mRNA_M-pyrifera_M_contig7241.17218.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7241.17218.1
Unique NamemRNA_M-pyrifera_M_contig7241.17218.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig7241.17218.1 vs. uniprot
Match: D8LTS1_ECTSI (Myosin D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS1_ECTSI)

HSP 1 Score: 709 bits (1830), Expect = 1.220e-237
Identity = 354/372 (95.16%), Postives = 366/372 (98.39%), Query Frame = 1 
Query:    1 GYELEDLKLANEEDMDHVEDLIALPHLHEAAILHSLCRRFDRGEIYTFTANAILLAVNPFKRLPLYSKELLTEYYNMGYMRQQGIEPPQPLGPHVFAIADSAYRDMMKGIHAGKSAGMGPVNQSILISGESGAGKTESTKFVMRYLTTVGNGEDGVELEKGSIMDRVLQSNPILEAFGNARTIRNDNSSRFGKFIELMFDKRGNLLGAGIETYLLEKVRLPTQSENERNFHIFYQMCKGGDDEERERWELQGPEEYHFVNQGDCYDLRKVEDEDEFVLTKAALETMGFEDSSVQTIFDIMAGLIHLGELEFEAQEEDEAAVLSEDDDNTECMARVCRLCYLPEEGLLRALTSKTIEVGPRKEKTTIKLKDHQ 1116
            GYELEDLKLANEEDMDHVEDLIALPHLHEAAILHSLCRRFDRG+IYTFTANAILLAVNPFKRLPLYSKELLTEY+NMGYMRQQGIEPPQ LGPHVFAIADSAYRDMMKGIHAGKSAGMGPVNQSILISGESGAGKTESTKFVMRYLTTVGNGEDGVELEKGSIMDRVLQSNPILEAFGNARTIRNDNSSRFGKFIELMF+KRGNLLGAGIETYLLEKVR+PTQ+ENERNFHIFYQMCKGGDDEERERWELQGPEEYHFVNQGDCYDLRKVEDEDEFV TKAAL TMGFE SS+QTIFDIMAGLIHLGELEFEA EEDEAA+LS++++N ECMARVCRLCYLPE+GLLRALTSKTIEVGPRKEKTTIKLKDHQ
Sbjct:   56 GYELEDLKLANEEDMDHVEDLIALPHLHEAAILHSLCRRFDRGDIYTFTANAILLAVNPFKRLPLYSKELLTEYFNMGYMRQQGIEPPQALGPHVFAIADSAYRDMMKGIHAGKSAGMGPVNQSILISGESGAGKTESTKFVMRYLTTVGNGEDGVELEKGSIMDRVLQSNPILEAFGNARTIRNDNSSRFGKFIELMFNKRGNLLGAGIETYLLEKVRIPTQAENERNFHIFYQMCKGGDDEERERWELQGPEEYHFVNQGDCYDLRKVEDEDEFVQTKAALTTMGFEASSIQTIFDIMAGLIHLGELEFEANEEDEAAMLSDEEENQECMARVCRLCYLPEDGLLRALTSKTIEVGPRKEKTTIKLKDHQ 427
[Close]
BLAST of mRNA_M-pyrifera_M_contig7241.17218.1 vs. uniprot
Match: A0A6H5KDB8_9PHAE (Myosin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KDB8_9PHAE)

HSP 1 Score: 677 bits (1747), Expect = 8.020e-235
Identity = 337/372 (90.59%), Postives = 357/372 (95.97%), Query Frame = 1 
Query:    1 GYELEDLKLANEEDMDHVEDLIALPHLHEAAILHSLCRRFDRGEIYTFTANAILLAVNPFKRLPLYSKELLTEYYNMGYMRQQGIEPPQPLGPHVFAIADSAYRDMMKGIHAGKSAGMGPVNQSILISGESGAGKTESTKFVMRYLTTVGNGEDGVELEKGSIMDRVLQSNPILEAFGNARTIRNDNSSRFGKFIELMFDKRGNLLGAGIETYLLEKVRLPTQSENERNFHIFYQMCKGGDDEERERWELQGPEEYHFVNQGDCYDLRKVEDEDEFVLTKAALETMGFEDSSVQTIFDIMAGLIHLGELEFEAQEEDEAAVLSEDDDNTECMARVCRLCYLPEEGLLRALTSKTIEVGPRKEKTTIKLKDHQ 1116
            GYELEDLKLAN+ +MDHVEDLIALPHLHEAAILHSLCRRFDRG+IYTFTANAILLA+NPFKRLP+Y KELLTE++++G MR+QGIEPPQ LGPHVFAIADSAYRDMMKG+ AGKSAGMGPVNQSILISGESGAGKTESTKFVMRYLTTVGNGE GVELEKGSIMDRVLQSNPILEAFGNARTIRNDNSSRFGKFIELMFDKRGNLLGAGIETYLLEKVR+PTQ+ +ERNFHIFYQMCKGGDDEERERWELQGPEEYHFVNQGDCYDLR+VEDEDEFV TKAAL TMGFE SS+QTIFDIMAGLIHLGELEFEA EED+AAVL  +DDN +C+ARVCRLCYLPEEGLLRALTSKTIEVGPRKEKTTIKL DHQ
Sbjct:    5 GYELEDLKLANDAEMDHVEDLIALPHLHEAAILHSLCRRFDRGDIYTFTANAILLAINPFKRLPIYGKELLTEHFDVGCMREQGIEPPQALGPHVFAIADSAYRDMMKGMDAGKSAGMGPVNQSILISGESGAGKTESTKFVMRYLTTVGNGEGGVELEKGSIMDRVLQSNPILEAFGNARTIRNDNSSRFGKFIELMFDKRGNLLGAGIETYLLEKVRIPTQAHDERNFHIFYQMCKGGDDEERERWELQGPEEYHFVNQGDCYDLRQVEDEDEFVKTKAALTTMGFEASSIQTIFDIMAGLIHLGELEFEASEEDDAAVLFHEDDNEDCLARVCRLCYLPEEGLLRALTSKTIEVGPRKEKTTIKLTDHQ 376
[Close]
BLAST of mRNA_M-pyrifera_M_contig7241.17218.1 vs. uniprot
Match: A0A6H5LBZ3_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBZ3_9PHAE)

HSP 1 Score: 661 bits (1705), Expect = 1.030e-231
Identity = 337/372 (90.59%), Postives = 350/372 (94.09%), Query Frame = 1 
Query:    1 GYELEDLKLANEEDMDHVEDLIALPHLHEAAILHSLCRRFDRGEIYTFTANAILLAVNPFKRLPLYSKELLTEYYNMGYMRQQGIEPPQPLGPHVFAIADSAYRDMMKGIHAGKSAGMGPVNQSILISGESGAGKTESTKFVMRYLTTVGNGEDGVELEKGSIMDRVLQSNPILEAFGNARTIRNDNSSRFGKFIELMFDKRGNLLGAGIETYLLEKVRLPTQSENERNFHIFYQMCKGGDDEERERWELQGPEEYHFVNQGDCYDLRKVEDEDEFVLTKAALETMGFEDSSVQTIFDIMAGLIHLGELEFEAQEEDEAAVLSEDDDNTECMARVCRLCYLPEEGLLRALTSKTIEVGPRKEKTTIKLKDHQ 1116
            GYELEDLKLAN+E+MDHVEDLIALPHLHEAAILHSLCRRFDRG+IYTFTANAILLAVNPFKRLPLYSKELLTEY+NMGYMRQQGIEPPQ LGPHVFAIADSAYRDMMKGIHAGKSAGMGPVNQSILISGESGAGKTESTKFVMR       G  G E       DRVLQSNPILEAFGNARTIRNDNSSRFGKFIELMF+KRGNLLGAGIETYLLEKVR+PTQ+ENERNFHIFYQMCKGGDDEERERWELQGPEEYHFVNQGDCYDLRKVEDEDEFV TKAAL TMGFEDSS+QTIFDIMAGLIHLGELEFEA EEDEAA+LS++++N ECMARVCRLCYLPEEGLLRALTSKTIEVGPRKEKTTIKLKDHQ
Sbjct:   56 GYELEDLKLANDEEMDHVEDLIALPHLHEAAILHSLCRRFDRGDIYTFTANAILLAVNPFKRLPLYSKELLTEYFNMGYMRQQGIEPPQALGPHVFAIADSAYRDMMKGIHAGKSAGMGPVNQSILISGESGAGKTESTKFVMR-------GSCGRE------WDRVLQSNPILEAFGNARTIRNDNSSRFGKFIELMFNKRGNLLGAGIETYLLEKVRIPTQAENERNFHIFYQMCKGGDDEERERWELQGPEEYHFVNQGDCYDLRKVEDEDEFVQTKAALTTMGFEDSSIQTIFDIMAGLIHLGELEFEANEEDEAAMLSDEEENQECMARVCRLCYLPEEGLLRALTSKTIEVGPRKEKTTIKLKDHQ 414
[Close]
BLAST of mRNA_M-pyrifera_M_contig7241.17218.1 vs. uniprot
Match: A0A835YXT9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT9_9STRA)

HSP 1 Score: 483 bits (1242), Expect = 8.680e-152
Identity = 261/409 (63.81%), Postives = 304/409 (74.33%), Query Frame = 1 
Query:    1 GYELEDLKLANEEDMDHVEDLIALPHLHEAAILHSLCRRFDRGEIYTFTANAILLAVNPFKRLPLYSKELLTEYYNMGYMRQQGIEPPQPLGPHVFAIADSAYRDMMKGIHAGKS-AGMG-PVNQSILISGESGAGKTESTKFVMRYLTTVGNGEDGVELEKGSIMDRVLQ---------------------------------SNPILEAFGNARTIRNDNSSRFGKFIELMFDKRGNLLGAGIETYLLEKVRLPTQSENERNFHIFYQMCKGGDDEERERWELQGPEEYHFVNQGDCYDLRKVEDEDEFVLTKAALETMGFEDSSVQTIFDIMAGLIHLGELEFEAQEEDEAAVLSEDDDNTECMARVCRLCYLPEEGLLRALTSKTIEVGPR--KEKTTIKLKDHQ 1116
            G EL+D+KLANEE+MD V+DLI LPHLHEAAILHSL +RF+ G IYTFTANAILLAVNPFK LPLY  +LL EYY  G MRQQGIE    L PHVFAIADSAYRDMM+GIHAG   A MG  VNQSILISGESGAGKTESTK VM+YLT+VGN     ELE+GS+MDRVLQ                                 SNPILEAFGNARTIRNDNSSRFGKFIEL+FDKRG LLGA IETYLLEKVR+P QSENERNFHIFYQM KG  DEERERW L+GPEEY+F+NQGDC+DL ++ED++EFVLTK A++ MGF     ++IF ++A L+HLG++EFE+  +D  A+ S D+D    +  VCRL  LP  GL  ALT +T+E+G +  +E  TIKL++ Q
Sbjct:  276 GIELDDVKLANEEEMDCVDDLIQLPHLHEAAILHSLTQRFEMGSIYTFTANAILLAVNPFKSLPLYGLKLLQEYYTEGVMRQQGIETATRLAPHVFAIADSAYRDMMQGIHAGTGGAAMGMSVNQSILISGESGAGKTESTKVVMKYLTSVGNANGITELEEGSVMDRVLQTSMMLRTRVTPNARASARTLIMTPXXXXXCALQSNPILEAFGNARTIRNDNSSRFGKFIELLFDKRGLLLGAAIETYLLEKVRIPNQSENERNFHIFYQMTKGASDEERERWALEGPEEYYFINQGDCFDLSRMEDDEEFVLTKKAMQLMGFSAEDQESIFSLVASLLHLGQVEFESGPDD-FAIFSSDEDCQSALQHVCRLACLPRAGLEHALTQRTLEIGAKTMQEVHTIKLEERQ 683
[Close]
BLAST of mRNA_M-pyrifera_M_contig7241.17218.1 vs. uniprot
Match: A0A7S2Y0D6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0D6_9STRA)

HSP 1 Score: 405 bits (1041), Expect = 3.670e-125
Identity = 227/377 (60.21%), Postives = 277/377 (73.47%), Query Frame = 1 
Query:    7 ELEDLKLANEEDMDHVEDLIALPHLHEAAILHSLCRRFDRGEIYTFTANAILLAVNPFKRLPLYSKELLTEYYNMGYMRQQGIEPPQPLGPHVFAIADSAYRDMMKGIH----AGKSAGMGPVNQSILISGESGAGKTESTKFVMRYLTTVGN--GEDGVE-LEKGSIMDRVLQSNPILEAFGNARTIRNDNSSRFGKFIELMFDKRGNLLGAGIETYLLEKVRLPTQSENERNFHIFYQMCKGGDDEERERWELQGPEEYHFVNQGDCYDLRKVEDEDEFVLTKAALETMGFEDSSVQTIFDIMAGLIHLGELEFEAQEEDEAAVLSEDDDNTECMARVCRLCYLPEEGLLRALTSKTIEVGPRKEKTTIKLKDHQ 1116
            EL+DLKLAN+     VED+I+LPHLHE AILHSL  R+  GEIYTFT   ILLAVNPF+ LPLY+KE+L +YY+ G +R QG+E      PHVF+IAD+AYR M+K +H    A  SAG G  +QSILISGESGAGKTESTKFVMRYL  VGN  G  G+  + KGSIMDRVLQSNPILEAFGNARTIRNDNSSRFGKFIEL FD+RG+L+GA I+TYLLEKVRLP  ++NERNFH+FYQ+CKG   E +E+  L+   +YH+VNQGDCYDL  ++D +EF  T  A+  MGFE + V +IF I+AGL+HLG++EF+  E  E +VLSEDD       +   LC+L    LL+A+  + +E   R E   IKLK HQ
Sbjct:   58 ELDDLKLANDPKSALVEDMISLPHLHEPAILHSLSERYKTGEIYTFTG-PILLAVNPFQDLPLYTKEVLEQYYSNGMLRAQGLEVSID-APHVFSIADAAYRAMVKAMHTRGTAAPSAGGGNGSQSILISGESGAGKTESTKFVMRYLIAVGNPEGTAGIAAVTKGSIMDRVLQSNPILEAFGNARTIRNDNSSRFGKFIELKFDRRGHLMGASIQTYLLEKVRLPRHAKNERNFHVFYQLCKGAPPELQEQLGLEDIHDYHYVNQGDCYDLTHIDDVEEFNNTLHAMSVMGFEKADVDSIFSIVAGLLHLGQVEFQPDESGEGSVLSEDDYVKSEYDKAAALCFLNVSELLQAMCIRLMET--RGEVFEIKLKVHQ 430
[Close]
BLAST of mRNA_M-pyrifera_M_contig7241.17218.1 vs. uniprot
Match: A0A7S4DA52_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA52_HETAK)

HSP 1 Score: 350 bits (899), Expect = 9.670e-111
Identity = 201/371 (54.18%), Postives = 249/371 (67.12%), Query Frame = 1 
Query:    7 ELEDLKLANEEDMDHVEDLIALPHLHEAAILHSLCRRFDRGEIYTFTANAILLAVNPFKRLPLYSKELLTEYYNMGYMRQQGIEPPQPLGPHVFAIADSAYRDMMKGI-------------HAGKSAGMGPVNQSILISGESGAGKTESTKFVMRYLTTVGNGEDGVELEKGSIMDRVLQSNPILEAFGNARTIRNDNSSRFGKFIELMFDKRGNLLGAGIETYLLEKVRLPTQSENERNFHIFYQMCKG-GDDEERERWELQGPEEYHFVNQGDCYDLRKVEDEDEFVLTKAALETMGFEDSSVQTIFDIMAGLIHLGELEFEAQE--EDEAAVLSEDDDNTECMARVCRLCYLPEEGLLRALTSKTIEV 1071
            EL+D+KLAN+  M   ED+I LP LHE AILHSL  R++ GEIYTFT   ILLAVNPFK LPLY+ E+L EYY  G +R QG+E      PHV++IAD+AYR+MMK I               G   G G  +QSILISGESGAGKTESTK VMRYLT VGN E    +  GSIMD+VLQSNPILEAFGNARTIRNDNSSRFGKFIEL FD+RG+LLGA + TYLLEKVRLP+Q   ER+FHIFYQ+CKG        ++ L G EEY ++N G C+DL  V+D DE   T   +  MGF ++ V  +  + AG++HLG+L FE+    E E + ++E  +    +A+   LC L    L  ALT+ ++ +
Sbjct:   56 ELDDVKLANDPKMALSEDMINLPFLHEPAILHSLSERYEEGEIYTFTG-PILLAVNPFKDLPLYTNEILEEYYTNGMLRGQGLEVVSE-APHVYSIADAAYREMMKTIMNISGAPRRVPKQKEGSFGGDG--SQSILISGESGAGKTESTKIVMRYLTAVGNPEGITAVAAGSIMDKVLQSNPILEAFGNARTIRNDNSSRFGKFIELRFDRRGHLLGAALRTYLLEKVRLPSQGPGERSFHIFYQLCKGLMAGRVDPKYGLSGCEEYAYLNGGGCFDLTHVDDLDELAATLHGMRVMGFTEAEVDAVLSVTAGVLHLGQLRFESVHTGEGEGSKVAEAPEVGAALAKARELCALDPARLEAALTTNSVSI 422
[Close]
BLAST of mRNA_M-pyrifera_M_contig7241.17218.1 vs. uniprot
Match: K3X6F0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6F0_GLOUD)

HSP 1 Score: 328 bits (840), Expect = 3.170e-98
Identity = 180/358 (50.28%), Postives = 246/358 (68.72%), Query Frame = 1 
Query:    7 ELEDLKLANEEDMDHVEDLIALPHLHEAAILHSLCRRFDRGEIYTFTANAILLAVNPFKRLPLYSKELLTEYYNMGYMRQQGIEPPQPLGPHVFAIADSAYRDMMKGIHAGKSAGMGPVNQSILISGESGAGKTESTKFVMRYLTTVGNGEDGVELEKGSIMDRVLQSNPILEAFGNARTIRNDNSSRFGKFIELMFDKRGNLLGAGIETYLLEKVRLPTQSENERNFHIFYQMCKGGDDEERERWELQGPEEYHFVNQGDCYDLRK-VEDEDEFVLTKAALETMGFEDSSVQTIFDIMAGLIHLGELEFEAQEED---EAAVLSEDDDNTECMARVCRLCYLPEEGLLRALTSKTIE 1068
            ++ D+ LAN  DMD VEDLI LPHLHE  I H+L  RF   EIYT T   ILLA+NPFK + +YS +++ +Y   G  R  G E P  + PHVF+IAD AYR +M  +   KS+  G  NQSIL+SGESGAGKTESTKFVM+YL T+   + G E + G++M +VL SNPILE+FGNARTIRNDNSSRFGKFI++ F +RGNL+GA I+TYLLEKVRL  Q+E+ERN+HIFY++  G   EE+ERW+L  P E+H++NQ  C   +  V+D ++F + K A++ MGF++  +++IF  ++ L+HLG LEF+ ++ +   E + +S  D   E M  V     + + GL  A+ S+ I+
Sbjct:   61 QIHDIMLANSHDMDLVEDLIQLPHLHEPGICHTLNERFKISEIYTLTGE-ILLAINPFKDIGIYSDKIMRKYIRNGDKRDLGNEVPD-MPPHVFSIADKAYRSLMSPLT--KSSHGGQSNQSILVSGESGAGKTESTKFVMQYLATISQAQKGSE-DDGNVMKQVLSSNPILESFGNARTIRNDNSSRFGKFIKMQFSERGNLIGASIQTYLLEKVRLAYQAESERNYHIFYEIIAGASSEEKERWKLMAPTEFHYLNQSTCVKRKDGVDDAEQFSVLKNAMQVMGFDEEIMESIFVTISALLHLGNLEFDEKQLESGTEGSTIS--DSCEESMQVVLNYLEVDKVGLEEAICSRKIQ 411
[Close]
BLAST of mRNA_M-pyrifera_M_contig7241.17218.1 vs. uniprot
Match: A0A662WR15_9STRA (Myosin motor domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WR15_9STRA)

HSP 1 Score: 308 bits (788), Expect = 3.820e-97
Identity = 162/310 (52.26%), Postives = 216/310 (69.68%), Query Frame = 1 
Query:   10 LEDLKLANEEDMDHVEDLIALPHLHEAAILHSLCRRFDRGEIYTFTANAILLAVNPFKRLPLYSKELLTEYYNMGYMRQQGIEPPQPLGPHVFAIADSAYRDMMKGIHAGKSAGMGPVNQSILISGESGAGKTESTKFVMRYLTTVGNGEDGVELEKGSIMDRVLQSNPILEAFGNARTIRNDNSSRFGKFIELMFDKRGNLLGAGIETYLLEKVRLPTQSENERNFHIFYQMCKGGDDEERERWELQGPEEYHFVNQGDCYDLRK-VEDEDEFVLTKAALETMGFEDSSVQTIFDIMAGLIHLGELEFE 936
            +E + LAN  DMD VEDLI LPHLHE  I H+L  RF   EIYT T   ILLA+NPFK + +Y+ ++  +Y   G  R  G E P  + PHVF+IAD AYR +M  I      G+   NQSIL+SGESGAGKTESTKFVM+YL T+   +     E G++M +VL SNPILE+FGNARTIRNDNSSRFGKFI++ F  +GNL+GA I+TYLLEKVRL  Q+E+ERN+HIFY++  G    E++RW L+ P ++H++NQ  C      V D ++F + K A++TMGF++  +++IF  ++ L+H+G LEF+
Sbjct:   63 VEGVLLANSSDMDVVEDLIQLPHLHEPGICHTLNERFKIDEIYTLTGE-ILLAINPFKNVGIYTDKITRKYIRNGDKRALGHEVPD-MPPHVFSIADKAYRSLMNPIAQSSHGGVS--NQSILVSGESGAGKTESTKFVMKYLATISQHK--ASAEDGNVMKQVLSSNPILESFGNARTIRNDNSSRFGKFIKMEFSPQGNLIGASIQTYLLEKVRLAYQAESERNYHIFYEIIAGASSAEKKRWNLKAPTKFHYLNQSTCIKRNDGVNDAEQFQVLKNAMQTMGFDEDDMESIFVTISALLHIGNLEFD 366
[Close]
BLAST of mRNA_M-pyrifera_M_contig7241.17218.1 vs. uniprot
Match: A0A482SDW9_9ARCH (Myosin motor domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDW9_9ARCH)

HSP 1 Score: 290 bits (741), Expect = 4.050e-93
Identity = 152/254 (59.84%), Postives = 187/254 (73.62%), Query Frame = 1 
Query:   52 VEDLIALPHLHEAAILHSLCRRFDRGEIYTFTANAILLAVNPFKRLPLYSKELLTEYYNMGYMRQQGIEPPQPLGPHVFAIADSAYRDMMKGIHA-----------GKSAGMGPVNQSILISGESGAGKTESTKFVMRYLTTVGNGEDGVELEKGSIMDRVLQSNPILEAFGNARTIRNDNSSRFGKFIELMFDKRGNLLGAGIETYLLEKVRLPTQSENERNFHIFYQMCKGGDDEERERWELQGPEEYHFVN 780
            VE+LI LP+LHE AIL  L  R+  G+IYT+T   IL+A+NPFK LPLYS E L  YYN G ++ QGIE   PL PHVFAIAD++YR+MM+ +H            G SA +   +QSILISGESGAGKTESTKFV+RYLT+VG+ +   E E+GS+MD+VLQSNPILEAFGNART+R+DNSSRFGKFIEL F KRG+L+G  I TYLLEKVRLP Q   ER+FHIFYQ+  G   E+R  W+L    +Y +++
Sbjct:    2 VENLINLPYLHEPAILFCLQERYTSGDIYTYTG-PILIALNPFKTLPLYSSETLEGYYNHGLLKSQGIELGAPLAPHVFAIADASYREMMRLMHGQGFSRFSSSSNGSSASIVSADQSILISGESGAGKTESTKFVLRYLTSVGSSQ-AEEKERGSVMDKVLQSNPILEAFGNARTLRSDNSSRFGKFIELQFSKRGHLIGGSIRTYLLEKVRLPLQQRGERSFHIFYQLFAGSTAEQRALWQLGEVHQYRYID 253
[Close]
BLAST of mRNA_M-pyrifera_M_contig7241.17218.1 vs. uniprot
Match: A0A7S3HSJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HSJ7_9STRA)

HSP 1 Score: 301 bits (772), Expect = 4.260e-92
Identity = 159/307 (51.79%), Postives = 209/307 (68.08%), Query Frame = 1 
Query:  184 RLPLYSKELLTEYYNMGYMRQQGIEPPQPLGPHVFAIADSAYRDMMKGIHAGKSAG-----------MGPVNQSILISGESGAGKTESTKFVMRYLTTVGNGEDGVELEKGSIMDRVLQSNPILEAFGNARTIRNDNSSRFGKFIELMFDKRGNLLGAGIETYLLEKVRLPTQSENERNFHIFYQMCKGGDDEERERWELQGPEEYHFVNQGDCYDLRKVEDEDEFVLTKAALETMGFEDSSVQTIFDIMAGLIHLGELEFEAQE--EDEAAVLSEDDDNTECMARVCRLCYLPEEGLLRALTSKTI 1065
            R+PLY+ ++L  YYN G ++ QGIE    L PHV+AIAD+AYR+MM+ I +G  A              P N SILISGESGAGKTESTK V+RYLTTVGN    + +E GS+MD+VLQSNPILEAFGNART+RNDNSSRFGKFIEL F+KRG+L+G  I TYLLEKVRLPTQ   ERNFHIFYQ+  GG +EERERW     E++ +V  G  ++L+ ++D+ EF L K ALET+ F  +   ++ D+ A L+HLG++ F      E E + +++D ++   +A+   L  L    + + LT +TI
Sbjct:    1 RVPLYTNQILEVYYNEGLLKSQGIESGNHLPPHVYAIADAAYREMMRVIMSGFGAHGSTSSKSPHSTQAPANHSILISGESGAGKTESTKIVLRYLTTVGNSTGDMNVESGSVMDKVLQSNPILEAFGNARTLRNDNSSRFGKFIELSFNKRGHLIGGVIRTYLLEKVRLPTQQRGERNFHIFYQLAAGGSEEERERWGFSSIEDFDYVLHGGVFELKSMDDKQEFQLLKHALETLNFAPADQVSLLDMTAALLHLGQVNFIGVHSGEGEGSAVADDVESRRSLAKAAELLGLDVNAIAQTLTQRTI 307
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7241.17218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTS1_ECTSI1.220e-23795.16Myosin D n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A6H5KDB8_9PHAE8.020e-23590.59Myosin motor domain-containing protein n=2 Tax=Ect... [more]
A0A6H5LBZ3_9PHAE1.030e-23190.59Myosin motor domain-containing protein n=1 Tax=Ect... [more]
A0A835YXT9_9STRA8.680e-15263.81P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2Y0D6_9STRA3.670e-12560.21Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4DA52_HETAK9.670e-11154.18Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
K3X6F0_GLOUD3.170e-9850.28Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A662WR15_9STRA3.820e-9752.26Myosin motor domain-containing protein (Fragment) ... [more]
A0A482SDW9_9ARCH4.050e-9359.84Myosin motor domain-containing protein n=1 Tax=arc... [more]
A0A7S3HSJ7_9STRA4.260e-9251.79Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7241contigM-pyrifera_M_contig7241:921..7346 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score711.8
Seed ortholog evalue1.6e-202
Seed eggNOG ortholog2880.D8LTS1
KEGG koko:K10357
Hectar predicted targeting categoryother localisation
GOsGO:0000146,GO:0000166,GO:0000278,GO:0000281,GO:0000302,GO:0000910,GO:0001891,GO:0001931,GO:0003674,GO:0003774,GO:0003779,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005826,GO:0005829,GO:0005856,GO:0005886,GO:0005938,GO:0006928,GO:0006935,GO:0006950,GO:0006970,GO:0006971,GO:0006979,GO:0006996,GO:0007010,GO:0007015,GO:0007033,GO:0007049,GO:0007154,GO:0008064,GO:0008092,GO:0008104,GO:0008144,GO:0008150,GO:0008360,GO:0009267,GO:0009581,GO:0009582,GO:0009605,GO:0009612,GO:0009628,GO:0009636,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010243,GO:0010639,GO:0014070,GO:0014074,GO:0015629,GO:0016020,GO:0016043,GO:0016050,GO:0016459,GO:0016460,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022402,GO:0022603,GO:0022604,GO:0022607,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030038,GO:0030048,GO:0030139,GO:0030554,GO:0030587,GO:0030832,GO:0030833,GO:0030837,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0030898,GO:0031033,GO:0031034,GO:0031152,GO:0031154,GO:0031254,GO:0031268,GO:0031270,GO:0031333,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032009,GO:0032060,GO:0032153,GO:0032155,GO:0032271,GO:0032272,GO:0032502,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032796,GO:0032956,GO:0032970,GO:0032982,GO:0032991,GO:0033036,GO:0033043,GO:0033275,GO:0033298,GO:0033554,GO:0034461,GO:0034622,GO:0035639,GO:0036094,GO:0040011,GO:0042221,GO:0042330,GO:0042493,GO:0042542,GO:0042594,GO:0042623,GO:0042641,GO:0042802,GO:0042803,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044459,GO:0044464,GO:0044764,GO:0044877,GO:0045177,GO:0045179,GO:0045335,GO:0046677,GO:0046683,GO:0046847,GO:0046983,GO:0048519,GO:0048523,GO:0048856,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0050982,GO:0051015,GO:0051017,GO:0051128,GO:0051129,GO:0051179,GO:0051301,GO:0051493,GO:0051494,GO:0051591,GO:0051606,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0060327,GO:0060328,GO:0061572,GO:0061640,GO:0065003,GO:0065007,GO:0065008,GO:0070252,GO:0070938,GO:0071496,GO:0071840,GO:0071889,GO:0071944,GO:0090066,GO:0090702,GO:0097159,GO:0097204,GO:0097367,GO:0097435,GO:0097708,GO:0098630,GO:0098743,GO:0099120,GO:0099568,GO:0099738,GO:0110053,GO:0120025,GO:0120031,GO:0120036,GO:1901265,GO:1901363,GO:1901698,GO:1901700,GO:1902903,GO:1902904,GO:1903047,GO:1990753
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5022@1,KOG0160@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03019,ko03029,ko04131,ko04812
Exons8
Model size1116
Cds size1116
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7241.17218.1prot_M-pyrifera_M_contig7241.17218.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7241 921..7346 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816620.7689342-CDS-M-pyrifera_M_contig7241:920..10501622816620.7689342-CDS-M-pyrifera_M_contig7241:920..1050Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7241 921..1050 -
1692278081.5439537-CDS-M-pyrifera_M_contig7241:920..10501692278081.5439537-CDS-M-pyrifera_M_contig7241:920..1050Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7241 921..1050 -
1622816620.7792702-CDS-M-pyrifera_M_contig7241:1327..14611622816620.7792702-CDS-M-pyrifera_M_contig7241:1327..1461Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7241 1328..1461 -
1692278081.5583966-CDS-M-pyrifera_M_contig7241:1327..14611692278081.5583966-CDS-M-pyrifera_M_contig7241:1327..1461Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7241 1328..1461 -
1622816620.7892554-CDS-M-pyrifera_M_contig7241:2637..27351622816620.7892554-CDS-M-pyrifera_M_contig7241:2637..2735Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7241 2638..2735 -
1692278081.5791497-CDS-M-pyrifera_M_contig7241:2637..27351692278081.5791497-CDS-M-pyrifera_M_contig7241:2637..2735Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7241 2638..2735 -
1622816620.8009725-CDS-M-pyrifera_M_contig7241:3568..36711622816620.8009725-CDS-M-pyrifera_M_contig7241:3568..3671Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7241 3569..3671 -
1692278081.6021538-CDS-M-pyrifera_M_contig7241:3568..36711692278081.6021538-CDS-M-pyrifera_M_contig7241:3568..3671Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7241 3569..3671 -
1622816620.8113368-CDS-M-pyrifera_M_contig7241:4517..45991622816620.8113368-CDS-M-pyrifera_M_contig7241:4517..4599Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7241 4518..4599 -
1692278081.627338-CDS-M-pyrifera_M_contig7241:4517..45991692278081.627338-CDS-M-pyrifera_M_contig7241:4517..4599Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7241 4518..4599 -
1622816620.823446-CDS-M-pyrifera_M_contig7241:4964..51021622816620.823446-CDS-M-pyrifera_M_contig7241:4964..5102Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7241 4965..5102 -
1692278081.641879-CDS-M-pyrifera_M_contig7241:4964..51021692278081.641879-CDS-M-pyrifera_M_contig7241:4964..5102Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7241 4965..5102 -
1622816620.841562-CDS-M-pyrifera_M_contig7241:6130..62371622816620.841562-CDS-M-pyrifera_M_contig7241:6130..6237Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7241 6131..6237 -
1692278081.6521688-CDS-M-pyrifera_M_contig7241:6130..62371692278081.6521688-CDS-M-pyrifera_M_contig7241:6130..6237Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7241 6131..6237 -
1622816620.8542902-CDS-M-pyrifera_M_contig7241:7022..73461622816620.8542902-CDS-M-pyrifera_M_contig7241:7022..7346Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7241 7023..7346 -
1692278081.66156-CDS-M-pyrifera_M_contig7241:7022..73461692278081.66156-CDS-M-pyrifera_M_contig7241:7022..7346Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7241 7023..7346 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7241.17218.1

>prot_M-pyrifera_M_contig7241.17218.1 ID=prot_M-pyrifera_M_contig7241.17218.1|Name=mRNA_M-pyrifera_M_contig7241.17218.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=372bp
GYELEDLKLANEEDMDHVEDLIALPHLHEAAILHSLCRRFDRGEIYTFTA
NAILLAVNPFKRLPLYSKELLTEYYNMGYMRQQGIEPPQPLGPHVFAIAD
SAYRDMMKGIHAGKSAGMGPVNQSILISGESGAGKTESTKFVMRYLTTVG
NGEDGVELEKGSIMDRVLQSNPILEAFGNARTIRNDNSSRFGKFIELMFD
KRGNLLGAGIETYLLEKVRLPTQSENERNFHIFYQMCKGGDDEERERWEL
QGPEEYHFVNQGDCYDLRKVEDEDEFVLTKAALETMGFEDSSVQTIFDIM
AGLIHLGELEFEAQEEDEAAVLSEDDDNTECMARVCRLCYLPEEGLLRAL
TSKTIEVGPRKEKTTIKLKDHQ
back to top

mRNA from alignment at M-pyrifera_M_contig7241:921..7346-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7241.17218.1 ID=mRNA_M-pyrifera_M_contig7241.17218.1|Name=mRNA_M-pyrifera_M_contig7241.17218.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6426bp|location=Sequence derived from alignment at M-pyrifera_M_contig7241:921..7346- (Macrocystis pyrifera P11B4 male)
GGGTACGAGCTGGAGGACCTCAAGCTGGCGAACGAGGAGGACATGGACCA
CGTGGAAGACCTCATCGCGCTGCCCCACCTCCACGAGGCCGCCATTTTAC
ACTCCCTGTGCAGGCGTTTCGACCGGGGGGAGATTTATACGTTCACCGCA
AACGCCATCCTGCTCGCTGTGAACCCTTTCAAGAGGCTGCCTCTGTACTC
CAAGGAGCTGTTGACGGAGTACTACAACATGGGATACATGCGGCAACAGG
GGATTGAACCGCCGCAGCCCTTGGGCCCGCACGTCTTCGCTATCGCGGAT
TCAGCCTACCGTGATATGATGAAGGTGTGGTGGCAGGGATGGGCGTGATC
ACAGGGCAGGCCGTGGTGGCGGCGGCGGTGGTGGTGGTGGTGGTGGCGGC
GGTGGAAGTGGTGGCATAGATGATGATAGTGTTGGGGGGGGGGGGGGGGG
GGGGGGGGTGCAGGTGGGGGGGGCAGGGAGAAGTTAAGGTGGGCGGCGGG
GGTCCCGTTTTGAACGAGGCCAACCTNNNNNNNNNNGTGGTGGGGGGGGG
GGGGGGGGTGGGGGGGGGTGGGGGGGATGTTGAGTGGTGGGGGGGGGGGG
GGGGGGTGGGGGGGGGTGTCGGTGTTGCAGGTGGAGGTGGTATGGTAGAG
ATATTGTCGTCGCGCGCGTTCCCGTTTCGAAACCGGCCACTCTTTTGCCA
CCCTATCTACGGCAGTGGCGGTGGCAGTGACAGCGCTGGCTATAGACCTA
CTCTTGGAATCCCTACCGTAGTGAAATAATTCCTCCGAGTCGGTTGCGTG
ATCCTGTGGAGCTCTCTCTCTCTCGTCCGTTCTCTTGAATTCGACTCGCC
CCGATGTTCCTTTCTGGGTTGGCATTGACACAAGTGTGTAACGGTCGCGG
TGTACCTTTTTTGCGTGGGGGTGTGGGGTTTGACAGGCGCGTTGGTTTTG
ATTGCTGTCCGCGGGGTCTTTTTTTATTTGGCTCGGAGTTGCTCATGTGC
GTTTCTGTCCTGTCCTGTCCTGTCCTGTCCTGTCCTGTCCTGTCCTGTCC
TGTCCTGTCCTGTCCTGTCCTGTCCTGTCCTTCGTACTACCGCCGCTGAC
GTTCACCAGGGTATTCATGCAGGAAAGTCTGCAGGCATGGGGCCCGTGAA
TCAGTCCATCCTTATCTCCGGGGAGAGCGGGGCGGGGAAAACGGAGAGCA
CGAAATTTGTCATGAGGTGGGCGCTACCGTAACACTATCGTTACTGCTAC
GGTTACCGCTGCTGTTACCTCTAGTGTTGCCTTGAACGATTACGGTTACC
GCTAGCTTTTATCGTTACTTTCAATGCTGCATTTAACGATTACGTGTTAC
CGCTAGTTACTTTTACGGTACAGCCACGGTTACGGTAATGTTACCTTGGA
TGGTGCCCTTAACGATTACTGTTACCGCTAGCTTTACCGTTGCCTTCACC
GGTGCAGTTAGGGCTACCGTTGCCGTCATCGTCACCGTATCGGCTACGGT
TACCGTTCGCATCACGGTTACGGCTACCGTTTACCGTTACTACTATCGTT
ACAGTACCACTTTGTATACCGCTATTACGGGGGTCCATAGTTAATAGGAC
CTATGGCATACATAAAAACCTATATATTTCTCTATTTTTACTAACAATAT
TTGGTCTCGTTAACTATAGACCCCCGTAATAGCATTCCGTTACGACTACG
AGCGCTCTCGTGTATGTGGGAGAAAAGATGGAAAAAAAGGAAGTTCGACG
TATTGAATAGTAGGTGTGGAGTATCAAACCATTTGTCGAAGCTGGACTAA
GCCGTGAACACTACTATTGCTGCTTGAGTAATACTATACCTGGTAAGTTG
GTGCGGACTATCAACCATTTGGTCGAAGCTGGACCATGCCATTAGCCCTA
CAACTTGAAGTAATGCTTTAAGTTAAGCTGGACCATCAACCATTTTGTCG
AGCGTGGACCGAATCGTAACCCTCCCCCTGGTTTTAGAAAACAACTAACA
AAGGGCCAGGTTTTTATCACCCGGTTGGTTATATAACACCCCCCTTGGCT
GGTGCGCCTCTCAAGCTATACGTAAAATAGGATACCAGATGCATATCAAC
CGGGATTCTCACTATAAGAATTTTCGGCGCCGCATATCATAAGAGAGCAA
TTGCAGAGGGGTATCAGAGCCCTTTTTCCGATGGGGAGATATAAGACAGT
TTCGCGCTCGTGTCAATTTGTTGAAAACCGAAAAAAAAAATCAGGTACTT
GACGACGGTGGGGAATGGAGAAGATGGTGTGGAGCTCGAGAAGGGCTCCA
TCATGGACAGGGTGCTGCAGAGCAACCCTATCCTCGAAGCATTCGGTAAC
GCGCGAACCATCCGGAACGACAATTCGTCTCGGTGAGTCCAGTCCGCCCC
TGTTGAGCCCGTCGCTGTAGCTGTGAGTCGCCTGAAAGCATGCAGTTAGC
TATAGGGGTAGTGGTCGTGTTACCGTGATAGATATCACCCATGGGTGGTA
AGATAACACACCCCCTGGAAAAATAATTCCGAGCCGAATTTCTCCAAAAC
CAGGGGAGGCATATATATCATCACATGTATGCGTCACTGAAAGTGCAGTG
TTTTTGTTGTTGTTAGTTTTGCGCCAATTTTATTCGTTTTGTCATCCACG
CTCTTCCTTGATAGCACGGTTGTTAATTTCTTCCTTATCTTGTTCGCTCT
TTCTCCTCCGCCCCTCCCTACCACCTGCTCTCTGCTTGCCTGTGAAGTTT
CGGAAAGTTTATCGAGCTGATGTTCGATAAGCGCGGAAACCTCTTGGGTG
CGGGTATCGAGACCTACCTCTTGGAGAAGGTGCGGCTCTGTCTGTGTAAT
CGCTGTTGTCGATAGCTGTGTTGTCTGTGTGCACTGGCTGTTTCATCAAT
CAATCATCAGTTGTTGCATCAACTGATCAACCTATTACAACATGATTCAA
TCTACCGACCCATCAATCAATCAATCAATCAATCAATCGACCATTCAAAG
TACCAACCCATCAATCAATCACCCAATCAACAAATCAACCAGTCCGTCAA
TCACGCAACCAAGCAATCAGTGAAATCGGCCAATCGATCGATCAACCCAT
TCATCCGTCCATGATTGAATCAACCCACCAAATCAACCAATCAATCGCAC
ATGGTCATTTCGTCATCTCCAAGTGGCTTAAAATACACCGGTGTAAAAGA
TACTTCCATATATATTAGCCAAATGTCTCCAAATGTTCCCAGTGTAGAAC
ATGCTTCCATCTATGTGAATACCCCTTGAATGTGGCTGCGCGATGTAATG
CGCGGGCAGAGTTGAGCACCGAGACCGTTCTTCAGTTGTTTACGGAAACC
GAAGTTCGATTTTCGGCAAGCGAAACAATGCGCTTAAAATTGTTTTTTTT
TCAGACCGTACAATTGGTTCCGTTAATTCGGTCGGTTTTTCACGCGCACG
TTTGCTTTTCGCCGTCAGAGTTCCGTCTCTCTGGGGCGCCCTTCTCCTCT
TACTTGTGTTTAGATTGTTTTTCTTCCTTTTTTCAAGGCAAGTACCAACC
GGTGCCTGGCAGCTATTTTTCCTTCTATTTACGTTCCGTTCTTTTTTTAT
TCCTTCTTTTTTTTGTTACATTTGTCCGCTTTTTCCTTTTTTTTTTTTTC
TTGTCTCTTTTTTTATTGTGGGCAGGTGCGACTCCCCACCCAATCAGAGA
ACGAACGAAACTTCCACATCTTCTACCAGATGTGCAAGGGGGGAGACGAC
GAGGAGAGGGAGCGCTGGGAGTTGCAGGGTAAGTAGAGGGGGGCTGGGCA
CTGGCTGACTCGGTCAGTATCGATATTACGGTCGTCAAAATCAGTCAGTA
TGCTGGAGTGCAGCGGTATAATGTGTCTCCTCTCTTTTATCTCCTCTCTT
CTACGTATCTCCTCCCGAAACGCATGTGGTGGGTTTCCGTGCTATAACAT
GGCGTTTTTCTTGGACGTACGTAAGATAAATAATACTGGCGAATATACTG
GCTGGGTCACGCAGTAGATTACTCTCTGCCAGTAGATTACTGTTGCGATT
ACATACTGTGCCAGTGCCCAGCCCTAGTATATACCAGTTAGACAGTATGA
AAAAAAGGTTTTGTTGGTGTCTGTTTCTTGCGGTTCTGTTTTTTTTCCCG
ACATATGTGCATCGCCTTTTCACCGATTTTTAGCTGATTTTTTTGGTTGT
ACATTTTTCTCAACTGCTGAGAGTTTCAGGTGTAAGGATAAATTTCATGA
GTGACAAGTTTGTTTTCCTTCCGTTCTTTGTCGTTTTTCTCTGTTGGCAT
TCGCTTTGTTGTTTTCTGTTTCGCTTCGTTTCGTCCCGCGTTTTTTTTTT
TTTTCGTAGAGCGTCGGGAGTTGCAGGGTTAAAGAAGGATGGCGGAAAAT
CCTCGGGGTACGTTTTATCCCTTTCGTTCACTTGTTTTTTTTTTTTTTCG
GGTTTTTTCTCCCTGCGGCGCATTTGCCCTGTTTTTGCTATTTTTTCTTC
TCCTTTTGTTTGTTGTTGATTGTTATCTTTTGTTGGTTCTTCGGCGCAAG
CAAGCACCTGGTATGCCACGTCCTGACTGTTTCAACCTCGGCCTCCTGCC
GCTTTTGTCAGGTCCCGAGGAGTACCACTTCGTGAACCAAGGGGACTGCT
ACGACCTCAGGAAGGTCGAAGACGAGGACGAGTTCGTCCTCACCAAGGCC
GCCCTCGAAGTGAGTATGTACCTCGCACTTACGGGCGGATTATTTACTGC
CTACCGCTCTGACCCCAAATATAAGGACCGTTTAGGCTGAATAATTATAC
GCTGAAGTTCCCTGTATTTCGGGTCAGAGTGGTATATATATGAGCAGCGT
GAGCGCCCAAGCACTACACGTGTGTAGGGTCAGGTTGCGCGCGTCCGTGT
TGCCGTACGCCGCACGAGTCCTTGCGTTGTGTCCGTTGTAAGTCGGTCAC
CAACCATTTGTATCACCCCTCGAATCACGCGGTGAGGTCGATGTTTTTGT
AACCCCCGGTCACTTGTTATCGTTCGATTTTTTTTTTTTTTTGCCTCTGA
AAGTCCCCAAGAGGTTTTTGATAGATCATACTACAGATCCATGTAAATCT
CATCTACAGATGGATAAGCTAGATCGTAACCCGCCGGTATGATTTGTCGG
GCAGGATTGTACGTATACGTACGTGGTGCATTTTCAACACGGGAAAATGT
GCTACTGCTATATTGATGGATAGGTCATGCGGGTTATACGGTTCTCACCT
GGCCCTCGAAATGTGTGTGTGTGTTTTTTACTTTTAGGTCTCGTCACGAG
AACGTACGCAAACTGCAACCGTACTCTCGTGTGTTTTTAGAGTGACTACT
CGTGTACCGTGGTGGGGAGGGCCATGGAATAAGCACGTACATGATGAGAG
TTGTGGGATGGGGGGCACAGACAGTTGAGGCGGCTTTCACGGCATTCACA
GTGCTTCGCTTGTAATTCCTGGGCGGTCGCTTCCGCGACATGACGGTCGT
TGCCGCCGTTTTGCTGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCGC
TGCTGCTGCTGCTATTGCTGCTATTACGGGGGACCATAGTTATTAATAAT
AGGACCGTCTGGTATACATAAAAACCTCTATATTTACCTTTTTTTTTACT
AACAATATTTGGTCCTATTTACTGTGGTCCCCCGTAGTAGTTGTCTTGTT
TATGGTCCATAGTTAACAGGACCTATGGTATACATAAAAACCTATATATT
TACCTTTTTTTACTAACAAAATTTGGTCCTATTTACTATGGCTCCCCGTA
GCAGTGGTTTTGTTTGTGTTGGTGCTGTCGCGGTCTCTGCTTACCGTTGT
GATTTGTAAAACTGTCTTCTGACGCACATTCGCAGACGATGGGTTTCGAG
GACAGCTCGGTGCAGACGATCTTCGACATCATGGCCGGGCTGATCCACTT
GGGGGAGCTCGAGTTCGAGGCCCAGGAGGAGGACGAGGCCGCCGTGTTGT
CCGAAGACGATGATAACACGTGAGGATGGATGGGCATCTCTTATTCAACA
CTATTAGTAAAAAAAAAAAAAACTCACTTCAAACAGATCGTCGGTTCCCA
CTCTGTCCGTAAATATAAGAAACTTTTGAATTGAATATTAGTATAGAATT
GGTCTCTATATTGGTACCAGGTATTGTTTAGCCCCCTACCCACCCCACCC
CACCCTACCCCACCCCATCCACCCACGCACACCCCGCCTAACCCCCGTAC
CCCCGTCCCCCCTCCCGATCATTTTGACATACCGAACGCGCCGCAGCGAG
TGCATGGCGCGAGTGTGTCGGCTCTGCTACCTCCCGGAGGAGGGCCTGCT
CCGGGCGCTGACGAGCAAGACGATCGAGGTCGGGCCCCGGAAAGAGAAGA
CGACGATCAAGCTCAAGGACCATCAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig7241:921..7346-

>mRNA_M-pyrifera_M_contig7241.17218.1 ID=mRNA_M-pyrifera_M_contig7241.17218.1|Name=mRNA_M-pyrifera_M_contig7241.17218.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2232bp|location=Sequence derived from alignment at M-pyrifera_M_contig7241:921..7346- (Macrocystis pyrifera P11B4 male)
GGGTACGAGCTGGAGGACCTCAAGCTGGCGAACGAGGAGGACATGGACCA
CGTGGAAGACCTCATCGCGCTGCCCCACCTCCACGAGGCCGCCATTTTAC
ACTCCCTGTGCAGGCGTTTCGACCGGGGGGAGATTTATACGTTCACCGCA
AACGCCATCCTGCTCGCTGTGAACCCTTTCAAGAGGCTGCCTCTGTACTC
CAAGGAGCTGTTGACGGAGTACTACAACATGGGATACATGCGGCAACAGG
GGATTGAACCGCCGCAGCCCTTGGGCCCGCACGTCTTCGCTATCGCGGAT
TCAGCCTACCGTGATATGATGAAGGGGTACGAGCTGGAGGACCTCAAGCT
GGCGAACGAGGAGGACATGGACCACGTGGAAGACCTCATCGCGCTGCCCC
ACCTCCACGAGGCCGCCATTTTACACTCCCTGTGCAGGCGTTTCGACCGG
GGGGAGATTTATACGTTCACCGCAAACGCCATCCTGCTCGCTGTGAACCC
TTTCAAGAGGCTGCCTCTGTACTCCAAGGAGCTGTTGACGGAGTACTACA
ACATGGGATACATGCGGCAACAGGGGATTGAACCGCCGCAGCCCTTGGGC
CCGCACGTCTTCGCTATCGCGGATTCAGCCTACCGTGATATGATGAAGGG
TATTCATGCAGGAAAGTCTGCAGGCATGGGGCCCGTGAATCAGTCCATCC
TTATCTCCGGGGAGAGCGGGGCGGGGAAAACGGAGAGCACGAAATTTGTC
ATGAGGGTATTCATGCAGGAAAGTCTGCAGGCATGGGGCCCGTGAATCAG
TCCATCCTTATCTCCGGGGAGAGCGGGGCGGGGAAAACGGAGAGCACGAA
ATTTGTCATGAGGTACTTGACGACGGTGGGGAATGGAGAAGATGGTGTGG
AGCTCGAGAAGGGCTCCATCATGGACAGGGTGCTGCAGAGCAACCCTATC
CTCGAAGCATTCGGTAACGCGCGAACCATCCGGAACGACAATTCGTCTCG
GTACTTGACGACGGTGGGGAATGGAGAAGATGGTGTGGAGCTCGAGAAGG
GCTCCATCATGGACAGGGTGCTGCAGAGCAACCCTATCCTCGAAGCATTC
GGTAACGCGCGAACCATCCGGAACGACAATTCGTCTCGTTTCGGAAAGTT
TATCGAGCTGATGTTCGATAAGCGCGGAAACCTCTTGGGTGCGGGTATCG
AGACCTACCTCTTGGAGAAGTTTCGGAAAGTTTATCGAGCTGATGTTCGA
TAAGCGCGGAAACCTCTTGGGTGCGGGTATCGAGACCTACCTCTTGGAGA
AGGTGCGACTCCCCACCCAATCAGAGAACGAACGAAACTTCCACATCTTC
TACCAGATGTGCAAGGGGGGAGACGACGAGGAGAGGGAGCGCTGGGAGTT
GCAGGGTGCGACTCCCCACCCAATCAGAGAACGAACGAAACTTCCACATC
TTCTACCAGATGTGCAAGGGGGGAGACGACGAGGAGAGGGAGCGCTGGGA
GTTGCAGGGTCCCGAGGAGTACCACTTCGTGAACCAAGGGGACTGCTACG
ACCTCAGGAAGGTCGAAGACGAGGACGAGTTCGTCCTCACCAAGGCCGCC
CTCGAAGTCCCGAGGAGTACCACTTCGTGAACCAAGGGGACTGCTACGAC
CTCAGGAAGGTCGAAGACGAGGACGAGTTCGTCCTCACCAAGGCCGCCCT
CGAAACGATGGGTTTCGAGGACAGCTCGGTGCAGACGATCTTCGACATCA
TGGCCGGGCTGATCCACTTGGGGGAGCTCGAGTTCGAGGCCCAGGAGGAG
GACGAGGCCGCCGTGTTGTCCGAAGACGATGATAACACACGATGGGTTTC
GAGGACAGCTCGGTGCAGACGATCTTCGACATCATGGCCGGGCTGATCCA
CTTGGGGGAGCTCGAGTTCGAGGCCCAGGAGGAGGACGAGGCCGCCGTGT
TGTCCGAAGACGATGATAACACCGAGTGCATGGCGCGAGTGTGTCGGCTC
TGCTACCTCCCGGAGGAGGGCCTGCTCCGGGCGCTGACGAGCAAGACGAT
CGAGGTCGGGCCCCGGAAAGAGAAGACGACGATCAAGCTCAAGGACCATC
AGCGAGTGCATGGCGCGAGTGTGTCGGCTCTGCTACCTCCCGGAGGAGGG
CCTGCTCCGGGCGCTGACGAGCAAGACGATCGAGGTCGGGCCCCGGAAAG
AGAAGACGACGATCAAGCTCAAGGACCATCAG
back to top