mRNA_M-pyrifera_M_contig70845.16910.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig70845.16910.1
Unique NamemRNA_M-pyrifera_M_contig70845.16910.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig70845.16910.1 vs. uniprot
Match: F2E5V4_HORVV (Predicted protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2E5V4_HORVV)

HSP 1 Score: 170 bits (430), Expect = 5.280e-48
Identity = 83/159 (52.20%), Postives = 108/159 (67.92%), Query Frame = 1
Query:   64 LRVVILPAQHNSHRWLWDRNQTLWGSFGVVGEKSRYFFAGDTGYRNAET-------------VCPVFAEIGERVGPFDLASIPIGAYDPRFVMEPIHADPDDAADIHIDIRSKQSIGMHWGTWRLTYEPTLEPPKKLKKAIEARNLPQESFQAPLPGTT 501
            +RVV  P QH S R L+DR+ TLW S+ +VG   R++FAGDTGYR+                +CPVF +IGE++GPFDLA IPIGAY PR+ M P+H +P DA D+H+DIRSKQS+GMHWGT+ L+ EP LEPP +L   ++A+ LP + F A   G T
Sbjct:  257 VRVVCTPCQHFSGRSLFDRDATLWASWSLVGPTKRFYFAGDTGYRSVPEGVEDSQLEALNLPICPVFKDIGEKLGPFDLACIPIGAYIPRWFMSPVHCNPRDAVDLHVDIRSKQSVGMHWGTFVLSDEPVLEPPVQLALELQAKALPLDQFVALRHGQT 415          
BLAST of mRNA_M-pyrifera_M_contig70845.16910.1 vs. uniprot
Match: A0A7R9PZ26_9ACAR (N-acetylphosphatidylethanolamine-hydrolyzing phospholipase D n=2 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9PZ26_9ACAR)

HSP 1 Score: 163 bits (412), Expect = 8.100e-46
Identity = 76/138 (55.07%), Postives = 99/138 (71.74%), Query Frame = 1
Query:   64 LRVVILPAQHNSHRWLWDRNQTLWGSFGVVGEKSRYFFAGDTGYRNAETVCPVFAEIGERVGPFDLASIPIGAYDPRFVMEPIHADPDDAADIHIDIRSKQSIGMHWGTWRLTYEPTLEPPKKLKKAIEARNLPQESF 477
            ++  + PAQH + R LWD  Q LWGS+ VVG K R+FFAGDTGY      CPVF +IG+  GPFDL++IPIGAY+PR++M P H DP++A  IH DIRSK S+G+HWGT+ + +E  LEPP KLK A++  NL +  F
Sbjct:  229 IQFTLTPAQHWTQRGLWDGMQVLWGSWTVVGPKHRFFFAGDTGY------CPVFKQIGQMYGPFDLSAIPIGAYEPRWIMTPEHIDPEEAVQIHEDIRSKVSVGIHWGTFVMAHEYYLEPPMKLKTALKDHNLDENEF 360          
BLAST of mRNA_M-pyrifera_M_contig70845.16910.1 vs. uniprot
Match: A0A0S7F6N3_9TELE (N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7F6N3_9TELE)

HSP 1 Score: 158 bits (400), Expect = 5.490e-45
Identity = 76/135 (56.30%), Postives = 96/135 (71.11%), Query Frame = 1
Query:   73 VILPAQHNSHRWLWDRNQTLWGSFGVVGEKSRYFFAGDTGYRNAETVCPVFAEIGERVGPFDLASIPIGAYDPRFVMEPIHADPDDAADIHIDIRSKQSIGMHWGTWRLTYEPTLEPPKKLKKAIEARNLPQESF 477
            V  P+QH S R  WD N++LWGS+ V+G   R+FFAGDTGY      CP F EIG R GPFDLA+IPIGAY PR VM+  H DP++A  IH D+++KQS+ +HWGT+ L YE  LEPP +L++A+E R L  ESF
Sbjct:  133 VCTPSQHWSKRTAWDDNRSLWGSWSVLGPNHRFFFAGDTGY------CPSFQEIGRRFGPFDLAAIPIGAYLPRDVMKGQHVDPEEAVQIHQDLQAKQSVAIHWGTFALAYEHYLEPPVRLREALEQRGLKPESF 261          
BLAST of mRNA_M-pyrifera_M_contig70845.16910.1 vs. uniprot
Match: A0A7R9KQP5_9ACAR (N-acetylphosphatidylethanolamine-hydrolyzing phospholipase D n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9KQP5_9ACAR)

HSP 1 Score: 157 bits (397), Expect = 9.050e-45
Identity = 74/138 (53.62%), Postives = 98/138 (71.01%), Query Frame = 1
Query:   64 LRVVILPAQHNSHRWLWDRNQTLWGSFGVVGEKSRYFFAGDTGYRNAETVCPVFAEIGERVGPFDLASIPIGAYDPRFVMEPIHADPDDAADIHIDIRSKQSIGMHWGTWRLTYEPTLEPPKKLKKAIEARNLPQESF 477
            ++ ++ PAQH + R L D  + LWGS+ VVG K R+FFAGDTGY      C VF +IG+  GPFDL++IPIGAY+PR++MEP H DP+ A  IH DIRSK S+G+HWGT+ L +E  LEPP KLK +++  NL +  F
Sbjct:  119 IQFILTPAQHWTRRSLSDERKVLWGSWTVVGPKHRFFFAGDTGY------CSVFKQIGQMYGPFDLSAIPIGAYEPRWLMEPQHVDPEQAVQIHEDIRSKLSVGIHWGTFALAHEYYLEPPMKLKTSLKEHNLDENEF 250          
BLAST of mRNA_M-pyrifera_M_contig70845.16910.1 vs. uniprot
Match: A0A7R9MB10_9ACAR (N-acetylphosphatidylethanolamine-hydrolyzing phospholipase D n=1 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9MB10_9ACAR)

HSP 1 Score: 158 bits (400), Expect = 1.020e-44
Identity = 74/138 (53.62%), Postives = 97/138 (70.29%), Query Frame = 1
Query:   64 LRVVILPAQHNSHRWLWDRNQTLWGSFGVVGEKSRYFFAGDTGYRNAETVCPVFAEIGERVGPFDLASIPIGAYDPRFVMEPIHADPDDAADIHIDIRSKQSIGMHWGTWRLTYEPTLEPPKKLKKAIEARNLPQESF 477
            ++  + PAQH + R L D  + LWGS+ V+G K R+FFAGDTGY      CPVF +IG+  GPFDL++IPIGAY+PR++MEP H DP+ A  IH DIRSK S+G+HWGT+ L +E  LEPP KLK ++   NL +  F
Sbjct:  163 IQFTLTPAQHWTRRGLTDERKVLWGSWTVIGPKHRFFFAGDTGY------CPVFKQIGQMYGPFDLSAIPIGAYEPRWLMEPQHVDPEQAVQIHEDIRSKLSVGVHWGTFALAHEYYLEPPMKLKTSLNEHNLNETEF 294          
BLAST of mRNA_M-pyrifera_M_contig70845.16910.1 vs. uniprot
Match: UPI001FEFE8FF (MBL fold metallo-hydrolase n=1 Tax=Flagellatimonas centrodinii TaxID=2806210 RepID=UPI001FEFE8FF)

HSP 1 Score: 157 bits (398), Expect = 2.620e-44
Identity = 77/147 (52.38%), Postives = 99/147 (67.35%), Query Frame = 1
Query:   64 LRVVILPAQHNSHRWLWDRNQTLWGSFGVVGEKSRYFFAGDTGYRNAETVCPVFAEIGERVGPFDLASIPIGAYDPRFVMEPIHADPDDAADIHIDIRSKQSIGMHWGTWRLTYEPTLEPPKKLKKAIEARNLPQESFQAPLPGTTV 504
            L V ++PAQH S R   DRN TLWG F    + ++ +FAGDTGY       P FA+IG R+GP DL+ IPIGAYDPR  M P+H DP++A  IH+D+RSK+S+ MHWGT+RLT EP  EPP +L +A  A  L   +F  P+PG T+
Sbjct:  173 LNVRLVPAQHFSGRGAGDRNATLWGGFVFEADGAKVYFAGDTGYS------PDFADIGRRLGPIDLSLIPIGAYDPRQFMRPMHIDPEEAVQIHLDVRSKRSLAMHWGTFRLTLEPLDEPPVRLGRARAAAGLADSAFTVPVPGETL 313          
BLAST of mRNA_M-pyrifera_M_contig70845.16910.1 vs. uniprot
Match: C5PA38_COCP7 (Lactamase_B domain-containing protein n=8 Tax=Coccidioides TaxID=5500 RepID=C5PA38_COCP7)

HSP 1 Score: 159 bits (402), Expect = 3.030e-44
Identity = 76/149 (51.01%), Postives = 96/149 (64.43%), Query Frame = 1
Query:   61 LLRVVILPAQHNSHRWLWDRNQTLWGSFGVVGEKSRYFFAGDTGYRNAETV---------------CPVFAEIGERVGPFDLASIPIGAYDPRFVMEPIHADPDDAADIHIDIRSKQSIGMHWGTWRLTYEPTLEPPKKLKKAIEARNL 462
            L R+  LP QH S R LWDR+QTLWGS+ V    S+ +FAGDTGYR+   +               CP FA++G+  GPF L  IPIGAYDPRF+M P+HADP DA +I  D + + ++GMHWGTW LT E  LEPP+KLKKA+    +
Sbjct:  215 LARIGCLPCQHISARTLWDRSQTLWGSWSVESGSSKVYFAGDTGYRSVPELPKEVDDYGPGHNYPHCPAFAQVGQYRGPFTLGLIPIGAYDPRFIMSPMHADPHDAVNIFKDTKCQNALGMHWGTWVLTEEDVLEPPRKLKKALRQNGI 363          
BLAST of mRNA_M-pyrifera_M_contig70845.16910.1 vs. uniprot
Match: UPI00189C4399 (N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D n=1 Tax=Nematolebias whitei TaxID=451745 RepID=UPI00189C4399)

HSP 1 Score: 157 bits (397), Expect = 3.790e-44
Identity = 74/135 (54.81%), Postives = 95/135 (70.37%), Query Frame = 1
Query:   73 VILPAQHNSHRWLWDRNQTLWGSFGVVGEKSRYFFAGDTGYRNAETVCPVFAEIGERVGPFDLASIPIGAYDPRFVMEPIHADPDDAADIHIDIRSKQSIGMHWGTWRLTYEPTLEPPKKLKKAIEARNLPQESF 477
            V  PAQH S R  WD N++LW S+ V+G   R+FFAGDTGY      CP F EIG R GPFDLA+IPIGAY PR++M   H DP++A  IH D+++KQS+ +HWGT+ L YE  LEPP +L++A+E + L  ESF
Sbjct:  168 VCSPAQHWSKRTAWDDNKSLWSSWSVLGPSFRFFFAGDTGY------CPSFQEIGRRFGPFDLAAIPIGAYHPRYMMRGQHVDPEEAVQIHQDLQAKQSVAIHWGTFALAYENYLEPPVRLREALEQKGLKAESF 296          
BLAST of mRNA_M-pyrifera_M_contig70845.16910.1 vs. uniprot
Match: A0A8H7RA45_9FUNG (Lactamase_B domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7RA45_9FUNG)

HSP 1 Score: 158 bits (400), Expect = 5.500e-44
Identity = 86/167 (51.50%), Postives = 105/167 (62.87%), Query Frame = 1
Query:   64 LRVVILPAQHNSHRWLWDRNQTLWGSFGVV----GEKSRYFFAGDTGYRN--AETV---------------CPVFAEIGERVGPFDLASIPIGAYDPRFVMEPIHADPDDAADIHIDIRSKQSIGMHWGTWRLTYEPTLEPPKKLKKAIEARNLPQESFQA-PLPGT 498
            L +   P QH S R L+DRN+TLW S+ +     GE  + FF GDTGYR   A+T                CP F EIGE++GPFDLA IPIGAY PR+ M PIH  P+DA ++H DI+SKQSIG+HWGT+ LT EP  EPPK+LK A+E R L  + F   PL GT
Sbjct:  205 LTMTCTPCQHFSGRGLFDRNKTLWASWCIQAQKDGEVQKVFFGGDTGYRAVPADTKPEFQYDTQYLDTLPHCPAFKEIGEKMGPFDLAFIPIGAYSPRWFMSPIHCSPEDAVELHCDIKSKQSIGIHWGTFILTDEPLFEPPKRLKAAMEKRGLDAQHFNVLPLGGT 371          
BLAST of mRNA_M-pyrifera_M_contig70845.16910.1 vs. uniprot
Match: C4JYL9_UNCRE (Lactamase_B domain-containing protein n=1 Tax=Uncinocarpus reesii (strain UAMH 1704) TaxID=336963 RepID=C4JYL9_UNCRE)

HSP 1 Score: 158 bits (400), Expect = 8.440e-44
Identity = 79/153 (51.63%), Postives = 101/153 (66.01%), Query Frame = 1
Query:   61 LLRVVILPAQHNSHRWLWDRNQTLWGSFGVVGEKSRYFFAGDTGYR---------------NAETVCPVFAEIGERVGPFDLASIPIGAYDPRFVMEPIHADPDDAADIHIDIRSKQSIGMHWGTWRLTYEPTLEPPKKLKKAIEARNLPQES 474
            L R+  LP QH S R LWDR++TLWGS+ V    S+ +FAGDTGYR               +A   CP FA++G+  GPF L  IPIGAYDPRF+M P+HADP DA  I  D + ++++GMHWGTW LT E  +EPPKKLK+A++ RN  QE+
Sbjct:  231 LARIGCLPCQHTSARTLWDRSKTLWGSWSVESANSKVYFAGDTGYRAVPELPKEVDDHGPEHAYPHCPAFAQVGQLRGPFTLGLIPIGAYDPRFIMSPMHADPHDAVKIFQDTKCQRALGMHWGTWVLTEEDVMEPPKKLKEALK-RNDVQET 382          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70845.16910.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F2E5V4_HORVV5.280e-4852.20Predicted protein n=1 Tax=Hordeum vulgare subsp. v... [more]
A0A7R9PZ26_9ACAR8.100e-4655.07N-acetylphosphatidylethanolamine-hydrolyzing phosp... [more]
A0A0S7F6N3_9TELE5.490e-4556.30N-acyl-phosphatidylethanolamine-hydrolyzing phosph... [more]
A0A7R9KQP5_9ACAR9.050e-4553.62N-acetylphosphatidylethanolamine-hydrolyzing phosp... [more]
A0A7R9MB10_9ACAR1.020e-4453.62N-acetylphosphatidylethanolamine-hydrolyzing phosp... [more]
UPI001FEFE8FF2.620e-4452.38MBL fold metallo-hydrolase n=1 Tax=Flagellatimonas... [more]
C5PA38_COCP73.030e-4451.01Lactamase_B domain-containing protein n=8 Tax=Cocc... [more]
UPI00189C43993.790e-4454.81N-acyl-phosphatidylethanolamine-hydrolyzing phosph... [more]
A0A8H7RA45_9FUNG5.500e-4451.50Lactamase_B domain-containing protein n=1 Tax=Muco... [more]
C4JYL9_UNCRE8.440e-4451.63Lactamase_B domain-containing protein n=1 Tax=Unci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70845contigM-pyrifera_M_contig70845:358..882 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score161.8
Seed ortholog evalue3e-37
Seed eggNOG ortholog199306.XP_003068745.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Beta-lactamase superfamily domain
EggNOG OGs20CK9@147545,39UP3@33154,3B3IA@33183,3FQZ2@34383,3NX7Q@4751,3QQ6X@4890,COG2220@1,KOG3798@2759
COG Functional cat.S
Best tax levelOnygenales
Best eggNOG OGNA|NA|NA
Exons1
Model size525
Cds size525
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816602.3108695-CDS-M-pyrifera_M_contig70845:357..8821622816602.3108695-CDS-M-pyrifera_M_contig70845:357..882Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70845 358..882 -
1692278071.2972772-CDS-M-pyrifera_M_contig70845:357..8821692278071.2972772-CDS-M-pyrifera_M_contig70845:357..882Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70845 358..882 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70845.16910.1prot_M-pyrifera_M_contig70845.16910.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig70845 358..882 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig70845.16910.1

>prot_M-pyrifera_M_contig70845.16910.1 ID=prot_M-pyrifera_M_contig70845.16910.1|Name=mRNA_M-pyrifera_M_contig70845.16910.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp
PSPTSTQHPSSSSSSLSSSSLLRVVILPAQHNSHRWLWDRNQTLWGSFGV
VGEKSRYFFAGDTGYRNAETVCPVFAEIGERVGPFDLASIPIGAYDPRFV
MEPIHADPDDAADIHIDIRSKQSIGMHWGTWRLTYEPTLEPPKKLKKAIE
ARNLPQESFQAPLPGTTVLANTER*
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mRNA from alignment at M-pyrifera_M_contig70845:358..882-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig70845.16910.1 ID=mRNA_M-pyrifera_M_contig70845.16910.1|Name=mRNA_M-pyrifera_M_contig70845.16910.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig70845:358..882- (Macrocystis pyrifera P11B4 male)
CCGTCTCCAACTTCAACACAACACCCCTCTTCTTCATCTTCTTCATTATC TTCTTCTTCTTTGCTACGAGTTGTGATCCTCCCAGCGCAGCACAATTCAC ACAGGTGGTTGTGGGATCGGAATCAAACATTGTGGGGTTCGTTTGGAGTT GTTGGAGAGAAGAGTCGGTATTTTTTTGCCGGAGATACTGGATATCGAAA TGCTGAGACTGTATGCCCTGTGTTTGCAGAGATTGGGGAGAGGGTTGGTC CGTTTGATCTTGCTTCTATTCCAATTGGGGCATACGACCCAAGGTTTGTC ATGGAACCAATTCACGCAGATCCTGATGATGCTGCTGATATCCATATTGA TATCCGTAGCAAGCAATCCATTGGAATGCATTGGGGTACATGGAGACTCA CTTATGAACCTACACTAGAGCCACCAAAAAAGTTGAAAAAGGCGATCGAA GCAAGAAATCTACCGCAAGAATCTTTCCAAGCACCTCTCCCAGGCACAAC AGTGCTTGCAAACACTGAAAGATAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig70845:358..882-

>mRNA_M-pyrifera_M_contig70845.16910.1 ID=mRNA_M-pyrifera_M_contig70845.16910.1|Name=mRNA_M-pyrifera_M_contig70845.16910.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig70845:358..882- (Macrocystis pyrifera P11B4 male)
CCGTCTCCAACTTCAACACAACACCCCTCTTCTTCATCTTCTTCATTATC
TTCTTCTTCTTTGCTACGAGTTGTGATCCTCCCAGCGCAGCACAATTCAC
ACAGGTGGTTGTGGGATCGGAATCAAACATTGTGGGGTTCGTTTGGAGTT
GTTGGAGAGAAGAGTCGGTATTTTTTTGCCGGAGATACTGGATATCGAAA
TGCTGAGACTGTATGCCCTGTGTTTGCAGAGATTGGGGAGAGGGTTGGTC
CGTTTGATCTTGCTTCTATTCCAATTGGGGCATACGACCCAAGGTTTGTC
ATGGAACCAATTCACGCAGATCCTGATGATGCTGCTGATATCCATATTGA
TATCCGTAGCAAGCAATCCATTGGAATGCATTGGGGTACATGGAGACTCA
CTTATGAACCTACACTAGAGCCACCAAAAAAGTTGAAAAAGGCGATCGAA
GCAAGAAATCTACCGCAAGAATCTTTCCAAGCACCTCTCCCAGGCACAAC
AGTGCTTGCAAACACTGAAAGATAGCCGTCTCCAACTTCAACACAACACC
CCTCTTCTTCATCTTCTTCATTATCTTCTTCTTCTTTGCTACGAGTTGTG
ATCCTCCCAGCGCAGCACAATTCACACAGGTGGTTGTGGGATCGGAATCA
AACATTGTGGGGTTCGTTTGGAGTTGTTGGAGAGAAGAGTCGGTATTTTT
TTGCCGGAGATACTGGATATCGAAATGCTGAGACTGTATGCCCTGTGTTT
GCAGAGATTGGGGAGAGGGTTGGTCCGTTTGATCTTGCTTCTATTCCAAT
TGGGGCATACGACCCAAGGTTTGTCATGGAACCAATTCACGCAGATCCTG
ATGATGCTGCTGATATCCATATTGATATCCGTAGCAAGCAATCCATTGGA
ATGCATTGGGGTACATGGAGACTCACTTATGAACCTACACTAGAGCCACC
AAAAAAGTTGAAAAAGGCGATCGAAGCAAGAAATCTACCGCAAGAATCTT
TCCAAGCACCTCTCCCAGGCACAACAGTGCTTGCAAACACTGAAAGATAG
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