFPDDADDDEDWNEFNDIRKVIHRRPIRTEYKVHFPHLYNSRPRKVALAPYRKPASCLVRSTDPTQPPFVFHPGLKPIS 798 Y+PHA+ KLLENMPMPWEQ +DV+ LYH+TGAITFV+E P VIEPVY AQWGTMW+MMRREKR RRHFKRMRFPPFDDEEPPLD+ DNILD+EP I MELD E D++V +W YD PL S+ VNGPSY++WRLPV ++A LHRLA ++SD+ DPN+ +LFDK+ FFT+KALNVAIPGGPKFEPL+ D +DDEDWNEFNDI K+I R IRTEYKV FP LYNSRPR V + PY P C +++ DP P F F P + PIS Sbjct: 105 YVPHAIFKLLENMPMPWEQVKDVKVLYHITGAITFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYGDNILDIEPSESITMELDEEDDEAVIEWLYDSKPLVDSKFVNGPSYRKWRLPVPIMANLHRLAGQLMSDLIDPNYEYLFDKKSFFTAKALNVAIPGGPKFEPLYRDLDEDDEDWNEFNDINKIIIRHQIRTEYKVAFPFLYNSRPRSVHIQPYHTPVLCYIKAEDPDLPAFYFDPIVNPIS 370
BLAST of mRNA_M-pyrifera_M_contig72446.17225.1 vs. uniprot
Match: A0A6J0M083_RAPSA (pre-mRNA-processing-splicing factor 8A-like n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0M083_RAPSA) HSP 1 Score: 377 bits (968), Expect = 5.680e-127 Identity = 173/266 (65.04%), Postives = 211/266 (79.32%), Query Frame = 1 Query: 1 YMPHAVMKLLENMPMPWEQARDVRALYHVTGAITFVDETPRVIEPVYAAQWGTMWMMMRREKRMRRHFKRMRFPPFDDEEPPLDFADNILDVEPPPPIHMELDPELDQSVADWFYDHMPLRHSRMVNGPSYKRWRLPVEVLATLHRLASPMLSDVKDPNHFFLFDKEYFFTSKALNVAIPGGPKFEPLFPDDADDDEDWNEFNDIRKVIHRRPIRTEYKVHFPHLYNSRPRKVALAPYRKPASCLVRSTDPTQPPFVFHPGLKPIS 798 ++PHAV KLLENMPMPWEQ RDV+ LYH+TGAITFV+E P V+EP+Y AQWGTMW+MMRREKR RRHFKRMRFPPFDDEEPPLD+ADN+LDV+P PI +ELD E D +V WFYDH PL ++++NGPSY++W L + ++ATLHRLA +LSD+ D N+F+LFD FFT+KALN+ IPGGPKFEPL+ D DEDWNEFNDI K+I R P+RTEY++ FPHLYN+RPRKV L Y P +++ DP P F + P L PIS Sbjct: 117 FVPHAVFKLLENMPMPWEQVRDVKVLYHITGAITFVNEIPWVVEPIYMAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEPIQLELDEEEDSAVHTWFYDHKPLVKTKLINGPSYRKWNLSLPIMATLHRLAGQLLSDLIDRNYFYLFDMPSFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKLCVYHSPMVMYIKTEDPDLPAFYYDPLLHPIS 382
BLAST of mRNA_M-pyrifera_M_contig72446.17225.1 vs. uniprot
Match: A0A2K3LA19_TRIPR (Pre-mRNA-processing-splicing factor 8-like protein n=3 Tax=fabids TaxID=91835 RepID=A0A2K3LA19_TRIPR) HSP 1 Score: 377 bits (968), Expect = 6.260e-127 Identity = 172/266 (64.66%), Postives = 212/266 (79.70%), Query Frame = 1 Query: 1 YMPHAVMKLLENMPMPWEQARDVRALYHVTGAITFVDETPRVIEPVYAAQWGTMWMMMRREKRMRRHFKRMRFPPFDDEEPPLDFADNILDVEPPPPIHMELDPELDQSVADWFYDHMPLRHSRMVNGPSYKRWRLPVEVLATLHRLASPMLSDVKDPNHFFLFDKEYFFTSKALNVAIPGGPKFEPLFPDDADDDEDWNEFNDIRKVIHRRPIRTEYKVHFPHLYNSRPRKVALAPYRKPASCLVRSTDPTQPPFVFHPGLKPIS 798 ++PHAV KLLENMPMPWEQ RDVR LYH++GAITFV+E P V+EP+Y AQWGTMW+MMRREKR RRHFKRMRFPPFDDEEPPLD+ADN+LDV+P PI +ELD E D +V WFYDH PL ++++NGPSY++W L + ++ATLHRLA +LSD+ D N+F+LFD E FFT+KALN+ IPGGPKFEPL+ D DEDWNEFNDI K+I R P+RTEY++ FPHLYN+RPRKV L Y P +++ DP P F + P + PI+ Sbjct: 119 FIPHAVYKLLENMPMPWEQVRDVRVLYHISGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEPIQLELDEEEDSAVYTWFYDHKPLVKTKLINGPSYRKWHLSLPIMATLHRLAGQLLSDLSDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVRLCIYHTPMVMYIKTEDPDLPAFYYDPLIHPIT 384
BLAST of mRNA_M-pyrifera_M_contig72446.17225.1 vs. uniprot
Match: A0A816JWT1_BRANA ((rape) hypothetical protein n=2 Tax=malvids TaxID=91836 RepID=A0A816JWT1_BRANA) HSP 1 Score: 377 bits (968), Expect = 3.830e-125 Identity = 173/266 (65.04%), Postives = 211/266 (79.32%), Query Frame = 1 Query: 1 YMPHAVMKLLENMPMPWEQARDVRALYHVTGAITFVDETPRVIEPVYAAQWGTMWMMMRREKRMRRHFKRMRFPPFDDEEPPLDFADNILDVEPPPPIHMELDPELDQSVADWFYDHMPLRHSRMVNGPSYKRWRLPVEVLATLHRLASPMLSDVKDPNHFFLFDKEYFFTSKALNVAIPGGPKFEPLFPDDADDDEDWNEFNDIRKVIHRRPIRTEYKVHFPHLYNSRPRKVALAPYRKPASCLVRSTDPTQPPFVFHPGLKPIS 798 ++PHAV KLLENMPMPWEQ RDV+ LYH+TGAITFV+E P V+EP+Y AQWGTMW+MMRREKR RRHFKRMRFPPFDDEEPPLD+ADN+LDV+P PI +ELD E D +V WFYDH PL ++++NGPSY++W L + ++ATLHRLA +LSD+ D N+F+LFD FFT+KALN+ IPGGPKFEPL+ D DEDWNEFNDI K+I R P+RTEY++ FPHLYN+RPRKV L Y P +++ DP P F + P L PIS Sbjct: 115 FVPHAVFKLLENMPMPWEQVRDVKVLYHITGAITFVNEIPWVVEPIYMAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEPIQLELDEEEDSAVHTWFYDHKPLVKTKLINGPSYRKWNLSLPIMATLHRLAGQLLSDLIDRNYFYLFDMPSFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKLCVYHSPMVMYIKTEDPDLPAFYYDPLLHPIS 380
BLAST of mRNA_M-pyrifera_M_contig72446.17225.1 vs. uniprot
Match: A0A699YYP8_HAELA (MPN domain-containing protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YYP8_HAELA) HSP 1 Score: 369 bits (947), Expect = 3.950e-125 Identity = 171/265 (64.53%), Postives = 210/265 (79.25%), Query Frame = 1 Query: 1 YMPHAVMKLLENMPMPWEQARDVRALYHVTGAITFVDETPRVIEPVYAAQWGTMWMMMRREKRMRRHFKRMRFPPFDDEEPPLDFADNILDVEPPPPIHMELDPELDQSVADWFYDHMPLRHSRMVNGPSYKRWRLPVEVLATLHRLASPMLSDVKDPNHFFLFDKEYFFTSKALNVAIPGGPKFEPLFPDDADDDEDWNEFNDIRKVIHRRPIRTEYKVHFPHLYNSRPRKVALAPYRKPASCLVRSTDPTQPPFVFHPGLKPI 795 ++PHAV KLLENMPMPWEQ R V+ +YH+TGAITFV+E P VIEPVY AQWGTMW+MMRREKR RRHFKRMRFPPFDDEEPPLD+ADNILDV+P I +ELD E D +V WF+DH PLR+S VNGPSYKRW+LP+ ++ L+RLA +LSD D N+F+LF+++ F T+K+LN+ IPGGPKFEPLF D D+DWNEFNDI K+I R PIRTEYKV FP+LYN+RPRKV L+ Y P + +++ DP P + + P + PI Sbjct: 55 FVPHAVYKLLENMPMPWEQVRHVKVIYHITGAITFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVDPLEAIELELDEEEDSAVHQWFFDHQPLRYSNFVNGPSYKRWKLPLPIMGALYRLAGQLLSDFGDKNYFYLFEEQAFITAKSLNMCIPGGPKFEPLFRDMDTRDDDWNEFNDINKLIIRSPIRTEYKVAFPYLYNNRPRKVRLSVYHYPLTMYIKTEDPDLPAYYYDPLIHPI 319
BLAST of mRNA_M-pyrifera_M_contig72446.17225.1 vs. uniprot
Match: A0A8D7AVQ7_MUSAM ((wild Malaysian banana) hypothetical protein (Fragment) n=2 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A8D7AVQ7_MUSAM) HSP 1 Score: 375 bits (964), Expect = 3.080e-124 Identity = 174/266 (65.41%), Postives = 211/266 (79.32%), Query Frame = 1 Query: 1 YMPHAVMKLLENMPMPWEQARDVRALYHVTGAITFVDETPRVIEPVYAAQWGTMWMMMRREKRMRRHFKRMRFPPFDDEEPPLDFADNILDVEPPPPIHMELDPELDQSVADWFYDHMPLRHSRMVNGPSYKRWRLPVEVLATLHRLASPMLSDVKDPNHFFLFDKEYFFTSKALNVAIPGGPKFEPLFPDDADDDEDWNEFNDIRKVIHRRPIRTEYKVHFPHLYNSRPRKVALAPYRKPASCLVRSTDPTQPPFVFHPGLKPIS 798 ++PHAV KLLENMPMPWEQ R+V+ LYH TGAITFV+E P V EP+Y AQWGTMW+MMRREKR RRHFKRMRFPPFDDEEPPLD+ADN+LDVEP I +ELD E D +V WFYDH PL ++++NGPSY+RW L + ++A LHRLA +LSD+ D N+F+LFD E FFT+KALN+ IPGGPKFEPL+ D DEDWNEFNDI K+I R+P+RTEY++ FPHLYN+RPRKV L+PY P +++ DP P F F P + PIS Sbjct: 112 FVPHAVYKLLENMPMPWEQVRNVKVLYHTTGAITFVNEIPWVAEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVEPLEAIQIELDDEEDAAVYSWFYDHKPLVKTKLINGPSYRRWYLSLPIMANLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDTEKGDEDWNEFNDINKLIIRQPLRTEYRIAFPHLYNNRPRKVKLSPYHGPMIMYIKAEDPDLPVFYFDPLINPIS 377 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72446.17225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig72446.17225.1 >prot_M-pyrifera_M_contig72446.17225.1 ID=prot_M-pyrifera_M_contig72446.17225.1|Name=mRNA_M-pyrifera_M_contig72446.17225.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=265bp MPHAVMKLLENMPMPWEQARDVRALYHVTGAITFVDETPRVIEPVYAAQWback to top mRNA from alignment at M-pyrifera_M_contig72446:3..800+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig72446.17225.1 ID=mRNA_M-pyrifera_M_contig72446.17225.1|Name=mRNA_M-pyrifera_M_contig72446.17225.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig72446:3..800+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig72446:3..800+ >mRNA_M-pyrifera_M_contig72446.17225.1 ID=mRNA_M-pyrifera_M_contig72446.17225.1|Name=mRNA_M-pyrifera_M_contig72446.17225.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1590bp|location=Sequence derived from alignment at M-pyrifera_M_contig72446:3..800+ (Macrocystis pyrifera P11B4 male)back to top |