mRNA_M-pyrifera_M_contig72432.17221.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig72432.17221.1 vs. uniprot
Match: A0A355SSZ5_9GAMM (Uncharacterized protein (Fragment) n=7 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A355SSZ5_9GAMM) HSP 1 Score: 508 bits (1308), Expect = 2.060e-169 Identity = 269/290 (92.76%), Postives = 274/290 (94.48%), Query Frame = 1 Query: 61 VQSLALRLVALLLVLSRQAVRFLSTLALCLAVFCPVAVNAAVSDQLTLTAEEEAWRQAHPVLRVGSEVDWAPYNFHEDGEPLGFSVDIMRLVAQRLDVELEFVGPEHWPELEDRLLNGSVDVLLNTVRTPAREQSMLFSPPYGAAPVGIASRLNAPVTSLTLGSSLRVAVPRGFFTERLLPERHPDIELVIAEGTVASLMAVALGEADATVGAYPALRHQIRANLLGQLAITGDYRLPDPDLTRLRFAVRKDQVILDELLRKALDTVSRHERAEILGRWLSADQELRPST 930 +Q LALR ALLLVLSRQAVR LS LALC A C VAV+AAVSDQLTLTAEEEAWRQAHPVLRVGSEVDWAPYNF+EDGE LGFSVDIMRLVAQRL VELEFVGPEHWPELEDRLLNGSVDVLLNTVRTPAREQSMLFSPPYGAAPVGIASRLNAPVTSLTL SSLRVAVPRGFFTERLLPE HPDIELVIAEGTVASLMAVALGEADATVGAYPALRHQIRANLLGQLAITGDYRLPD DLTRLRFAVRKDQVILD+LLRKALDTVSRHERAEILGRWL+ DQEL PST Sbjct: 1 MQRLALRFAALLLVLSRQAVRILSPLALCFAGCCSVAVSAAVSDQLTLTAEEEAWRQAHPVLRVGSEVDWAPYNFYEDGETLGFSVDIMRLVAQRLGVELEFVGPEHWPELEDRLLNGSVDVLLNTVRTPAREQSMLFSPPYGAAPVGIASRLNAPVTSLTLESSLRVAVPRGFFTERLLPELHPDIELVIAEGTVASLMAVALGEADATVGAYPALRHQIRANLLGQLAITGDYRLPDADLTRLRFAVRKDQVILDQLLRKALDTVSRHERAEILGRWLAVDQELSPST 290
BLAST of mRNA_M-pyrifera_M_contig72432.17221.1 vs. uniprot
Match: A0A2D4TBN7_9GAMM (Uncharacterized protein (Fragment) n=2 Tax=Haliea TaxID=475794 RepID=A0A2D4TBN7_9GAMM) HSP 1 Score: 514 bits (1323), Expect = 6.660e-168 Identity = 271/290 (93.45%), Postives = 276/290 (95.17%), Query Frame = 1 Query: 61 VQSLALRLVALLLVLSRQAVRFLSTLALCLAVFCPVAVNAAVSDQLTLTAEEEAWRQAHPVLRVGSEVDWAPYNFHEDGEPLGFSVDIMRLVAQRLDVELEFVGPEHWPELEDRLLNGSVDVLLNTVRTPAREQSMLFSPPYGAAPVGIASRLNAPVTSLTLGSSLRVAVPRGFFTERLLPERHPDIELVIAEGTVASLMAVALGEADATVGAYPALRHQIRANLLGQLAITGDYRLPDPDLTRLRFAVRKDQVILDELLRKALDTVSRHERAEILGRWLSADQELRPST 930 +Q LALR ALLLVLSRQAVR LS LALC A FC VAV+AAVSDQLTLTAEEEAWRQAHPVLRVGSEVDWAPYNF+EDGE LGFSVDIMRLVAQRL VELEFVGPEHWPELEDRLLNGSVDVLLNTVRTP REQSMLFSPPYGAAPVGIASRLNAPVTSLTLGSSLRVAVPRGFFTERLLPE HPDIELVIAEGTVASLMAVALGEADATVGAYPALRHQIRANLLGQLAITGDYRLPD DLTRLRFAVRKDQVILD+LLRKALDTVSRHERAEILGRWL+ADQEL PST Sbjct: 1 MQRLALRFAALLLVLSRQAVRILSPLALCFAGFCSVAVSAAVSDQLTLTAEEEAWRQAHPVLRVGSEVDWAPYNFYEDGETLGFSVDIMRLVAQRLGVELEFVGPEHWPELEDRLLNGSVDVLLNTVRTPEREQSMLFSPPYGAAPVGIASRLNAPVTSLTLGSSLRVAVPRGFFTERLLPELHPDIELVIAEGTVASLMAVALGEADATVGAYPALRHQIRANLLGQLAITGDYRLPDADLTRLRFAVRKDQVILDQLLRKALDTVSRHERAEILGRWLAADQELSPST 290
BLAST of mRNA_M-pyrifera_M_contig72432.17221.1 vs. uniprot
Match: UPI000F0B546E (PAS domain S-box protein n=1 Tax=Haliea alexandrii TaxID=2448162 RepID=UPI000F0B546E) HSP 1 Score: 465 bits (1197), Expect = 5.380e-147 Identity = 245/289 (84.78%), Postives = 257/289 (88.93%), Query Frame = 1 Query: 61 VQSLALRLVALLLVLSRQAVRFLSTLALCLAVFCPVAVNAAVSDQLTLTAEEEAWRQAHPVLRVGSEVDWAPYNFHEDGEPLGFSVDIMRLVAQRLDVELEFVGPEHWPELEDRLLNGSVDVLLNTVRTPAREQSMLFSPPYGAAPVGIASRLNAPVTSLTLGSSLRVAVPRGFFTERLLPERHPDIELVIAEGTVASLMAVALGEADATVGAYPALRHQIRANLLGQLAITGDYRLPDPDLTRLRFAVRKDQVILDELLRKALDTVSRHERAEILGRWLSADQELRPS 927 +Q L LRL ALL VLSR AVR LS L LC A FC VAV+AAVSDQLTLTAEE+AW QAHPVLRVGSEVDWAPYNFHE G+P GFSVD++RLVAQRL VELEF+GPEHWPELEDRLLNGS+DVLLNTVRTP REQSMLFSPPYG+APVGIAS L+APVTSL S LRVAVPRGFFTERLLPE HPDIELVIAEGTV SLMAVALGEADATVG YP LR QI ANLLGQLAITGDYRLPDPDLTRLR AVRKDQV+LD LLRKALDTVSRHERAEILGRW +DQ LRPS Sbjct: 1 MQPLFLRLAALLPVLSRPAVRILSPLVLCFAGFCSVAVSAAVSDQLTLTAEEKAWLQAHPVLRVGSEVDWAPYNFHEGGKPQGFSVDVIRLVAQRLGVELEFIGPEHWPELEDRLLNGSIDVLLNTVRTPGREQSMLFSPPYGSAPVGIASHLDAPVTSLPPESRLRVAVPRGFFTERLLPELHPDIELVIAEGTVESLMAVALGEADATVGVYPVLRQQITANLLGQLAITGDYRLPDPDLTRLRLAVRKDQVVLDLLLRKALDTVSRHERAEILGRWQVSDQALRPS 289
BLAST of mRNA_M-pyrifera_M_contig72432.17221.1 vs. uniprot
Match: UPI00041D01AA (PAS domain S-box protein n=1 Tax=Haliea salexigens TaxID=287487 RepID=UPI00041D01AA) HSP 1 Score: 453 bits (1166), Expect = 1.030e-142 Identity = 238/289 (82.35%), Postives = 253/289 (87.54%), Query Frame = 1 Query: 61 VQSLALRLVALLLVLSRQAVRFLSTLALCLAVFCPVAVNAAVSDQLTLTAEEEAWRQAHPVLRVGSEVDWAPYNFHEDGEPLGFSVDIMRLVAQRLDVELEFVGPEHWPELEDRLLNGSVDVLLNTVRTPAREQSMLFSPPYGAAPVGIASRLNAPVTSLTLGSSLRVAVPRGFFTERLLPERHPDIELVIAEGTVASLMAVALGEADATVGAYPALRHQIRANLLGQLAITGDYRLPDPDLTRLRFAVRKDQVILDELLRKALDTVSRHERAEILGRWLSADQELRPS 927 +Q+ LRL ALL VLSRQA+R LS LALCLA C AV+AA SDQLTLTAEEEAW QAHPVLRVGSEVDWAPYNF+EDG P GFSVD++R VAQRL VELEFVGPEHW ELEDRLLNGS+DVLLNTVRTP REQSMLFSPPYG+APVGIAS L+APVTSL GS+LRVAVPRGFFTE LLPE HPDIELVIA+GTV SLMAVALGEADATVG YP L QI ANLLG+LAITGDYRLPDPDLTRLR AVRKDQV LD LLRKALDT+SRHERAEILGRW DQ LRP+ Sbjct: 1 MQARVLRLAALLPVLSRQAIRILSLLALCLAGACSGAVSAAASDQLTLTAEEEAWLQAHPVLRVGSEVDWAPYNFYEDGRPQGFSVDVIRRVAQRLGVELEFVGPEHWSELEDRLLNGSIDVLLNTVRTPGREQSMLFSPPYGSAPVGIASHLDAPVTSLPPGSTLRVAVPRGFFTESLLPELHPDIELVIADGTVESLMAVALGEADATVGVYPVLHQQITANLLGRLAITGDYRLPDPDLTRLRLAVRKDQVALDRLLRKALDTISRHERAEILGRWQVTDQTLRPA 289
BLAST of mRNA_M-pyrifera_M_contig72432.17221.1 vs. uniprot
Match: A0A2E3P3Q2_9PROT (Histidine kinase n=1 Tax=Magnetovibrio sp. TaxID=2024836 RepID=A0A2E3P3Q2_9PROT) HSP 1 Score: 364 bits (934), Expect = 3.610e-111 Identity = 179/256 (69.92%), Postives = 211/256 (82.42%), Query Frame = 1 Query: 160 CPVAVNAAVSDQLTLTAEEEAWRQAHPVLRVGSEVDWAPYNFHEDGEPLGFSVDIMRLVAQRLDVELEFVGPEHWPELEDRLLNGSVDVLLNTVRTPAREQSMLFSPPYGAAPVGIASRLNAPVTSLTLGSSLRVAVPRGFFTERLLPERHPDIELVIAEGTVASLMAVALGEADATVGAYPALRHQIRANLLGQLAITGDYRLPDPDLTRLRFAVRKDQVILDELLRKALDTVSRHERAEILGRWLSADQELRPS 927 C ++A QLTLTAEE W HPVLRVG+EVDWAPYNFHEDG+PLG+S+D+MR++A RL V++EFVGPEHWPELE RL++G +D+LLNTVRTP+R+ SMLF+ PYG A VGIASRL+ PVTSL LRVAVPRGFFTE+LLP HP IELV+ EGTVASLMAVA+G ADATVGAYPALRHQI++NLLGQL +TGDYRLP+PDL RLR AVRKDQ +L LL KALDT S +RA++L RWL A+Q L+ S Sbjct: 21 CAPLLHAEPHAQLTLTAEERQWLDTHPVLRVGNEVDWAPYNFHEDGKPLGYSIDVMRVLASRLGVQIEFVGPEHWPELEARLISGDIDILLNTVRTPSRDASMLFTQPYGTATVGIASRLDTPVTSLERAQGLRVAVPRGFFTEQLLPAAHPGIELVLTEGTVASLMAVAVGNADATVGAYPALRHQIKSNLLGQLGVTGDYRLPEPDLARLRIAVRKDQPLLHGLLLKALDTFSPRQRADLLERWLDAEQALQVS 276
BLAST of mRNA_M-pyrifera_M_contig72432.17221.1 vs. uniprot
Match: UPI001908AAF7 (PAS domain S-box protein n=1 Tax=Thiocystis violacea TaxID=13725 RepID=UPI001908AAF7) HSP 1 Score: 191 bits (486), Expect = 3.880e-51 Identity = 98/236 (41.53%), Postives = 142/236 (60.17%), Query Frame = 1 Query: 193 QLTLTAEEEAWRQAHPVLRVGSEVDWAPYNFHEDGEPLGFSVDIMRLVAQRLDVELEFVGPEHWPELEDRLLNGSVDVLLNTVRTPAREQSMLFSPPYGAAPVGIASRLNAPVTSLTLGSSLRVAVPRGFFTERLLPERHPDIELVIAEGTVASLMAVALGEADATVGAYPALRHQIRANLLGQLAITGDYRLPDPDLTRLRFAVRKDQVILDELLRKALDTVSRHERAEILGRWL 900 ++ LTA E AW + HPV+R +E DW P+NF + GEP GFS+D M L+A +L +E+ + W D++ + +D++LN V+TP RE+ +LF+ PY P I SR +AP+ SL A PRGFF E +L +P IE ++ T+ASL AVA G+ADA +G LR+QI +LL L +TG++ + +PDL +R VR D +L L KA+ V E ++ RWL Sbjct: 48 EIHLTAHERAWLKQHPVIRAHNEQDWPPFNFRDQGEPRGFSIDYMNLLADKLGIEIHYQSGPDWNAFLDQIRDKRLDLMLNIVKTPERERFLLFTEPYATTPNVIVSRRDAPIASLAELDGRAAAFPRGFFQEEILARDYPGIERLVVTDTLASLKAVAFGKADAALGKDAVLRYQIGKHLLTNLRVTGEFDIGNPDLGNMRIGVRDDWPLLHAALGKAMAQVRPQELNDLRQRWL 283
BLAST of mRNA_M-pyrifera_M_contig72432.17221.1 vs. uniprot
Match: A0A1S7LMQ1_MAGMO (Histidine kinase n=1 Tax=Magnetococcus massalia (strain MO-1) TaxID=451514 RepID=A0A1S7LMQ1_MAGMO) HSP 1 Score: 184 bits (467), Expect = 1.290e-48 Identity = 93/253 (36.76%), Postives = 155/253 (61.26%), Query Frame = 1 Query: 172 VNAAVSDQLTLTAEEEAWRQAHPVLRVGSEVDWAPYNFHEDGEPLGFSVDIMRLVAQRLDVELEFVGPEHWPELEDRLLNGSVDVLLNTVRTPAREQSMLFSPPYGAAPVGIASRLNAPVTSLTLGSSLRVAVPRGFFTERLLPERHPDIELVIAEGTVASLMAVALGEADATVGAYPALRHQIRANLLGQLAITGDYRLPDPDLTRLRFAVRKDQVILDELLRKALDTVSRHERAEILGRWLSADQELRPST 930 ++ A + + LT +E+AW + +P +RV +E DWAP+NF E+G+P G S+D M L+AQ++ +++E++ W E + + G +DV+LN V+T R++ +L++PPY P I SR +AP +L ++VP+GFF E +L +P I+++ T+ S+ AV+ G+ADA +G + + ++L +A+TG+ ++ D L+ L A RKDQ +L +LRK L +SR E I RWL + + PST Sbjct: 24 ISWARAPEAVLTPQEQAWIKQNPTIRVHNETDWAPFNFAEEGQPKGLSIDTMNLLAQKVGLQVEYITGPTWSEFLEMMKQGQLDVMLNIVKTEDRQKYLLYTPPYVDNPNTILSRKSAPYHTLEQLEGKTISVPKGFFYEEILSRDYPRIKILPVRNTIDSIKAVSFGKADAALGELAVFNYLMTHHMLSDVAVTGEVKVGDHTLSLLNIATRKDQPLLASILRKGLKAISREESQAIKQRWLGSTAQ--PST 274
BLAST of mRNA_M-pyrifera_M_contig72432.17221.1 vs. uniprot
Match: I3Y8B1_THIV6 (Histidine kinase n=3 Tax=Thiocystis TaxID=13724 RepID=I3Y8B1_THIV6) HSP 1 Score: 182 bits (463), Expect = 4.430e-48 Identity = 94/236 (39.83%), Postives = 141/236 (59.75%), Query Frame = 1 Query: 193 QLTLTAEEEAWRQAHPVLRVGSEVDWAPYNFHEDGEPLGFSVDIMRLVAQRLDVELEFVGPEHWPELEDRLLNGSVDVLLNTVRTPAREQSMLFSPPYGAAPVGIASRLNAPVTSLTLGSSLRVAVPRGFFTERLLPERHPDIELVIAEGTVASLMAVALGEADATVGAYPALRHQIRANLLGQLAITGDYRLPDPDLTRLRFAVRKDQVILDELLRKALDTVSRHERAEILGRWL 900 ++ L+ E W + HP +RV +E DW P+NFH GEP GFS+D M L+A +L +++++ W + +R+ + +D++LN V+T R Q +LF+ PY P I SRL+ P+ S+ + VA+P+GFF E +L +P I + +ASL AVALG+ADA +G LR+QI+ NLL L ITG+ + DPD+ +R VR D +L L KA+ V+ E + RWL Sbjct: 40 EIPLSEPEREWLRQHPRIRVHNEQDWPPFNFHASGEPRGFSIDYMNLLAGKLGLQVDYQSGPSWNQFLERIRDKELDLMLNIVQTEERRQYLLFTEPYATTPNVIVSRLDDPIQSIAELAGRTVALPKGFFYEDVLTREYPTIRRLPVADALASLKAVALGQADAALGRDAVLRYQIKKNLLTNLKITGELTISDPDIAHMRIGVRNDWPLLRSALDKAMAAVAPEEIDALRQRWL 275
BLAST of mRNA_M-pyrifera_M_contig72432.17221.1 vs. uniprot
Match: A0A421K7S2_9GAMM (GGDEF domain-containing protein n=1 Tax=gamma proteobacterium symbiont of Stewartia floridana TaxID=1968599 RepID=A0A421K7S2_9GAMM) HSP 1 Score: 182 bits (462), Expect = 4.510e-48 Identity = 89/237 (37.55%), Postives = 145/237 (61.18%), Query Frame = 1 Query: 202 LTAEEEAWRQAHPVLRVGSEVDWAPYNFHEDGEPLGFSVDIMRLVAQRLDVELEFVGPEHWPELEDRLLNGSVDVLLNTVRTPAREQSMLFSPPYGAAPVGIASRLNAPVTSLTLGSSLRVAVPRGFFTERLLPERHPDIELVIAEGTVASLMAVALGEADATVGAYPALRHQIRANLLGQLAITGDYRLPDPDLTRLRFAVRKDQVILDELLRKALDTVSRHERAEILGRWLSADQ 912 LT EE + +AHPV+RV +E++W P+N+ +DGEP GFS+D M LVA+R E+E++ W E + G++DV+LN V+TP R++ +LF+ PY P I S+ + P S+ VAVP+GFFTE +L + +P+I L+ + ++ AV G+ADA +G H + +++ LAI+G+ + DP+ + L A RKD +L +LRK + +++ E+ E+ +WL + Sbjct: 280 LTQEELEFIEAHPVIRVHNELNWPPFNYTQDGEPQGFSIDFMNLVAERTGFEVEYISGPSWNEFLQMMKKGTLDVMLNIVKTPERQKYLLFTHPYADNPNAILSKKDKPYESIESLIGKTVAVPKGFFTEEILSKNYPEIRLLPLNNMLETMKAVTFGKADAALGELAVFSHLLNEHMMSDLAISGEALMGDPEYSLLNIATRKDLPLLAAILRKGMKSITPGEKKELQLKWLGVSE 516
BLAST of mRNA_M-pyrifera_M_contig72432.17221.1 vs. uniprot
Match: UPI000A4E94A4 (transporter substrate-binding domain-containing protein n=1 Tax=Candidatus Terasakiella magnetica TaxID=1867952 RepID=UPI000A4E94A4) HSP 1 Score: 182 bits (462), Expect = 5.420e-48 Identity = 86/242 (35.54%), Postives = 151/242 (62.40%), Query Frame = 1 Query: 181 AVSDQLTLTAEEEAWRQAHPVLRVGSEVDWAPYNFHEDGEPLGFSVDIMRLVAQRLDVELEFVGPEHWPELEDRLLNGSVDVLLNTVRTPAREQSMLFSPPYGAAPVGIASRLNAPVTSLTLGSSLRVAVPRGFFTERLLPERHPDIELVIAEGTVASLMAVALGEADATVGAYPALRHQIRANLLGQLAITGDYRLPDPDLTRLRFAVRKDQVILDELLRKALDTVSRHERAEILGRWLSA 906 A + + L+ EE+ W +PV++V +E DW P+N+ E+G PLGFS+D+M L+A+++ +++E+ W E D + G +DV+LN V+T R++ +L++PPY P I SR +AP SL V+VP+GFF E +L +P I++++ +GT+ ++ AV+ G+ADA +G H + +L+ +A++G+ ++ DP+L+ L A RKD L +L+K + ++ E+ I +WL + Sbjct: 28 AANHDIALSDEEKTWITKNPVIKVHNETDWPPFNYAENGNPLGFSIDVMNLIAEKVGLKVEYKTGPSWSEFLDMMRAGDLDVMLNIVKTADRQKYLLYTPPYADNPNTILSRTDAPFESLEQLFGKTVSVPKGFFYEEILKRDYPQIKVLLRDGTLETMKAVSFGQADAALGELAVFNHLLSKHLMTGVAVSGEVKMGDPELSLLNIATRKDLPTLASILKKGVQALTVEEKRSISIKWLQS 269 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig72432.17221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig72432.17221.1 >prot_M-pyrifera_M_contig72432.17221.1 ID=prot_M-pyrifera_M_contig72432.17221.1|Name=mRNA_M-pyrifera_M_contig72432.17221.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=310bp LCAAAIGKKVHSASWNRTVRVQSLALRLVALLLVLSRQAVRFLSTLALCLback to top mRNA from alignment at M-pyrifera_M_contig72432:197..1126+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig72432.17221.1 ID=mRNA_M-pyrifera_M_contig72432.17221.1|Name=mRNA_M-pyrifera_M_contig72432.17221.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=930bp|location=Sequence derived from alignment at M-pyrifera_M_contig72432:197..1126+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig72432:197..1126+ >mRNA_M-pyrifera_M_contig72432.17221.1 ID=mRNA_M-pyrifera_M_contig72432.17221.1|Name=mRNA_M-pyrifera_M_contig72432.17221.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1860bp|location=Sequence derived from alignment at M-pyrifera_M_contig72432:197..1126+ (Macrocystis pyrifera P11B4 male)back to top |