mRNA_M-pyrifera_M_contig70913.16927.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig70913.16927.1
Unique NamemRNA_M-pyrifera_M_contig70913.16927.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig70913.16927.1 vs. uniprot
Match: A0A0P7TG61_SCLFO (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A0P7TG61_SCLFO)

HSP 1 Score: 94.0 bits (232), Expect = 3.050e-20
Identity = 69/197 (35.03%), Postives = 100/197 (50.76%), Query Frame = 1
Query:    1 KAKNKRPAWDLKGRLQDLESSQGAMKDRIVSAEDTVETLRKQLAEKQEVVSSLSGAKESLQGDISVYQAQVGEAQAAREKLMKMMDTMKEEXXXXXXXXXXXXXLLQIQHDNLEIQLREVSENLARMKGQSAQQALKISGLEAKIKHTESQLNDANELCDERKANIDNLEMERRKLHNAILELKGNIRVFCRVRPML 591
            K  ++RPAWDLKGR+ D+E+   A ++R+ +A    E L+  +A  QE    L     +L+  +S Y AQV +   ARE+L        EE              L ++HD L    + +   L  ++ Q A Q   +S  +A +   +  + +  E    +   +   EMERRKLHN I ELKGNIRVFCRVRP+L
Sbjct:   10 KTGSRRPAWDLKGRVSDMENKVQAYQNRVKTATQENEDLKDLVATAQERERKLDEEVRTLKQQLSQYVAQVADLSRAREEL--------EEVTSEKNSLTKKLNTLYVEHDMLLSLKQGLESELQNVQTQLAVQGSILSRCQASLNEAQDMVRNLEEKVSHQSEELYRGEMERRKLHNTIQELKGNIRVFCRVRPLL 198          
BLAST of mRNA_M-pyrifera_M_contig70913.16927.1 vs. uniprot
Match: A0A8C9RFD2_SCLFO (Kinesin-like protein n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9RFD2_SCLFO)

HSP 1 Score: 94.0 bits (232), Expect = 7.340e-19
Identity = 69/197 (35.03%), Postives = 100/197 (50.76%), Query Frame = 1
Query:    1 KAKNKRPAWDLKGRLQDLESSQGAMKDRIVSAEDTVETLRKQLAEKQEVVSSLSGAKESLQGDISVYQAQVGEAQAAREKLMKMMDTMKEEXXXXXXXXXXXXXLLQIQHDNLEIQLREVSENLARMKGQSAQQALKISGLEAKIKHTESQLNDANELCDERKANIDNLEMERRKLHNAILELKGNIRVFCRVRPML 591
            K  ++RPAWDLKGR+ D+E+   A ++R+ +A    E L+  +A  QE    L     +L+  +S Y AQV +   ARE+L        EE              L ++HD L    + +   L  ++ Q A Q   +S  +A +   +  + +  E    +   +   EMERRKLHN I ELKGNIRVFCRVRP+L
Sbjct:   99 KTGSRRPAWDLKGRVSDMENKVQAYQNRVKTATQENEDLKDLVATAQERERKLDEEVHTLKQQLSQYVAQVADLSRAREEL--------EEVTSEKNSLTKKLNTLYVEHDMLLSLKQGLESELQNVQTQLAVQGSILSRCQASLNEAQDMVRNLEEKVSHQSEELYRGEMERRKLHNTIQELKGNIRVFCRVRPLL 287          
BLAST of mRNA_M-pyrifera_M_contig70913.16927.1 vs. uniprot
Match: A0A0L0SRK1_ALLM3 (Kinesin-like protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SRK1_ALLM3)

HSP 1 Score: 81.6 bits (200), Expect = 1.380e-14
Identity = 71/220 (32.27%), Postives = 104/220 (47.27%), Query Frame = 1
Query:    7 KNKRPAWDLKGRLQDLESSQGAMKDRIVSAEDTVETLRKQLAEKQEVVSSLSGAKESLQGDISVYQAQ----VGEAQAAREKLMKMMDTMKEEXXXXXXXXXXXXXLLQIQHDNLEI-------QLREVSENLARMKGQSAQQALKISGLEAKIKHTESQLNDAN-ELC------DERKANIDNLEM-------ERRKLHNAILELKGNIRVFCRVRPML 591
            K KR  WD KGRL+DLE++   ++D +   ++T   L   L E  + +  L   K SL+  +     +      E    R +L    D  +++              L+I  D+L+        +L   +EN+A ++   +   +  + LEAK++    QL+D   EL       D R A +D LE        ERRKLHN I ELKGNIRVFCRVRP+L
Sbjct:   65 KTKRATWDTKGRLEDLEATFKNVQDTMAGYKETAANLADTLKESNKRIRELESFKTSLEDTVHAKTQENDGMAHELAQLRHELAMAQDRHQQQLQRALAAHQAEVMQLKIDRDDLDRRNALLKHELDHANENVANLRSALSTSTVASTALEAKVRTLTMQLDDTKAELTSTXXXXDVRAARVDELEAAVRAAETERRKLHNTIQELKGNIRVFCRVRPVL 284          
BLAST of mRNA_M-pyrifera_M_contig70913.16927.1 vs. uniprot
Match: A0A671FL01_RHIFE (Kinesin-like protein n=26 Tax=Laurasiatheria TaxID=314145 RepID=A0A671FL01_RHIFE)

HSP 1 Score: 81.6 bits (200), Expect = 1.390e-14
Identity = 67/202 (33.17%), Postives = 107/202 (52.97%), Query Frame = 1
Query:    1 KAKNKRPAWDLKGRLQDLESSQGAMKDRIVSAEDTVETLRKQLAEKQEVVSSLSGAKESLQGDISVYQAQVGEAQAAREKLMKMMDTMKEEXXXXXXXXXXXXXLLQIQHDNLEIQLREVSENLARMKGQ-----SAQQALKISGLEAKIKHTESQLNDANELCDERKANIDNLEMERRKLHNAILELKGNIRVFCRVRPML 591
            K  +KRPAWDLKG+L DL +     ++R  + +   + LR QL E Q+  ++L   + +L+G++++ +AQ  + Q     L   +  ++E              + ++Q + LE+Q  E    + R++ Q     +++ AL  S  E      E+    A+    ER   +  LEMERR+LHN + ELKGNIRVFCRVRP+L
Sbjct:  133 KKPSKRPAWDLKGQLCDLNAELKCCRERTQTLDQENQQLRDQLREAQQQATALGAERRTLEGELALKRAQAEQGQRELGNLSARVLELEE------WLGTQEGLVQELQKEQLELQ-EERRGLVIRLEEQERRXXASEAALSDSQAEVASLRRETAAQAAS--LAERGERLHGLEMERRRLHNQLQELKGNIRVFCRVRPVL 325          
BLAST of mRNA_M-pyrifera_M_contig70913.16927.1 vs. uniprot
Match: UPI0015A8F246 (kinesin-like protein KIFC1 n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015A8F246)

HSP 1 Score: 78.6 bits (192), Expect = 1.580e-13
Identity = 63/197 (31.98%), Postives = 101/197 (51.27%), Query Frame = 1
Query:   10 NKRPAWDLKGRLQDLESSQGAMKDRIVSAEDTVETLRKQLAEKQEVVSSLSGAKESLQGDISVYQAQVGEAQAAREKLMKMM---DTMKEEXXXXXXXXXXXXXLLQIQHDNLEIQLREVSENLARMKGQSAQQALKISGLEAKIKHTESQLNDANELCDERKANIDNLEMERRKLHNAILELKGNIRVFCRVRPML 591
            ++RPAWDLKG++ D+ES   A + R  +A    + LR+ +A  QE  + +    +  +  +SV + ++G  +  RE+L +     D ++EE              L  +H  L    + + E L  M+ Q + Q+  +S  +  +K  +  +    E    +   I   EM+RR+LHN I ELKGNIRVFCRVRP+L
Sbjct:  108 SRRPAWDLKGKVSDMESKVQAYQARAKTATQENQDLRECVARAQEREAQMEEEIQGFRLQLSVSERELGALRKVREELKQATQERDVLQEELGQ-----------LDRKHTALLGVRQALEEELLNMQTQLSVQSSTLSRCQVCLKEAQETVQALQEKVAAQSEEIHAGEMQRRQLHNTIQELKGNIRVFCRVRPLL 293          
BLAST of mRNA_M-pyrifera_M_contig70913.16927.1 vs. uniprot
Match: UPI00148C2487 (kinesin-like protein KIFC1 n=2 Tax=Pleuronectoidei TaxID=30942 RepID=UPI00148C2487)

HSP 1 Score: 75.9 bits (185), Expect = 1.350e-12
Identity = 59/196 (30.10%), Postives = 99/196 (50.51%), Query Frame = 1
Query:    4 AKNKRPAWDLKGRLQDLESSQGAMKDRIVSAEDTVETLRKQLAEKQEVVSSLSGAKESLQGDISVYQAQVGEAQAAREKLMKMMDTMKEEXXXXXXXXXXXXXLLQIQHDNLEIQLREVSENLARMKGQSAQQALKISGLEAKIKHTESQLNDANELCDERKANIDNLEMERRKLHNAILELKGNIRVFCRVRPML 591
            A NKR AWDLKG++ D+E      + +  S     E LR  + + +  V  +    E  +  IS Y+ ++      R++L + + + K               +++   D+ E +L+ +   L      S Q+   I  ++A ++ TE ++    E   +++ ++   EMERR+LHNAI ELKGNIRVFCRVRP++
Sbjct:  111 AANKRHAWDLKGKVSDMEGKIRNYQTKFKSVNQENEALRGSMTQSRTRVDVMEKELEKQRNQISEYEEELQALSGVRDEL-EQVSSDKSTLQKELSNLEGKYKVMETLRDSQETELQTLKMKL------SVQETTLIR-VQATLRDTEEEVRCLKETVAQQRDDLHAGEMERRRLHNAIQELKGNIRVFCRVRPLV 298          
BLAST of mRNA_M-pyrifera_M_contig70913.16927.1 vs. uniprot
Match: UPI00186521A7 (kinesin-like protein KIFC1 isoform X1 n=2 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI00186521A7)

HSP 1 Score: 75.5 bits (184), Expect = 1.830e-12
Identity = 58/194 (29.90%), Postives = 98/194 (50.52%), Query Frame = 1
Query:   10 NKRPAWDLKGRLQDLESSQGAMKDRIVSAEDTVETLRKQLAEKQEVVSSLSGAKESLQGDISVYQAQVGEAQAAREKLMKMMDTMKEEXXXXXXXXXXXXXLLQIQHDNLEIQLREVSENLARMKGQSAQQALKISGLEAKIKHTESQLNDANELCDERKANIDNLEMERRKLHNAILELKGNIRVFCRVRPML 591
            ++RPAWDLKG++ D+E+     ++R+ +A    + L++ +   +E    +     +LQ  +S ++ ++         L K+ D + E              L +    NLE++    SE L  ++ Q   Q   +S  +  ++ T+  +    E   ++   + + EMERRKLHN I ELKGNIRVFCRVRP+L
Sbjct:  114 SRRPAWDLKGKVSDMETKVQVYQNRMKTANQENQELKEAVVRGKEREEQIEEEMHALQQKLSQHERELA-------ALCKVRDELDEVTRDRATLQRKYTTLNEEHRVNLELKQTLESE-LHNVQTQLTVQGSVLSRCQTSLRETQETVRALEEKVAQQAEELHHGEMERRKLHNTIQELKGNIRVFCRVRPLL 299          
BLAST of mRNA_M-pyrifera_M_contig70913.16927.1 vs. uniprot
Match: A0A3B3Q8N5_9TELE (Kinesin-like protein n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3Q8N5_9TELE)

HSP 1 Score: 74.7 bits (182), Expect = 3.370e-12
Identity = 58/197 (29.44%), Postives = 97/197 (49.24%), Query Frame = 1
Query:    1 KAKNKRPAWDLKGRLQDLESSQGAMKDRIVSAEDTVETLRKQLAEKQEVVSSLSGAKESLQGDISVYQAQVGEAQAAREKLMKMMDTMKEEXXXXXXXXXXXXXLLQIQHDNLEIQLREVSENLARMKGQSAQQALKISGLEAKIKHTESQLNDANELCDERKANIDNLEMERRKLHNAILELKGNIRVFCRVRPML 591
            K   +RPAWDLKG++ D+E+     ++R+ S     + L+  +A  QE    +    ++L+  +S   A++ +    +++L K+ +                  LL ++  +LE Q++ +         Q   Q   +S  ++ +K  +  + +  E    +   I   EMERRKLHN I ELKGNIRVFCRVRP+L
Sbjct:  101 KTGTRRPAWDLKGKVTDMENKVQVYQNRVKSTAQENKDLKDSMARGQERQQLMDEEIQTLKYQLSQAVAELADLSEVKDQLDKVTEDRNNLREKFTTLSQEHGVLLSLRQ-SLESQIQNIQT-------QMTVQGSVLSCCQSDLKEAQEMVRNLEEKVAHQSDEIYRGEMERRKLHNTIQELKGNIRVFCRVRPLL 289          
BLAST of mRNA_M-pyrifera_M_contig70913.16927.1 vs. uniprot
Match: A0A8C2X283_CYCLU (Kinesin-like protein n=3 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C2X283_CYCLU)

HSP 1 Score: 74.3 bits (181), Expect = 4.570e-12
Identity = 59/193 (30.57%), Postives = 100/193 (51.81%), Query Frame = 1
Query:   13 KRPAWDLKGRLQDLESSQGAMKDRIVSAEDTVETLRKQLAEKQEVVSSLSGAKESLQGDISVYQAQVGEAQAAREKLMKMMDTMKEEXXXXXXXXXXXXXLLQIQHDNLEIQLREVSENLARMKGQSAQQALKISGLEAKIKHTESQLNDANELCDERKANIDNLEMERRKLHNAILELKGNIRVFCRVRPML 591
            KR AWDLKG+  D+E      + ++ +     E L++ + + Q  V  +       +  IS Y+A++      R++L +M+ + K      XXXXX    +++   D+ EI+L+ + + LAR++     Q  ++  L+  +   + +L+                EM+RR+LHN I ELKGNIRVFCRVRP++
Sbjct:  117 KRQAWDLKGKFSDMEGKVRNYQTKVKATNQENEALKETMVQSQSRVVEMEKTLARQKSQISEYEAELQALSGVRDEL-EMVSSDKSTLEKEXXXXXSKHKVMETVRDSQEIELQTLKKTLARLQVTVRDQEEEVCSLKDTVVQQKDELHAG--------------EMDRRRLHNDIQELKGNIRVFCRVRPLV 294          
BLAST of mRNA_M-pyrifera_M_contig70913.16927.1 vs. uniprot
Match: A0A2T7PJZ5_POMCA (Kinesin-like protein n=3 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PJZ5_POMCA)

HSP 1 Score: 73.9 bits (180), Expect = 6.350e-12
Identity = 72/221 (32.58%), Postives = 97/221 (43.89%), Query Frame = 1
Query:   13 KRPAWDLKGRLQDLESSQGAMKDRIVSAEDTVETLRKQLAEKQEVVSSLSGAKESLQGDIS-------VYQAQVGEAQAAREKLMKMMDTMKEEXXXXXXXXXXXXXLLQIQHDNLEIQLREVSENLARMKGQSAQ----QALKISGLEA-----------------KIKHTESQLNDANELCDERKANIDNLEMERRKLHNAILELKGNIRVFCRVRPML 591
            KRPAWDLKGRLQD+ES        +   E +  +L+ QL    + ++ L   KE L GD++       V   +  E Q       + M T   +              L+ Q+  LE +L      ++R+K   AQ    QAL  + LE                  +I+    +L   +   DE    I   E  RRKLHN I ELKGNIRVFCRVRP+L
Sbjct:  131 KRPAWDLKGRLQDMESV-------LSQREASASSLQSQLESYNQRIAHLEQQKEQLSGDVARRDELSQVVSRENAELQRQLRDCQEEMATACRKLQREIEDLTFSKSCLERQYATLEGELNVARTEVSRLKLSIAQLTSSQALVNAELETTKLSLDQAFRDIHARDEEIRQLRLELAGRDATIDENNQKIREHETMRRKLHNTIQELKGNIRVFCRVRPLL 344          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70913.16927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0P7TG61_SCLFO3.050e-2035.03Kinesin motor domain-containing protein (Fragment)... [more]
A0A8C9RFD2_SCLFO7.340e-1935.03Kinesin-like protein n=1 Tax=Scleropages formosus ... [more]
A0A0L0SRK1_ALLM31.380e-1432.27Kinesin-like protein n=2 Tax=Allomyces macrogynus ... [more]
A0A671FL01_RHIFE1.390e-1433.17Kinesin-like protein n=26 Tax=Laurasiatheria TaxID... [more]
UPI0015A8F2461.580e-1331.98kinesin-like protein KIFC1 n=1 Tax=Anguilla anguil... [more]
UPI00148C24871.350e-1230.10kinesin-like protein KIFC1 n=2 Tax=Pleuronectoidei... [more]
UPI00186521A71.830e-1229.90kinesin-like protein KIFC1 isoform X1 n=2 Tax=Mega... [more]
A0A3B3Q8N5_9TELE3.370e-1229.44Kinesin-like protein n=2 Tax=Paramormyrops kingsle... [more]
A0A8C2X283_CYCLU4.570e-1230.57Kinesin-like protein n=3 Tax=Cyclopterus lumpus Ta... [more]
A0A2T7PJZ5_POMCA6.350e-1232.58Kinesin-like protein n=3 Tax=Pomacea canaliculata ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70913contigM-pyrifera_M_contig70913:330..1132 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score89.0
Seed ortholog evalue2.7e-15
Seed eggNOG ortholog28583.AMAG_10767T0
Preferred nameKAR3
KEGG koko:K10405,ko:K17945
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000022,GO:0000070,GO:0000166,GO:0000226,GO:0000228,GO:0000235,GO:0000278,GO:0000280,GO:0000741,GO:0000742,GO:0000743,GO:0000746,GO:0000747,GO:0000775,GO:0000776,GO:0000777,GO:0000778,GO:0000779,GO:0000780,GO:0000793,GO:0000794,GO:0000819,GO:0000922,GO:0001578,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005815,GO:0005816,GO:0005818,GO:0005819,GO:0005856,GO:0005871,GO:0005872,GO:0005874,GO:0005875,GO:0005876,GO:0005881,GO:0005938,GO:0006810,GO:0006886,GO:0006928,GO:0006996,GO:0006997,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007062,GO:0007064,GO:0007080,GO:0007097,GO:0007163,GO:0007346,GO:0008017,GO:0008092,GO:0008104,GO:0008144,GO:0008150,GO:0008569,GO:0009987,GO:0010564,GO:0010970,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019953,GO:0022402,GO:0022414,GO:0022607,GO:0030473,GO:0030554,GO:0030705,GO:0030863,GO:0030951,GO:0030952,GO:0030981,GO:0031122,GO:0031224,GO:0031534,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034453,GO:0034613,GO:0034631,GO:0035371,GO:0035639,GO:0036094,GO:0036449,GO:0042623,GO:0042886,GO:0043015,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044380,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044454,GO:0044464,GO:0044703,GO:0044732,GO:0044764,GO:0045184,GO:0046907,GO:0046982,GO:0046983,GO:0048284,GO:0048285,GO:0050000,GO:0050789,GO:0050794,GO:0051012,GO:0051128,GO:0051179,GO:0051225,GO:0051231,GO:0051234,GO:0051276,GO:0051303,GO:0051310,GO:0051321,GO:0051493,GO:0051640,GO:0051641,GO:0051647,GO:0051649,GO:0051656,GO:0051704,GO:0051726,GO:0055028,GO:0060236,GO:0065007,GO:0070013,GO:0070507,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0071988,GO:0071989,GO:0072384,GO:0072393,GO:0072594,GO:0072686,GO:0072698,GO:0090224,GO:0090307,GO:0090561,GO:0097159,GO:0097367,GO:0097435,GO:0098687,GO:0098813,GO:0098840,GO:0099080,GO:0099081,GO:0099111,GO:0099118,GO:0099512,GO:0099513,GO:0099568,GO:0140014,GO:1901265,GO:1901363,GO:1902850,GO:1903047,GO:1905185,GO:1905508,GO:1990752,GO:1990810,GO:1990811,GO:1990852,GO:1990939,GO:1990942
EggNOG free text desc.Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
EggNOG OGs38D7J@33154,3NX16@4751,COG5059@1,KOG0239@2759
COG Functional cat.Z
Best tax levelFungi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029,ko03036,ko04131,ko04812
Exons2
Model size591
Cds size591
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816603.3915143-CDS-M-pyrifera_M_contig70913:329..8391622816603.3915143-CDS-M-pyrifera_M_contig70913:329..839Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70913 330..839 +
1692278071.9250576-CDS-M-pyrifera_M_contig70913:329..8391692278071.9250576-CDS-M-pyrifera_M_contig70913:329..839Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70913 330..839 +
1622816603.4089546-CDS-M-pyrifera_M_contig70913:1051..11321622816603.4089546-CDS-M-pyrifera_M_contig70913:1051..1132Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70913 1052..1132 +
1692278071.9357176-CDS-M-pyrifera_M_contig70913:1051..11321692278071.9357176-CDS-M-pyrifera_M_contig70913:1051..1132Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70913 1052..1132 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70913.16927.1prot_M-pyrifera_M_contig70913.16927.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig70913 330..1132 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig70913.16927.1

>prot_M-pyrifera_M_contig70913.16927.1 ID=prot_M-pyrifera_M_contig70913.16927.1|Name=mRNA_M-pyrifera_M_contig70913.16927.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=197bp
KAKNKRPAWDLKGRLQDLESSQGAMKDRIVSAEDTVETLRKQLAEKQEVV
SSLSGAKESLQGDISVYQAQVGEAQAAREKLMKMMDTMKEEHQQQLSSEE
QRRRLLQIQHDNLEIQLREVSENLARMKGQSAQQALKISGLEAKIKHTES
QLNDANELCDERKANIDNLEMERRKLHNAILELKGNIRVFCRVRPML
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mRNA from alignment at M-pyrifera_M_contig70913:330..1132+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig70913.16927.1 ID=mRNA_M-pyrifera_M_contig70913.16927.1|Name=mRNA_M-pyrifera_M_contig70913.16927.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=803bp|location=Sequence derived from alignment at M-pyrifera_M_contig70913:330..1132+ (Macrocystis pyrifera P11B4 male)
AAGGCCAAGAACAAGCGGCCCGCATGGGACCTGAAGGGCCGCCTCCAGGA CCTGGAGAGCTCGCAAGGAGCGATGAAGGACAGGATCGTGTCGGCAGAGG ACACGGTGGAGACGCTTCGCAAGCAGCTCGCCGAGAAGCAAGAGGTGGTC AGCTCTCTGTCAGGTGCCAAGGAGAGCCTCCAGGGCGACATCAGCGTCTA CCAGGCCCAGGTGGGCGAGGCCCAGGCTGCACGGGAGAAGCTCATGAAGA TGATGGACACAATGAAGGAGGAGCACCAGCAACAGCTCTCCTCCGAGGAG CAGCGCCGTCGCCTCCTCCAAATCCAGCACGACAACCTGGAGATCCAGCT CCGCGAGGTCAGCGAGAACCTCGCCCGCATGAAGGGCCAGAGCGCCCAGC AGGCGCTCAAGATCAGCGGCCTGGAGGCAAAGATCAAGCACACCGAGAGC CAGCTCAACGACGCCAACGAGCTCTGTGACGAGCGCAAGGCCAACATCGA TAACCTGGAGGTGAGTCTCTCCTTACGCGCTGCGGCCAGCCGGTCAGAGG GAGCGAGCGGCATGAGTAGGAGACTAGCGAAGCGGGGAGGGGTACTTCTT GGGCGGGCGGGCGCAAGCTGCTTGGCCATGCGGCGGAGGACGTGTGCTGA CGGAGCCAGGCTACTGTGGAGGAGCTCCGAGGCACGATCGACGACCTGGA GGAGCGTGGCCGAGCCGACGAGATGGAGAGGCGCAAGCTGCACAACGCCA TCCTCGAGCTGAAGGGCAACATCCGCGTCTTCTGCCGGGTGCGCCCCATG CTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig70913:330..1132+

>mRNA_M-pyrifera_M_contig70913.16927.1 ID=mRNA_M-pyrifera_M_contig70913.16927.1|Name=mRNA_M-pyrifera_M_contig70913.16927.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1182bp|location=Sequence derived from alignment at M-pyrifera_M_contig70913:330..1132+ (Macrocystis pyrifera P11B4 male)
AAGGCCAAGAACAAGCGGCCCGCATGGGACCTGAAGGGCCGCCTCCAGGA
CCTGGAGAGCTCGCAAGGAGCGATGAAGGACAGGATCGTGTCGGCAGAGG
ACACGGTGGAGACGCTTCGCAAGCAGCTCGCCGAGAAGCAAGAGGTGGTC
AGCTCTCTGTCAGGTGCCAAGGAGAGCCTCCAGGGCGACATCAGCGTCTA
CCAGGCCCAGGTGGGCGAGGCCCAGGCTGCACGGGAGAAGCTCATGAAGA
TGATGGACACAATGAAGGAGGAGCACCAGCAACAGCTCTCCTCCGAGGAG
CAGCGCCGTCGCCTCCTCCAAATCCAGCACGACAACCTGGAGATCCAGCT
CCGCGAGGTCAGCGAGAACCTCGCCCGCATGAAGGGCCAGAGCGCCCAGC
AGGCGCTCAAGATCAGCGGCCTGGAGGCAAAGATCAAGCACACCGAGAGC
CAGCTCAACGACGCCAACGAGCTCTGTGACGAGCGCAAGGCCAACATCGA
TAACCTGGAGAAGGCCAAGAACAAGCGGCCCGCATGGGACCTGAAGGGCC
GCCTCCAGGACCTGGAGAGCTCGCAAGGAGCGATGAAGGACAGGATCGTG
TCGGCAGAGGACACGGTGGAGACGCTTCGCAAGCAGCTCGCCGAGAAGCA
AGAGGTGGTCAGCTCTCTGTCAGGTGCCAAGGAGAGCCTCCAGGGCGACA
TCAGCGTCTACCAGGCCCAGGTGGGCGAGGCCCAGGCTGCACGGGAGAAG
CTCATGAAGATGATGGACACAATGAAGGAGGAGCACCAGCAACAGCTCTC
CTCCGAGGAGCAGCGCCGTCGCCTCCTCCAAATCCAGCACGACAACCTGG
AGATCCAGCTCCGCGAGGTCAGCGAGAACCTCGCCCGCATGAAGGGCCAG
AGCGCCCAGCAGGCGCTCAAGATCAGCGGCCTGGAGGCAAAGATCAAGCA
CACCGAGAGCCAGCTCAACGACGCCAACGAGCTCTGTGACGAGCGCAAGG
CCAACATCGATAACCTGGAGATGGAGAGGCGCAAGCTGCACAACGCCATC
CTCGAGCTGAAGGGCAACATCCGCGTCTTCTGCCGGGTGCGCCCCATGCT
CATGGAGAGGCGCAAGCTGCACAACGCCATCCTCGAGCTGAAGGGCAACA
TCCGCGTCTTCTGCCGGGTGCGCCCCATGCTC
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