mRNA_M-pyrifera_M_contig709.16921.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig709.16921.1 vs. uniprot
Match: D7FQ17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ17_ECTSI) HSP 1 Score: 387 bits (994), Expect = 5.060e-106 Identity = 513/1491 (34.41%), Postives = 659/1491 (44.20%), Query Frame = 1
Query: 1 MLKSLLLSALSACLAVWATLQYQQRVDPRPS-QHQXXXXXXXXXXXXXXXHSSLT----PASIDVAQALGLGRVLLARGEPEESALAFRVAXXXXXXXXXXXXXQDHAEAKHGLGLALRAAGRPEEALEACQEAERLDAELAVASACVGALLTESEDIVGALEALRSAAKKLENAKTMNRV------SAEGIHGRLGAALLAAGEVDEAITALTRALEGMALDSRDHHAAYNLGVAWQSKGETEKSIAAYAQAVELAPTLAPPRVNLGAQLLQSGRLPEAESVLLTAVKLGNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGG-GRSSLTHIAKIHQELGHPREALQASRRAMKEDGDPLDTSLPLLAGLILETLGDLEEAAEHFAAVTQIDADDLEATMHLGSCLQRLGRHHEALDA-----FLKASRLEPNNPDIYELL-LSAVGEAKTATGIGNPDVGDDRGGDQDPGGGAGAVGAGVFEEAKGEG------AAPAVFGAEH-----------GAGQGDAGGVDGSSSSVVEPPEHGIKEARPAGSYSTLGVRGESVDHDQHIGADAAASLAGIETQKVVDTDVGGASSPDVDAQSGSAGSVSTKGFPEVAGSSLREATAAMRKRSESISHNDAADTPARGFFVSRERHGQDDSGDVTGADGTPARVEGGGGGVEFTVTDPNAEGATRDAIPAREGGNPSADRSTDYSGGAHEHAQPGVATDNSSPEEIDANRPAMHGEASNGGRLVGEGAGAAIGGEVAGKGSLGANVEEVPAMSDKRAVLATMTDETPGNEDVGAGELVLPGGTAVLLGGDAVAENLATQAAGTLGGLEPDSGLEGIMKEKEEAG----GL--PIGTSAHSDVEEQPLGKTPAHVTDDRKGVSPVTTDGRDRVAVESVADLSGVVAEATAADALTADETNRREDGVTPAPSEGIPP---AEGLEEGVTKDSQALTTGIEDGSERLADGKNVASSAGAPETSREVDAIVGEKDESPPNDDVMA-SGDALKSPGE-TVHEQTVLSAGGGGGEVGKTEAVETSVAGPVDLESSSGADGSSMERVAQAPGRLSNQSAPVISPAAASEMPDE----LASPVPVSIGGQ--DGAKEEG-RGTAVVLEADTDSALSKQEGVSVGQTQGEKVEGGGADEHPVVAGSEAGAEVAGASSGDGADVXXXXXXXXXA--------------------------AAVAAVSEEEGRRARSKAKLGLARLKKGQTKKALLMFEKSASIDPGWWGGFYYTALAQDALGDAEAAARALTSALSVGAPTEASEVAELATLASKVLASLDGDQLAPVSGLLKTAMDASGLTFTAASASHESSASPREQPLPSRNAGGDSDGPAPGTA--------GEESGVGRAASMRDGAQGAGTGLEADLAHLGNKAEDSAPKLPV--GGKGATLENTKEGRWPFSRTGGPAGRSPPXXXXXXVSSSRAGETGTIPGSNRGAIPGR 4206
MLKS L SALSACLAV+ TL YQQ P P Q Q S T P ++D+AQALGLGRVLL+RGE EE+AL +RVA ++H EA+HGLGLAL A GRPEEAL AC+EAERLD +L A++C+GA+LT++ DI GAL ALR AA K E + + +A+ IHGRLGAALLAAGEVDEAI LTR D HAAYNLGVAWQ+KGETEK+I AY++A +LAPTLA PRVNLGAQLLQSGRL EAE+VLL+A + XXXXXXXXXXXXXXXXXXXXX G GR SL HIAK+H ELG +A +A RRAM E+GD LD S L+ G+ILE+LG++ EAA+HF+ V DA+++EATMHLG+C QRLG+HHE F +R +P + ++ + E+ TA I + D + FE A G PA GA G G+GDA D ++V P + + P ST G+ IGA + + G E + + V G+ L T E H A+GTPAR G T + PA+ D+ EE A R + IG VAG S+G ++ VL + T EL LP L L+ G E E G GL P+ E Q G+T +R+ SP D + AD N +DG+T E ++ EEG + I LA K+ S ++ +G + DDV A +G ++ + E +V E+ V + G G+TE E D DG V A + QS + P A + P L+ + S+G Q +G EE G + VE V A + E G +S D XXXXXX + VSE++ +RAR+KAKLG+A+L++GQ KKA+ +FEK+ASIDPGWWGGFYY ALA DALG+AEAAA AL SALSV APTE +EVA L+ L+SKVLA+LD + PV+ +LKTAMD SGLTF A +H+ P ++ L N+G + GT G +GV RA S ++ G +ADLA +A+ +A +P G +LEN P S GPAG + AGE T PG+ RG GR
Sbjct: 1 MLKSALTSALSACLAVFTTLLYQQWASPSPQLQQQHVPVATKIDREQELAGSPSTAPPWPTTVDLAQALGLGRVLLSRGEHEEAALVYRVAASAAAAVDSN---REHGEAQHGLGLALLATGRPEEALVACREAERLDPDLPTATSCIGAILTDAGDIAGALTALRHAADKTERGEVTAGLWRDAEGTADTIHGRLGAALLAAGEVDEAIEVLTRVELEARRAGGDPHAAYNLGVAWQTKGETEKAIVAYSRATDLAPTLAAPRVNLGAQLLQSGRLAEAEAVLLSAAERAXXXXXXXXXXXXXXXXXXXXXXXPEEALESYSRAVQSGAGRPSLVHIAKLHHELGQLEQAREACRRAMLEEGDSLDASPLLVTGVILESLGNVGEAADHFSKVVHQDAENVEATMHLGACQQRLGQHHEGPSGKPGRCFCLRNRKKPLPVNGFKTTYVYPAFESYTAPVIVKGGLRDVQ----------------PFERAICTGHWLVYRTPPAETGAAEMSQVSTALACFGGGEGDAEAKD---AAVANPADETLVSHDP----STDGI----------IGAQPSEGIGGGEDEGIAMV---------------------------VDGNGLATGTL--------------------------ETH----------AEGTPARSSG-----------------TESSAPAK-----------------------AAYLDSDIVEEELAARDDDN-----------------IGSTVAG--SIGNQGTADDIEQGEKHVLPSGT------------ELPLPNXXXXXXXXXXXXXXXXXXXXXXLATLKNKLGSSSKEGEGGERGPAVPGLEVPVVEEXXXXXERQANGRTVPATAAEREFASPPLNDANGEQTPDGAADAD-----------------NEEDDGLTGLVEENGSVDGGSDSFEEGDIATRDPVADVIHPAEPSLASAKSDTVSGDG----HDIATRLGNDNPVGTEDDVTAPAGGSVDAVSEKSVDEEAVHTLGEKAVVQGETEGAEARR----DSHEQEVVDG-----VGAADVTVDTQSEELDLPPTAVDTPGTSGGFLSEQITNSLGEQAKEGISEESIDGDNIXXXXXXXXXXXXXXXXXXXXXXXXXVEARAPATIEVGAADDETDEAMGGNSRSSGDASGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAEVPVSPIVVSEDDVKRARAKAKLGMAKLQQGQAKKAVSLFEKAASIDPGWWGGFYYAALAHDALGNAEAAAGALVSALSVPAPTEENEVAGLSALSSKVLAALDRGKQVPVAAVLKTAMDTSGLTFAVAPPTHDP---PSQRDL--GNSGNTNSVSPQGTGVGERTANMGGSAGVERAKSRDTASR---PGRDADLASQFGRADGAAGAIPSREGRARESLENIGR-ELPSSGQRGPAGGD-------DGARRAAGEDRTYPGTGRGTGSGR 1275
BLAST of mRNA_M-pyrifera_M_contig709.16921.1 vs. uniprot
Match: A0A6H5KCW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW1_9PHAE) HSP 1 Score: 327 bits (837), Expect = 4.950e-88 Identity = 477/1470 (32.45%), Postives = 648/1470 (44.08%), Query Frame = 1
Query: 688 GETEKSIAAYAQAVELAPTLAPPRVNLGAQLLQSGRLPEAESVLLTAVKLG-NDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGGRSSLTHIAKIHQELGHPREALQASRRAMKEDGDPLDTSLPLLAGLILETLGDLEEAAEHFAAVTQIDADDLEATMHLGSCLQRLGRHHEALDAFLKASRLEPNNPDIYELLLSAVGEAKTATGIGNPDVGDDRGGDQDPGGGAGAVGAGVFEEAKG-----EGAAPAVFGAEHGAG---QGDAGGVDGSSSSVVEPPEHGIKEARPAGSYSTLGVRGESVDHDQH------IGADAAASLAGIETQKVVDTDVGGASSPDVDAQSGSAGSVSTKGFPEVAGSSLREATAAMRKRSESISHNDAADTPARGFFVSRERHGQDDSGDVTGADGTPARVEGGGGGVEFTVTDPNAEGATRDAIPAREGGNPSADRSTDYSGGAHEHAQPGVATDNSSPEEIDANRPA--MHGEASNGGRLVGEGAGAAIGG-EVAGKGSLGANVEEVPAMSDKRA---------VLATMTDETPGNEDVG-------------AGELVLPG--------------GTAVLLGGDAVAENLAT-----------QAAGTLGGLEPDSGLEGIMKEKEEAGGLPIGTSAHSDVEEQPLGKTPAHVTDDRKGVSPVTTDGRDRVAVESVADLSGVVAEATAADALTADETNRREDGVTPAPSEGIPPAEGLEEG--VTKDSQA-------LTTGIEDGSERLADGKNVASSAGAPETSREVDAIVGEKDESPPNDDVMA--SGDALKSPGETVHEQTVLSAGGGGGEVGKTEAVETSVAGPVDLESSSGADGSSMERVAQAPGRLSNQSAPVISPAAASEMPDELASPVPVSIGGQ--DGAKEEG-------------------------RGTAVVLEA------DTDSALSKQEGVSVGQTQGEKVEGGGADE---HPVVAGSEAGAEVAGASSG--DGADVXXXXXXXXXAAAVAAVSEEEGRRARSKAKLGLARLKKGQTKKALLMFEKSASIDPGWWGGFYYTALAQDALGDAEAAARALTSALSVGAPTEASEVAELATLASKVLASLDGDQLAPVSGLLKTAMDASGLTFTAASASHESSASPREQPLPSRNAGGDSDGPAPGTAGEESGVG-RAASM-------RDGAQGAGT--GLEADLAHLGNKAEDSAPKLPV--GGKGATLENTKEGRWPFSRTGGPAGRSPPXXXXXXVSSSRAGETGTIPGSNRGAIPGRA-RGEASPAMPAPDDPRDTQGSGRTGQRETVGGDATANPTAG----RRGWGRPVGRSGVQSAGGNGGAQSPQNVGXXXXXXXXXXXTAAIDSKASAEDILASMGLKNGLSLGPEGLTGGVAAGAKTPAEMMAESIGGXXXXXXXGVQDTGEGGKQGLFSRLWNGNKGKRKE 4704
GETEK+I AY++A +LAPTLA PRVNLGAQLLQSGRL EAE VLL+A + +D G GR SL HIAK+H ELG +A +A R+AM E+GD LD S L+ GLILE+LG++ EAA+HF V DA++LEATMHLG+C QRLG+HHEAL +FL ASRL+P+NP IYE LLS V +AK ATG D + GD++P G V A +E E A A F AG +G GV + + G++E + V S H + A AAA+ A ET +V D +S + T AGSS+R+ +A MR++SES+ +DA T RGFF + G + VT TP+ V + T+T EG + A A + + SP+ I +P+ + G G + +G G A G E +G+ ++ P++ K LA D+ G+ G G VLP GTAV+ A A LAT + G G P GLE + E+EE + E Q G+T +R+ SP + + AD AD ++ EEG ++D A + G +G++ DG ++A+ G T+ V P DD A G P ++V E+ V + G G+TE E P + E G G++ V L V +P A E + S+G Q +G EE ++EA + +A + +VG ++ GGG+ + + V G E+ AG + D A+V A+ VSE++ +RAR+KAKLG+A+L++GQ KKA+ +FEK+ASIDPGWWGGFYY ALA DALG+AEAAA AL SALSV APTE +EVA L+ L+SKVLA+L + PV+ +LKTAMD SGLTF A +H+ P ++ L N+G + GT GVG R A+M R ++G G EADLA +A+++A +P G LEN + P GPAG + AGE T PG+ RG GR RGE S A P D + Q R + GG ++ P+ RR WG+ +AGG+ GA +P IDSKASA+DILASMGLK+G LG + LT G GA+TP XX + K+GLF R W+ + KRKE
Sbjct: 8 GETEKAIVAYSRAADLAPTLAAPRVNLGAQLLQSGRLAEAEVVLLSAAERARDDPISLAATYSNLGAVLKRSEKPEEALEYYSRAVRSGAGRPSLVHIAKLHHELGRSEQAREACRKAMLEEGDSLDASPLLVTGLILESLGNVGEAADHFTKVVHQDAENLEATMHLGACQQRLGQHHEALASFLAASRLQPDNPVIYESLLSTVSDAKRATGKEVDDNENGDVGDRNPEP-EGHVAADALDEETSPELVVEQAGSAKFVDVERAGGRQEGSNDGVVAVEADLAAQSTGGLEEQDSLDPQNLRAVDVGSKPHGEGSKAGFPAAATAAATAAMKETGRVEDFGQAASSGDSRGHVLPVGNAAKTVPGSGGAGSSVRQDSAEMRRQSESLRDDDAVPTTTRGFFGKQVPEGPTKAA-VTA---TPSAV------ILTTLTGTGGEGDAKAEGAA-----------------VANLADETLLPHDPSPDGIIGVQPSEGISGSEDEGMAMAVDGNGLATGTQETHAQGTPASSSGTEPSVPAKATDLDLGIIEEALAVRHDDNIGSTMAGRIGNQGTADDIEQGGRHVLPSSTELPVPNGNGNVEGTAVVGLDQAEAYALATRKTKLGSSSKEEEGGERGPAVP--GLEVQVVEEEED---------EKENERQANGRTVPATAAEREFASPSLNAANEAQTPDGAAD---------------ADXXXXXXXXXXXXXXXXXXGSDSFEEGDIASRDPVADVIHPAEPSLGNANGNKVSGDGHDIANRLG---TNNPVG----------PEDDATAPAGGSVDAVPEKSVDEEAVHTVGEKAVVQGETEEAEARRDSP-ERELVDGV-GAADVTVGTQSEELDLLPTTVDTPGANGGFFSEQ---ITNSLGEQAKEGVSEESIDGDNIXXXXXXXXXXXXXXXXXXXXXXXXIVEARAPTTIEAGTADDGTDEATVGNSRSSGDAGGGSGDITANGVPKGPESDETEAGTADSVDDVAEVP---------ASPIVVSEDDAKRARAKAKLGMAKLQQGQAKKAVSLFEKAASIDPGWWGGFYYAALAHDALGNAEAAAGALVSALSVPAPTEENEVAGLSALSSKVLAALSRGKQVPVAAVLKTAMDTSGLTFAVAPPTHDP---PSQRDL--GNSGNTNSVSTQGT-----GVGERTANMGGSAVVERTNSRGTANRPGREADLASQFGRADEAAGAIPSREGRAREGLENIGK-ELPSLGQRGPAGGD-------DGARRAAGEDRTYPGTARGTGSGRLQRGEGSRAPTDPLDLWNDQDLDRGREARGGGGGSSNAPSTSDVGHRRRWGQSGDGDFGDAAGGSHGAAAPS-----PGIGGSAGPPIMIDSKASADDILASMGLKSGTGLGSDRLTAG--GGARTPXXXXXXXX-------XXXXXXXXQREKKGLFRRFWD-RQSKRKE 1363
BLAST of mRNA_M-pyrifera_M_contig709.16921.1 vs. uniprot
Match: A0A6H5KFC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFC6_9PHAE) HSP 1 Score: 197 bits (502), Expect = 1.550e-53 Identity = 130/244 (53.28%), Postives = 159/244 (65.16%), Query Frame = 1
Query: 1 MLKSLLLSALSACLAVWATLQYQQRVDPRPS---QHQXXXXXXXXXXXXXXXHSSLTPA--SIDVAQALGLGRVLLARGEPEESALAFRVAXXXXXXXXXXXXXQDHAEAKHGLGLALRAAGRPEEALEACQEAERLDAELAVASACVGALLTESEDIVGALEALRSAAKKLENAKTMNRV------SAEGIHGRLGAALLAAGEVDEAITALTRALEGMALDSR----DHHAAYNLGVAWQSK 687
ML+S L S LSACLAV+ATL YQQ P P QH S+ P+ ++D+AQALGLGRVLL+RGE EE+AL +RVA ++H EA+HGLGLAL A GRPEEAL AC+EAERLD +L A++C+GA+LT++ +I GAL ALR AA+K E A + +A+ IHGRLGAALLAAGEVDEAI LTR + LD+R D HAAYNLGVAWQ+K
Sbjct: 1 MLRSALTSTLSACLAVFATLLYQQWARPSPQLQQQHVTVATKVDREQELAGSPSTAAPSPTTVDLAQALGLGRVLLSRGEHEEAALVYRVAASAAAAIDSN---REHGEAQHGLGLALLATGRPEEALAACREAERLDPDLPTATSCIGAILTDAGNIAGALTALRHAAEKAERAGVTAGLWRDAEGTADTIHGRLGAALLAAGEVDEAIEVLTR----VELDARRAGGDPHAAYNLGVAWQTK 237
BLAST of mRNA_M-pyrifera_M_contig709.16921.1 vs. uniprot
Match: D8LBP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP6_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 1.200e-13 Identity = 62/150 (41.33%), Postives = 90/150 (60.00%), Query Frame = 1
Query: 3439 AAVSEEEGRRARSKAKLGLARLKKGQTKKALLMFEKSASIDPGWWGGFYYTALAQDALGDAEAAARALTSALSVGAPTEASEVAELATLASKVLASLDGD-QLAPVSGLLKTAMDASGLTFTAAS---ASHESSASPREQPLPSRNAGGD 3876
A VS+++ +RAR KAKLG+A+L++G+ +KA+ +FE++A IDPGWW FYY AL E +EVA+LA+LAS+VLA+L+ D Q + +LKTAMD+SGL F S ++ A P E+P R+ G+
Sbjct: 4492 AIVSDDDAKRARVKAKLGVAKLQQGEAEKAVSLFEQAALIDPGWWEVFYYAAL-------------------------EDAEVAKLASLASQVLAALEDDEQHGSTAEILKTAMDSSGLMFAGTSFVRGEGQAGAGPPEEPRNERSLSGE 4616 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig709.16921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig709.16921.1 >prot_M-pyrifera_M_contig709.16921.1 ID=prot_M-pyrifera_M_contig709.16921.1|Name=mRNA_M-pyrifera_M_contig709.16921.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1570bp MLKSLLLSALSACLAVWATLQYQQRVDPRPSQHQQHQQQQQEQQEQQEQHback to top mRNA from alignment at M-pyrifera_M_contig709:10047..20741- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig709.16921.1 ID=mRNA_M-pyrifera_M_contig709.16921.1|Name=mRNA_M-pyrifera_M_contig709.16921.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10695bp|location=Sequence derived from alignment at M-pyrifera_M_contig709:10047..20741- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig709:10047..20741- >mRNA_M-pyrifera_M_contig709.16921.1 ID=mRNA_M-pyrifera_M_contig709.16921.1|Name=mRNA_M-pyrifera_M_contig709.16921.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=9420bp|location=Sequence derived from alignment at M-pyrifera_M_contig709:10047..20741- (Macrocystis pyrifera P11B4 male)back to top |