mRNA_M-pyrifera_M_contig7019.16776.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7019.16776.1 vs. uniprot
Match: D8LRN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN8_ECTSI) HSP 1 Score: 250 bits (638), Expect = 8.440e-77 Identity = 129/172 (75.00%), Postives = 149/172 (86.63%), Query Frame = 1 Query: 1 SNGETKKLTVGEIQLSVEVTHYVVPSKEPAAYLQAKATNDTDYLLLASEDVSIFFGNSFAAKTSLESVSPGETFQAFLGIDPSVKIKVAPPRKTTRKRGIFSKSNQLTYTQSTSISNKKQKTVTCVVMDAMPRATDEVIKVVLQEPAPSSVTSSEAITDEVLVSRALEMFGG 516 SNG+ KKLTVGE+QLSVEVTHY+VP+K PAAYLQAKATN+TDYLLLAS DVSIFF NSF KTSL SVSPGE+FQ FLGIDP+VKI VAPPRKT++KRGIFSKSN +T+T ST ISN K VTCVV+DA+PR+TD++IKV L+EP P+SV+ EAITD+ LVS ALE FGG Sbjct: 399 SNGQMKKLTVGELQLSVEVTHYIVPAKAPAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAPPRKTSKKRGIFSKSNHVTHTHSTLISNNKTVPVTCVVVDALPRSTDDIIKVTLKEPLPASVSECEAITDDSLVSIALETFGG 570
BLAST of mRNA_M-pyrifera_M_contig7019.16776.1 vs. uniprot
Match: D8LRN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN7_ECTSI) HSP 1 Score: 248 bits (633), Expect = 5.820e-76 Identity = 129/172 (75.00%), Postives = 149/172 (86.63%), Query Frame = 1 Query: 1 SNGETKKLTVGEIQLSVEVTHYVVPSKEPAAYLQAKATNDTDYLLLASEDVSIFFGNSFAAKTSLESVSPGETFQAFLGIDPSVKIKVAPPRKTTRKRGIFSKSNQLTYTQSTSISNKKQKTVTCVVMDAMPRATDEVIKVVLQEPAPSSVTSSEAITDEVLVSRALEMFGG 516 SNG+ KKLTVGE+QLSVEVTHY+VP+K PAAYLQAKATN+TDYLLLAS +VSIFF NSF KTSL SVSPGE+FQ FLGIDP+VKI VAPPRKT+ KRGI SKSN +T+T ST ISN K+ VTCVV+DAMPR+TD+VIKV L+EP P+SV+ EAITD+ LVS ALEM+GG Sbjct: 410 SNGQMKKLTVGELQLSVEVTHYIVPAKAPAAYLQAKATNNTDYLLLASNNVSIFFDNSFVTKTSLSSVSPGESFQTFLGIDPAVKITVAPPRKTSTKRGIISKSNHVTHTHSTLISNTKKVPVTCVVVDAMPRSTDDVIKVTLKEPLPASVSECEAITDDSLVSVALEMYGG 581
BLAST of mRNA_M-pyrifera_M_contig7019.16776.1 vs. uniprot
Match: D8LRN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN5_ECTSI) HSP 1 Score: 245 bits (626), Expect = 1.050e-74 Identity = 127/169 (75.15%), Postives = 147/169 (86.98%), Query Frame = 1 Query: 1 SNGETKKLTVGEIQLSVEVTHYVVPSKEPAAYLQAKATNDTDYLLLASEDVSIFFGNSFAAKTSLESVSPGETFQAFLGIDPSVKIKVAPPRKTTRKRGIFSKSNQLTYTQSTSISNKKQKTVTCVVMDAMPRATDEVIKVVLQEPAPSSVTSSEAITDEVLVSRALEM 507 SN + KKLTVG +QLS EV+HY+VP+KE AAYLQAKATN+TDYLLLAS DVSIFF NSF KTSL SVSPGE+FQ FLGIDP+VKI VAPPRKT++KRGIFSKSN +T+T STSISNKK+ VTCVV+DAMPR+T+E+IKV L++P PS VT SEAITD+VL S ALEM Sbjct: 441 SNAQAKKLTVGVLQLSAEVSHYLVPAKESAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLTSVSPGESFQTFLGIDPAVKITVAPPRKTSKKRGIFSKSNHVTHTHSTSISNKKKVPVTCVVVDAMPRSTNEIIKVTLKQPPPSGVTESEAITDDVLASAALEM 609
BLAST of mRNA_M-pyrifera_M_contig7019.16776.1 vs. uniprot
Match: D8LRN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN6_ECTSI) HSP 1 Score: 240 bits (613), Expect = 2.210e-73 Identity = 127/171 (74.27%), Postives = 146/171 (85.38%), Query Frame = 1 Query: 1 SNGETKKLTVGEIQLSVEVTHYVVPSKEPAAYLQAKATNDTDYLLLASEDVSIFFGNSFAAKTSLESVSPGETFQAFLGIDPSVKIKVAPPRKTTRKRGIFSKSNQLTYTQSTSISNKKQKTVTCVVMDAMPRATDEVIKVVLQEPAPSSVTSSEAITDEVLVSRALEMFG 513 SNG+ KKLTVG +QLSVEVTHY+VP+K PAAYLQAKATN+TDYLLLAS DVSIFF NSF KTSL SVSPGE+FQ FLGIDP+VKI VAPPRKT++KRGI SKSN +T+T ST ISN K+ VT VV+DAMPR+TD+VIKV L+EP +SV+ EAITD+ LVS ALEMFG Sbjct: 367 SNGQMKKLTVGVLQLSVEVTHYIVPAKAPAAYLQAKATNNTDYLLLASNDVSIFFDNSFVTKTSLASVSPGESFQTFLGIDPAVKIIVAPPRKTSKKRGIISKSNHVTHTHSTLISNNKKVPVTFVVVDAMPRSTDDVIKVTLKEPLSASVSECEAITDDALVSIALEMFG 537
BLAST of mRNA_M-pyrifera_M_contig7019.16776.1 vs. uniprot
Match: D8LRM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM9_ECTSI) HSP 1 Score: 218 bits (554), Expect = 1.580e-63 Identity = 112/174 (64.37%), Postives = 141/174 (81.03%), Query Frame = 1 Query: 4 NGETKKLTVGEIQLSVEVTHYVVPSKEPAAYLQAKATNDTDYLLLASEDVSIFFGNSFAAKTSLESVSPGETFQAFLGIDPSVKIKVAPPRKTTRKRGIFSKSNQLTYTQSTSISNKKQKTVTCVVMDAMPRATDEVIKVVLQEPAPSSVTSS-EAITDEVLVSRALEMFGGTG 522 NGE+ KL+V +QLS +V HYVVPS++ A+LQA ATN+TDYLLLASEDVSIFF NSF AKTSL SVSPGE+FQ FLGIDP+VK+KVAPPRKT++++G+F K + + + ST ISNKK+ VTCVV++A+P +T+E+IKV LQ+PAP+ VT S EA+ DE LV L MFGG G Sbjct: 529 NGESTKLSVAVLQLSTDVVHYVVPSRDATAFLQANATNNTDYLLLASEDVSIFFDNSFVAKTSLTSVSPGESFQTFLGIDPAVKVKVAPPRKTSKQKGLFGKVDHVAHIHSTVISNKKKVPVTCVVIEALPLSTNEIIKVKLQQPAPAKVTESVEAVNDEALVDAGLAMFGGQG 702
BLAST of mRNA_M-pyrifera_M_contig7019.16776.1 vs. uniprot
Match: A0A6H5KAH2_9PHAE (DUF4139 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAH2_9PHAE) HSP 1 Score: 165 bits (418), Expect = 4.300e-45 Identity = 107/237 (45.15%), Postives = 134/237 (56.54%), Query Frame = 1 Query: 1 SNGETKKLTVGEIQLSVEVTHYVVPSKEPAAYLQAK-----------------------------ATNDTDYLLLASEDVSIFFGNSFAAKTSLESVSPGETFQAFLGIDPSVKIKVAPPRKTTRKRGIFSKSNQLTYT-------QSTSISNKKQKTVTCVVMDAMPRATDEV--------------------------------IKVVLQEPAPSSVTSSEAITDEVLVSRALEM 507 SN KKLTVG +QLS EV+HYVVP+KE AAYLQAK ATN+TDYLLLAS DVSIFF NSF KTSL SV PGE+FQ FLGIDP+VKI V P RKT++KRGIFSKSN +T+T Q+ + ++K +T++ + A+ +T+ + V+L++P PSSV+ SEAITD+ L S ALEM Sbjct: 248 SNARAKKLTVGVLQLSAEVSHYVVPAKESAAYLQAKEYVSTHRHQGSVPSKVKVSMLLLILHANQATNNTDYLLLASNDVSIFFDNSFITKTSLTSVCPGESFQTFLGIDPAVKITVGPLRKTSKKRGIFSKSNHVTHTHRYRSCTQTITEIDEKSRTISFETLTAVAGSTNATHVSMLASVFRYARNWRFVAHFDRSTSISNKKKVPVILKQPPPSSVSESEAITDDALASAALEM 484
BLAST of mRNA_M-pyrifera_M_contig7019.16776.1 vs. uniprot
Match: A0A836CA38_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA38_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.210e-39 Identity = 96/248 (38.71%), Postives = 131/248 (52.82%), Query Frame = 1 Query: 1 SNGETKKLTVGEIQLSVEVTHYVVPSKEPAAYL------------------------------------------------QAKATNDTDYLLLASEDVSIFFGNSFAAKTSLESVSPGETFQAFLGIDPSVKIK--------------------------VAPPRKTTRKRGIFSKSNQLTYTQSTSISNKKQKTVTCVVMDAMPRATDEVIKVVLQEPAPSSVTSSEAITDEVLVSRALEMFGGTG 522 S+ KKLTVG ++LS +VTHYVVP+ E AAYL +AK N TDYLLLAS+DVSIFF N F KTSL +VSPGE F FLG+DP+VK+ APPRKTTR+RG+ SK+ +T+ T+++N K +T ++DA+PR+++++IKV+L++PAP++VT +E LVS ALE+ G G Sbjct: 569 SDFTAKKLTVGILELSADVTHYVVPALEAAAYLXXXXXXXXXXXXKVRAAREALPLAKRHVXXXXXXXXXXXXXXXXXXXXKAKVLNTTDYLLLASDDVSIFFDNRFVTKTSLRTVSPGEGFDVFLGVDPAVKVSGSTDARARVDAGXXXXXXXXXXXXXXYAPPRKTTRRRGLLSKTQLVTHAHCTTLNNAKAVPITVALVDAVPRSSEDLIKVMLKDPAPNTVTDVSVDANEALVSAALELLEGEG 816
BLAST of mRNA_M-pyrifera_M_contig7019.16776.1 vs. uniprot
Match: A0A139AUS0_GONPJ (DUF4139 domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AUS0_GONPJ) HSP 1 Score: 110 bits (276), Expect = 2.510e-25 Identity = 63/166 (37.95%), Postives = 97/166 (58.43%), Query Frame = 1 Query: 13 TKKLTVGEIQLSVEVTHYVVPSKEPAAYLQAKATNDTDYLLLASEDVSIFFGNSFAAKTSLESVSPGETFQAFLGIDPSVKIKVAPPRKTTRKRGIFSKSNQLTYTQSTSISNKKQKTVTCVVMDAMPRATDEVIKVVLQEPA-PSSVTSSEAITDEVLVSRALEM 507 T K+TV I LS + H+ P YL+AK ND++Y LL S+F N+F AK++L++VSP ETF+ LG+DPS+++ P KTT GI SKS L +TQ+ + N K + V++D +P + DE +KV L +P P+ V + + + +++R M Sbjct: 245 THKVTVAIIDLSPKFLHFTYPRASEYVYLKAKVKNDSEYALLPGP-ASVFLDNNFVAKSTLDNVSPQETFECSLGVDPSIRVTRRPVVKTTETSGILSKSEVLRFTQTIDVKNTKTSSAKVVLIDQVPWSGDEKLKVTLIDPPQPTQVVAGDTPGERRIINRTKSM 409
BLAST of mRNA_M-pyrifera_M_contig7019.16776.1 vs. uniprot
Match: A0A2T7P404_POMCA (Uncharacterized protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7P404_POMCA) HSP 1 Score: 102 bits (254), Expect = 4.310e-22 Identity = 59/140 (42.14%), Postives = 80/140 (57.14%), Query Frame = 1 Query: 19 KLTVGEIQLSVEVTHYVVPSKEPAAYLQAKATNDTDYLLLASEDVSIFFGNSFAAKTSLESVSPGETFQAFLGIDPSVKIKVAPPRKTTRKRGIFSKSNQLTYTQSTSISNKKQKTVTCVVMDAMPRATDEVIKVVLQEP 438 K+TVG I + + + VP + P AY+ AK N + Y L E SIF N+F +K S++ V P E F+ LGIDP++K+ P +K GIFSK TY Q T + N V +VMD +PR+TDE +KV L EP Sbjct: 381 KVTVGLIDIKPTICYTCVPKRVPQAYMIAKVVNGSAYTFLRGE-TSIFLDNTFVSKGSMKDVFPQEEFECSLGIDPAIKVTYKPLKKYKTASGIFSKVTSTTYEQVTEVKNTHDYGVKLLVMDQLPRSTDERVKVNLLEP 519
BLAST of mRNA_M-pyrifera_M_contig7019.16776.1 vs. uniprot
Match: A0A183GCV8_HELPZ (DUF4139 domain-containing protein n=1 Tax=Heligmosomoides polygyrus TaxID=6339 RepID=A0A183GCV8_HELPZ) HSP 1 Score: 99.4 bits (246), Expect = 1.100e-21 Identity = 55/149 (36.91%), Postives = 86/149 (57.72%), Query Frame = 1 Query: 1 SNGETKKLTVGEIQLSVEVTHYVVPSKEPAAYLQAKATNDTDYLLLASEDVSIFFGNSFAAKTSLESVSPGETFQAFLGIDPSVKIKVAPPRKTTRKRGIFSKSNQLTYTQSTSISNKKQKTVTCVVMDAMPRATDEVIKVVLQEPAPS 447 S+G K+T+G LS ++ H VPSK +A+L A A N + L D +++ +SF AKT +++VSPGE F LG+D +VK++ P +K + GI +K++ Y Q + N + + + V + +PR+TDE IKV L P S Sbjct: 125 SDGAEHKVTIGIADLSPQLVHECVPSKNASAFLTASAVNSSSLPFLPG-DTAVYLNSSFVAKTQMKNVSPGERFSCSLGVDTAVKVEYKPVKKYHEQLGIINKTSSTVYEQIIIVKNSRAEPILLTVKEHIPRSTDEKIKVRLINPVAS 272 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7019.16776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7019.16776.1 >prot_M-pyrifera_M_contig7019.16776.1 ID=prot_M-pyrifera_M_contig7019.16776.1|Name=mRNA_M-pyrifera_M_contig7019.16776.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp SNGETKKLTVGEIQLSVEVTHYVVPSKEPAAYLQAKATNDTDYLLLASEDback to top mRNA from alignment at M-pyrifera_M_contig7019:4465..7255- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7019.16776.1 ID=mRNA_M-pyrifera_M_contig7019.16776.1|Name=mRNA_M-pyrifera_M_contig7019.16776.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2791bp|location=Sequence derived from alignment at M-pyrifera_M_contig7019:4465..7255- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7019:4465..7255- >mRNA_M-pyrifera_M_contig7019.16776.1 ID=mRNA_M-pyrifera_M_contig7019.16776.1|Name=mRNA_M-pyrifera_M_contig7019.16776.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig7019:4465..7255- (Macrocystis pyrifera P11B4 male)back to top |