mRNA_M-pyrifera_M_contig71273.16996.1 (mRNA) Macrocystis pyrifera P11B4 male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig71273.16996.1 vs. uniprot
Match: A0A5A8DUR9_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DUR9_CAFRO) HSP 1 Score: 283 bits (723), Expect = 4.120e-89 Identity = 152/244 (62.30%), Postives = 185/244 (75.82%), Query Frame = 1 Query: 1 MPREIITVQVGQCGNQIGWKFWDLALREHGSRATAPVFDEAMSTFFRNVDPRTS--RDVVGERVGPGGERISALASLRARAVLVDTEEGVLSQVLGSRLGRELFDRSTQVVSDVSGAGNNWAHGYYEYGSRYTPMVMEQVRRALEAAESPQAFLLLHSLGGGTGSGLGTSVLHGLTESFPELDRITCSVFPSDDDDVITSPYNAALATRVLADDADAVLPIENARLQTIVEGSGS--GRSGGLS 720 MPRE++TVQVGQCGNQIGW+FWDLALREH + + VFDEAMS FFRNVD R S RDV G G +S +ASLRARAVLVD EEGV+SQVL L R+LFD S QV++DVSG+GNNWAHG+ EYG +Y ++E+VR ALEA ESPQ+F +LHS+GGGTGSGLGT +L L ++FPEL R VFPS+DDDV+TSPYN ALA L++ AD V+P+EN L +IV+ + + GRSG S Sbjct: 1 MPRELVTVQVGQCGNQIGWRFWDLALREHAAASPDGVFDEAMSAFFRNVDERYSVPRDVESFVDGSGAS-VSKVASLRARAVLVDMEEGVVSQVLSGPL-RDLFDES-QVITDVSGSGNNWAHGFCEYGPQYGDAILERVRTALEACESPQSFFVLHSMGGGTGSGLGTYILGQLHDAFPELYRFVSPVFPSEDDDVVTSPYNTALALAQLSEHADCVMPVENGALSSIVDRAATLAGRSGASS 241
BLAST of mRNA_M-pyrifera_M_contig71273.16996.1 vs. uniprot
Match: A0A7S3GKL4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GKL4_9EUKA) HSP 1 Score: 252 bits (643), Expect = 2.820e-81 Identity = 129/227 (56.83%), Postives = 159/227 (70.04%), Query Frame = 1 Query: 1 MPREIITVQVGQCGNQIGWKFWDLALREHGSRATAPVFDEAMSTFFRNVDPRTSRDVVGERVGPGGERISALASLRARAVLVDTEEGVLSQVLGSRLGRELFDRSTQVVSDVSGAGNNWAHGYYEYGSRYTPMVMEQVRRALEAAESPQAFLLLHSLGGGTGSGLGTSVLHGLTESFPELDRITCSVFPSDDDDVITSPYNAALATRVLADDADAVLPIENARLQTI 681 MPREI+T+QVGQCGNQIGW+FWDL LREH AT +DE MSTFF N + G RV GG + L+ARAVLVDTE GVL+ + S++G + + Q V+DV G+GNNWAHGY+EYG +Y VME+VRR E +S Q+F LLHSLGGGTGSGLG+++L L + + E+ R T SV PSDDDDV+TSPYN+ ATR L + AD VLPIEN LQ + Sbjct: 1 MPREIVTIQVGQCGNQIGWRFWDLLLREHALHATNATYDEPMSTFFMNDE--------GGRVEGGGAVGRKIKKLKARAVLVDTETGVLNATMKSQIGEIFY--AAQFVADVYGSGNNWAHGYHEYGGKYREEVMEKVRRTTEQCDSLQSFFLLHSLGGGTGSGLGSAILEALADDYKEVYRFTASVMPSDDDDVVTSPYNSVFATRHLIEYADCVLPIENQALQMV 217
BLAST of mRNA_M-pyrifera_M_contig71273.16996.1 vs. uniprot
Match: A0A0M0JR88_9EUKA (Tubulin epsilon chain n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JR88_9EUKA) HSP 1 Score: 253 bits (646), Expect = 2.970e-78 Identity = 143/241 (59.34%), Postives = 172/241 (71.37%), Query Frame = 1 Query: 1 MPREIITVQVGQCGNQIGWKFWDLALREHGSRATAPVFDEAMSTFFRNVDPRTSRDVVGERVGPGGERISALASLRARAVLVDTEEGVLSQVLGSRLGRELFDRSTQVVSDVSGAGNNWAHGYYEYGSRYTPMVMEQVRRALEAAESPQAFLLLHSLGGGTGSGLGTSVLHGLTESFPELDRITCSVFPSDDDDVITSPYNAALATRVLADDADAVLPIENA---RLQTIVEGSGSGRSGG 714 MPREIITVQVGQCGNQIGW+FWDLALREH + A VFD+A+S+FFRNVD R + D V +G G ISAL RARAV+VDTEEGV++Q+L S L E+FDR+ Q+V+DVSGAGNNWAHG+ YG + +E VRRA +S Q F L+HSLGGGTGSGLGT +L L + +P+ R SVFPS DDDVITSPYNA LAT L + AD V P++NA L T +G G+ S G Sbjct: 1 MPREIITVQVGQCGNQIGWRFWDLALREHAAHNPAGVFDDALSSFFRNVDTRYT-DPVEIPLGDGTRPISAL---RARAVMVDTEEGVVNQLLKSPLA-EVFDRA-QLVTDVSGAGNNWAHGHAVYGPAHRENFLEAVRRAASTCDSLQCFSLIHSLGGGTGSGLGTYLLSALADEYPKQLRFATSVFPSADDDVITSPYNATLATAELIEHADVVFPVDNAALAELTTRAQGGGAVASEG 235
BLAST of mRNA_M-pyrifera_M_contig71273.16996.1 vs. uniprot
Match: A0A6U6CF00_GUITH (Hypothetical protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=A0A6U6CF00_GUITH) HSP 1 Score: 247 bits (630), Expect = 6.290e-76 Identity = 137/231 (59.31%), Postives = 172/231 (74.46%), Query Frame = 1 Query: 1 MPREIITVQVGQCGNQIGWKFWDLALREHGSRATA--PVFDEAMSTFFRNVDPRTSRDVVGERVGPGGERISALASLRARAVLVDTEEGVLSQVLGSRLGRELFDRSTQVVSDVSGAGNNWAHGYYEYGSRYTPMVMEQVRRALEAAESPQAFLLLHSLGGGTGSGLGTSVLHGLTESFPELDRITCSVFPSDDDDVITSPYNAALATRVLADDADAVLPIENARLQTIVE 687 MPRE+ITVQVGQCGNQIG +FWD+ALREH S +++ PVFDE++S+FFRNVD R+ R++ P G S + SLRARAVL+DTE GVL+ + L RELFD S Q++SD GAGNNWA G+ EYG +Y + E VR+ +E +S Q+F +LHSLGGGTGSGLGT VL L++ +PE+ R T SVFPS+DDDV+TSPYN+ALA + L+D AD VLPIEN L I E Sbjct: 1 MPRELITVQVGQCGNQIGCRFWDIALREHASVSSSKNPVFDESLSSFFRNVD-RSQRNL------PVG---SPITSLRARAVLIDTETGVLNSIQSGPL-RELFD-SRQLISDQYGAGNNWAQGHMEYGPKYRESIAECVRQTVEHCDSLQSFFVLHSLGGGTGSGLGTYVLSLLSDYYPEVYRFTASVFPSEDDDVVTSPYNSALALKKLSDHADCVLPIENQALVDIHE 219
BLAST of mRNA_M-pyrifera_M_contig71273.16996.1 vs. uniprot
Match: A0A5J4YDP7_9CHLO (Epsilon 1 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YDP7_9CHLO) HSP 1 Score: 246 bits (629), Expect = 1.120e-74 Identity = 131/226 (57.96%), Postives = 170/226 (75.22%), Query Frame = 1 Query: 1 MPREIITVQVGQCGNQIGWKFWDLALREHGSRATAPVFDEAMSTFFRNVDPRTS--RDVVGERVGPGGERISALASLRARAVLVDTEEGVLSQVLGSRLGRELFDRSTQVVSDVSGAGNNWAHGYYEYGSRYTPMVMEQVRRALEAAESPQAFLLLHSLGGGTGSGLGTSVLHGLTESFPELDRITCSVFPSDDDDVITSPYNAALATRVLADDADAVLPIENARL 672 MPRE+IT+QVGQCGNQIG +FW+LALREH + TA +FDEAMS+FFRNVD R++ RD+ P G+ + +++L+ARAVLVD EEGV++++ RLG LFD + Q+++DVSG+GNNWAHG++ YG +Y ++E +RR +EA ES Q+FLLL SLGGGTGSGLG +L L + FPE R SVFPS+DDDVITSPYNA L+ L + ADAV P+EN L Sbjct: 1 MPRELITIQVGQCGNQIGHRFWELALREHAANNTAGLFDEAMSSFFRNVDCRSNPPRDI------PIGDGSAPISNLKARAVLVDMEEGVVNEMRKGRLGG-LFD-AQQLLTDVSGSGNNWAHGHHLYGPQYRDNLLESIRRPVEACESLQSFLLLQSLGGGTGSGLGCYILSLLEDEFPEAYRFATSVFPSEDDDVITSPYNALLSLAELTEHADAVFPLENQAL 218
BLAST of mRNA_M-pyrifera_M_contig71273.16996.1 vs. uniprot
Match: A0A7S0MF89_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MF89_9CRYP) HSP 1 Score: 236 bits (601), Expect = 1.150e-74 Identity = 126/227 (55.51%), Postives = 159/227 (70.04%), Query Frame = 1 Query: 1 MPREIITVQVGQCGNQIGWKFWDLALREHGSRATAPVFDEAMSTFFRNVDPRTSRDVVGERVGPGGERISALASLRARAVLVDTEEGVLSQVLGSRLGRELFDRSTQVVSDVSGAGNNWAHGYYEYGSRYTPMVMEQVRRALEAAESPQAFLLLHSLGGGTGSGLGTSVLHGLTESFPELDRITCSVFPSDDDDVITSPYNAALATRVLADDADAVLPIENARLQTI 681 MPRE++ VQVGQCGNQIG +FWD+AL+EH + AP +DE +S+FFRNVD R + +G S ++SL+ARAVL+DTE GVL+ +LG LG ELFD S ++SD GAGNNWA G+ EYG +Y +++QV R E +S Q+F LLHSLGGGTGSGLGT L L + F ++ R T SVFPS+DDDV+TSPYN+ LA L+ AD VLPIEN L I Sbjct: 1 MPRELVIVQVGQCGNQIGCRFWDIALQEHAAYCKAPTYDEPLSSFFRNVDARYPQASNSLPIG------SPISSLKARAVLIDTETGVLNSLLGGPLG-ELFD-SRHLISDQYGAGNNWAQGHLEYGPKYADDILDQVSRTAEQCDSLQSFFLLHSLGGGTGSGLGTYTLGLLDDHFHDVYRFTTSVFPSEDDDVVTSPYNSVLALEQLSLHADCVLPIENQALADI 219
BLAST of mRNA_M-pyrifera_M_contig71273.16996.1 vs. uniprot
Match: A0A2K3DX56_CHLRE (Uncharacterized protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DX56_CHLRE) HSP 1 Score: 243 bits (621), Expect = 1.630e-74 Identity = 127/228 (55.70%), Postives = 166/228 (72.81%), Query Frame = 1 Query: 1 MPREIITVQVGQCGNQIGWKFWDLALREHGSRATAPVFDEAMSTFFRNVDPRTSRDVVGERVGPGGERISALASLRARAVLVDTEEGVLSQVLGSRLGRELFDRSTQVVSDVSGAGNNWAHGYYEYGSRYTPMVMEQVRRALEAAESPQAFLLLHSLGGGTGSGLGTSVLHGLTESFPELDRITCSVFPSDDDDVITSPYNAALATRVLADDADAVLPIENARLQTIV 684 MPRE++T+QVGQCGNQ+G +FW+LALREH + T V+DEA+S+FFRNVD R V R P GE A+ +L+AR+V+VD E GV++++L LG L R Q+VSDVSGAGNNWAHG++EYG RY +++++R E +S Q+F++LHSLGGGTGSG+GT ++ L + FP + R T SVFPS+DDDV+TSPYNA LA L + AD VLPIEN L IV Sbjct: 1 MPRELVTIQVGQCGNQVGCRFWELALREHAAYNTKGVYDEALSSFFRNVDTR----VEPPRNLPVGEGRGAIRTLKARSVIVDMECGVINEMLKGPLGEVLDTR--QLVSDVSGAGNNWAHGHHEYGPRYHDAILDKIRLTAEDCDSLQSFMVLHSLGGGTGSGVGTYIVRMLADEFPGVFRFTGSVFPSEDDDVVTSPYNAMLALGQLVEHADCVLPIENQALIDIV 222
BLAST of mRNA_M-pyrifera_M_contig71273.16996.1 vs. uniprot
Match: A0A7R9UCQ4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCQ4_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.690e-74 Identity = 134/235 (57.02%), Postives = 169/235 (71.91%), Query Frame = 1 Query: 1 MPREIITVQVGQCGNQIGWKFWDLALREHGSRATAPVFDEAMSTFFRNVDPRTSRDVVGERVGPGGERI--SALASLRARAVLVDTEEGVLSQVLGSRLGRELFDRSTQVVSDVSGAGNNWAHGYYEYGSRYTPMVMEQVRRALEAAESPQAFLLLHSLGGGTGSGLGTSVLHGLTESFPELDRITCSVFPSDDDDVITSPYNAALATRVLADDADAVLPIENARLQTIVEGSGS 699 MPRE++T+QVGQCGNQ+G FW L EH +R +A ++DEA+S+FFRNVD R P E S L+SLRARA+L+D EEG +S++L S +G ELFD S Q ++DVSG+GNN+AHG+ YG RY ++EQ RRALE +SPQ+FLLLHSLGGGTGSGLG+ VL L ++FPE+ R+ C V PS +DDV+TSPYNA L R L + ADAVLP+EN L IVE GS Sbjct: 12 MPRELVTIQVGQCGNQVGKAFWLRVLAEH-ARQSAGIYDEALSSFFRNVDARFE---------PASELPLGSPLSSLRARALLIDMEEGPVSEMLRSDIG-ELFD-SAQSITDVSGSGNNFAHGFGYYGPRYGAEILEQARRALEECDSPQSFLLLHSLGGGTGSGLGSFVLGALEDAFPEIYRLDCCVMPSAEDDVVTSPYNALLGLRELGEHADAVLPLENGALAGIVERYGS 234
BLAST of mRNA_M-pyrifera_M_contig71273.16996.1 vs. uniprot
Match: A0A835YXS9_9STRA (Tubulin/FtsZ family, GTPase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXS9_9STRA) HSP 1 Score: 243 bits (619), Expect = 3.230e-74 Identity = 132/234 (56.41%), Postives = 166/234 (70.94%), Query Frame = 1 Query: 1 MPREIITVQVGQCGNQIGWKFWDLALREH-------GSRATAPVFDEAMSTFFRNVDPRTSRDVVGERVGPGGERISALASLRARAVLVDTEEGVLSQVLGSRLGRELFDRSTQVVSDVSGAGNNWAHGYYEYGSRYTPMVMEQVRRALEAAESPQAFLLLHSLGGGTGSGLGTSVLHGLTESFPELDRITCSVFPSDDDDVITSPYNAALATRVLADDADAVLPIENARLQTI 681 MPRE+IT+QVGQCGNQIG FW AL EH G RAT+ +D+ MS+FFRNVDPR+ RD+ G G + LA+L+ARAVLVD E+GV+++ L LG ELFD+ Q+V+DV GAGNNWAHGY YG +Y ++E VR A E ES Q+F L+HS+GGGTGSGLGT +L L +SFPE+ R+ +VFPS DDDV+TSPYNA LA R L D AD +P++N L +I Sbjct: 1 MPRELITIQVGQCGNQIGRCFWQQALAEHASAAAALGGRATSATYDDCMSSFFRNVDPRSGRDL-----GVG----TPLAALKARAVLVDMEDGVVNETLNGPLG-ELFDQR-QLVTDVYGAGNNWAHGYAAYGPQYGDALLEAVRAAAEKCESLQSFFLMHSMGGGTGSGLGTYLLSLLEDSFPEVLRMVTAVFPSQDDDVVTSPYNAVLALRHLTDHADCAMPVDNQSLLSI 223
BLAST of mRNA_M-pyrifera_M_contig71273.16996.1 vs. uniprot
Match: A0A250WWZ4_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WWZ4_9CHLO) HSP 1 Score: 242 bits (618), Expect = 3.360e-74 Identity = 129/237 (54.43%), Postives = 170/237 (71.73%), Query Frame = 1 Query: 1 MPREIITVQVGQCGNQIGWKFWDLALREHGSRATAPVFDEAMSTFFRNVDPRTSRDVVGERVGPGGERISALASLRARAVLVDTEEGVLSQVLGSRLGRELFDRSTQVVSDVSGAGNNWAHGYYEYGSRYTPMVMEQVRRALEAAESPQAFLLLHSLGGGTGSGLGTSVLHGLTESFPELDRITCSVFPSDDDDVITSPYNAALATRVLADDADAVLPIENARLQTIVEGSGSGRSG 711 MPRE++T+Q GQCGNQIG +FW+LALREH + + VFDEA+S+FFRNVD R V R P G+ + +L+AR+V+VD E GV++++L LG ++ D + Q++SDVSGAGNNWAHG + YG +Y +ME++R +EA ES Q+FLLLHSLGGGTGSG+GT +L L + +P++ R T SVFPS+DDDV+TSPYNA L+ L + AD VLPIEN L IV SG G Sbjct: 1 MPRELVTIQCGQCGNQIGCRFWELALREHAAYNSKGVFDEALSSFFRNVDAR----YVPPRNLPVGDGTGIIQTLKARSVIVDMECGVINEMLKGPLG-DVLD-TQQLISDVSGAGNNWAHGNHVYGPQYRDQMMEKIRCTVEACESLQSFLLLHSLGGGTGSGVGTYILELLADQYPDVFRFTASVFPSEDDDVVTSPYNALLSLSKLVEFADCVLPIENQALAEIVGRVDSGARG 231 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig71273.16996.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig71273.16996.1 >prot_M-pyrifera_M_contig71273.16996.1 ID=prot_M-pyrifera_M_contig71273.16996.1|Name=mRNA_M-pyrifera_M_contig71273.16996.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=254bp MPREIITVQVGQCGNQIGWKFWDLALREHGSRATAPVFDEAMSTFFRNVDback to top mRNA from alignment at M-pyrifera_M_contig71273:189..1109+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig71273.16996.1 ID=mRNA_M-pyrifera_M_contig71273.16996.1|Name=mRNA_M-pyrifera_M_contig71273.16996.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=921bp|location=Sequence derived from alignment at M-pyrifera_M_contig71273:189..1109+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig71273:189..1109+ >mRNA_M-pyrifera_M_contig71273.16996.1 ID=mRNA_M-pyrifera_M_contig71273.16996.1|Name=mRNA_M-pyrifera_M_contig71273.16996.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1524bp|location=Sequence derived from alignment at M-pyrifera_M_contig71273:189..1109+ (Macrocystis pyrifera P11B4 male)back to top |