mRNA_M-pyrifera_M_contig70413.16812.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig70413.16812.1
Unique NamemRNA_M-pyrifera_M_contig70413.16812.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: A0A2I0WRR1_9ASPA (Regulator of nonsense transcripts 1 like n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WRR1_9ASPA)

HSP 1 Score: 197 bits (502), Expect = 2.810e-53
Identity = 116/313 (37.06%), Postives = 169/313 (53.99%), Query Frame = 1
Query:    1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939
            DA+   PL P E+++WDE  VP  + + +           G L+LPKL LQFLT HD + R  +LFRLE+ Y IR DI +AV         E D        T FRGWSR A+P+ +F I  +  P IG+  PS V A +   +S+Y   IR EWDS++EHDVLFL+++RP     S++           +A  CT  +R+G+  VRG  V+ + DEEG+  N      K       +E+            PPKG  RTI +ALD AQY +D++++     +D +G  ++++RR  K+NNF+A+L +  D +
Sbjct:  380 DAINALPLYPNEKIMWDESLVPSINYSGE-----------GCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPHLLAYINKEGD--------TAFRGWSRMAVPVREFKITEVKQPNIGEVKPSSVTAEVSFSISSYRAHIRSEWDSIKEHDVLFLLSIRPSFEPLSQE-----------EAAKCTVLERLGLQYVRGCEVIEVRDEEGVLMNDFTGSIKR------DEWK-----------PPKGDLRTIVVALDTAQYHMDVTDASDRGAMDVYGSFNILMRRKPKENNFKAILESIRDLM 645          
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: A0A1D6K4P2_MAIZE (p-loop containing nucleoside triphosphate hydrolase superfamily protein n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6K4P2_MAIZE)

HSP 1 Score: 192 bits (487), Expect = 1.960e-51
Identity = 118/313 (37.70%), Postives = 168/313 (53.67%), Query Frame = 1
Query:    1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939
            DA+   PL P E+++WDE  VP  + + +           G L+LPKL LQFLT HD + R  +LFRLE+ Y IR DI +AV    P      +  G     T FRGWSR A+PI  F I  +  P IG+  PS V A++   +S+Y   I+ EWD+L+EHDVLFL+++RP     S +           +AE  T  +R+G+  VRG  V+ I DEEG   N      K       EE+            PPKG  RT+R+ALD AQY +D++E+      + +G  ++++RR  K+NNF+A+L +  D +
Sbjct:  471 DAVNALPLYPNEQIMWDESLVPSINYSGE-----------GCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAV----PHLHAYINNEGE----TAFRGWSRMAVPIKGFKITEVKQPNIGEVKPSAVTADVTFSISSYRYQIKSEWDALKEHDVLFLLSIRPSFEPLSPE-----------EAEKSTVPERLGLQYVRGCEVIEIRDEEGALMNDFTGRIKR------EEWK-----------PPKGEIRTVRVALDTAQYHIDVTETAEKGTENVYGTFNILMRRKPKENNFKAILESIRDLM 736          
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: A0A0E0GNH0_ORYNI (Uncharacterized protein n=13 Tax=Magnoliopsida TaxID=3398 RepID=A0A0E0GNH0_ORYNI)

HSP 1 Score: 192 bits (488), Expect = 2.250e-51
Identity = 117/313 (37.38%), Postives = 167/313 (53.35%), Query Frame = 1
Query:    1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939
            DA+   PL P E+++WDE  VP  + + +           G L+LPKL LQFLT HD + R  +LFRLE+ Y IR DI +AV         E D        T FRGWSR A+PI +F I  +  P IG+  PS V A++   +S+Y P I+ EWD+L+EHDVLFL+++RP     S +           +A   T  +R+G+  VRG  V+ I DEEG   N      K       EE+            PPKG  RT+++ALD AQY +D++E       + +G  ++++RR  K+NNF+A+L +  D +
Sbjct:  471 DAVNALPLYPNEQIMWDESLVPSINYSGE-----------GCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPHLHAYINNEGD--------TAFRGWSRMAVPIKEFRITEMKQPNIGEVKPSAVTADVTFSISSYKPQIKSEWDALKEHDVLFLLSIRPSFEPLSPE-----------EAAKSTVPERLGLQCVRGCEVIEIRDEEGSLMNDFTGRIKR------EEWK-----------PPKGEIRTVKIALDTAQYHIDVTEVAEKGAENVYGTFNILMRRKPKENNFKAILESIRDLM 736          
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: A0A8J5WU82_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WU82_ZIZPA)

HSP 1 Score: 191 bits (486), Expect = 3.980e-51
Identity = 115/313 (36.74%), Postives = 167/313 (53.35%), Query Frame = 1
Query:    1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939
            DA+   PL P E+++WDE  VP  + + +           G L+LPKL LQFLT HD + R  +LFRLE+ Y IR DI +A+         E D        T FRGWSR A+PI +F I  +  P+IG+  PS V A++   +S+Y P I+ EWD+L+EHDVLFL+++RP     S +           +A   T  +R+G+  VRG  V+ I DEE    N      K       EE+            PPKG  RT+++ALD AQY +D++E       + +G  ++++RR  K+NNF+A+L +  D +
Sbjct:  328 DAVNALPLYPNEQIMWDESLVPSINYSGE-----------GCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAIPHLHAYISNEGD--------TAFRGWSRMAVPIKEFKITQVKQPDIGEVKPSAVTADVTFSISSYKPQIKSEWDALKEHDVLFLLSIRPSFEPLSPE-----------EAAKSTVPERLGLQYVRGCEVIEIRDEESSLMNDFTGRIKR------EEWK-----------PPKGEIRTVKIALDTAQYHIDVTEVAENGAENVYGTFNILMRRKPKENNFKAILESIRDLM 593          
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: A0A1E5VM25_9POAL (Intron-binding protein aquarius (Fragment) n=3 Tax=Paniceae TaxID=147428 RepID=A0A1E5VM25_9POAL)

HSP 1 Score: 191 bits (485), Expect = 5.580e-51
Identity = 117/313 (37.38%), Postives = 168/313 (53.67%), Query Frame = 1
Query:    1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939
            DA+   PL P E+++WDE  VP  + + +           G L+LPKL LQFLT HD + R  +LFRLE+ Y IR DI +AV    P      +  G     T FRGWSR A+PI +F I  +  P IG+  PS V A++   +S+Y   I+ EWD+L+EHDVLFL+++RP     S +           +A   T  +R+G+  VRG  V+ I DEEG   N      K       EE+            PPKG  RT+R+ALD AQY +D++E+      + +G  ++++RR  K+NNF+A+L +  D +
Sbjct:  471 DAVNALPLYPNEQIMWDESLVPSINYSGE-----------GCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAV----PHLHAYINNEGE----TAFRGWSRMAVPIKEFKITEVKQPNIGEVKPSAVTADVTFSISSYRHQIKSEWDALKEHDVLFLLSIRPSFEPLSPE-----------EAAKSTVPERLGLQYVRGCEVIEIRDEEGTLINDFTGRIKR------EEWK-----------PPKGEIRTVRIALDTAQYHIDVTETAEKGAENVYGTFNILMRRKPKENNFKAILESIRDLM 736          
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: A0A1Z5S9K2_SORBI (Uncharacterized protein n=21 Tax=Panicoideae TaxID=147369 RepID=A0A1Z5S9K2_SORBI)

HSP 1 Score: 191 bits (484), Expect = 7.450e-51
Identity = 117/313 (37.38%), Postives = 168/313 (53.67%), Query Frame = 1
Query:    1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939
            DA+   PL P E+++WDE  VP  + + +           G L+LPKL LQFLT HD + R  +LFRLE+ Y IR DI +AV    P      +  G     T FRGWSR A+PI +F I  +  P IG+  PS V A++   +S+Y   I+ EWD+L+EHDVLFL+++RP     S +           +A   T  +R+G+  VRG  V+ I DEEG   N      K       EE+            PPKG  RT+R+ALD AQY +D++E+      + +G  ++++RR  K+NNF+A+L +  D +
Sbjct:  370 DAVNALPLYPNEQIMWDESLVPSINYSGE-----------GCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAV----PHLHAYINNEGE----TAFRGWSRMAVPIKEFKITEVKQPNIGEVKPSAVTADVTFSISSYRHQIKSEWDALKEHDVLFLLSIRPSFEPLSPE-----------EAAKSTVPERLGLQYVRGCEVIEIRDEEGTLMNDFTGRIKR------EEWK-----------PPKGEIRTVRVALDTAQYHIDVTETAEKGAENVYGTFNILMRRKPKENNFKAILESIRDLM 635          
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: A0A7R9Y825_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y825_9VIRI)

HSP 1 Score: 190 bits (483), Expect = 1.020e-50
Identity = 120/318 (37.74%), Postives = 168/318 (52.83%), Query Frame = 1
Query:    1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVS----HTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXR-RPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939
            +A+   PL PTE  LWDE    P DA  +  DA         L+LPKL LQFLT HD + R   LFRLEA + +R D++DA +R +P  R+  D  GN ++       F GW+R A+P     ++ +G P +G + PS V A+++  L +    +R+EWD LR+HDV+FL+ +RPP+    +K         PR        A R G+VRVRGA V+ + D                  G+G+  H  R      P PPKG  RT+ LALDPAQYALD    K  S    F   ++++RR  K+NNF+A+L+   D +
Sbjct:  493 EAVAALPLYPTEAALWDE-HAAPMDARYRASDAP--------LALPKLNLQFLTLHDYLLRNYALFRLEATHEVRDDVLDAAQRLRPRWRL--DGFGNAITGEGAEVEFAGWARMAVPARRAAVMKVGRPALGTAVPSAVTAHVDYSLGSLGADVREEWDRLRQHDVVFLLEMRPPSADLVEKMMGEMAGGSPRDSLAPAELAARAGLVRVRGAEVIDVRD------------------GEGKSLHE-RAADGSAPAPPKGPDRTMVLALDPAQYALD---DKDGSSERVFASHNVLLRRKPKENNFKAILTCIRDML 777          
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: UPI0009E410E5 (intron-binding protein aquarius n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E410E5)

HSP 1 Score: 190 bits (483), Expect = 1.030e-50
Identity = 118/313 (37.70%), Postives = 166/313 (53.04%), Query Frame = 1
Query:    1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939
            DA+   PL P E+++WDE  VP  + + +           G L+LPKL LQFLT HD + R  +LFRLE+ Y IR DI +AV         E D +        FRGWSR A+PI +F I  I  P IG+  PS V A +   +S+Y   IR EWDS++EHDVLFL+++RP     S++           +A   T  +R+G+  VRG  V+ ILDEEGI  N      K       +E+            PPKG  R I +ALD AQY +D+++       D +G  ++++RR  K+NNF+A+L +  D +
Sbjct:  473 DAINALPLYPNEKIMWDESVVPSINYSGE-----------GCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPHLLAYINNEGDAA--------FRGWSRMAVPIKEFKITEIKQPNIGEVKPSSVTAEVSFSISSYRAHIRSEWDSIKEHDVLFLLSIRPSFEPLSQE-----------EAAKSTVLERLGLQFVRGCEVIEILDEEGILMNDFTGRIKR------DEWK-----------PPKGDLRKIVVALDTAQYYMDVTDVSEKGTEDVYGSFNILMRRKPKENNFKAILESIRDLM 738          
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: J3LPC1_ORYBR (Uncharacterized protein n=4 Tax=Oryza TaxID=4527 RepID=J3LPC1_ORYBR)

HSP 1 Score: 190 bits (482), Expect = 1.370e-50
Identity = 116/313 (37.06%), Postives = 166/313 (53.04%), Query Frame = 1
Query:    1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939
            DA+   PL P E+++WDE  VP  + + +           G L+LPKL LQFLT HD + R  +LFRLE+ Y IR DI +AV         E D        T FRGWSR A+PI +F I  +  P IG+  PS V A++   +S+Y   I+ EWD+L+EHDVLFL+++RP     S +           +A   T  +R+G+  VRG  V+ I DEEG   N      K       EE+            PPKG  RT+++ALD AQY +D++E       + +G  ++++RR  K+NNF+A+L +  D +
Sbjct:  370 DAVNALPLYPNEQIMWDESLVPSINYSGE-----------GCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPHLHAYINNEGD--------TAFRGWSRMAVPIKEFKITEVKQPNIGEVKPSAVSADVTFSISSYKSQIKSEWDNLKEHDVLFLLSIRPSFEPLSPE-----------EAAKSTVPERLGLQYVRGCEVIEIRDEEGSLMNDFTGRIKR------EEWK-----------PPKGEIRTVKIALDTAQYHIDVTEVAEKGAENVYGTFNILMRRKPKENNFKAILESIRDLM 635          
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: D8TS23_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TS23_VOLCA)

HSP 1 Score: 190 bits (482), Expect = 1.420e-50
Identity = 118/314 (37.58%), Postives = 165/314 (52.55%), Query Frame = 1
Query:    1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPV-PPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939
            + +   PL PTE LLWDE ++P S        ++   G  GAL+LPKL LQFLT HD + R  HLFRLEA Y IR DI D +RR   +     D+         F GW+R ALP+  F I  +  P +GD+ P+ V AN+ +D       +R EWD L++HDVLFL+ +RPPA +++             D  +   A++ G+V VRG  V+ + DE G   N         TG            V R  V PP+G  RT+ +ALD AQY LD++   +    D +   +L++RR  K+NNF+AVL +  D +
Sbjct:  741 EVVNEMPLYPTEGLLWDESQIPAS--------SEHYTG-EGALALPKLNLQFLTTHDYLLRNFHLFRLEATYEIREDISDVLRR---IGAYWDDDD-----RVRFAGWARMALPLNSFKITEVRKPNVGDAKPAAVTANVVIDTRPLRGDVRAEWDELKQHDVLFLMTVRPPAAAAAAALFA--------DGREPNAAEKHGLVYVRGCEVIEVRDEGGRLMND-------FTG-----------RVKRDEVKPPEGFSRTLTVALDTAQYQLDMNTMAKHKSEDPYATFNLLMRRKPKENNFKAVLESIRDLM 1011          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I0WRR1_9ASPA2.810e-5337.06Regulator of nonsense transcripts 1 like n=2 Tax=D... [more]
A0A1D6K4P2_MAIZE1.960e-5137.70p-loop containing nucleoside triphosphate hydrolas... [more]
A0A0E0GNH0_ORYNI2.250e-5137.38Uncharacterized protein n=13 Tax=Magnoliopsida Tax... [more]
A0A8J5WU82_ZIZPA3.980e-5136.74Uncharacterized protein n=1 Tax=Zizania palustris ... [more]
A0A1E5VM25_9POAL5.580e-5137.38Intron-binding protein aquarius (Fragment) n=3 Tax... [more]
A0A1Z5S9K2_SORBI7.450e-5137.38Uncharacterized protein n=21 Tax=Panicoideae TaxID... [more]
A0A7R9Y825_9VIRI1.020e-5037.74Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
UPI0009E410E51.030e-5037.70intron-binding protein aquarius n=1 Tax=Phalaenops... [more]
J3LPC1_ORYBR1.370e-5037.06Uncharacterized protein n=4 Tax=Oryza TaxID=4527 R... [more]
D8TS23_VOLCA1.420e-5037.58Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70413contigM-pyrifera_M_contig70413:6..1175 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score193.7
Seed ortholog evalue1.3e-46
Seed eggNOG ortholog4537.OPUNC03G18660.1
Preferred nameAQR
KEGG koko:K12874
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Intron-binding protein aquarius N-terminus
EggNOG OGs37MCQ@33090,3GDBD@35493,3I7T6@38820,3KR9Y@4447,KOG1806@1,KOG1806@2759
Ec32 ortholog descriptionAquarius intron-binding protein similar to aquarius
Ec32 orthologEc-23_001250.1
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons2
Model size939
Cds size939
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816596.8639996-CDS-M-pyrifera_M_contig70413:5..921622816596.8639996-CDS-M-pyrifera_M_contig70413:5..92Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70413 6..92 -
1692278068.2640758-CDS-M-pyrifera_M_contig70413:5..921692278068.2640758-CDS-M-pyrifera_M_contig70413:5..92Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70413 6..92 -
1622816596.8781846-CDS-M-pyrifera_M_contig70413:323..11751622816596.8781846-CDS-M-pyrifera_M_contig70413:323..1175Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70413 324..1175 -
1692278068.2771072-CDS-M-pyrifera_M_contig70413:323..11751692278068.2771072-CDS-M-pyrifera_M_contig70413:323..1175Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70413 324..1175 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70413.16812.1prot_M-pyrifera_M_contig70413.16812.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig70413 6..1175 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig70413.16812.1

>prot_M-pyrifera_M_contig70413.16812.1 ID=prot_M-pyrifera_M_contig70413.16812.1|Name=mRNA_M-pyrifera_M_contig70413.16812.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=313bp
DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGL
QFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPV
SHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPS
IRKEWDSLREHDVLFLVALRPPATSSSKKPTSSSSRRPRPDAEDCTFAQR
MGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRG
PVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDN
NFRAVLSAAGDAI
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mRNA from alignment at M-pyrifera_M_contig70413:6..1175-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig70413.16812.1 ID=mRNA_M-pyrifera_M_contig70413.16812.1|Name=mRNA_M-pyrifera_M_contig70413.16812.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig70413:6..1175- (Macrocystis pyrifera P11B4 male)
GATGCATTACGTCGTACTCCCCTTCTTCCAACTGAAGAGCTTCTTTGGGA TGAATTGCGCGTGCCACCATCGGATGCGACAACAAAACGCGGTGATGCTG ATTCTGCGCTTGGAACTTCTGGTGCACTGTCCCTGCCAAAGCTTGGTCTT CAGTTCCTTACTCCCCATGACCTCATCGCAAGGCCAATGCATTTGTTTCG TCTTGAAGCTGCGTATGGAATTCGTGCGGATATTGTAGATGCTGTTCGTC GTTCACAACCCGTAAAGCGTGTAGAGCACGATGAGTCTGGGAATCCTGTT TCTCATACCGTGTTTCGTGGTTGGTCACGCAAGGCTCTACCTATCGCAGA CTTTAACATTGTGCACATTGGACCACCAGAAATCGGTGATTCACACCCTT CCAAAGTCATTGCCAACCTCGAAGTCGATTTGAGTGCATACGCACCCAGC ATTCGGAAAGAATGGGACTCTTTACGGGAGCATGATGTCCTCTTTCTTGT CGCTCTCCGTCCACCAGCGACTTCGTCGTCCAAGAAACCCACCTCCTCCT CTTCTCGTCGACCACGTCCAGATGCTGAAGATTGCACATTTGCACAACGG ATGGGTGTAGTTCGAGTAAGAGGGGCAGTAGTTCTGAGCATACTTGATGA AGAAGGAATTGACTTCAACTCTCCCTTTGCTGAAGAGAAACCATCCACAG GTGGAGATGGTGAGGAATTTCATCACCCCAGAACACTTGTTCCACGTGGT CCCGTTCCACCAAAGGGATTGAAACGAACTATTCGTCTTGCTCTTGATCC TGCACAATATGCTTTAGACATCTCTGAATCGAAGAGAACCTCTGATCTTG ATGTTGATACGGGATTAGGACCTCCAAAGTCTTCTATCGCAACATCATCA TCATCGTCATCATCATCATCATCATCATCATCATCCTCTGCTGCTGCCAC TACCACCACAACAACCACAAGCACTACTACATCATCATCATCGTCTTCGT CTTCGACGTCGTCGACATCCATGTTGACTGCTACGGTATCGTTGTGGGAT GAGATGGAAGGGAGAGATGAACCTGTGTATGAGGCATTTGGAAGGGGGTC GTTGGTGGTGAGGAGAGATGGGAAGGATAATAACTTCCGTGCAGTTCTGT CTGCTGCAGGAGATGCAATT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig70413:6..1175-

>mRNA_M-pyrifera_M_contig70413.16812.1 ID=mRNA_M-pyrifera_M_contig70413.16812.1|Name=mRNA_M-pyrifera_M_contig70413.16812.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1878bp|location=Sequence derived from alignment at M-pyrifera_M_contig70413:6..1175- (Macrocystis pyrifera P11B4 male)
GATGCATTACGTCGTACTCCCCTTCTTCCAACTGAAGAGCTTCTTTGGGA
TGAATTGCGCGTGCCACCATCGGATGCGACAACAAAACGCGGTGATGCTG
ATTCTGCGCTTGGAACTTCTGGTGCACTGTCCCTGCCAAAGCTTGGTCTT
CAGTTCCTTACTCCCCATGACCTCATCGCAAGGCCAATGCATTTGTTTCG
TCTTGAAGCTGCGTATGGAATTCGTGCGGATATTGTAGATGCTGTTCGTC
GTTCACAACCCGTAAAGCGTGTAGAGCACGATGAGTCTGGGAATCCTGTT
TCTCATACCGTGTTTCGTGGTTGGTCACGCAAGGCTCTACCTATCGCAGA
CTTTAACATTGTGCACATTGGACCACCAGAAATCGGTGATTCACACCCTT
CCAAAGTCATTGCCAACCTCGAAGTCGATTTGAGTGCATACGCACCCAGC
ATTCGGAAAGAATGGGACTCTTTACGGGAGCATGATGTCCTCTTTCTTGT
CGCTCTCCGTCCACCAGCGACTTCGTCGTCCAAGAAACCCACCTCCTCCT
CTTCTCGTCGACCACGTCCAGATGCTGAAGATTGCACATTTGCACAACGG
ATGGGTGTAGTTCGAGTAAGAGGGGCAGTAGTTCTGAGCATACTTGATGA
AGAAGGAATTGACTTCAACTCTCCCTTTGCTGAAGAGAAACCATCCACAG
GTGGAGATGGTGAGGAATTTCATCACCCCAGAACACTTGTTCCACGTGGT
CCCGTTCCACCAAAGGGATTGAAACGAACTATTCGTCTTGCTCTTGATCC
TGCACAATATGCTTTAGACATCTCTGAATCGAAGAGAACCTCTGATCTTG
ATGATGCATTACGTCGTACTCCCCTTCTTCCAACTGAAGAGCTTCTTTGG
GATGAATTGCGCGTGCCACCATCGGATGCGACAACAAAACGCGGTGATGC
TGATTCTGCGCTTGGAACTTCTGGTGCACTGTCCCTGCCAAAGCTTGGTC
TTCAGTTCCTTACTCCCCATGACCTCATCGCAAGGCCAATGCATTTGTTT
CGTCTTGAAGCTGCGTATGGAATTCGTGCGGATATTGTAGATGCTGTTCG
TCGTTCACAACCCGTAAAGCGTGTAGAGCACGATGAGTCTGGGAATCCTG
TTTCTCATACCGTGTTTCGTGGTTGGTCACGCAAGGCTCTACCTATCGCA
GACTTTAACATTGTGCACATTGGACCACCAGAAATCGGTGATTCACACCC
TTCCAAAGTCATTGCCAACCTCGAAGTCGATTTGAGTGCATACGCACCCA
GCATTCGGAAAGAATGGGACTCTTTACGGGAGCATGATGTCCTCTTTCTT
GTCGCTCTCCGTCCACCAGCGACTTCGTCGTCCAAGAAACCCACCTCCTC
CTCTTCTCGTCGACCACGTCCAGATGCTGAAGATTGCACATTTGCACAAC
GGATGGGTGTAGTTCGAGTAAGAGGGGCAGTAGTTCTGAGCATACTTGAT
GAAGAAGGAATTGACTTCAACTCTCCCTTTGCTGAAGAGAAACCATCCAC
AGGTGGAGATGGTGAGGAATTTCATCACCCCAGAACACTTGTTCCACGTG
GTCCCGTTCCACCAAAGGGATTGAAACGAACTATTCGTCTTGCTCTTGAT
CCTGCACAATATGCTTTAGACATCTCTGAATCGAAGAGAACCTCTGATCT
TGATGCATTTGGAAGGGGGTCGTTGGTGGTGAGGAGAGATGGGAAGGATA
ATAACTTCCGTGCAGTTCTGTCTGCTGCAGGAGATGCAATTGCATTTGGA
AGGGGGTCGTTGGTGGTGAGGAGAGATGGGAAGGATAATAACTTCCGTGC
AGTTCTGTCTGCTGCAGGAGATGCAATT
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