mRNA_M-pyrifera_M_contig7089.16919.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7089.16919.1
Unique NamemRNA_M-pyrifera_M_contig7089.16919.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig7089.16919.1 vs. uniprot
Match: D8LHV9_ECTSI (Putative: silimar to centromere/kinetochore protein zw10 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV9_ECTSI)

HSP 1 Score: 378 bits (970), Expect = 6.580e-122
Identity = 209/308 (67.86%), Postives = 229/308 (74.35%), Query Frame = 1 
Query:    1 GGKQDSSAVKTFRLEACQVSTVAKAFVSLVRATLTEACSDEVPPHCARELFRTARDMLDLFRAVIPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGHEFRGGLPPPANQTATMIDTVPLFRELATQSLSEQQRRQQQQLQEFFADVDVLASTETSAP-----------LLEPADSAFEGMFP---GDDAKAARGGRGGLD-RGWMAAGRKGXXXXXXXXXVEASAYGGDAGEEGRAAAAVRKSVYHLRQLRQAWWKVLPDRAYTRVMGALVSLVAGKVCTPVLGAKDLGEEQTYALHRIFKTLEEA 879
            G  +D++  + FRLEACQVSTVA + V+LVRATL EACSD++P HCA+ELFRTARDMLDLFRAV+PVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGHEFR GLPPPANQTATMIDTV LFRELA  S SEQQ+RQQ+QL EFF  VDVLASTE               L +   SA EGMFP   G++    R     LD RGWMAA                  YGG  GEEG  A AVRKSVYHLRQLRQAW KVLPDR Y R MGAL+SLVAGK+CTPV+GA+DL EEQT+ALHRIFKTL EA
Sbjct:  493 GHDKDNNKTQAFRLEACQVSTVASSLVALVRATLAEACSDQIPLHCAKELFRTARDMLDLFRAVVPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGHEFRHGLPPPANQTATMIDTVHLFRELAAHSFSEQQQRQQRQLHEFFVGVDVLASTEAXXXXXXXXXXXXXSLHDATTSALEGMFPHGEGENYPRER-----LDARGWMAA---------SGGDAATVGYGGGGGEEGSTAVAVRKSVYHLRQLRQAWCKVLPDRVYKRAMGALLSLVAGKICTPVMGAQDLAEEQTHALHRIFKTLGEA 786
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BLAST of mRNA_M-pyrifera_M_contig7089.16919.1 vs. uniprot
Match: A0A836CAB9_9STRA (Centromere/kinetochore Zw10-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAB9_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.750e-45
Identity = 118/308 (38.31%), Postives = 155/308 (50.32%), Query Frame = 1 
Query:    1 GGKQDSSAVKTFRLEACQ---------------VSTVAKAFVSLVRATLTEACSD--EVPPHCARELFRTARDMLDLFRAVIPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGHEFRGGLPPPANQTATMIDTVPLFRELATQSLSEQQRRQQQQLQEFFADVDVLASTETSAPLLEPADSAFEGMFPGDDAKAARGG-RGGLDRGWMAAGRKGXXXXXXXXXVEASAYGGDAGEEGRAAAAVRKSVYHLRQLRQAWWKVLPDRAYTRVMGALVSLVAGKVCTPVLGAKDLGEEQTYALHRIFKTL 870
            G K  +S  + F  EACQ               V+ V +  ++     L EAC +  +VPP  ARELFRTARD+L+LFRAV+P +H   +  VPR+AA+F NDC +LAHH  T+GH +R  LPPP N  ATM+D +               +RQ++QL EF A  D + + +                  GD     RGG RG L R   AAG +                 G  GE+G AA  VR+ VYHL+QL QAW  VLP   Y RVMG L  + A  V   VL   +  E+QT++LHR+  +L
Sbjct:  778 GKKALASQQRVFVFEACQEIXXXXXXXXXXXXXVTQVVQQVLAKAHEALAEACEEGAQVPPLIARELFRTARDVLELFRAVVPARHGEQMQNVPRLAALFHNDCAFLAHHAATIGHRYRQRLPPPVNSVATMVDMI---------------QRQREQLLEFCAGADFVGAVDDD----------------GDGYAFERGGARGELSRLAAAAGLR----------------SGGEGEDGEAA--VRRVVYHLKQLSQAWRGVLPASTYARVMGELFEVPAQAVLQQVLAQDEFAEQQTHSLHRLITSL 1036
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BLAST of mRNA_M-pyrifera_M_contig7089.16919.1 vs. uniprot
Match: A0A7S2RK91_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RK91_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.060e-28
Identity = 66/135 (48.89%), Postives = 84/135 (62.22%), Query Frame = 1 
Query:   40 LEACQVSTVAKAFVSLVRATLTEACSDEVPPHCARELFRTARDMLDLFRAVIPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGHEFRGGLPPPANQTATMIDTVPLFRELATQSLSEQQRRQQQQLQEFFADV 444
            L  C V+TVAK  V +    + +AC        A  L+RTAR+++DLFRAVIP +H+  L  +PR AA+F NDCLYLAH  +TL H++RG LP P N+TAT++D VP  R L  Q L  Q   QQ QL EF   V
Sbjct:  528 LPTCHVTTVAKDLVLMAHEAMHKACG--ASSLAAATLYRTARELMDLFRAVIPQRHSETLQSLPRSAALFHNDCLYLAHEALTLAHQYRGRLPAPLNKTATLVDVVPALRSLGEQVLQRQISLQQGQLDEFLKGV 660
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BLAST of mRNA_M-pyrifera_M_contig7089.16919.1 vs. uniprot
Match: A0A7S2MDJ5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MDJ5_9STRA)

HSP 1 Score: 114 bits (285), Expect = 6.550e-25
Identity = 60/121 (49.59%), Postives = 80/121 (66.12%), Query Frame = 1 
Query:   40 LEACQVSTVAKAFVSLVRATLTEAC-SDEVPPHCARELFRTARDMLDLFRAVIPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGHEFRGGLPPPANQTATMIDTVPLFRELATQSLSEQ 399
            L  C V+ VA   ++L R+ L +AC S ++ P  A  L+RTAR+++DLFRAV+P  HA AL  +PR+AA+F NDCL+LAH  +TL H +R  LP P N+ ATM+D VP  R L  Q L  Q
Sbjct:  422 LPRCHVTQVAVDVLALTRSALAKACDSKDILP--AATLYRTAREIMDLFRAVVPQHHATALASLPRLAALFHNDCLFLAHAALTLAHRYRSRLPTPLNKCATMVDMVPPLRALGKQVLQHQ 540
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BLAST of mRNA_M-pyrifera_M_contig7089.16919.1 vs. uniprot
Match: UPI0014257F86 (centromere/kinetochore protein zw10 homolog n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257F86)

HSP 1 Score: 114 bits (284), Expect = 1.250e-24
Identity = 57/136 (41.91%), Postives = 85/136 (62.50%), Query Frame = 1 
Query:   31 TFRLEACQVSTVAKAFVSLVRATLTEACSDEVPPHCARELFRTARDMLDLFRAVIPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGHEFRGGLPPPANQ-TATMIDTVPLFRELATQSLSEQQRRQQQQLQEFF 435
            TF+   C++S   +  V+L   TL EA        CA +LF+T R M +L+ AVIP  H ++L   P+++A+  N+C+Y+AHH++TLGH++R  LPPP  Q +AT +D +P FR LAT    EQ R Q+ Q+ E+ 
Sbjct:  436 TFQFPQCRISITTQQLVNLAYETLFEATQSS--QQCATQLFQTTRSMFELYCAVIPTYHKDSLAKFPQLSALHHNNCMYIAHHLLTLGHQYRDQLPPPLCQGSATFVDEIPQFRHLATDCFMEQMRTQRNQVIEYL 569
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BLAST of mRNA_M-pyrifera_M_contig7089.16919.1 vs. uniprot
Match: UPI0018D7A348 (centromere/kinetochore protein zw10 homolog isoform X2 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D7A348)

HSP 1 Score: 112 bits (279), Expect = 5.720e-24
Identity = 56/136 (41.18%), Postives = 87/136 (63.97%), Query Frame = 1 
Query:   34 FRLEACQVSTVAKAFVSLVRATLTEACSDEVPPHCARELFRTARDMLDLFRAVIPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGHEFRGGLPPP-ANQTATMIDTVPLFRELATQSLSEQQRRQQQQLQEFFA 438
            F L  C VS   +  V+L   TL EA S+   P CA +LF T R+M ++F  V+P  H ++L  +P++ A+  N+C+Y+AHH++TLGH++R  LPPP  + T+T +D +P+FR+LA++    Q R Q+ QL E  +
Sbjct:  435 FALPECAVSESIECLVNLAYQTLQEAASNT--PQCAIQLFYTVRNMFEIFCDVVPTYHRDSLQKLPQVCALHHNNCMYIAHHLLTLGHQYRQSLPPPLCDGTSTFVDLIPVFRKLASECFLAQMRIQRDQLVESLS 568
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BLAST of mRNA_M-pyrifera_M_contig7089.16919.1 vs. uniprot
Match: A0A8B7YKW3_ACAPL (centromere/kinetochore protein zw10 homolog n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YKW3_ACAPL)

HSP 1 Score: 112 bits (279), Expect = 5.760e-24
Identity = 56/133 (42.11%), Postives = 85/133 (63.91%), Query Frame = 1 
Query:   34 FRLEACQVSTVAKAFVSLVRATLTEACSDEVPPHCARELFRTARDMLDLFRAVIPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGHEFRGGLPPPANQ-TATMIDTVPLFRELATQSLSEQQRRQQQQLQE 429
            F L  C VS   +  V+L   TL EA S+   P CA +LF T R+M ++F  V+P  H ++L+ +P++ A+  N+C+Y+AHH++TLGH++R  LPPP     +T +D +P+FR+LA+Q    Q R Q+ QL E
Sbjct:  444 FALPECAVSESVECLVNLAYQTLQEAASNT--PQCAIQLFYTVRNMFEIFCDVVPTYHRDSLEKLPQLCALHHNNCMYIAHHLLTLGHQYRQSLPPPLRDGLSTFVDLIPVFRKLASQCFLAQMRTQRDQLLE 574
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BLAST of mRNA_M-pyrifera_M_contig7089.16919.1 vs. uniprot
Match: UPI0018D814D0 (centromere/kinetochore protein zw10 homolog isoform X1 n=5 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D814D0)

HSP 1 Score: 112 bits (279), Expect = 5.760e-24
Identity = 56/136 (41.18%), Postives = 87/136 (63.97%), Query Frame = 1 
Query:   34 FRLEACQVSTVAKAFVSLVRATLTEACSDEVPPHCARELFRTARDMLDLFRAVIPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGHEFRGGLPPP-ANQTATMIDTVPLFRELATQSLSEQQRRQQQQLQEFFA 438
            F L  C VS   +  V+L   TL EA S+   P CA +LF T R+M ++F  V+P  H ++L  +P++ A+  N+C+Y+AHH++TLGH++R  LPPP  + T+T +D +P+FR+LA++    Q R Q+ QL E  +
Sbjct:  444 FALPECAVSESIECLVNLAYQTLQEAASNT--PQCAIQLFYTVRNMFEIFCDVVPTYHRDSLQKLPQVCALHHNNCMYIAHHLLTLGHQYRQSLPPPLCDGTSTFVDLIPVFRKLASECFLAQMRIQRDQLVESLS 577
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BLAST of mRNA_M-pyrifera_M_contig7089.16919.1 vs. uniprot
Match: A0A6P5B072_BRABE (LOW QUALITY PROTEIN: centromere/kinetochore protein zw10 homolog n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5B072_BRABE)

HSP 1 Score: 111 bits (278), Expect = 7.980e-24
Identity = 57/136 (41.91%), Postives = 79/136 (58.09%), Query Frame = 1 
Query:   34 FRLEACQVSTVAKAFVSLVRATLTEACSDEVP-PHCARELFRTARDMLDLFRAVIPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGHEFRGGLPPP-ANQTATMIDTVPLFRELATQSLSEQQRRQQQQLQEFF 435
            FRL  C++S      V L   TL EAC      P CA ++F   RDM +LF  V+P  H   L  +P + AV  N+C Y+AHH++TLGH+F   LP P A+  AT +D +P+ REL T+ L +Q R Q+ Q+ E+ 
Sbjct:  469 FRLPXCRISVTVDKLVKLAYTTLCEACEVTTSNPRCAVQMFYAVRDMFELFMEVVPCYHEENLKKLPHLTAVHYNNCFYIAHHLLTLGHQFLEHLPKPLASSCATFVDQIPVLRELGTECLLQQMRIQRDQVLEYL 604
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BLAST of mRNA_M-pyrifera_M_contig7089.16919.1 vs. uniprot
Match: UPI0018D6AF8E (LOW QUALITY PROTEIN: centromere/kinetochore protein zw10 homolog n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D6AF8E)

HSP 1 Score: 110 bits (274), Expect = 1.400e-23
Identity = 55/136 (40.44%), Postives = 86/136 (63.24%), Query Frame = 1 
Query:   34 FRLEACQVSTVAKAFVSLVRATLTEACSDEVPPHCARELFRTARDMLDLFRAVIPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGHEFRGGLPPP-ANQTATMIDTVPLFRELATQSLSEQQRRQQQQLQEFFA 438
            F L  C VS   +  V+L   TL EA S+   P CA +LF T R+M ++F  V+P  H ++L  +P++ A+  N+C+Y+AHH++TL H++R  LPPP  + T+T +D +P+FR+LA++    Q R Q+ QL E  +
Sbjct:  191 FALPGCAVSESIECLVNLAYQTLQEAASNT--PQCAIQLFYTVRNMFEIFCDVVPTYHRDSLQKLPQVCALHHNNCMYIAHHLLTLSHQYRQSLPPPLCDGTSTFVDLIPVFRKLASECFLAQMRIQRDQLVESLS 324
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7089.16919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHV9_ECTSI6.580e-12267.86Putative: silimar to centromere/kinetochore protei... [more]
A0A836CAB9_9STRA2.750e-4538.31Centromere/kinetochore Zw10-domain-containing prot... [more]
A0A7S2RK91_9STRA1.060e-2848.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2MDJ5_9STRA6.550e-2549.59Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
UPI0014257F861.250e-2441.91centromere/kinetochore protein zw10 homolog n=1 Ta... [more]
UPI0018D7A3485.720e-2441.18centromere/kinetochore protein zw10 homolog isofor... [more]
A0A8B7YKW3_ACAPL5.760e-2442.11centromere/kinetochore protein zw10 homolog n=1 Ta... [more]
UPI0018D814D05.760e-2441.18centromere/kinetochore protein zw10 homolog isofor... [more]
A0A6P5B072_BRABE7.980e-2441.91LOW QUALITY PROTEIN: centromere/kinetochore protei... [more]
UPI0018D6AF8E1.400e-2340.44LOW QUALITY PROTEIN: centromere/kinetochore protei... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7089contigM-pyrifera_M_contig7089:4334..12508 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score384.0
Seed ortholog evalue6.1e-104
Seed eggNOG ortholog2880.D8LHV9
Preferred nameZW10
KEGG koko:K10481,ko:K11578,ko:K14809,ko:K21122
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000075,GO:0000132,GO:0000226,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000777,GO:0000779,GO:0000793,GO:0000819,GO:0000910,GO:0000922,GO:0000940,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005783,GO:0005794,GO:0005795,GO:0005819,GO:0005828,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0006810,GO:0006888,GO:0006890,GO:0006996,GO:0007010,GO:0007017,GO:0007030,GO:0007049,GO:0007059,GO:0007060,GO:0007080,GO:0007088,GO:0007093,GO:0007094,GO:0007096,GO:0007107,GO:0007112,GO:0007140,GO:0007163,GO:0007276,GO:0007346,GO:0008104,GO:0008150,GO:0009987,GO:0010256,GO:0010324,GO:0010564,GO:0010639,GO:0010948,GO:0010965,GO:0012505,GO:0015630,GO:0016043,GO:0016192,GO:0017016,GO:0017137,GO:0019237,GO:0019899,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030010,GO:0030071,GO:0031267,GO:0031577,GO:0031984,GO:0032501,GO:0032504,GO:0032506,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033206,GO:0033365,GO:0034501,GO:0034502,GO:0034613,GO:0036063,GO:0036090,GO:0040001,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043565,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044430,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045132,GO:0045786,GO:0045839,GO:0045841,GO:0045930,GO:0046907,GO:0048193,GO:0048232,GO:0048285,GO:0048519,GO:0048523,GO:0048609,GO:0050000,GO:0050789,GO:0050794,GO:0051020,GO:0051128,GO:0051129,GO:0051179,GO:0051233,GO:0051234,GO:0051276,GO:0051293,GO:0051294,GO:0051301,GO:0051303,GO:0051310,GO:0051321,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051704,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0061024,GO:0061640,GO:0065003,GO:0065007,GO:0070727,GO:0070939,GO:0071173,GO:0071174,GO:0071459,GO:0071840,GO:0097159,GO:0098687,GO:0098791,GO:0098813,GO:0099023,GO:0099024,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140013,GO:0140014,GO:1901363,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902850,GO:1903046,GO:1903047,GO:1905818,GO:1905819,GO:1990423,GO:1990837,GO:2000816,GO:2001251
EggNOG free text desc.spindle assembly checkpoint
EggNOG OGsKOG2163@1,KOG2163@2759
Ec32 ortholog descriptionputative: silimar to centromere/kinetochore protein zw10 homolog
Ec32 orthologEc-18_000680.1
EC3.4.19.12,3.6.4.13
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03009,ko03036,ko04121,ko04131
Exons5
Model size879
Cds size879
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7089.16919.1prot_M-pyrifera_M_contig7089.16919.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7089 4334..12508 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816602.735797-CDS-M-pyrifera_M_contig7089:4333..44951622816602.735797-CDS-M-pyrifera_M_contig7089:4333..4495Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7089 4334..4495 -
1692278071.5344932-CDS-M-pyrifera_M_contig7089:4333..44951692278071.5344932-CDS-M-pyrifera_M_contig7089:4333..4495Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7089 4334..4495 -
1622816602.7467084-CDS-M-pyrifera_M_contig7089:5509..58401622816602.7467084-CDS-M-pyrifera_M_contig7089:5509..5840Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7089 5510..5840 -
1692278071.547376-CDS-M-pyrifera_M_contig7089:5509..58401692278071.547376-CDS-M-pyrifera_M_contig7089:5509..5840Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7089 5510..5840 -
1622816602.757411-CDS-M-pyrifera_M_contig7089:7357..75541622816602.757411-CDS-M-pyrifera_M_contig7089:7357..7554Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7089 7358..7554 -
1692278071.5585933-CDS-M-pyrifera_M_contig7089:7357..75541692278071.5585933-CDS-M-pyrifera_M_contig7089:7357..7554Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7089 7358..7554 -
1622816602.7685537-CDS-M-pyrifera_M_contig7089:10879..109451622816602.7685537-CDS-M-pyrifera_M_contig7089:10879..10945Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7089 10880..10945 -
1692278071.5691984-CDS-M-pyrifera_M_contig7089:10879..109451692278071.5691984-CDS-M-pyrifera_M_contig7089:10879..10945Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7089 10880..10945 -
1622816602.7810612-CDS-M-pyrifera_M_contig7089:12385..125081622816602.7810612-CDS-M-pyrifera_M_contig7089:12385..12508Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7089 12386..12508 -
1692278071.5787046-CDS-M-pyrifera_M_contig7089:12385..125081692278071.5787046-CDS-M-pyrifera_M_contig7089:12385..12508Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7089 12386..12508 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7089.16919.1

>prot_M-pyrifera_M_contig7089.16919.1 ID=prot_M-pyrifera_M_contig7089.16919.1|Name=mRNA_M-pyrifera_M_contig7089.16919.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=293bp
GGKQDSSAVKTFRLEACQVSTVAKAFVSLVRATLTEACSDEVPPHCAREL
FRTARDMLDLFRAVIPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGHE
FRGGLPPPANQTATMIDTVPLFRELATQSLSEQQRRQQQQLQEFFADVDV
LASTETSAPLLEPADSAFEGMFPGDDAKAARGGRGGLDRGWMAAGRKGGG
GGAGGGEVEASAYGGDAGEEGRAAAAVRKSVYHLRQLRQAWWKVLPDRAY
TRVMGALVSLVAGKVCTPVLGAKDLGEEQTYALHRIFKTLEEA
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mRNA from alignment at M-pyrifera_M_contig7089:4334..12508-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7089.16919.1 ID=mRNA_M-pyrifera_M_contig7089.16919.1|Name=mRNA_M-pyrifera_M_contig7089.16919.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8175bp|location=Sequence derived from alignment at M-pyrifera_M_contig7089:4334..12508- (Macrocystis pyrifera P11B4 male)
GGAGGGAAGCAGGATTCCTCCGCGGTGAAAACTTTCAGGCTGGAAGCTTG
CCAGGTTTCCACGGTGGCGAAGGCGTTTGTATCTCTCGTCCGCGCAACCC
TCACGGAGGCGTGTTCTGATGAGGTGAATATTGCTATTGTTTGTTTTATC
GGCGTGAAACACTGCGATTGATATTTGTAAATCACAAATGGCCGGTTCAC
CGTCTGGTTTCGGTCACTCAAGGCCTCGTTTTGTTTACTACACTTATTCT
AGGGTGGGGAGTTTCTTGATGGCTGAAGGATGTCGGTCAACGGGCCCGAG
TGCCGTCAACCATCGTATCATAGTCGATTGGTGTTGGGTAGCTGCTGTTT
TTATTTTTGTTCTTCGTTCTTCTGGGTTTTCGTTACGCGTAGACTTGAAG
GGTGCGATATCTGGTATTATTATCGTACTGTTTTTGATATTGCTGTGTTC
CGCGTCGCGCGTTGCCTAAAATATACGACAGCCAACTGTTTTTCTTCCTT
CTGGTTTTAGTGTGTTTGCGAGCTGGTTTTTGCTTGTGTTTTTTTGCGAT
TTGTATCGTGTAATCTCTGTTCGTCTGTTTATTGCTTCTTTTCCGAGCGT
AGCTGCTTTCAGACCATATCGAGTATCGGACATTGGGTTTCGGATATTGG
GTATCGGAATTCGGGTATAGGATATTGGGTATCGGAATTCGGGTATAGGG
TATTGGGTATCGGACGACTGGCATCGGATGTCGGGTGTCGGATGATCGGA
TGTTTTTGGTGGGTTTTATGTCTACTTCAGTCGGACGTTACCGGCTTTTC
GGCGCCTATCGTATAGCCGAAGTGCTCGCGCAACCGGCCAGGGTGTCGTT
GTATTATTTACCTCGCCGCTGGGCTCCGAGCCTAGCCACGGCGGTCATAG
GGAAATGTCGAAATATCAATAACTCCGTTGAAGTCAACCCAAGGGGAGCT
ACGAGTACCAGGTACCTCTTACCTGGTAGCTTTTACCGTGTCACTGTGCA
GACGCAACTATTTGACCCTAATTTCCATGTCATTTGTCCCCGCAACCGAG
ACGGGGGTGCACTTCAAAAAAGGGTTATAGTACCTGGTAGGCGGTAGTGG
CAGTTGGCGGCGATGGTGGCGTTTAAGAACGGTGTAGTCTGCTGCAACAG
TAGCTCCTTGCGGCGTTAACAGCTGACGGTCGCCGGATTTTTGCTGATAA
TGACCCCCCCCCTGCCCCCTGGTCTACGCAGTACGTGCAACATGCATGGT
AAATATGCACTGGTGTGCTGGTATATGCCATATTGCTGTGTCTTGGAGAA
GTATCATACGATGGTATACGCTACCAGGTATATAGGTAAAATCCTGTAGC
TCACGGTTACTGCTAGCCGGTCGCTTACCGTTTTTTAGGTTTGCGTTTCT
TTTTTGGGTGGCCTCCATTCAGGTGCCGTGTTATCCAACGATGAGCGGCT
GCACCGCGCTGACTTTTTATGTAGTTGTCGACGCGCAAACCGCGCTGCTG
GGCTGGCGAAGCCACTGTCTGTTTTCGCGCGTGTGCTAATTTACTCCCAA
TAACTGTCGCCAGGTACCTCCTCACTGCGCTAGGGAGCTGTTCCGAACGG
CTCGGGACATGTTGGATCTCTTCAGGGCGGTGAGCAACGACAGCCAATCC
CTGCCTTGCTGCCCCCTATCTCCTCTTTCGCAGCCCCCTACTGCTGTCCC
CTCTCCCCTTTTTTATAATTCTTCATTACTGCCTCCTATCCCCTCTTTTA
CAAGCCCAGGCTGATTTCTCTTGTCCTCTCTTTCACACCTCTAACTGCTG
CCCCCCATCCCCTCTTTGGCAGTCCCTCACTACTGTCCCCTATCCCCTCT
TTTACAGCCCCTATATGCTGTCCCCTATCCCCTCTTTTGCAGTCCCTCAC
TGCTGTCCCCTATCTTCTTTTTTTCAGCCCCTCACAGCAGTGCCTCACAG
TGGGTGTCCATACGTTATTTGCTCCGTGTATTGGTATGGAGATCCCGGTA
ACAAGGTATGTCTAACAGCCTGCTGCGCGCCGCCAAGTGCTGTCTTTGGG
GTTTCCACGTCGAGGCGGTCGTCATCGTTTGCTGGAGCACCGCGCGTGCC
GAATAGGACCTTGTCTCTCAGAGGCGACGCCCCACCCCTACAGCACTGCT
TGAAGCAAGAAGCGAGACCTTACTGCTTGATCATACAGGTTAAAACAAGG
AGCGAGACTATACTGCTTAGTCATGCAGCTTGAAGCAAGAAGCGAGACCT
TACTGCTTTATCATACAGCTTAAAGCAACAAGCGATACTATACTGCTTAG
TCATGCAGCTTGAAGCAAGAAGCAAGACTATGCTGCTTGGTCGTACTGCT
TGAACCAAGAAGCGAGACTATACTGCTTGCTCATACAGCTTGAAGCAAGG
CGGGAGACTATAGTGCTTGCTCATACTGCTTGAAGCAGAAACTGCTTGAT
CATACAGCCTGAAGCAAGAAGCTAGACGTTACTGCTTGATCGTACTGCTA
AAAACCAAGAAGCGAGATTATACCGCTTGATCATACCGCATGAAGCAAGA
CGCAAGATTATACTGCTTGATCATAGAGCTTGAACCAGGAAGCGATACCA
TACTGCGTGATCATACAGCCTGAAGAAAGAAGCTAGACCTCACTGCTTGA
TCCTACTGCTAGAACCAAGAAGCGAAATTATACTGCCTGATCATACCGCT
TGAAGCAAAAAACGACAAACCGCGGTTGTTTATCGTCGTTTCTCGCGCTG
CGTTTCTATGACGACGTCTTTTTAACCCGGAGCGCAATACATATATATAT
ATTACATGTTATATGTACCCGGTACGGTCCTACATGCTGCTGTAGCGGTG
TGTTGTCGTGGGCGCAAGGCGAAAGGGGCTAGTTGGGCGGGGCGATCGGG
TGACATACCTTTCATAAGTACGTACCGCCGTCACAGCACTTGCAAATTCG
GAGTTAATCCGTGTAGGACCGTTCTCCGGACATGGGGACAACTTACTTGA
AAGTTAAGTCAAATAGATGTCTACATATTTTTATGTACAGCAGTGCACTA
TTAATATTACTATTATAATAGAAGGGTTTCTAATGGTTGGCTCGGATTTT
GCACCAAACATCAGAATTGTTTTTTTCGTTAGGACACACGTTGCCTCACA
TGATGATATAGGCCTGACCGCGAAAATTTGTCTCACATATAGTAGGAACT
TGAGCCTGGCCCTAAGTAAGAACACCCTGCCTCACGTAAGAATTTGGGCT
TGACCCTGAATAAGAATGCCTCAAATAAGAACTTGAGCCTGGCCCTAAAT
GAGAGCACCCTGCCTCACATAAGAACTTGAGAGCCTCGTCCTAAAATGAG
GACACACTCTGCCTCCCAGAAGGATTTAAGCCTGGCCCTAAATGAGAACA
CCCTGCCTCGTAAGAACTCAAGCCCGGTCCTAAATAAGAACACTTCCTCA
CATAAGAACTTGAGTGTGGCCCTAAATAAGAACACCCTGCCTCACATAAG
CACTTGAGCCTGGCCCTAAAAAAAGACACCCTGCCTCACATCGCAAATAA
TTTGAGCCTTGCACGAACTGAGAACATCCTGCCTCACTAAAGAACTTGAG
CCTGGACCAAAAACAGATTTTCCTAGGTGGTGTCGGGTTCTGCTGTGTAC
CCTCCTTCGGGACACAGGGACTGTGGGAGAGGACCTGTGAAGTAGTGGCA
GATGCGCACTTTGTTCGCTCGACGCTCTAAATTCAAACACGGCCCCTCCT
TTTTCTTCAAAGAAAAGCTTGTTGTACGCTTCGAGGACCCGTATTAACGA
GGAAATATCGAATCCAATTTGGAAAATGTAAAATCTACGTACTCTTTTTT
TTGTCATTGGTCTAAGCACGCACAGCTAGTCACCCAAGAGTGTGATTCGG
GGATATACGAAATTTGATTCGGACGAAAAATGAAGAAGAAAAAGAAGTCC
CCAAAGACTTCTTTCGTTGCCAATCAGAACCGTATTTGAGAGTTGATCCG
ACTTGGCTTGGCATGTTCACGGTGGTTCGACACCCCCTGGACACCCTGGC
GCTTTTCTCGATCGCATGGATGACCGCGACCGAGACGATAAAACCTGAAC
CTCGACGCGACGCCACCGAGACGACAGCTGCGCCCACGCCTACAGACCAT
AGCACAGGGTACCCCGGCGGTGGTGCCTCGAAATAAATCATGGCGGTTGC
GAGCCCAATTTTAAATCGAGCTCGATCGGACAAAACGGCACGAGAACCGA
CCGATTGACCCCGAAACGGAGGACACGCTCAAGGCTGAGATAGCTGCGAT
GTCGTCGCTGTTCCGTGCGTGGCGTATTACGGCACCCTCCGCCCACCCGA
GAGGCCCTGAGATCGATACAAGCTTCCTAGCCTGCGCCGCCAAGAATAGA
ACGAGGCTGGCGGCGCCGCGCGCGCAACGAGGCATGCCGTCGCTCTCCAT
ATCTGTTGTCGGTGTTTGCCAGCTGGGCGTTGTGTGTCGTGCTGCGTTTT
TCTGCTTTCTTATTATTTTAACAAATCATACATCGTTTCTCGATAGCACC
CAAACACGTATGTGTGATTTTTTTGTTTTCCCGTTAATACGGACCCTAAA
TGCAAACACTCGTTTCGTTCGGCAGACAGATACAAAATTGAAAACATGTT
TTTTTTGTTTGTTGTACAGTGCGCCCCTCAATGCAAAAACCGATCATCAT
CTTTTTTGCTCGGCAGAGAGGTGTTAAGCTTGTTATAATTACAATAATCC
CAAAGTTTGGTGATTGAAGGCTCTAAATTCTAGCAACCCCCCCTCAATTT
CTGCTGTGCGGCACGCAGACGCAATGCTTGTTTGCTGAATGCTCTAAATT
CTAGCACAACCCCTCACTTTTGATTTGTTTGGCCTGCAGACGCATTTTTG
TTGTTGATTGCTCTCAAGTCTAACACGGCCCTGCACTTTTGTTGTGGTCT
GCAGGTGATCCCTGTCCAGCACGCTAATGCCCTCGATGGTGTTCCTCGCA
TCGCGGCGGTTTTTCAAAACGATTGCCTCTATTTGGCGCATCACATGGTT
ACCTTGGGGCATGAGTTCCGCGGAGGGCTGCCCCCGCCGGCCAATCAGAC
GGCTACCATGATCGACACCGTCCCCCTATTCCGAGAACTGGCGACGCAGA
GGTAAAGGCGGCGTGGGGCACTCAAACCGACACCATGATCGGCCAGCCCT
GTTTCGGGCGGTTTACCACAACAGATAGCAAAACAATGTCACGAATCGTT
ACAAAAAAAAAAGCGACAATTTCGTGCGCGAATCGTGACATTTGTCGCGA
ATTGTGGTATTTGCAAAAAAAAAAGGCGATAATCTCGTTCGCGAATCGTG
AAAATTGTCGCGAGTCGTGATATTTGATAGAGAAATGGTTTGACCGATGT
CAAGAACATTGATGTGCTTCGTGATATATAGACGTGATCGTTTTTGTTAG
AAAACGGCACACGCTGTAAAACCACGCCAATTTACAAAATGTCACGAATC
GTGTTTCTTTTGGCGCTGGTATAGAGCGGTGTCGCTTGGCCTCGGCTTTT
GGCGCTCCAAGTGTTCCCTTTTCGCCTTCTATCCACGCCAACCGCTAACC
TTTGTGTGTTGCGTTTCACATGAGTCCTTTCAGCTCGGTTATGTTGTAGC
GACCAAACAAATGATGGGGTTGGTCCTTTCAACCATCTGTTTGCAGAGGA
CGGTTGGTAGGTGTGGTCCAATCGTCGCGGCTGGCCTGACAGACGTCTCT
TAATATTTCTGTGACCAGTATAACAGCTCTATTGCGGGGGAAGGGGAGTA
TACACTTAGTGGTCAAAACCAAATTTGATGTTTAAACATGGTGGGGTACC
TATTTTTGGTTATATTGTGGGTACGGACTACTCTTAACACGTATTTCAGC
GAATAGGGGGCGCGAATCGTGTCACGGTATTCACGTCGCTCACAGCAGCA
ACCAGTCGCCCTACATGCATTGCGATGATCACCAGGCTTGCCAGGGGTGT
CGCCACCCATGTGCAACATCAAAGGTCTGATATAACCCCCTCCCTTCCAC
CCCCTATACTTTTTTTTTTTAGTTATATGCATGTATGGGTTGGGTTGGCG
TCGGTTAGCGAAGACGCCGTAAAGCACGCCTACTATCTGCGTGAGCTATT
CAACCAGGGTACCGTCCGTTTTAAATTTTGGCAGTCACCGCGGCTGGCGG
TCGAGTTGGATCGTTAGTGCGGGGTGGAGAACCTTAACTTCGCACAAGTG
GAATGATCGTATCATGTAGAGTGTACCGGTACATGGTAAGGCATCCACGA
GGCAGTTACATGCTGCAGTATACCCATTGCTGTCTCTGGAAGTGACCACA
CCAGAAAACAAATCAATTCATTCGAAGCTATCATCCATAGGCAAGTCCGC
CTCACAAGCGGTCCTTAGTAGGATGCAATTCACCCTTCACGCGAATCGCG
CAACACCTCACGGCGCCTCGCGCTTGGTGCAATCAATGTCTGCCTAGTCG
GTGAAAACCCGACGTGCCCCGTCCCGGCATTGTAGAGATGCGAGGGTCTA
TGGCCATGCGACTACGGCCATGCCATGACATGAGTACACCTCCTTCCTTG
ATGGCATTCGTCTCTACCCTCTTCCCCATTCCCTCCTTTCGCCACCATCG
CGGTGACAACACTACCAGCTTGTCGGAGCAGCAGCGGCGGCAACAGCAAC
AGCTGCAGGAGTTCTTCGCTGACGTCGATGTCCTGGCTTCCACTGAGACT
TCCGCCCCTCTTCTAGAACCCGCAGACTCTGCCTTCGAAGGCATGTTCCC
CGGGGATGATGCGAAAGCTGCCCGCGGGGGGAGAGGTGGTCTTGACAGGG
GTTGGATGGCTGCTGGCAGGAAGGGCGGAGGTGGAGGCGCCGGTGGGGGT
GAGGTGGAGGCATCGGCGTATGGGGGTGATGCGGGGGAGGAAGGGAGAGC
GGCGGCGGCGGTGCGGAAATCTGTGTATCATTTGCGACAGCTCCGACAGG
TGGGGGTTACTGGGTACTGCTTGGCGCCAGCGTTTGGTTGGTCTAGATAC
CGGTGATAGCAGTGAACAGACCCGTCGCTGGCCAAAAAAAAAACGTCGAC
AACTACAGGCACTCTGTACGGAAATGTGAGGACCGTTTGAGTATTTATTT
TGATATCCGAAAGGTCCTTGCGCTCCCGAGTAGGGAACGTTGTTGAAAAG
CTGAACACCCCGACAGAGTCGGGTCAATCTTGGACGTTGCATGAGGAATG
AGCGCACGTTTTTTCACCGGTACGGACCCCTTAGCGCGGCGTGCCAATCC
TGTCTTGATGCCAGCAGAGCTTGGCATGGCGCGCCAGTCAGTCCACGTTG
ACATATTTTATGGGTCGCTTGATCGTGTTTTGTGGTTACGGTAGACACCG
AGACCACCGAGCCACTATCAATGGCCAGCGCTGACTGCTATTAGCACTAT
TGCGGGGGTCCATAGTTAATAGGACCTATGGTATACATAAAAACCTATAT
ATTTACCTATTTTTACTAACATATTTGGTCCTATTTGCTATGGTCCCCCG
TTATAGCTCATCGGCTAGGTGTGCTTCTGGGGAAATCACAATCAGCGGCA
ATGGTGCTATCTGTGGCAAAAGCATAGGTGGTGGTGGTTGTGTTGTATAT
CTAGATTATCCCGTTTGACACTCCTCCATAGCGACCAAAACAAGGTCAAC
TTGGGTGTTATCGACCATCGAGTACCGTCTACGAGACGAGCAGCGTGATC
GGGGTAGGATCGTGTTGGGCCTGTGCAGTACGACTCCTTGCGGTTTCACA
TTGTAACTCGGACACTACTAATACTTTGTATCATCATCCCCCGCTCACGC
AGTGGCCGTCGCTGTAGTCTTCACTTTTTTTCGTCATTTTTTCCCGTCTC
AAACCCCGAGAAGGTTGTCGCGACTCTTCCATTTTACATTTCCTTGTGTT
TGTGACGCTGGTCTGTCTGTGGTGGCTTGTGTCTGCACGGGAATGTTGTC
GCTTTGTTCGCAGGCGTGGTGGAAGGTGCTCCCCGACAGGGCATACACGC
GTGTCATGGGCGCTCTGGTGTCGTTGGTGGCGGGCAAGGTTTGCACACCC
GTGCTTGGCGCCAAAGACCTGGGGGAGGAGCAGACGTACGCCCTGCACAG
GATTTTCAAGACCTTGGAGGAAGCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7089:4334..12508-

>mRNA_M-pyrifera_M_contig7089.16919.1 ID=mRNA_M-pyrifera_M_contig7089.16919.1|Name=mRNA_M-pyrifera_M_contig7089.16919.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1758bp|location=Sequence derived from alignment at M-pyrifera_M_contig7089:4334..12508- (Macrocystis pyrifera P11B4 male)
GGAGGGAAGCAGGATTCCTCCGCGGTGAAAACTTTCAGGCTGGAAGCTTG
CCAGGTTTCCACGGTGGCGAAGGCGTTTGTATCTCTCGTCCGCGCAACCC
TCACGGAGGCGTGTTCTGATGAGGGAGGGAAGCAGGATTCCTCCGCGGTG
AAAACTTTCAGGCTGGAAGCTTGCCAGGTTTCCACGGTGGCGAAGGCGTT
TGTATCTCTCGTCCGCGCAACCCTCACGGAGGCGTGTTCTGATGAGGTAC
CTCCTCACTGCGCTAGGGAGCTGTTCCGAACGGCTCGGGACATGTTGGAT
CTCTTCAGGGCGGTACCTCCTCACTGCGCTAGGGAGCTGTTCCGAACGGC
TCGGGACATGTTGGATCTCTTCAGGGCGGTGATCCCTGTCCAGCACGCTA
ATGCCCTCGATGGTGTTCCTCGCATCGCGGCGGTTTTTCAAAACGATTGC
CTCTATTTGGCGCATCACATGGTTACCTTGGGGCATGAGTTCCGCGGAGG
GCTGCCCCCGCCGGCCAATCAGACGGCTACCATGATCGACACCGTCCCCC
TATTCCGAGAACTGGCGACGCAGAGGTGATCCCTGTCCAGCACGCTAATG
CCCTCGATGGTGTTCCTCGCATCGCGGCGGTTTTTCAAAACGATTGCCTC
TATTTGGCGCATCACATGGTTACCTTGGGGCATGAGTTCCGCGGAGGGCT
GCCCCCGCCGGCCAATCAGACGGCTACCATGATCGACACCGTCCCCCTAT
TCCGAGAACTGGCGACGCAGAGCTTGTCGGAGCAGCAGCGGCGGCAACAG
CAACAGCTGCAGGAGTTCTTCGCTGACGTCGATGTCCTGGCTTCCACTGA
GACTTCCGCCCCTCTTCTAGAACCCGCAGACTCTGCCTTCGAAGGCATGT
TCCCCGGGGATGATGCGAAAGCTGCCCGCGGGGGGAGAGGTGGTCTTGAC
AGGGGTTGGATGGCTGCTGGCAGGAAGGGCGGAGGTGGAGGCGCCGGTGG
GGGTGAGGTGGAGGCATCGGCGTATGGGGGTGATGCGGGGGAGGAAGGGA
GAGCGGCGGCGGCGGTGCGGAAATCTGTGTATCATTTGCGACAGCTCCGA
CAGCTTGTCGGAGCAGCAGCGGCGGCAACAGCAACAGCTGCAGGAGTTCT
TCGCTGACGTCGATGTCCTGGCTTCCACTGAGACTTCCGCCCCTCTTCTA
GAACCCGCAGACTCTGCCTTCGAAGGCATGTTCCCCGGGGATGATGCGAA
AGCTGCCCGCGGGGGGAGAGGTGGTCTTGACAGGGGTTGGATGGCTGCTG
GCAGGAAGGGCGGAGGTGGAGGCGCCGGTGGGGGTGAGGTGGAGGCATCG
GCGTATGGGGGTGATGCGGGGGAGGAAGGGAGAGCGGCGGCGGCGGTGCG
GAAATCTGTGTATCATTTGCGACAGCTCCGACAGGCGTGGTGGAAGGTGC
TCCCCGACAGGGCATACACGCGTGTCATGGGCGCTCTGGTGTCGTTGGTG
GCGGGCAAGGTTTGCACACCCGTGCTTGGCGCCAAAGACCTGGGGGAGGA
GCAGACGTACGCCCTGCACAGGATTTTCAAGACCTTGGAGGAAGCGGCGT
GGTGGAAGGTGCTCCCCGACAGGGCATACACGCGTGTCATGGGCGCTCTG
GTGTCGTTGGTGGCGGGCAAGGTTTGCACACCCGTGCTTGGCGCCAAAGA
CCTGGGGGAGGAGCAGACGTACGCCCTGCACAGGATTTTCAAGACCTTGG
AGGAAGCG
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