Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 1698 |
Cds size | 1041 |
Stop | 0 |
Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816616.8553488-CDS-M-pyrifera_M_contig721:29298..30339 | 1622816616.8553488-CDS-M-pyrifera_M_contig721:29298..30339 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig721 29299..30339 - |
1692278079.8044178-CDS-M-pyrifera_M_contig721:29298..30339 | 1692278079.8044178-CDS-M-pyrifera_M_contig721:29298..30339 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig721 29299..30339 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816616.8676918-UTR-M-pyrifera_M_contig721:30339..30996 | 1622816616.8676918-UTR-M-pyrifera_M_contig721:30339..30996 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig721 30340..30996 - |
1692278079.8178215-UTR-M-pyrifera_M_contig721:30339..30996 | 1692278079.8178215-UTR-M-pyrifera_M_contig721:30339..30996 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig721 30340..30996 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig721.17161.1 >prot_M-pyrifera_M_contig721.17161.1 ID=prot_M-pyrifera_M_contig721.17161.1|Name=mRNA_M-pyrifera_M_contig721.17161.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=347bp
MVNLRNRCAQESCTHTATSNFVGIKKPIFCVQHAEVGMGNVKYRRCSHDT CTKQPSYNIEGRKAAAFCKEHAADGMLDVVSNSCLHDTCTKQSSCNFEGS RTPMFCKQHALGGMINIKARRCLKESCMTTPSWNVEGSKAPVFCKQHARK GMVNVAGRRCAYDSCLTSPTFNVIGSKKAAFCKQHAEGGMVNVRVSRCLK ESCTKEANFNCVGSKAASFCRNHAQDAMVDFRLKCGRDSCANCPTFNFEG SKEPAFCEQHKEEDMVNIRMDRCSHDACVTAPSFNFKGSKDPAFCRKHAQ EGLINLRVKPCPHDGCMTSPSFNIKDSKRPAFCEQHAKNGMVRVPHK back to topmRNA from alignment at M-pyrifera_M_contig721:29299..30996- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig721.17161.1 ID=mRNA_M-pyrifera_M_contig721.17161.1|Name=mRNA_M-pyrifera_M_contig721.17161.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1698bp|location=Sequence derived from alignment at M-pyrifera_M_contig721:29299..30996- (Macrocystis pyrifera P11B4 male) TGCCTCCACGAGCCTTGTCAAGTATCAGCGAGCTTCAACTTCAAAGGCAG
CAAGAAACCAGAATTTTGCAAGCAACATGCCGAAGCCAGCATGGTGAACA
TCGTCAGCAAGCGTTGTTCGCACGACCCCTGCGAGATGGTGCCGAGCTTG
GGGGTCCAAGGAAGCAAGACTGCGCTATGCTGTAGGAGACATGCTGAAGA
TGGCATGGTTAATGTCCTTGTCAGACGCTGCTTTTTTGATGCCTGCACGA
CGTTGCCAAGTTTCAACGTCCAGGGCGGTAAGCGGGCGGTGTTCTGCAAG
AAACATGCTGAGGACGGTATGGTAAGGGTGATTAACAATCGTTGCTCACA
TGATACCTGCGTGACCTCAGCGAGCTTCAACATCAAAGGCGTCAGAAAAG
CGTTCTGCAAGAAACATGCTGAGGACGGCATGGTGAATGTCTCGGGGCCG
CGTTGCTCACACGGCACTTGCACGACCGCACCACACTTTAATTCCAAGGG
CAGCGGTGTGGCTGCGTTCTGCAAGAAACATGCTGGTGACGGCATGTAGA
ACGTTAATGTCAAGACTTGCTCCCAGGATACATGCCGGACGGCGTCGAGC
TTCAATTTCGTGGGGAGCAAGACGTTCGCGTTTTGCAAGCAACATGCCGA
GGACGGCATGGTAAACCTCCGCAACCGATGCGCACAGGAATCGTGTACGC
ACACCGCGACCTCCAATTTCGTGGGCATCAAGAAGCCAATATTCTGTGTG
CAACATGCTGAGGTCGGCATGGGGAACGTCAAATACAGGCGCTGTTCGCA
TGATACCTGCACGAAGCAGCCGAGCTACAATATCGAGGGCAGGAAGGCGG
CGGCGTTCTGCAAGGAGCATGCCGCGGACGGCATGTTGGACGTTGTCTCC
AATAGTTGTTTACATGATACATGCACGAAGCAATCATCTTGTAATTTCGA
AGGCAGCAGAACGCCGATGTTCTGCAAACAACATGCTTTGGGTGGTATGA
TCAACATTAAAGCCAGACGTTGCTTAAAGGAATCCTGCATGACTACCCCA
TCCTGGAATGTCGAAGGAAGCAAGGCGCCGGTATTCTGCAAGCAACACGC
CAGGAAAGGCATGGTGAACGTTGCTGGCAGGCGTTGCGCATATGATTCCT
GCTTGACTTCGCCGACCTTTAATGTGATCGGCAGTAAGAAAGCAGCATTC
TGCAAGCAGCACGCCGAGGGCGGCATGGTGAACGTTCGCGTTAGTCGTTG
CTTGAAGGAATCCTGCACGAAGGAAGCAAATTTCAACTGCGTGGGTAGTA
AGGCAGCCTCGTTCTGCAGGAATCATGCCCAGGATGCAATGGTGGATTTC
CGCCTCAAATGTGGACGGGACTCCTGTGCAAATTGCCCGACTTTCAATTT
CGAAGGCAGCAAGGAGCCTGCTTTCTGCGAGCAGCACAAAGAGGAAGATA
TGGTCAATATCCGCATGGATAGATGCTCACATGATGCCTGTGTGACGGCG
CCGAGCTTCAACTTCAAGGGCAGCAAGGATCCCGCGTTCTGCAGGAAACA
TGCTCAGGAAGGCTTGATCAACCTCCGCGTAAAACCTTGCCCACATGATG
GATGCATGACCTCGCCGAGCTTCAACATCAAGGACAGCAAACGCCCTGCG
TTCTGCGAACAACACGCCAAGAATGGCATGGTTCGTGTCCCCCATAAA back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig721:29299..30996- >mRNA_M-pyrifera_M_contig721.17161.1 ID=mRNA_M-pyrifera_M_contig721.17161.1|Name=mRNA_M-pyrifera_M_contig721.17161.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2082bp|location=Sequence derived from alignment at M-pyrifera_M_contig721:29299..30996- (Macrocystis pyrifera P11B4 male) ATGGTAAACCTCCGCAACCGATGCGCACAGGAATCGTGTACGCACACCGC GACCTCCAATTTCGTGGGCATCAAGAAGCCAATATTCTGTGTGCAACATG CTGAGGTCGGCATGGGGAACGTCAAATACAGGCGCTGTTCGCATGATACC TGCACGAAGCAGCCGAGCTACAATATCGAGGGCAGGAAGGCGGCGGCGTT CTGCAAGGAGCATGCCGCGGACGGCATGTTGGACGTTGTCTCCAATAGTT GTTTACATGATACATGCACGAAGCAATCATCTTGTAATTTCGAAGGCAGC AGAACGCCGATGTTCTGCAAACAACATGCTTTGGGTGGTATGATCAACAT TAAAGCCAGACGTTGCTTAAAGGAATCCTGCATGACTACCCCATCCTGGA ATGTCGAAGGAAGCAAGGCGCCGGTATTCTGCAAGCAACACGCCAGGAAA GGCATGGTGAACGTTGCTGGCAGGCGTTGCGCATATGATTCCTGCTTGAC TTCGCCGACCTTTAATGTGATCGGCAGTAAGAAAGCAGCATTCTGCAAGC AGCACGCCGAGGGCGGCATGGTGAACGTTCGCGTTAGTCGTTGCTTGAAG GAATCCTGCACGAAGGAAGCAAATTTCAACTGCGTGGGTAGTAAGGCAGC CTCGTTCTGCAGGAATCATGCCCAGGATGCAATGGTGGATTTCCGCCTCA AATGTGGACGGGACTCCTGTGCAAATTGCCCGACTTTCAATTTCGAAGGC AGCAAGGAGCCTGCTTTCTGCGAGCAGCACAAAGAGGAAGATATGGTCAA TATCCGCATGGATAGATGCTCACATGATGCCTGTGTGACGGCGCCGAGCT TCAACTTCAAGGGCAGCAAGGATCCCGCGTTCTGCAGGAAACATGCTCAG GAAGGCTTGATCAACCTCCGCGTAAAACCTTGCCCACATGATGGATGCAT GACCTCGCCGAGCTTCAACATCAAGGACAGCAAACGCCCTGCGTTCTGCG AACAACACGCCAAGAATGGCATGGTTCGTGTCCCCCATAAAATGGTAAAC CTCCGCAACCGATGCGCACAGGAATCGTGTACGCACACCGCGACCTCCAA TTTCGTGGGCATCAAGAAGCCAATATTCTGTGTGCAACATGCTGAGGTCG GCATGGGGAACGTCAAATACAGGCGCTGTTCGCATGATACCTGCACGAAG CAGCCGAGCTACAATATCGAGGGCAGGAAGGCGGCGGCGTTCTGCAAGGA GCATGCCGCGGACGGCATGTTGGACGTTGTCTCCAATAGTTGTTTACATG ATACATGCACGAAGCAATCATCTTGTAATTTCGAAGGCAGCAGAACGCCG ATGTTCTGCAAACAACATGCTTTGGGTGGTATGATCAACATTAAAGCCAG ACGTTGCTTAAAGGAATCCTGCATGACTACCCCATCCTGGAATGTCGAAG GAAGCAAGGCGCCGGTATTCTGCAAGCAACACGCCAGGAAAGGCATGGTG AACGTTGCTGGCAGGCGTTGCGCATATGATTCCTGCTTGACTTCGCCGAC CTTTAATGTGATCGGCAGTAAGAAAGCAGCATTCTGCAAGCAGCACGCCG AGGGCGGCATGGTGAACGTTCGCGTTAGTCGTTGCTTGAAGGAATCCTGC ACGAAGGAAGCAAATTTCAACTGCGTGGGTAGTAAGGCAGCCTCGTTCTG CAGGAATCATGCCCAGGATGCAATGGTGGATTTCCGCCTCAAATGTGGAC GGGACTCCTGTGCAAATTGCCCGACTTTCAATTTCGAAGGCAGCAAGGAG CCTGCTTTCTGCGAGCAGCACAAAGAGGAAGATATGGTCAATATCCGCAT GGATAGATGCTCACATGATGCCTGTGTGACGGCGCCGAGCTTCAACTTCA AGGGCAGCAAGGATCCCGCGTTCTGCAGGAAACATGCTCAGGAAGGCTTG ATCAACCTCCGCGTAAAACCTTGCCCACATGATGGATGCATGACCTCGCC GAGCTTCAACATCAAGGACAGCAAACGCCCTGCGTTCTGCGAACAACACG CCAAGAATGGCATGGTTCGTGTCCCCCATAAA back to top
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