mRNA_M-pyrifera_M_contig7058.16846.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7058.16846.1
Unique NamemRNA_M-pyrifera_M_contig7058.16846.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig7058.16846.1 vs. uniprot
Match: A0A6H5JHI2_9PHAE (FAD-binding FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI2_9PHAE)

HSP 1 Score: 630 bits (1624), Expect = 4.280e-214
Identity = 351/663 (52.94%), Postives = 438/663 (66.06%), Query Frame = 1 
Query:   13 VTVVVALSNVAALWIQRYDASSGKLCSFGDKNACVTSVVSKVLLTIARLSAGALFPSIACCVLSKCYATRYFLHHSWLTLIVDLEPTHPLHTYFGVVTLVCSLIHTVAHVARAFYESHLNNLYGDEINLSGLAAMLLLLPVALPMMIEYIKTK--------------------------------MTYELRKFMHMLFIPFIVAICFHGSVLRTLGTLLLVWYVVDRLYFTTKMTFFIERPIFKSVGRGTLVRFELPTGYQFKPGAYVQVNCPAISASEWHPFSIFPVPGPTTRAGFHVEAVGNWTEQLFRLALEDPRMPLWITAAQPSVLEQTLYYDNVVLVCSGAGITPAVSVAERFAKKKNVHLLWLSREAGMVAMFEKQLHRVKSTVYLTGKPTAKTKKRIIDLLAPSRAEVVAKNAYCPSSKTASRASSASDLTVLEDGALAD---------TASFLDYRGTFRDDEEG--KTERAT----DDGQDESIFGESLLGGSSFRGSSYGGRDG-----------------DRDTKVIERESEDTNTASGHGRHRRRPSMGQNGRSRGLHPVSLNFGRPKIEDFIAETIQGTAVVAEWAGQQGPLLPANEPRAP----------PT--NLRQVMSRLNTNQRISKMDLMSADLSIVEAKPSK 1773
            +T+ +AL NV  LW   YD  +G+LCS  ++ ACVTS     L+T+ARL+AGALFPSI  CVL+KCYATRY LHHSWLTLI+D EP+H LHTYFGV+ L+CS++H+  H+A    +   +  + +EIN SG+ AMLLLLP+ALPM +   K K                                +T+E+RK++H+LF+PF++A+CFHG  L+ LG +LL WY++DRLYFTTKMTF +  P++K VGRGTLVRFELP GYQ+KPGAYVQVNCPAIS SEWHPFS+FPVPGP  RAGFHVEAVG+WT ++FR  LE+P+MPLWITAAQPSV+E+T+Y++NV+LVC+GAGITPAVSVAERF KKKN+HLLW  R+AGMVAMFEKQL RVKSTV+LTGKPT KTKKR++DLLAPSR +VVA  A   +S+++S     +    LEDG              A   DY G  +DD EG  +TER +    DDG D S+ G S  GG S      GGR                   +R      R +E+  TA+   RH  +PS GQ  R+RG HPVSLNFGRP I  FI  T++GTAVVA+WA       P  E R            PT   LRQ+++RLNT QRISK DLM ADL++V    +K
Sbjct:  220 ITLAIALVNVVTLWGWHYDTRAGRLCSIRNRRACVTSGPEMALITVARLTAGALFPSIIFCVLAKCYATRYLLHHSWLTLIIDFEPSHKLHTYFGVLILLCSVVHSACHIAVGALQRRADYAFENEINRSGVVAMLLLLPIALPMTMRLAKAKVPEEVYRSLAPTGFSLPRVVARCFARDNETPQLTFEVRKYLHLLFMPFMIAVCFHGRALQILGAILLAWYLLDRLYFTTKMTFLLSSPVYKPVGRGTLVRFELPPGYQYKPGAYVQVNCPAISVSEWHPFSLFPVPGPRPRAGFHVEAVGDWTNEMFRFCLENPQMPLWITAAQPSVMEKTVYFENVLLVCTGAGITPAVSVAERFQKKKNIHLLWCCRDAGMVAMFEKQLRRVKSTVFLTGKPTNKTKKRMVDLLAPSRGDVVAATAGTSTSRSSSLRGDPA--CALEDGRGGGGGGPECSNLNADLDDYLGVLKDDFEGSGRTERGSLDGDDDGGDGSVMGYSAWGGDSI----LGGRXXXXXXXXXXXXXXXXXXMERTEAAAARRAEEERTAASKKRHLGQPSAGQLQRARGYHPVSLNFGRPDIAAFITGTVRGTAVVAQWA-------PPVESRPXXXXXXXXXXXPTAGGLRQMLTRLNTGQRISKRDLMEADLTVVNCSLAK 869
[Close]
BLAST of mRNA_M-pyrifera_M_contig7058.16846.1 vs. uniprot
Match: D7G8C8_ECTSI (Putative respiratory burst oxidase protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C8_ECTSI)

HSP 1 Score: 614 bits (1584), Expect = 2.850e-208
Identity = 336/623 (53.93%), Postives = 423/623 (67.90%), Query Frame = 1 
Query:   13 VTVVVALSNVAALWIQRYDASSGKLCSFGDKNACVTSVVSKVLLTIARLSAGALFPSIACCVLSKCYATRYFLHHSWLTLIVDLEPTHPLHTYFGVVTLVCSLIHTVAHVARAFYESHLNNLYGDEINLSGLAAMLLLLPVALPMMIEYIKTKMTYELRKFMHMLFIPFIVAICFHGSVLRTLGTLLLVWYVVDRLYFTTKMTFFIERPIFKSVGRGTLVRFELPTGYQFKPGAYVQVNCPAISASEWHPFSIFPVPGPTTRAGFHVEAVGNWTEQLFRLALEDPRMPLWITAAQPSVLEQTLYYDNVVLVCSGAGITPAVSVAERFAKKKNVHLLWLSREAGMVAMFEKQLHRVKSTVYLTGKPTAKTKKRIIDLLAPSRAEVVAKNAYCPSSKTASRASSASDLTVLEDGALAD-----------TASFLDYRGTFRDDEEG--KTERAT----DDGQDESIFGESLLGGSSFRGSSYGGRD--------------GDRDTKVIERESEDTNTASGHGRHRRRPSMGQNGRSRGLHPVSLNFGRPKIEDFIAETIQGTAVVAEWA---GQQGPLLPANEPRAPPT--NLRQVMSRLNTNQRISKMDLMSADLSIVEAKPSK 1773
            +T+ +AL NV ALW   YD  +G+LCS   + ACV+S     L+++ARL+AGALFPSI  CVLSKCYATRY LHHSWLT I+D EP+H LHTYFGV+ L+CS++H+V H+A    +   ++ + DEIN SGL A+LLLLP+ALPM +   KTK+T+E RK++H+LFIPF++A+CFHG  L+ LG +LL WY++DRLYFTTKMTF +  P++K VGRGTLVRFELP GYQ+KPGAYVQVNCPAIS SEWHPFS+FPVPG   RAGFHVEAVG+WT ++FR  LE+P+MPLWITAAQPSV+E+T+Y+DN         I+ A+ +   F KKKN+HLLW  R+AGMVAMFEKQL RVKSTVYLTGKPT KTKKR++DLLAPSR++VVA NA   +S+++S     +    LEDG                A   DY G  +DD EG  +TER +    DDG D S+ G S  GG S  G                     G  +                  RHR +PS GQ  R+RG HPVSLNFGRP I  FI  T++GTAVVA+WA     + P   ++ PR  PT   LRQ+++RLNT QRISK DLM ADL++V++  +K
Sbjct:  240 ITLAIALLNVVALWGWHYDTRAGRLCSIRSRRACVSSGPEMALISVARLTAGALFPSIFFCVLSKCYATRYLLHHSWLTFIIDFEPSHKLHTYFGVLILLCSVVHSVCHIAVGALQRRADHAFKDEINRSGLVAVLLLLPIALPMTMRLAKTKLTFEARKYLHLLFIPFMIAVCFHGRALQILGAILLAWYLLDRLYFTTKMTFLLSSPVYKPVGRGTLVRFELPPGYQYKPGAYVQVNCPAISVSEWHPFSLFPVPGSRPRAGFHVEAVGDWTNEMFRFCLENPQMPLWITAAQPSVVEKTMYFDNE------PSISEAIELEPVFQKKKNIHLLWCCRDAGMVAMFEKQLRRVKSTVYLTGKPTNKTKKRMVDLLAPSRSDVVAANAGTSTSRSSSLRGDPA--CALEDGRGXXXXXXXPEVSNLNADLDDYLGVLKDDFEGSGRTERGSLDRDDDGGDGSVMGYSAWGGDSILGXXXXXXXXXXXXXXXXXXXGMGRTEAAXXXXXXXXXXXXXXXXRHRGQPSAGQLQRARGYHPVSLNFGRPDIAAFITGTVRGTAVVAQWAPPVDSRPPAPSSSSPRQQPTAGGLRQMLTRLNTGQRISKRDLMEADLTVVDSSLAK 854
[Close]
BLAST of mRNA_M-pyrifera_M_contig7058.16846.1 vs. uniprot
Match: D7G8C4_ECTSI (Putative respiratory burst oxidase homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C4_ECTSI)

HSP 1 Score: 499 bits (1286), Expect = 4.660e-167
Identity = 296/621 (47.67%), Postives = 379/621 (61.03%), Query Frame = 1 
Query:   49 LWIQRYDASSGKLCSFGDKNACVTSVVSKVLLTIARLSAGALFPSIACCVLSKCYATRYFLHHSWLTLIVDLEPTHPLHTYFGVVTLVCSLIHTVAHVARAFYESHLNNLYGDEINLSGLAAMLLLLPVALPMMIEYIKTKMTYELRKFMHMLFIPFIVAICFHGSVLRTLGTLLLVWYVVDRLYFTTKMTFFIERPIFKSVGRGTLVRFELPTGYQFKPGAYVQVNCPAISASEWHPFSIFPVPGPTTRAGFHVEAVGNWTEQLFRLALEDPRMPLWITAAQPSVLEQTLYYDNVVLVCSGAGITPAVSVAERFAKKKNVHLLWLSREAGMVAMFEKQLHRVKSTVYLTGKPTAKTKKRIIDLLAPSRAEVVAKNAYCPSSKTASRASSASDLTVLEDGALADTASFLDYRGTFRDDEEGKTERATDDGQDESIFGESLLGGSSFRGSSYGGRDGDRDTKVIERESEDTNTASGHGRHRRRPSMGQNGRSRGLHPVSLNFGRPKIEDFIAETIQGTAVVA--EWAGQQGP----------------LLPANEPRA--PPTNLR------------------QVMSRLNTNQRISKMDLMSADLSIVEAKPSKVRLIRQMR 1797
            LW   YD +SG+LC+F D++ACVTS +SKVLLT++R+SAGAL PS+ACC+LSKCYATRYFLHHSWL L+V  EP H LHTYFG +TL+  ++H +AH+AR   E H N  +   +  SG  A++LL P+A+PM++   K  MT+E RK +HMLFIPF+VA+CFHG VL  L  +L+ WY+VDR YFTT++                        GYQFK G+Y+QVNCPAISA EWHPFS+FPVPGP  R GF+VEAVG+WT++LFRL+L+DP MPLWITAAQPSVLE+++Y++NV++VC+GAGITPA+ +A+  +KKKNVHL+WLSREAGMVA FEKQL RV STV+LTGKPT KTK+R+ DLLA S+A         P ++T S   S SD T LE G  A                     R+ +D  D+  +G    G     G     R                       +  RR   G+        P+SLNFGRP IE F+ ETI+G++     +WA   GP                   A++ RA  PP+  R                  +V++RLNTNQRISK DLMSADLS+V  K S  R+ R  R
Sbjct:   32 LWTLHYDPASGRLCTFHDRHACVTSALSKVLLTVSRMSAGALLPSMACCILSKCYATRYFLHHSWLALVVSFEPAHELHTYFGSLTLLFGVLHGLAHLAREVNEGHWN-CFASSMGRSGFIALVLLFPIAVPMLLGRPKKLMTFEFRKALHMLFIPFMVAMCFHGKVLAVLAGILVAWYLVDRTYFTTRI------------------------GYQFKVGSYIQVNCPAISAKEWHPFSMFPVPGPRPRGGFYVEAVGDWTQELFRLSLDDPCMPLWITAAQPSVLEKSVYFENVIMVCTGAGITPAICLADMLSKKKNVHLMWLSREAGMVATFEKQLRRVNSTVHLTGKPTEKTKQRLTDLLAHSKAP--------PPAETGS---SCSDPTDLEAGFAA--------------------ARSRNDDFDDGAYGAG--GDMEDLGGCSSNRXXXXXXXXXXXXXXXXXXXXXXXKRLRRTPFGK--------PISLNFGRPDIEKFLTETIRGSSSSQHEKWAATGGPPGKIVGAAAVGDSWQPQQNASKLRASPPPSTGRHAEKERDYSDTSSRDVRKKVLARLNTNQRISKRDLMSADLSVVPGKASPPRVPRSGR 586
[Close]
BLAST of mRNA_M-pyrifera_M_contig7058.16846.1 vs. uniprot
Match: D8LF83_ECTSI (Putative respiratory burst oxidase homolog protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF83_ECTSI)

HSP 1 Score: 409 bits (1051), Expect = 1.130e-130
Identity = 197/380 (51.84%), Postives = 266/380 (70.00%), Query Frame = 1 
Query:   13 VTVVVALSNVAALWIQRYDASSGKLCSFGDKNACVTSVVSKVLLTIARLSAGALFPSIACCVLSKCYATRYFLHHSWLTLIVDLEPTHPLHTYFGVVTLVCSLIHTVAHVARAFYESHLNNLYGDEINLSGLAAMLLLLPVALPMMIEYIKTKMTYELRKFMHMLFIPFIVAICFHGSVLRTLGTLLLVWYVVDRLYFTTKMTFFIERPIFKSVGRGTLVRFELPTGYQFKPGAYVQVNCPAISASEWHPFSIFPVPGPTTRAGFHVEAVGNWTEQLFRLALEDPRMPLWITAAQPSVLEQTLYYDNVVLVCSGAGITPAVSVAERFAKKKNVHLLWLSREAGMVAMFEKQLHRVKSTVYLTGKPTAKTKKRIIDLLAPS 1152
            VT+  AL      W   YD  +G +C       C T++  KV+LT +R  AG L+ S++  V+SKCYA+R +LHHSWL  ++D EP H LHTYFG +TLV    H V H+AR  Y      +Y      SG+ A+LLLLP+ LPM   + + KMT++ RK MHMLF+  +VA+CFH  V R + ++LL+WY++D  YF TK TF +  P ++++GRGT+V  +LP GY FK G+Y+ VNCPAI  +EWHPFS+ PVPG T+RA F+ EAVG+WT+ LFRL L +P  PLWITAAQPS++E TL+YDNV+L+C+GAGITPAV+VA+RFA KKN+HL+W++R+ GM+A+FEKQL  V STV+LTG P  + K  +  LL+ S
Sbjct:  125 VTLASALYKAIITWAVSYDRDTGHICP--SDVICATTLPEKVMLTGSRFLAGLLYASLSVSVVSKCYASRAYLHHSWLGTVLDFEPAHDLHTYFGFLTLVAGWAHGVLHLARVSYADEKFLMYETHAFRSGIFAILLLLPIVLPMRFSFFRNKMTFQFRKRMHMLFLVMLVALCFHSVVFRYVASILLLWYLIDNFYFITKQTFLVSHPTYEAIGRGTMVGIDLPEGYTFKAGSYIYVNCPAIDRAEWHPFSLIPVPGVTSRAAFYAEAVGDWTKDLFRLGLANPSQPLWITAAQPSLIETTLFYDNVLLICTGAGITPAVAVADRFAAKKNIHLMWIARDHGMMALFEKQLRMVTSTVHLTGNPDEEIKDAMSKLLSRS 502
[Close]
BLAST of mRNA_M-pyrifera_M_contig7058.16846.1 vs. uniprot
Match: A0A6H5JEC1_9PHAE (FAD_binding_8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEC1_9PHAE)

HSP 1 Score: 396 bits (1017), Expect = 5.530e-128
Identity = 184/295 (62.37%), Postives = 237/295 (80.34%), Query Frame = 1 
Query:   49 LWIQRYDASSGKLCSFGDKNACVTSVVSKVLLTIARLSAGALFPSIACCVLSKCYATRYFLHHSWLTLIVDLEPTHPLHTYFGVVTLVCSLIHTVAHVARAFYESHLNNLYGDEINLSGLAAMLLLLPVALPMMIEYIKTKMTYELRKFMHMLFIPFIVAICFHGSVLRTLGTLLLVWYVVDRLYFTTKMTFFIERPIFKSVGRGTLVRFELPTGYQFKPGAYVQVNCPAISASEWHPFSIFPVPGPTTRAGFHVEAVGNWTEQLFRLALEDPRMPLWITAAQPSVLEQTLYYDN 933
            LW   YD +SG+LC+F D++ACVTS +SKVLLT++R+SAGAL PS+ACC+LSKCYATRYFLHHSWL ++V  EP H LHT+FG +TL+  ++H +AH+AR   E + N  +   +  SG  A++LL P+A+PM++   K  MT+E RK +HMLFIPF+VA+CFHG VL  L  +L+ WY+VDR YFTT+M F IER +F+ VGR TLVRF+LP GYQF  G+Y+QVNCPAISA EWHPFS+FPVPGP  R GF+VEAVG+WT++LFRL+LEDP MPLWITAAQPSVLE+++Y++N
Sbjct:  241 LWTLHYDPASGRLCTFHDRHACVTSALSKVLLTVSRMSAGALLPSMACCILSKCYATRYFLHHSWLAVVVSFEPAHELHTFFGSLTLLFGVLHGLAHLAREVNEGNWN-FFASPMGRSGFVALVLLFPIAVPMLLGRPKKLMTFEFRKALHMLFIPFMVAMCFHGKVLAVLAGILVAWYLVDRTYFTTRMHFCIERAVFRPVGRATLVRFDLPPGYQFNVGSYIQVNCPAISAKEWHPFSMFPVPGPRPRGGFYVEAVGDWTQELFRLSLEDPCMPLWITAAQPSVLEKSVYFEN 534
[Close]
BLAST of mRNA_M-pyrifera_M_contig7058.16846.1 vs. uniprot
Match: D7G8D1_ECTSI (Putative respiratory burst oxidase homolog protein C-ter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D1_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 6.540e-56
Identity = 91/160 (56.88%), Postives = 125/160 (78.12%), Query Frame = 1 
Query:  139 LLTIARLSAGALFPSIACCVLSKCYATRYFLHHSWLTLIVDLEPTHPLHTYFGVVTLVCSLIHTVAHVARAFYESHLNNLYGDEINLSGLAAMLLLLPVALPMMIEYIKTKMTYELRKFMHMLFIPFIVAICFHGSVLRTLGTLLLVWYVVDRLYFTTKM 618
            L+++ARL+AGAL PSI  C++SKCYATRY LH+SWL  IVD EP+H  H YFG++ ++CS IH+  HV     +   +++  DE+NLSGL A LL+LPVALPM +  +K ++T+E RK++HMLFIPF+VA+CFHG+ L+ LG +LLVWY++DR YFTT+M
Sbjct:    3 LMSVARLTAGALIPSITVCIVSKCYATRYVLHYSWLAHIVDFEPSHTPHKYFGILAMLCSAIHSACHVVIGILQRRPHHVVKDEMNLSGLVAFLLVLPVALPMSVGCLKERVTFETRKYLHMLFIPFMVALCFHGTRLKALGAVLLVWYLLDRFYFTTRM 162
[Close]
BLAST of mRNA_M-pyrifera_M_contig7058.16846.1 vs. uniprot
Match: D7G8D0_ECTSI (Putative respiratory burst oxidase homolog protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D0_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 1.550e-39
Identity = 64/86 (74.42%), Postives = 77/86 (89.53%), Query Frame = 1 
Query:  688 TGYQFKPGAYVQVNCPAISASEWHPFSIFPVPGPTTRAGFHVEAVGNWTEQLFRLALEDPRMPLWITAAQPSVLEQTLYYDNVVLV 945
            +GY+++PGAYVQVNCPAIS SEWHPFS+FPVPGP  RAG HVEAVG+WT +LFRL+LE PRMPLWITAAQPSV EQ +Y+DN +++
Sbjct:    4 SGYKYQPGAYVQVNCPAISVSEWHPFSLFPVPGPNPRAGLHVEAVGDWTNELFRLSLEHPRMPLWITAAQPSVAEQAVYFDNGMMM 89
[Close]
BLAST of mRNA_M-pyrifera_M_contig7058.16846.1 vs. uniprot
Match: R1FV62_EMIHU (FAD-binding FR-type domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FV62_EMIHU)

HSP 1 Score: 161 bits (408), Expect = 1.200e-38
Identity = 100/321 (31.15%), Postives = 161/321 (50.16%), Query Frame = 1 
Query:  103 KNACVTSVVSKVLLTIARLSAGALFPSIACCVLSKCYATRYFLHHSWLTLIVDLEPTHPLHTYFGVVTLVCSLIHTVAHVARAFYESHLNNLYGDEINLSGLAAMLLLLPVALPMMIEYIKTKMTYELRKFMHMLFIPFIVAICFHGSVLRTLGTLLLV---WYVVDRLYFTTKMTFFIERPIFKSVGRGTLVRFELPTGYQFKPGAYVQVNCPAISASEWHPFSIFPVPGPTTRAGFHVEAVGNWTEQLFRLALEDPRMPLWITAAQPSVLEQTLYYDNVVLVCSGAGITPAVSVAERFAKKKNVHLLWLSREAGMVAMF 1056
            +  C     +  LL ++R SA   +P +    LSK    R  L  ++L++ +     H +HT  G +  +   +H+V H+ R   + +   L   +  +SGL   +L+  + +P+ + YIK +M +E RK +H L I + + ICFH   L  +  L+ V    Y+ D L  +   T+ ++  IF  +  G  + FE P G+ F+   YV V  P IS  +WH FS+F        A   + AVG+WT+ L     E  R P WI+    S       YDN++LV SG GITPA+S+   + +K+ V+L+W  R+A +V  +
Sbjct:   65 ETVCAEEWYTIALLAVSRSSAYLNYPMMMLLFLSKTNHLRTLLQQTYLSIYIPFYDLHAIHTLAGHIVALDYSLHSVCHIVRWALQGNAKLLLTHQTGVSGLLCFVLIPVITVPLSVAYIKKRMAWEWRKGLHYLSIVWGITICFHAP-LMDIAWLMGVPVGMYLADMLIGSVWRTYRVDTSIFYRLENGVELTFEHPPGFHFQGAGYVLVCLPWISQYQWHAFSLFAHSTKPNHACVCMSAVGDWTKSLHAHVQEPTRRPAWISGPFASPYSTAGEYDNLILVASGIGITPALSLITTYKEKRRVNLIWSCRDASLVEFY 384
[Close]
BLAST of mRNA_M-pyrifera_M_contig7058.16846.1 vs. uniprot
Match: A0A7S4FLU6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FLU6_9EUGL)

HSP 1 Score: 159 bits (402), Expect = 1.420e-37
Identity = 107/338 (31.66%), Postives = 172/338 (50.89%), Query Frame = 1 
Query:  112 CVTSVVSKVLLTIARLSAGALFPSIACCVLSKCYATRYFLHHSWLTLIVDLEPTHPLHTYFGVVTLVCSLI-HTVAHVARAFYESHLNNLYGDEINLSGLAAMLLLLPVALPMMIEYIKTKMTYELRKFMHMLFIPFIVAICFHGSVLRTLGTL--LLVWYVVDRLYFTTKMTFFIERPIFKSVGRGTLVRFELPTGYQFKPGAYVQVNCPAISASEWHPFSIFPVPGPTTRAGFHVEAVGNWTEQLFRLALEDPRM-PLWITAAQPSVLEQTLYYDNVVLVCSGAGITPAVSVAERFAKKKNVHLLWLSREAGMVAMFEKQLHRVKST---VYLTGK 1104
            C     + +LLTI+R+SA  ++P++     SK    R FL  ++L+  +     H LHT  G   L  S+  H++ H+ R   + +L+ L       +GL AM+    + LPM++  +K ++++E+RK +H L   F +A+ FH   +     +  +L+ Y +D LY      + IE   F  +  G  +RF  P G  F+ G YV +  P ++  +WH FS+F  P    ++  H+  VG+WT+ L     E P   P W+     S     L +DN++LV SG GITPA+ V    AK + V+L+W  R+ G+V  + +QL    S    +Y TGK
Sbjct:   91 CAEEWYTVMLLTISRVSAYHMYPALVLVWASKSNNLRTFLQGTFLSNYIPFYDLHNLHTTLGHFILWSSVFFHSLPHIIRWGLQGNLSFLVTRVTGATGLLAMVAAPCIVLPMLVPALKRRLSWEVRKGLHHLHWVFGIALAFHAPAVNIFWIMFAVLLVYGLDALYGLLLKAYIIETAEFTCLKNGVQLRFVNPEG--FRGGGYVLLCVPWLNRHQWHAFSLFSHPTEPNQSCVHISNVGDWTDLLHGSLTERPTCRPCWVQGPFASPYHTALEFDNIILVASGIGITPAIEVINHHAKTRKVNLVWSCRDPGLVQFYLEQLAFTNSAWNLIYYTGK 426
[Close]
BLAST of mRNA_M-pyrifera_M_contig7058.16846.1 vs. uniprot
Match: A0A7S4MEY4_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MEY4_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.260e-36
Identity = 102/355 (28.73%), Postives = 181/355 (50.99%), Query Frame = 1 
Query:   67 DASSGK------LCSFGDKNACVTSVV-SKVLLTIARLSAGALFPSIACCVLSKCYATRYFLHHSWLTLIVDLEPTHPLHTYFGVVTLVCSLIHTVAHVARAFYESHLNNLYGDEINLSGLAAMLLLLPVALPMMIEYIKTKMTYELRKFMHMLFIPFIVAICFH---------GSVLRTLGTLLLVWYVVDRLYFTTKMTFFIERPIFKSVGRGTLVRFELPTGYQFKP----GAYVQVNCPAISASEWHPFSIFPVPGPTTRAGFHVEAVGNWTEQLFRLALEDPRMPLWITAAQPSVLEQTLYYDNVVLVCSGAGITPAVSVAERFAKKKNVHLLWLSREAGMVAMFEKQLH 1071
            D SSGK      +   GD  A V      K  L ++R+SA +++P +    L+KC A       + L++ + L  +H LH Y G   +V S++HT  H+ R   + +++ L+     LSGL  ++ +  + +PM+  ++K +++YELRK +H LF  F V +CFH         G +   +G  ++V Y +D  Y   +MT  IE P F+ +  G  V+  +P   +F+     G +  +  P ++  +WH FS+F  P    +    +   G+WT  + +    D   P+W+     +  ++T  +DN +LV SG GITPA+S+ +   + + ++L+W  R+A M+  F + ++
Sbjct:   83 DVSSGKNTENGVIFVNGDYRAVVAQGGRQKFCLAMSRMSAFSMYPVLVLVFLTKCKALHSVFSKTPLSMFLILNDSHELHIYAGNFIIVDSIVHTYFHIMRWVEQKNVHLLWETRTGLSGLLVIVFIPLIVVPMV--FLK-RVSYELRKLLHSLFFGFAVGLCFHVPTSAFPNGGFIAWVMGGCIIV-YTIDAAYVYLRMTEKIETPSFQVLSSG--VQISMPVSARFQQRQEKGGFAYICLPWVNRMQWHAFSLFEDPTEPNKKQMFMMKTGDWTTTVHKALQRDTVRPVWLQGPFTTPFKKTESFDNQILVASGIGITPALSIIQAHRESRRLNLIWAVRDAAMLEFFLEHMY 431
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7058.16846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHI2_9PHAE4.280e-21452.94FAD-binding FR-type domain-containing protein n=1 ... [more]
D7G8C8_ECTSI2.850e-20853.93Putative respiratory burst oxidase protein n=1 Tax... [more]
D7G8C4_ECTSI4.660e-16747.67Putative respiratory burst oxidase homolog n=1 Tax... [more]
D8LF83_ECTSI1.130e-13051.84Putative respiratory burst oxidase homolog protein... [more]
A0A6H5JEC1_9PHAE5.530e-12862.37FAD_binding_8 domain-containing protein n=1 Tax=Ec... [more]
D7G8D1_ECTSI6.540e-5656.88Putative respiratory burst oxidase homolog protein... [more]
D7G8D0_ECTSI1.550e-3974.42Putative respiratory burst oxidase homolog protein... [more]
R1FV62_EMIHU1.200e-3831.15FAD-binding FR-type domain-containing protein n=1 ... [more]
A0A7S4FLU6_9EUGL1.420e-3731.66Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A7S4MEY4_9STRA2.260e-3628.73Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7058contigM-pyrifera_M_contig7058:336..8844 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score621.7
Seed ortholog evalue3.6e-175
Seed eggNOG ortholog2880.D7G8C8
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor
EggNOG OGsKOG0039@1,KOG0039@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons13
Model size1797
Cds size1797
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816598.629848-CDS-M-pyrifera_M_contig7058:335..4491622816598.629848-CDS-M-pyrifera_M_contig7058:335..449Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 336..449 -
1692278069.279631-CDS-M-pyrifera_M_contig7058:335..4491692278069.279631-CDS-M-pyrifera_M_contig7058:335..449Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 336..449 -
1622816598.6400988-CDS-M-pyrifera_M_contig7058:994..12061622816598.6400988-CDS-M-pyrifera_M_contig7058:994..1206Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 995..1206 -
1692278069.289888-CDS-M-pyrifera_M_contig7058:994..12061692278069.289888-CDS-M-pyrifera_M_contig7058:994..1206Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 995..1206 -
1622816598.6499038-CDS-M-pyrifera_M_contig7058:1685..17021622816598.6499038-CDS-M-pyrifera_M_contig7058:1685..1702Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 1686..1702 -
1692278069.2983992-CDS-M-pyrifera_M_contig7058:1685..17021692278069.2983992-CDS-M-pyrifera_M_contig7058:1685..1702Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 1686..1702 -
1622816598.6650598-CDS-M-pyrifera_M_contig7058:1915..23041622816598.6650598-CDS-M-pyrifera_M_contig7058:1915..2304Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 1916..2304 -
1692278069.3069386-CDS-M-pyrifera_M_contig7058:1915..23041692278069.3069386-CDS-M-pyrifera_M_contig7058:1915..2304Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 1916..2304 -
1622816598.6782365-CDS-M-pyrifera_M_contig7058:2869..29451622816598.6782365-CDS-M-pyrifera_M_contig7058:2869..2945Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 2870..2945 -
1692278069.315618-CDS-M-pyrifera_M_contig7058:2869..29451692278069.315618-CDS-M-pyrifera_M_contig7058:2869..2945Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 2870..2945 -
1622816598.6911235-CDS-M-pyrifera_M_contig7058:3497..35521622816598.6911235-CDS-M-pyrifera_M_contig7058:3497..3552Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 3498..3552 -
1692278069.3339274-CDS-M-pyrifera_M_contig7058:3497..35521692278069.3339274-CDS-M-pyrifera_M_contig7058:3497..3552Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 3498..3552 -
1622816598.7024362-CDS-M-pyrifera_M_contig7058:4403..45181622816598.7024362-CDS-M-pyrifera_M_contig7058:4403..4518Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 4404..4518 -
1692278069.3465312-CDS-M-pyrifera_M_contig7058:4403..45181692278069.3465312-CDS-M-pyrifera_M_contig7058:4403..4518Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 4404..4518 -
1622816598.7168233-CDS-M-pyrifera_M_contig7058:4834..49641622816598.7168233-CDS-M-pyrifera_M_contig7058:4834..4964Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 4835..4964 -
1692278069.3567011-CDS-M-pyrifera_M_contig7058:4834..49641692278069.3567011-CDS-M-pyrifera_M_contig7058:4834..4964Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 4835..4964 -
1622816598.7295437-CDS-M-pyrifera_M_contig7058:5759..58311622816598.7295437-CDS-M-pyrifera_M_contig7058:5759..5831Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 5760..5831 -
1692278069.372654-CDS-M-pyrifera_M_contig7058:5759..58311692278069.372654-CDS-M-pyrifera_M_contig7058:5759..5831Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 5760..5831 -
1622816598.7406743-CDS-M-pyrifera_M_contig7058:6260..64061622816598.7406743-CDS-M-pyrifera_M_contig7058:6260..6406Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 6261..6406 -
1692278069.390167-CDS-M-pyrifera_M_contig7058:6260..64061692278069.390167-CDS-M-pyrifera_M_contig7058:6260..6406Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 6261..6406 -
1622816598.752889-CDS-M-pyrifera_M_contig7058:7396..75781622816598.752889-CDS-M-pyrifera_M_contig7058:7396..7578Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 7397..7578 -
1692278069.4006932-CDS-M-pyrifera_M_contig7058:7396..75781692278069.4006932-CDS-M-pyrifera_M_contig7058:7396..7578Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 7397..7578 -
1622816598.7682364-CDS-M-pyrifera_M_contig7058:8066..82571622816598.7682364-CDS-M-pyrifera_M_contig7058:8066..8257Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 8067..8257 -
1692278069.410999-CDS-M-pyrifera_M_contig7058:8066..82571692278069.410999-CDS-M-pyrifera_M_contig7058:8066..8257Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 8067..8257 -
1622816598.779955-CDS-M-pyrifera_M_contig7058:8746..88441622816598.779955-CDS-M-pyrifera_M_contig7058:8746..8844Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 8747..8844 -
1692278069.4229252-CDS-M-pyrifera_M_contig7058:8746..88441692278069.4229252-CDS-M-pyrifera_M_contig7058:8746..8844Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7058 8747..8844 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7058.16846.1prot_M-pyrifera_M_contig7058.16846.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7058 336..8844 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7058.16846.1

>prot_M-pyrifera_M_contig7058.16846.1 ID=prot_M-pyrifera_M_contig7058.16846.1|Name=mRNA_M-pyrifera_M_contig7058.16846.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=599bp
TTLQVTVVVALSNVAALWIQRYDASSGKLCSFGDKNACVTSVVSKVLLTI
ARLSAGALFPSIACCVLSKCYATRYFLHHSWLTLIVDLEPTHPLHTYFGV
VTLVCSLIHTVAHVARAFYESHLNNLYGDEINLSGLAAMLLLLPVALPMM
IEYIKTKMTYELRKFMHMLFIPFIVAICFHGSVLRTLGTLLLVWYVVDRL
YFTTKMTFFIERPIFKSVGRGTLVRFELPTGYQFKPGAYVQVNCPAISAS
EWHPFSIFPVPGPTTRAGFHVEAVGNWTEQLFRLALEDPRMPLWITAAQP
SVLEQTLYYDNVVLVCSGAGITPAVSVAERFAKKKNVHLLWLSREAGMVA
MFEKQLHRVKSTVYLTGKPTAKTKKRIIDLLAPSRAEVVAKNAYCPSSKT
ASRASSASDLTVLEDGALADTASFLDYRGTFRDDEEGKTERATDDGQDES
IFGESLLGGSSFRGSSYGGRDGDRDTKVIERESEDTNTASGHGRHRRRPS
MGQNGRSRGLHPVSLNFGRPKIEDFIAETIQGTAVVAEWAGQQGPLLPAN
EPRAPPTNLRQVMSRLNTNQRISKMDLMSADLSIVEAKPSKVRLIRQMR
back to top

mRNA from alignment at M-pyrifera_M_contig7058:336..8844-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7058.16846.1 ID=mRNA_M-pyrifera_M_contig7058.16846.1|Name=mRNA_M-pyrifera_M_contig7058.16846.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8509bp|location=Sequence derived from alignment at M-pyrifera_M_contig7058:336..8844- (Macrocystis pyrifera P11B4 male)
ACAACGCTTCAGGTTACCGTGGTGGTGGCGCTGAGCAACGTGGCGGCCCT
GTGGATTCAACGCTATGATGCATCTTCGGGAAAGCTCTGTTCGTTCGGGT
GGGTGTCTTAATGTCTGGAAGAATAGTCGTTTAGTTTCCATGGTACTTGT
TCTTCGTGTTCCTGCCCACATTCTGTACAGCAGCGGGGCTCTAGTCCCAC
CTTTAACCTGCTCATTTCAGTATCGGTCCTGTCACCATGAACCCGACACG
CTGGCCTCGGCTTTATTTCTTGTGTGAGGAAAGATGTGCTCCACAATAAC
GTCAGTAGAACAGGTCTCCAACTCTTATGTTTCCCCGGAATTGCTGGGCT
AAGTTTCTTGTGAAGTTCACTGTTATGAGGAGGGCGGTACGGTGTGTATG
CTCACACTGTGTGCGCATAAAAAAAGAGATTGCAGCAAGGGCTCACTCTA
ACGTGCAGGTGATGTGTATTTTACGAAGACAGTTCGAGCACAACCAAGCG
CAACTGCAGCAAGTACCTGCGTTTAACCCCGATCGATCGTCGCCACTGTT
CGCACTGTCGCGCTTCGTTCCCTTAATTCCACTGTAGTGACAAGAATGCG
TGCGTGACGTCAGTAGTTTCGAAGGTGCTGCTGACAATCGCGAGACTTTC
CGCAGGAGCTTTGTTCCCGAGCATAGCTTGCTGTGTCCTCTCCAAGTGCT
ACGCCACGAGGTACTTCTTGCACCATTCATGGCTCACCCTCATCGTCGAC
CTCGAACCCACACACCCGCTGCACACCTGTGAGTCTACCCTCCGGTCATG
CTGTTCTTGCTTGATTCCCTGGCGGTGGTGGTGTTGACGGTGTTGGTACT
CGTGCAGGTGGTGATGTTGGTGATCATGGTGGTGGTGGTGATGGTCGTCG
TGATCGTGGTTTTGGTCGTGGTTGTGGCGGACGTTGTGGGGGCTTGGGGT
GTGGGAGGTGAGGACCGTGTATGTGGGTGGGATGGTGAGGTGGAACTGTT
GATGGTATGCACCCAGGGCATCACAAGTTTGTAAAGCATGTAGCCGTGGA
CTACCAATACACGATGTGAGGCAGATTACGTCCGTCTACTCGTTCGAATA
TTGAAGTTTTTCATTTTGTGTACAACACCCTCCCTCCCTCCCTCCCTCCC
GTTTACGATACTTCGTCAAAACAAATTTAACCATTTAGTCAGTTGAACTG
TATCCAACCTTCTGAACATAAAATGTCTCAAACATTCCGTTTGGTTCGTA
TCGTATCCCCCGACAGATTTCGGTGTGGTTACTCTGGTATGCAGCCTCAT
CCACACCGTCGCCCATGTCGCGCGAGCGTTTTATGAAAGTCACCTGAATA
ACTTGTATGGCGACGAGATCAACCTGTCTGGCCTGGCGGCTATGCTTCTG
CTGCTTCCGGTGGCGTTGCCCATGATGATCGAGTATATAAAAACGAAGGT
GGGGTGGGGTATGCCTCCCTCTGGCGGGAGGAGGGGCTGTCATGCATGGC
CGTAGTCGTGTGGCCATAGACCCTGGCAGCCCTACAACGCCGGGTCGGAG
CACGCCGGGTTTTCACCGACCAGGCAGACACTGTTTGCACCAAGCGTGAA
GCGCCGTGAGGTGTTGGACGAGTCGCATAAATAGTGAGAGCTGCATCCCA
CTAAGAAACGCTTTGGAGGCTGATTTTCTTCCGAATGGATGACAGCGTCA
ACTATAATGGAAAATACTCTGTTGTGGCCACTTCCAGAGACAAGAAAGAG
TTATTTTATAACTGCCTCGTGGGTGCCTTTCCATGTACACATTGCATGAT
ACGACCATTCCCTTTGTGCGGAGTTGAGGTTCTGCCCGTAAAAAAAAGTC
GGAATCGACCGACAGTCGTAGTGATGGCCAAACTACAAATGTAAAGGACG
GGAGCTGGGGGGGGCGAGCTTTTCTTGGCGGGACCTGTCTGCTCTTGCAT
GTGAAAATACTTTAGGAACAGGCGCGTCCCACGGCAGAGGTTGCTCGTTC
GGGGCCAAAACATTGTTGCCGAATGATGTGCTCCACTGAGCATACACCGG
TTCGTATAAAATGTAAATGCTCATTGTTTTGTTGTAGGACTACCGTACGT
ACGACAAAAAGAAATAACGATGGGGAAGCGCAAACAAACTTCTTTGAAGC
CATGTTTCGGGCGAGTAAAAACGGTCGACCACCCCTCCCGCAACAACGTT
CTCAACGGTTTCATCTGTCCATACCTGTGTTCTTCGAAGCACGCGTACCG
GCATAGGCGCCCCCGAGTCTAGATTAGTTTGGTGGCGTCCGCAAACGGCT
ACTCCTGCCTTGCCACAAGCGTAATAGATGTGCCATATTGTGCGGATGTC
TAACACCTTCCTGTCGACCTGCTGCGCGTCCGATTTGTCGCCTTCGTGCT
TTCATCCCCCAAATTATTGTGTGTACGTGCCCCTCCAGATGACGTACGAG
TTGAGGAAGTTCATGCACATGCTCTTCATCCCCTTCATAGTGGCCATTTG
CTTTCACGGGAGTGTGCTTAGAACGTTGGGCACCTTACTCTTGGTGTGGT
ACGTTGTAGACCGCCTGTACTTCACCACCAAAATGTGAGCACACGACACT
GCAACAGCTGTACCCTCTACCGCCTAATCAATAATTTTTTGATGTTTGCC
ATCACCGCCTGTATACTGATTTCGAGATGTATCTGTGGTGCGGCCGAGTG
ATAGACCGCTTCCGTGTGTAGCCCGTAGAAACCATGCGTGAATTGTTTGT
GCTGATGGCGTTTCCGTGATACTTACGTGTGCATTCCGTTTGTGTTTTGC
GTGGGCCGCTCTTATATACGCCTGCTGTGCGGTGACTCTCGACCAAATTA
TTTTCATTTGGGGGGTTTGCACTCGAACACCACCCGATAGCACGCCCGTC
TAGGTATATACGGGAGGTTGGACCTCGTTCCCGCACTGAATTTTACGTGG
TGGCCGTTATTCGGTCGGTGATCCCCCCCCGCACCTGTAACCATGTCGCC
GTGAACGATGCAGGACGTTCTTCATCGAGCGACCTATCTTCAAATCTGTT
GGAAGAGGCACGCTTGTCCGCTTCGAGCTGCCCACGTGAGGAAATGGCCC
CAATGAAGTCAGGATGTTTCTTATTGTGGTGCTGCGATTCTCGTAGAAAA
CCACGCTTCTGCGGAACACAAGCATTCGCCTCTCGCGATTTGCGCAGTCG
TCCAGAAACCCGAACCAGCAGTGATGCATATGACCGTGCAGGTTTTTGTT
CGACGGCTAGAACAATATATTCTCACGTTGTACGTAGCGACGCTTTTGTT
GCGGGCGATTGACGGGTTCACCGAAACCTTCAGTTTGTTGACTTTACGTT
CACGGCTGTCGTTACGCTTGTTTCATGATTTTCACACAAGGGCGGCCGAA
CGGTCCGCAGGTTAGGCGTCGGCACGGGACAAAACTCCTATATGTCAAAT
ATTACCTATATTAGGGTATCGGGGGAAACAGCCGGTGAATGACTGTCTTG
AGATACTGCAAACTGACCATTTGCTCGCCTCCGAGCGACACGATGTGCTG
CTTGCTGTGTGGTTAGTGCTCGTATAGACCGCGTTTAGTCGTAACTCGAT
ATGACGACGCAACGTGTATATACCGAACGACGCTTCGGCCATGATGAACC
TGCCAGTGCAGCTTGTCGGATCACGGCTTATGGCTGCAACATACTTGCGA
GAGCGCCGTCTACGAATGCCCTGACATCTCGCCAAGGTTCAACCCACGAC
GTTTCGAACCACGTGCATTTCTGGGCCGTCTACACGTTCTACGCAAACGT
AGTCGGCTGTGTCACGCGAGCAACCCATGCTATCCGACCGACCTCGTGTA
ACGTTATGCACACTATCACGTGCGGTGCAGTGGGTACCAGTTCAAGCCCG
GCGCATACGTCCAAGTCAACTGCCCGGCGATCAGCGCCTCGGAATGGCAC
CCCTTTTCAATATTCCCTGTCCCCGGGCCCACGACAAGGGCGGGTTTCCA
TGTGGAGGCGGTAAGGACACGTTTCCTATCTTAGAGGCTGACTGGTGCTG
ATAGGTTTCGTCGAACGATCAAATATTGTCGAGCTATGTAATGTATACCG
CATGCGTGCGTACACGTACAGACAAGTACGTAGCCCTACTGTGCCAAAGA
CTGATACATTTGCGTGTTTGGAAATACGAGTGAGCTCTAGGACCGAATAT
TGAGTCCAGCTTTCCCCGATCGTCGAAACCGTCCCCAGCTTGACGTCTAT
TCGCTGTCTCGTCGTGTTTGATTGACGACACCACAATCGATTTCTTTTCT
TGTTTTGTTCACCCGAAACGAGACAGGTGGGTAACTGGACGGAGCAACTA
TTTCGCCTCGCTTTGGAGGACCCTCGGATGCCTCTGTGGATCACGGCCGC
GCAGCCAAGTGTTCTCGAGCAGACCCTCTACTACGATAACGGTGCGTGGG
GGATCGCGTGCTACGATCGAGGTAGCCTTTTTCTTGCTTTCAAAAAACTT
CAGACGACCGGGTTTCTTGACCCTTTCAGGACCGCAGTCCCGATTTGGGG
ACCAACTGCTTACTGCATGAGTGATTTGTCCCCAAAAACCGGGATTGCAG
TACTGTCTGTCTGTCAAGGGTTGCGCTAATATACATAGTCGGAAAACCAA
CATACGGTAGTATACGATGGATTCGGGATTCCTCATCAGGGTTGCATTTG
TTTTTTCCTCAGAACTAGTTTTTCTGGTGAGAGGTATTAGAGCTCCTCCA
TTGAGTAGACTCAAAACAGTTTGGTTTCTGCCGCCCTTCTATCGGAGCAC
GCGTCGTTCGAACAGACATTCGGAGCCATCTCAGAATAGCGATCTATTGA
GATGATGGCTTCAGCGGTGTCTGTGATCAATCTAGTACGGCTATATCTGT
GGGGTAGTGTACTAGATGATAGTTTCGATCAAAGGCTCGCCGTTTTTGGT
GCACCCGGATTTCGCTTGTCGACCGATGTATGAACATATGGGTTTAGTGC
CTGAAGTTCGAGCGAGTGACGACCCGTTAATGCTGTTTTCGTCGACGTTT
AGGTGCTTCACCGCAAGAGCGTGTGGCGACCCCGTTAATGCTGTCTGTGG
ACGGTTAGGTGCTTCACATATTTGTTTGGAAATTTGATGACATGCTCCTC
ATGTTCGACGCATGCCTCCGCTGGTCGCCTACGTATTTCTCTCGTGCTTT
GGCGTCTTTTGTCCTATGTTGTTTGCCTGCCTCGGTTGGGTTGCTCCTGC
CGGCGACTCTCACGACACGGACGCATCTCACTGGGGTAACAGTTGTTCTC
GTGTGCAGTGGCGCGGGTATCACGCCCGCCGTTTCAGTTGCCGAGAGGTG
AGTTCATTTCGGGCACTCGTAGCAACAGCGATTCCTCTTGTGTTTTTCGA
TTACTGGCTGTAGTTATTTATTCGTACTGAGCACAATAATTTCATTGCAT
GTTTGTAAGCGCATTTGCCTGTCTGCGCCAAGTTTATCGTTTCTTCAATT
GTTGGCATGCGGGTGTTCTTGTTCCTTCACTTATGAACGCCGAACGAGCG
TTGCGTTGTGCTTGTACCCGCGTCTGTTTGTGTATATGCGCGAACTGAAC
GCTGTTTTGCTTACGTGCGCGAGGGAGGGGGGATCGTTCGTGTTTTCGGC
AATAAGGATACCCTCGGTCCATTAGGCGCCTTGCGCGTGTTAAACCTCGT
TTATATGTGCTGAAAGTGGTGATAATTTGTTAAACGTGGTCATGGTCCGT
TTTCCTGTTTACGGTTTGGGCTGTTTTATGCTCCCCCCCCACCCCATTCC
TTAAGCCCCTACGTGTGAGTAACCATGCTCCGTTTAAGCACATTCTACGT
TTTCGGGAACGCGCGCACTTCATACTTACGTGTATCTGCGGTTCTCAAGG
TTCGCCAAAAAGAAGAACGTCCACCTCCTCTGGCTGTCGCGTGAGGCCGG
CATGGTCGCCATGTTCGAGAAACAGGTATATAATATCCACGGATTGCACG
TTGTTCTTGTTCTTCGAAACGGCAGTTTCGCGCTCCAACTTATCCATCCG
TCGGACAGACCACAATCTAGTTCATCTGCGTCCTGATGACGTGTAGGACC
TGTATGGTACAGTTACAGCCCAGGAAACATGTGATACATGACAGCAGATC
ATGCAGCGTATCTAGTGAAGAGGTTCCACCCGGCAACATCAACCATAGAA
GATACAGCAGTACAGATCAGGAATGTATCTGCTCCTCAACCATATTCAGA
TTTCACTCAGGGGGGAAATCCGTGAATATATGTGCGACGCGTGAACGAGT
CCGGTTGCTCGCTTCCGCGCAAAGTATGCAAGGCATCCCAAACATCGCAC
CACCGACCCCAACACCCGGTGGATAACAAACACCATCCTCAATTATTTTT
CGCCGCGCGTTGCCGGGCGCTGGGCACAGTTGCACGGGGCGAAGGGCGCT
GTCTACGTTAGCACCGACGCCAACACGCGAAGGACGATTACCCCAAGCTT
CCTTTCGTTTTCACCGCGCGTCGCCGCCTGTTGACCGCAGTTGCACCGGG
TGAAGAGCACCGTCTACCTCACGGGAAAGCCTACCGCCAAGACGAAGAAA
AGAATCATCGATCTCCTGGCGCCGTCCAGGGCGGAGGTGGTGGCGAAAAA
CGCTTACTGCCCCTCCAGCAAGACAGCCTCGAGGGCATCCTCCGCCTCGG
ACCTGACCGTGCTCGAGGACGGTGCTCTGGCGGACACCGCCAGCTTTTTG
GACTACAGGGGGACCTTTAGGGACGACGAGGAGGGTAAGACGGAGCGAGC
GACGGATGACGGACAGGACGAGTCGATCTTTGGGGAGTCTCTGCTGGGAG
GGTCCTCGTTCCGAGGGAGCTCGTACGGAGGGAGGGACGGCGATCGCGAC
ACTAAGGTGATCGAACGGGAATCGGAAGAGTAACTCATATGGGTTCGTAT
GCCAACGCCGAAATGTGCACCAGGAATATAGATAAATGTAAATAGATACA
TAGATATATTCAGGTTTTGTGTTTACTACTGTGCAGAGCTGAAGATGCAC
ATCGCGCCAGGCACTTCCAGCGCAACTGTACGTACCCGGTACCTGGTATG
ATATAGTACACTATTAGTATATATTATGTGTATACGTTTCAGTACCAACA
CGGCTTCTGGTGTACGAAAAGGTACGTGAGTATACAGCAATCGACACAAA
TAATTACACTGGAAACGCATAAAATACCGATAATGTGTTGGACACTTTCG
CGGTATTCACCTGGTGAAAGGATAGATTTTCAGTGCCAGCACGCAGCTGT
TAAGTGGTGGAAACCCCTTGAAATGACTATCAGAGGAAACATCAGTACCT
ATGATGAGTTGAACTATCGAAAAAACCAGAGGCACGTGGAGAAAGAGTGC
GGTTTCTTTTGTTTCAAGATCGTGTGTATTCGATTCTCTCGATGGTTCGC
CATCGCGACCCACCGTCCGTTCGTTGGTGAACAGTAGTGCGGCCTATGCA
CCGTTTGCAATACAAGCTCGCAGATTTACATCAGCAGTTTTTTCACATGT
TTCAGAATGGCGATACCTCACTCCCTGCAGCAACCATGATTGGCTTATGT
GTCGCTTCGTGTACCTCTTATCGTTGTGCAGGTGACAGGTCACGGCAGAC
ACCGACGCCGCCCTTCGATGGGCCAGAACGGCCGTTCGCGCGGGCTGCAC
CCCGTCTCCCTCAACTTCGGCCGCCCGAAAATCGAAGATTTTATCGCGGA
GACAATCCAGGGGACGGCCGTTGTGGCCGAATGGGCCGGCCAGCAAGGAC
CGCTGCTGCCTGCAAACGAACCAAGGGCACCACCTACCAATCTGCGGCAG
GTAAACACGATTCCAACAGAACACGAGGGCAGGACAATGCGGGGGTGGGG
GTACGGACGAATAGACCGACAATGGTTGCGAGCTACAGTACGCGACACTT
CTTTCGGGTAAACTACGCTGCACCTCTGTTGGGGCTACTCGCGTAAAAAT
TCGACATCGTCATGCTTCGGAAGATGTGAATGGGGTCAATCGTTTGGTCG
TTCGGGTCACCTGCCACCATGGGATACTTTTGAAACCGGCGCGACACGTT
TCACTGCAAGGTGTCATATATTCGGGCAGAAAAAAATCGGACAATAGCTG
CTGCCTTCCAATTTCGGTATTTGCGTGATATAGCCCAAACAAGAAATGGT
TCGACGCATTCTTCCACCCTAAGTACGTCACGGCGGTCGCCTAGCAGAGA
AGAGAGATGATGATATCTGGTTGCACCTTCAAACAACCACACGGCCTTTT
TACCCGGCCGTCTATCGGCGACCATCCTGCACATCTAAGGTCTGCAAGCT
TCCTTTTGCCCCGCGCCGAACACTCTATGTGCATCGGCCCCCCAGGTGAT
GTCCCGGCTCAACACGAACCAGCGCATCTCCAAGATGGACCTGATGAGTG
CTGATCTGTCCATCGTGGAAGCCAAGCCGTCTAAGGTGCGCCTGATACGC
CAGATGCGT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig7058:336..8844-

>mRNA_M-pyrifera_M_contig7058.16846.1 ID=mRNA_M-pyrifera_M_contig7058.16846.1|Name=mRNA_M-pyrifera_M_contig7058.16846.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3594bp|location=Sequence derived from alignment at M-pyrifera_M_contig7058:336..8844- (Macrocystis pyrifera P11B4 male)
ACAACGCTTCAGGTTACCGTGGTGGTGGCGCTGAGCAACGTGGCGGCCCT
GTGGATTCAACGCTATGATGCATCTTCGGGAAAGCTCTGTTCGTTCGGAC
AACGCTTCAGGTTACCGTGGTGGTGGCGCTGAGCAACGTGGCGGCCCTGT
GGATTCAACGCTATGATGCATCTTCGGGAAAGCTCTGTTCGTTCGGTGAC
AAGAATGCGTGCGTGACGTCAGTAGTTTCGAAGGTGCTGCTGACAATCGC
GAGACTTTCCGCAGGAGCTTTGTTCCCGAGCATAGCTTGCTGTGTCCTCT
CCAAGTGCTACGCCACGAGGTACTTCTTGCACCATTCATGGCTCACCCTC
ATCGTCGACCTCGAACCCACACACCCGCTGCACACCTTGACAAGAATGCG
TGCGTGACGTCAGTAGTTTCGAAGGTGCTGCTGACAATCGCGAGACTTTC
CGCAGGAGCTTTGTTCCCGAGCATAGCTTGCTGTGTCCTCTCCAAGTGCT
ACGCCACGAGGTACTTCTTGCACCATTCATGGCTCACCCTCATCGTCGAC
CTCGAACCCACACACCCGCTGCACACCTATTTCGGTGTGGTTACTCTGGT
ATGCAGCCTCATCCACACCGTCGCCCATGTCGCGCGAGCGTTTTATGAAA
GTCACCTGAATAACTTGTATGGCGACGAGATCAACCTGTCTGGCCTGGCG
GCTATGCTTCTGCTGCTTCCGGTGGCGTTGCCCATGATGATCGAGTATAT
AAAAACGAAGATTTCGGTGTGGTTACTCTGGTATGCAGCCTCATCCACAC
CGTCGCCCATGTCGCGCGAGCGTTTTATGAAAGTCACCTGAATAACTTGT
ATGGCGACGAGATCAACCTGTCTGGCCTGGCGGCTATGCTTCTGCTGCTT
CCGGTGGCGTTGCCCATGATGATCGAGTATATAAAAACGAAGATGACGTA
CGAGTTGAGGAAGTTCATGCACATGCTCTTCATCCCCTTCATAGTGGCCA
TTTGCTTTCACGGGAGTGTGCTTAGAACGTTGGGCACCTTACTCTTGGTG
TGGTACGTTGTAGACCGCCTGTACTTCACCACCAAAATATGACGTACGAG
TTGAGGAAGTTCATGCACATGCTCTTCATCCCCTTCATAGTGGCCATTTG
CTTTCACGGGAGTGTGCTTAGAACGTTGGGCACCTTACTCTTGGTGTGGT
ACGTTGTAGACCGCCTGTACTTCACCACCAAAATGACGTTCTTCATCGAG
CGACCTATCTTCAAATCTGTTGGAAGAGGCACGCTTGTCCGCTTCGAGCT
GCCCACGACGTTCTTCATCGAGCGACCTATCTTCAAATCTGTTGGAAGAG
GCACGCTTGTCCGCTTCGAGCTGCCCACTGGGTACCAGTTCAAGCCCGGC
GCATACGTCCAAGTCAACTGCCCGGCGATCAGCGCCTCGGAATGGCACCC
CTTTTCAATATTCCCTGTCCCCGGGCCCACGACAAGGGCGGGTTTCCATG
TGGAGGCGTGGGTACCAGTTCAAGCCCGGCGCATACGTCCAAGTCAACTG
CCCGGCGATCAGCGCCTCGGAATGGCACCCCTTTTCAATATTCCCTGTCC
CCGGGCCCACGACAAGGGCGGGTTTCCATGTGGAGGCGGTGGGTAACTGG
ACGGAGCAACTATTTCGCCTCGCTTTGGAGGACCCTCGGATGCCTCTGTG
GATCACGGCCGCGCAGCCAAGTGTTCTCGAGCAGACCCTCTACTACGATA
ACGGTGGGTAACTGGACGGAGCAACTATTTCGCCTCGCTTTGGAGGACCC
TCGGATGCCTCTGTGGATCACGGCCGCGCAGCCAAGTGTTCTCGAGCAGA
CCCTCTACTACGATAACGTTGTTCTCGTGTGCAGTGGCGCGGGTATCACG
CCCGCCGTTTCAGTTGCCGAGAGTTGTTCTCGTGTGCAGTGGCGCGGGTA
TCACGCCCGCCGTTTCAGTTGCCGAGAGGTTCGCCAAAAAGAAGAACGTC
CACCTCCTCTGGCTGTCGCGTGAGGCCGGCATGGTCGCCATGTTCGAGAA
ACAGGTTCGCCAAAAAGAAGAACGTCCACCTCCTCTGGCTGTCGCGTGAG
GCCGGCATGGTCGCCATGTTCGAGAAACAGTTGCACCGGGTGAAGAGCAC
CGTCTACCTCACGGGAAAGCCTACCGCCAAGACGAAGAAAAGAATCATCG
ATCTCCTGGCGCCGTCCAGGGCGGAGGTGGTGGCGAAAAACGCTTACTGC
CCCTCCAGCAAGACAGCCTCGAGGGCATCCTCCGCCTCGGACCTGACCGT
GCTCGAGGACGGTGCTCTGGCGGACACCGCCAGCTTTTTGGACTACAGGG
GGACCTTTAGGGACGACGAGGAGGGTAAGACGGAGCGAGCGACGGATGAC
GGACAGGACGAGTCGATCTTTGGGGAGTCTCTGCTGGGAGGGTCCTCGTT
CCGAGGGAGCTCGTACGGAGGGAGGGACGGCGATCGCGACACTAAGGTGA
TCGAACGGGAATCGGAAGATTGCACCGGGTGAAGAGCACCGTCTACCTCA
CGGGAAAGCCTACCGCCAAGACGAAGAAAAGAATCATCGATCTCCTGGCG
CCGTCCAGGGCGGAGGTGGTGGCGAAAAACGCTTACTGCCCCTCCAGCAA
GACAGCCTCGAGGGCATCCTCCGCCTCGGACCTGACCGTGCTCGAGGACG
GTGCTCTGGCGGACACCGCCAGCTTTTTGGACTACAGGGGGACCTTTAGG
GACGACGAGGAGGGTAAGACGGAGCGAGCGACGGATGACGGACAGGACGA
GTCGATCTTTGGGGAGTCTCTGCTGGGAGGGTCCTCGTTCCGAGGGAGCT
CGTACGGAGGGAGGGACGGCGATCGCGACACTAAGGTGATCGAACGGGAA
TCGGAAGATACCAACACGGCTTCTGTACCAACACGGCTTCTGGTCACGGC
AGACACCGACGCCGCCCTTCGATGGGCCAGAACGGCCGTTCGCGCGGGCT
GCACCCCGTCTCCCTCAACTTCGGCCGCCCGAAAATCGAAGATTTTATCG
CGGAGACAATCCAGGGGACGGCCGTTGTGGCCGAATGGGCCGGCCAGCAA
GGACCGCTGCTGCCTGCAAACGAACCAAGGGCACCACCTACCAATCTGCG
GCAGGTCACGGCAGACACCGACGCCGCCCTTCGATGGGCCAGAACGGCCG
TTCGCGCGGGCTGCACCCCGTCTCCCTCAACTTCGGCCGCCCGAAAATCG
AAGATTTTATCGCGGAGACAATCCAGGGGACGGCCGTTGTGGCCGAATGG
GCCGGCCAGCAAGGACCGCTGCTGCCTGCAAACGAACCAAGGGCACCACC
TACCAATCTGCGGCAGGTGATGTCCCGGCTCAACACGAACCAGCGCATCT
CCAAGATGGACCTGATGAGTGCTGATCTGTCCATCGTGGAAGCCAAGCCG
TCTAAGGTGCGCCTGATACGCCAGATGCGTGTGATGTCCCGGCTCAACAC
GAACCAGCGCATCTCCAAGATGGACCTGATGAGTGCTGATCTGTCCATCG
TGGAAGCCAAGCCGTCTAAGGTGCGCCTGATACGCCAGATGCGT
back to top