mRNA_M-pyrifera_M_contig70413.16812.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: A0A2I0WRR1_9ASPA (Regulator of nonsense transcripts 1 like n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WRR1_9ASPA) HSP 1 Score: 197 bits (502), Expect = 2.810e-53 Identity = 116/313 (37.06%), Postives = 169/313 (53.99%), Query Frame = 1 Query: 1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939 DA+ PL P E+++WDE VP + + + G L+LPKL LQFLT HD + R +LFRLE+ Y IR DI +AV E D T FRGWSR A+P+ +F I + P IG+ PS V A + +S+Y IR EWDS++EHDVLFL+++RP S++ +A CT +R+G+ VRG V+ + DEEG+ N K +E+ PPKG RTI +ALD AQY +D++++ +D +G ++++RR K+NNF+A+L + D + Sbjct: 380 DAINALPLYPNEKIMWDESLVPSINYSGE-----------GCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPHLLAYINKEGD--------TAFRGWSRMAVPVREFKITEVKQPNIGEVKPSSVTAEVSFSISSYRAHIRSEWDSIKEHDVLFLLSIRPSFEPLSQE-----------EAAKCTVLERLGLQYVRGCEVIEVRDEEGVLMNDFTGSIKR------DEWK-----------PPKGDLRTIVVALDTAQYHMDVTDASDRGAMDVYGSFNILMRRKPKENNFKAILESIRDLM 645
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: A0A1D6K4P2_MAIZE (p-loop containing nucleoside triphosphate hydrolase superfamily protein n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6K4P2_MAIZE) HSP 1 Score: 192 bits (487), Expect = 1.960e-51 Identity = 118/313 (37.70%), Postives = 168/313 (53.67%), Query Frame = 1 Query: 1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939 DA+ PL P E+++WDE VP + + + G L+LPKL LQFLT HD + R +LFRLE+ Y IR DI +AV P + G T FRGWSR A+PI F I + P IG+ PS V A++ +S+Y I+ EWD+L+EHDVLFL+++RP S + +AE T +R+G+ VRG V+ I DEEG N K EE+ PPKG RT+R+ALD AQY +D++E+ + +G ++++RR K+NNF+A+L + D + Sbjct: 471 DAVNALPLYPNEQIMWDESLVPSINYSGE-----------GCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAV----PHLHAYINNEGE----TAFRGWSRMAVPIKGFKITEVKQPNIGEVKPSAVTADVTFSISSYRYQIKSEWDALKEHDVLFLLSIRPSFEPLSPE-----------EAEKSTVPERLGLQYVRGCEVIEIRDEEGALMNDFTGRIKR------EEWK-----------PPKGEIRTVRVALDTAQYHIDVTETAEKGTENVYGTFNILMRRKPKENNFKAILESIRDLM 736
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: A0A0E0GNH0_ORYNI (Uncharacterized protein n=13 Tax=Magnoliopsida TaxID=3398 RepID=A0A0E0GNH0_ORYNI) HSP 1 Score: 192 bits (488), Expect = 2.250e-51 Identity = 117/313 (37.38%), Postives = 167/313 (53.35%), Query Frame = 1 Query: 1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939 DA+ PL P E+++WDE VP + + + G L+LPKL LQFLT HD + R +LFRLE+ Y IR DI +AV E D T FRGWSR A+PI +F I + P IG+ PS V A++ +S+Y P I+ EWD+L+EHDVLFL+++RP S + +A T +R+G+ VRG V+ I DEEG N K EE+ PPKG RT+++ALD AQY +D++E + +G ++++RR K+NNF+A+L + D + Sbjct: 471 DAVNALPLYPNEQIMWDESLVPSINYSGE-----------GCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPHLHAYINNEGD--------TAFRGWSRMAVPIKEFRITEMKQPNIGEVKPSAVTADVTFSISSYKPQIKSEWDALKEHDVLFLLSIRPSFEPLSPE-----------EAAKSTVPERLGLQCVRGCEVIEIRDEEGSLMNDFTGRIKR------EEWK-----------PPKGEIRTVKIALDTAQYHIDVTEVAEKGAENVYGTFNILMRRKPKENNFKAILESIRDLM 736
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: A0A8J5WU82_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WU82_ZIZPA) HSP 1 Score: 191 bits (486), Expect = 3.980e-51 Identity = 115/313 (36.74%), Postives = 167/313 (53.35%), Query Frame = 1 Query: 1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939 DA+ PL P E+++WDE VP + + + G L+LPKL LQFLT HD + R +LFRLE+ Y IR DI +A+ E D T FRGWSR A+PI +F I + P+IG+ PS V A++ +S+Y P I+ EWD+L+EHDVLFL+++RP S + +A T +R+G+ VRG V+ I DEE N K EE+ PPKG RT+++ALD AQY +D++E + +G ++++RR K+NNF+A+L + D + Sbjct: 328 DAVNALPLYPNEQIMWDESLVPSINYSGE-----------GCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAIPHLHAYISNEGD--------TAFRGWSRMAVPIKEFKITQVKQPDIGEVKPSAVTADVTFSISSYKPQIKSEWDALKEHDVLFLLSIRPSFEPLSPE-----------EAAKSTVPERLGLQYVRGCEVIEIRDEESSLMNDFTGRIKR------EEWK-----------PPKGEIRTVKIALDTAQYHIDVTEVAENGAENVYGTFNILMRRKPKENNFKAILESIRDLM 593
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: A0A1E5VM25_9POAL (Intron-binding protein aquarius (Fragment) n=3 Tax=Paniceae TaxID=147428 RepID=A0A1E5VM25_9POAL) HSP 1 Score: 191 bits (485), Expect = 5.580e-51 Identity = 117/313 (37.38%), Postives = 168/313 (53.67%), Query Frame = 1 Query: 1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939 DA+ PL P E+++WDE VP + + + G L+LPKL LQFLT HD + R +LFRLE+ Y IR DI +AV P + G T FRGWSR A+PI +F I + P IG+ PS V A++ +S+Y I+ EWD+L+EHDVLFL+++RP S + +A T +R+G+ VRG V+ I DEEG N K EE+ PPKG RT+R+ALD AQY +D++E+ + +G ++++RR K+NNF+A+L + D + Sbjct: 471 DAVNALPLYPNEQIMWDESLVPSINYSGE-----------GCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAV----PHLHAYINNEGE----TAFRGWSRMAVPIKEFKITEVKQPNIGEVKPSAVTADVTFSISSYRHQIKSEWDALKEHDVLFLLSIRPSFEPLSPE-----------EAAKSTVPERLGLQYVRGCEVIEIRDEEGTLINDFTGRIKR------EEWK-----------PPKGEIRTVRIALDTAQYHIDVTETAEKGAENVYGTFNILMRRKPKENNFKAILESIRDLM 736
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: A0A1Z5S9K2_SORBI (Uncharacterized protein n=21 Tax=Panicoideae TaxID=147369 RepID=A0A1Z5S9K2_SORBI) HSP 1 Score: 191 bits (484), Expect = 7.450e-51 Identity = 117/313 (37.38%), Postives = 168/313 (53.67%), Query Frame = 1 Query: 1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939 DA+ PL P E+++WDE VP + + + G L+LPKL LQFLT HD + R +LFRLE+ Y IR DI +AV P + G T FRGWSR A+PI +F I + P IG+ PS V A++ +S+Y I+ EWD+L+EHDVLFL+++RP S + +A T +R+G+ VRG V+ I DEEG N K EE+ PPKG RT+R+ALD AQY +D++E+ + +G ++++RR K+NNF+A+L + D + Sbjct: 370 DAVNALPLYPNEQIMWDESLVPSINYSGE-----------GCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAV----PHLHAYINNEGE----TAFRGWSRMAVPIKEFKITEVKQPNIGEVKPSAVTADVTFSISSYRHQIKSEWDALKEHDVLFLLSIRPSFEPLSPE-----------EAAKSTVPERLGLQYVRGCEVIEIRDEEGTLMNDFTGRIKR------EEWK-----------PPKGEIRTVRVALDTAQYHIDVTETAEKGAENVYGTFNILMRRKPKENNFKAILESIRDLM 635
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: A0A7R9Y825_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y825_9VIRI) HSP 1 Score: 190 bits (483), Expect = 1.020e-50 Identity = 120/318 (37.74%), Postives = 168/318 (52.83%), Query Frame = 1 Query: 1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVS----HTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXR-RPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939 +A+ PL PTE LWDE P DA + DA L+LPKL LQFLT HD + R LFRLEA + +R D++DA +R +P R+ D GN ++ F GW+R A+P ++ +G P +G + PS V A+++ L + +R+EWD LR+HDV+FL+ +RPP+ +K PR A R G+VRVRGA V+ + D G+G+ H R P PPKG RT+ LALDPAQYALD K S F ++++RR K+NNF+A+L+ D + Sbjct: 493 EAVAALPLYPTEAALWDE-HAAPMDARYRASDAP--------LALPKLNLQFLTLHDYLLRNYALFRLEATHEVRDDVLDAAQRLRPRWRL--DGFGNAITGEGAEVEFAGWARMAVPARRAAVMKVGRPALGTAVPSAVTAHVDYSLGSLGADVREEWDRLRQHDVVFLLEMRPPSADLVEKMMGEMAGGSPRDSLAPAELAARAGLVRVRGAEVIDVRD------------------GEGKSLHE-RAADGSAPAPPKGPDRTMVLALDPAQYALD---DKDGSSERVFASHNVLLRRKPKENNFKAILTCIRDML 777
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: UPI0009E410E5 (intron-binding protein aquarius n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E410E5) HSP 1 Score: 190 bits (483), Expect = 1.030e-50 Identity = 118/313 (37.70%), Postives = 166/313 (53.04%), Query Frame = 1 Query: 1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939 DA+ PL P E+++WDE VP + + + G L+LPKL LQFLT HD + R +LFRLE+ Y IR DI +AV E D + FRGWSR A+PI +F I I P IG+ PS V A + +S+Y IR EWDS++EHDVLFL+++RP S++ +A T +R+G+ VRG V+ ILDEEGI N K +E+ PPKG R I +ALD AQY +D+++ D +G ++++RR K+NNF+A+L + D + Sbjct: 473 DAINALPLYPNEKIMWDESVVPSINYSGE-----------GCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPHLLAYINNEGDAA--------FRGWSRMAVPIKEFKITEIKQPNIGEVKPSSVTAEVSFSISSYRAHIRSEWDSIKEHDVLFLLSIRPSFEPLSQE-----------EAAKSTVLERLGLQFVRGCEVIEILDEEGILMNDFTGRIKR------DEWK-----------PPKGDLRKIVVALDTAQYYMDVTDVSEKGTEDVYGSFNILMRRKPKENNFKAILESIRDLM 738
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: J3LPC1_ORYBR (Uncharacterized protein n=4 Tax=Oryza TaxID=4527 RepID=J3LPC1_ORYBR) HSP 1 Score: 190 bits (482), Expect = 1.370e-50 Identity = 116/313 (37.06%), Postives = 166/313 (53.04%), Query Frame = 1 Query: 1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPVPPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939 DA+ PL P E+++WDE VP + + + G L+LPKL LQFLT HD + R +LFRLE+ Y IR DI +AV E D T FRGWSR A+PI +F I + P IG+ PS V A++ +S+Y I+ EWD+L+EHDVLFL+++RP S + +A T +R+G+ VRG V+ I DEEG N K EE+ PPKG RT+++ALD AQY +D++E + +G ++++RR K+NNF+A+L + D + Sbjct: 370 DAVNALPLYPNEQIMWDESLVPSINYSGE-----------GCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPHLHAYINNEGD--------TAFRGWSRMAVPIKEFKITEVKQPNIGEVKPSAVSADVTFSISSYKSQIKSEWDNLKEHDVLFLLSIRPSFEPLSPE-----------EAAKSTVPERLGLQYVRGCEVIEIRDEEGSLMNDFTGRIKR------EEWK-----------PPKGEIRTVKIALDTAQYHIDVTEVAEKGAENVYGTFNILMRRKPKENNFKAILESIRDLM 635
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Match: D8TS23_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TS23_VOLCA) HSP 1 Score: 190 bits (482), Expect = 1.420e-50 Identity = 118/314 (37.58%), Postives = 165/314 (52.55%), Query Frame = 1 Query: 1 DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLQFLTPHDLIARPMHLFRLEAAYGIRADIVDAVRRSQPVKRVEHDESGNPVSHTVFRGWSRKALPIADFNIVHIGPPEIGDSHPSKVIANLEVDLSAYAPSIRKEWDSLREHDVLFLVALRPPATSSSKKXXXXXXRRPRPDAEDCTFAQRMGVVRVRGAVVLSILDEEGIDFNSPFAEEKPSTGGDGEEFHHPRTLVPRGPV-PPKGLKRTIRLALDPAQYALDISESKRTSDLDAFGRGSLVVRRDGKDNNFRAVLSAAGDAI 939 + + PL PTE LLWDE ++P S ++ G GAL+LPKL LQFLT HD + R HLFRLEA Y IR DI D +RR + D+ F GW+R ALP+ F I + P +GD+ P+ V AN+ +D +R EWD L++HDVLFL+ +RPPA +++ D + A++ G+V VRG V+ + DE G N TG V R V PP+G RT+ +ALD AQY LD++ + D + +L++RR K+NNF+AVL + D + Sbjct: 741 EVVNEMPLYPTEGLLWDESQIPAS--------SEHYTG-EGALALPKLNLQFLTTHDYLLRNFHLFRLEATYEIREDISDVLRR---IGAYWDDDD-----RVRFAGWARMALPLNSFKITEVRKPNVGDAKPAAVTANVVIDTRPLRGDVRAEWDELKQHDVLFLMTVRPPAAAAAAALFA--------DGREPNAAEKHGLVYVRGCEVIEVRDEGGRLMND-------FTG-----------RVKRDEVKPPEGFSRTLTVALDTAQYQLDMNTMAKHKSEDPYATFNLLMRRKPKENNFKAVLESIRDLM 1011 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70413.16812.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig70413.16812.1 >prot_M-pyrifera_M_contig70413.16812.1 ID=prot_M-pyrifera_M_contig70413.16812.1|Name=mRNA_M-pyrifera_M_contig70413.16812.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=313bp DALRRTPLLPTEELLWDELRVPPSDATTKRGDADSALGTSGALSLPKLGLback to top mRNA from alignment at M-pyrifera_M_contig70413:6..1175- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig70413.16812.1 ID=mRNA_M-pyrifera_M_contig70413.16812.1|Name=mRNA_M-pyrifera_M_contig70413.16812.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig70413:6..1175- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig70413:6..1175- >mRNA_M-pyrifera_M_contig70413.16812.1 ID=mRNA_M-pyrifera_M_contig70413.16812.1|Name=mRNA_M-pyrifera_M_contig70413.16812.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1878bp|location=Sequence derived from alignment at M-pyrifera_M_contig70413:6..1175- (Macrocystis pyrifera P11B4 male)back to top |