mRNA_M-pyrifera_M_contig7088.16918.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7088.16918.1 vs. uniprot
Match: A0A6H5JIE6_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIE6_9PHAE) HSP 1 Score: 183 bits (465), Expect = 4.250e-56 Identity = 103/116 (88.79%), Postives = 110/116 (94.83%), Query Frame = 1
Query: 1 MGLGQRKSKGGKGGHRTKNKXXXXXXXXXXRRKDVDQIQDELAVEEEKGEETVFDVDDDLPGQGQFYCTPCSRHFTDAKTKGTHLTAKLHKRRMKDVAQEQYTQAEAERAAGMTRE 348
MGLGQRKSKGGKGGH+TKNKXXXXXXXXXXRRKDVDQIQDEL VEEEKGEE VF+VDDDLPGQGQFYCTPC+RHFTD +TK TH+ +KLHKRRMKDVAQEQYTQAEAER AGMT+E
Sbjct: 1 MGLGQRKSKGGKGGHKTKNKXXXXXXXXXXRRKDVDQIQDELMVEEEKGEEMVFEVDDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKE 116
BLAST of mRNA_M-pyrifera_M_contig7088.16918.1 vs. uniprot
Match: A0A836CC06_9STRA (C2H2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC06_9STRA) HSP 1 Score: 127 bits (318), Expect = 2.970e-34 Identity = 67/122 (54.92%), Postives = 81/122 (66.39%), Query Frame = 1
Query: 1 MGLGQRKSKGGKGGHRTKNKXXXXXXXXXXRRKDVDQIQDELAVEEEKGEETVFDVDDDLPGQGQFYCTPCSRHFTDAKTKGTHLTAKLHKRRMKDVAQEQYTQAEAERAAGMTREKYPPAH 366
MG+GQ+KSKG G +TKNK R D+DQ+QD L E G+ F DDDLPG GQFYC PC+RHFTD T TH +KLHKRR+KDVAQ++YTQ EA+ AG ++E Y PAH
Sbjct: 1 MGIGQKKSKGTSKGSKTKNKQYKRALDTKRRPMDIDQVQDILEKVAETGKPLKFAYDDDLPGGGQFYCAPCARHFTDQGTLDTHTKSKLHKRRLKDVAQKKYTQKEADAGAGKSKEVYAPAH 122
BLAST of mRNA_M-pyrifera_M_contig7088.16918.1 vs. uniprot
Match: A0A024UJ99_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJ99_9STRA) HSP 1 Score: 123 bits (309), Expect = 3.350e-33 Identity = 65/116 (56.03%), Postives = 79/116 (68.10%), Query Frame = 1
Query: 19 KSKGGKGGHRTKNKXXXXXXXXXXRRKDVDQIQDELAVEEEKGEETVFDVDDDLPGQGQFYCTPCSRHFTDAKTKGTHLTAKLHKRRMKDVAQEQYTQAEAERAAGMTREKYPPAH 366
K KG K H TK+ R +D+DQIQD+L EEE G + F++D+DLPG GQ+YCTPC RHF A + H+ +K+HKRRMKDVAQEQYTQ EAERAAG + E Y PAH
Sbjct: 14 KKKGYKRAHATKS-----------RSRDIDQIQDDLKKEEETGVKMTFELDEDLPGLGQYYCTPCGRHFITANARDVHIASKVHKRRMKDVAQEQYTQKEAERAAGKSIETYTPAH 118
BLAST of mRNA_M-pyrifera_M_contig7088.16918.1 vs. uniprot
Match: A0A8K1FHU3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHU3_PYTOL) HSP 1 Score: 122 bits (306), Expect = 1.040e-32 Identity = 64/109 (58.72%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 34 KGGHRTKNKXXXXXXXXXXRRKDVDQIQDELAVEEEKGEETVFDVDDDLPGQGQFYCTPCSRHFTDAKTKGTHLTAKLHKRRMKDVAQEQYTQAEAERAAGMTREKYPP 360
KG H K K R +D+DQIQD+L +E+ G+ F+VD+DLPG GQ+YCTPC RHF DAKT+ H+ KLHKRRMKDVAQEQYTQAEAE AG + EKY P
Sbjct: 9 KGAHAKKTKYKRSHATKC-RGRDIDQIQDDLKLEKLSGKAMSFEVDEDLPGLGQYYCTPCGRHFIDAKTRDVHIKGKLHKRRMKDVAQEQYTQAEAEAGAGRSVEKYVP 116
BLAST of mRNA_M-pyrifera_M_contig7088.16918.1 vs. uniprot
Match: A0A1V9ZQ49_9STRA (C2H2-type domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQ49_9STRA) HSP 1 Score: 120 bits (302), Expect = 4.570e-32 Identity = 64/114 (56.14%), Postives = 77/114 (67.54%), Query Frame = 1
Query: 19 KSKGGKGGHRTKNKXXXXXXXXXXRRKDVDQIQDELAVEEEKGEETVFDVDDDLPGQGQFYCTPCSRHFTDAKTKGTHLTAKLHKRRMKDVAQEQYTQAEAERAAGMTREKYPP 360
K KG K GH TK+ R +D+DQIQD+L E+ G+ F +D+DLPG GQFYCTPC RHF DA + HL +K+HKRRMKDVAQEQY+Q EA+RAAG T E Y P
Sbjct: 14 KKKGYKRGHATKS-----------RNRDIDQIQDDLKKEQLTGKSMTFQIDEDLPGLGQFYCTPCGRHFMDAVARAVHLKSKVHKRRMKDVAQEQYSQKEADRAAGKTIETYVP 116
BLAST of mRNA_M-pyrifera_M_contig7088.16918.1 vs. uniprot
Match: A0A329S597_9STRA (C2H2-type domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S597_9STRA) HSP 1 Score: 120 bits (301), Expect = 6.470e-32 Identity = 65/116 (56.03%), Postives = 77/116 (66.38%), Query Frame = 1
Query: 19 KSKGGKGGHRTKNKXXXXXXXXXXRRKDVDQIQDELAVEEEKGEETVFDVDDDLPGQGQFYCTPCSRHFTDAKTKGTHLTAKLHKRRMKDVAQEQYTQAEAERAAGMTREKYPPAH 366
K K K GH TKN R +D+DQIQD+L+VE+ G+ F+ D+DLPG GQFYCTPC RHF DAKT+ HL K+HKRR+KDVAQ+QYTQ EA AG E Y PAH
Sbjct: 16 KKKQYKRGHATKN-----------RARDIDQIQDDLSVEKMTGKSMAFEEDEDLPGLGQFYCTPCGRHFIDAKTRDVHLKTKVHKRRLKDVAQKQYTQNEAMEGAGKGIETYKPAH 120
BLAST of mRNA_M-pyrifera_M_contig7088.16918.1 vs. uniprot
Match: A0A485LT70_9STRA (Aste57867_25424 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LT70_9STRA) HSP 1 Score: 120 bits (300), Expect = 7.910e-32 Identity = 64/118 (54.24%), Postives = 78/118 (66.10%), Query Frame = 1
Query: 19 KSKGGKGGHRTKNKXXXXXXXXXXRRKDVDQIQDELAVEEEKGEETVFDVDDDLPGQGQFYCTPCSRHFTDAKTKGTHLTAKLHKRRMKDVAQEQYTQAEAERAAGMTREKYPPAHGA 372
K KG K H T N R +D+DQIQD+L E+E G++ FD+D+DLPG GQ+YCTPC RHF A + H+ +K+HKRRMKDVAQEQYTQ EAERAAG + E Y P A
Sbjct: 14 KKKGYKRAHATCN-----------RSRDIDQIQDDLKKEQELGQKMTFDMDEDLPGLGQYYCTPCGRHFITANARDVHIVSKVHKRRMKDVAQEQYTQKEAERAAGKSVETYVPVRAA 120
BLAST of mRNA_M-pyrifera_M_contig7088.16918.1 vs. uniprot
Match: W4G9A2_9STRA (C2H2-type domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9A2_9STRA) HSP 1 Score: 120 bits (300), Expect = 8.390e-32 Identity = 65/123 (52.85%), Postives = 79/123 (64.23%), Query Frame = 1
Query: 19 KSKGGKGGHRTKNKXXXXXXXXXXRRKDVDQIQDELAVEEEKGEETVFDVDDDLPGQGQFYCTPCSRHFTDAKTKGTHLTAKLHKRRMKDVAQEQYTQAEAERAAGMTREKYPPAHGARALIA 387
K KG K H TK+ R +D+DQIQD+L E G + F+ D+DLPG GQFYCTPC RHF A + H+ +K+HKRR+KDVAQEQYTQ EAERAAG + E Y PAH A +A
Sbjct: 14 KKKGYKRAHATKS-----------RSRDIDQIQDDLKKEVATGAKIAFEADEDLPGLGQFYCTPCGRHFITANARDVHIVSKVHKRRLKDVAQEQYTQNEAERAAGKSIEAYTPAHAPAAAVA 125
BLAST of mRNA_M-pyrifera_M_contig7088.16918.1 vs. uniprot
Match: A0A662Y0F3_9STRA (C2H2-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0F3_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.260e-31 Identity = 64/111 (57.66%), Postives = 75/111 (67.57%), Query Frame = 1
Query: 34 KGGHRTKNKXXXXXXXXXXRRKDVDQIQDELAVEEEKGEETVFDVDDDLPGQGQFYCTPCSRHFTDAKTKGTHLTAKLHKRRMKDVAQEQYTQAEAERAAGMTREKYPPAH 366
K GH TKN R +DVDQIQD+L VE+ KG+ F+ D+DLPG GQFYCTPC RHF DA T+ H+ K+HKRR+KDVAQ+QYTQ EA AG T E Y PAH
Sbjct: 20 KRGHATKN-----------RSRDVDQIQDDLRVEKLKGKPLAFEEDEDLPGLGQFYCTPCGRHFIDAITRDVHIKTKVHKRRLKDVAQKQYTQKEAMLGAGKTVETYTPAH 119
BLAST of mRNA_M-pyrifera_M_contig7088.16918.1 vs. uniprot
Match: W2FRC2_PHYPR (C2H2-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2FRC2_PHYPR) HSP 1 Score: 119 bits (299), Expect = 1.300e-31 Identity = 65/116 (56.03%), Postives = 77/116 (66.38%), Query Frame = 1
Query: 19 KSKGGKGGHRTKNKXXXXXXXXXXRRKDVDQIQDELAVEEEKGEETVFDVDDDLPGQGQFYCTPCSRHFTDAKTKGTHLTAKLHKRRMKDVAQEQYTQAEAERAAGMTREKYPPAH 366
K K K GH TKN R +D+DQIQD+L VE+ G+ F+ D+DLPG GQFYCTPC RHF DAKT+ HL K+HKRR+KDVAQ+QYTQ EA + AG E Y PAH
Sbjct: 16 KKKQYKRGHATKN-----------RARDIDQIQDDLRVEKLTGKSMAFEEDEDLPGLGQFYCTPCGRHFIDAKTRDVHLKTKVHKRRLKDVAQKQYTQNEAMQGAGKGVETYKPAH 120 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7088.16918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7088.16918.1 >prot_M-pyrifera_M_contig7088.16918.1 ID=prot_M-pyrifera_M_contig7088.16918.1|Name=mRNA_M-pyrifera_M_contig7088.16918.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp MGLGQRKSKGGKGGHRTKNKEYKKGHATKNRRKDVDQIQDELAVEEEKGEback to top mRNA from alignment at M-pyrifera_M_contig7088:8320..10846- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7088.16918.1 ID=mRNA_M-pyrifera_M_contig7088.16918.1|Name=mRNA_M-pyrifera_M_contig7088.16918.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2527bp|location=Sequence derived from alignment at M-pyrifera_M_contig7088:8320..10846- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7088:8320..10846- >mRNA_M-pyrifera_M_contig7088.16918.1 ID=mRNA_M-pyrifera_M_contig7088.16918.1|Name=mRNA_M-pyrifera_M_contig7088.16918.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig7088:8320..10846- (Macrocystis pyrifera P11B4 male)back to top |