mRNA_M-pyrifera_M_contig70156.16773.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig70156.16773.1 vs. uniprot
Match: A0A7S0K8Y3_CAFRO (Rhomboid-like protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K8Y3_CAFRO) HSP 1 Score: 237 bits (604), Expect = 3.380e-73 Identity = 114/263 (43.35%), Postives = 162/263 (61.60%), Query Frame = 1 Query: 4 PWVGWVVVCLCIFGFIWSIYLNGWAFEPLEYNPLVGPSVGALVAAGAKDTPKIMYDGEWWRLVTQLFLHGGLVHMAMNMFTLVRHGFPLERHAGTQRFAPIYIGAGILASLFSAVFLPDIISVGASGSVFGILGSIWGDFLANYSQLLQVDGGWKFCLCTLMALSITTLINLVLGLLPFVDNFAHVGGFIGGVLIGLAVMVRPRKSGISTATRATQCCALSTYFLLVLMGCISLLARWDVAG--WCPLCRAVSCLP-TPYWDC 783 P++G++++ C+FG ++S YLN W EPL N +VGP + AL+ AGAKDT I+ GEWWRL T ++LH G++H+ NM L+R G+P+E+ AG R P+Y GIL SL SAVFLP ++SVGASG+ F I+G+ W D L N+ L + W C LS +T +NL LGL+PFVDNFAHV G +GG+ +G M+RPR ++ C L + +++ +SL + V WCP C ++SC+ W C Sbjct: 105 PYLGYLIMAGCVFGMVYSFYLNNWEVEPLSVNFMVGPGLQALIEAGAKDTSLIVQGGEWWRLFTPMWLHAGIIHLVANMSVLLRFGWPMEKEAGWHRLGPVYFLGGILGSLASAVFLPSLLSVGASGACFAIIGAEWADLLQNWGLLWRHGHRWS-CTLQFCCLSFSTALNLALGLMPFVDNFAHVFGLLGGLFVGSIAMIRPRSHARGSSCMQLTCAWLGGFCYVIMALVLSLALVFGVKAHDWCPFCASISCVEIADLWSC 366
BLAST of mRNA_M-pyrifera_M_contig70156.16773.1 vs. uniprot
Match: A0A5A8C004_CAFRO (Rhomboid-like protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C004_CAFRO) HSP 1 Score: 237 bits (604), Expect = 5.200e-71 Identity = 114/263 (43.35%), Postives = 162/263 (61.60%), Query Frame = 1 Query: 4 PWVGWVVVCLCIFGFIWSIYLNGWAFEPLEYNPLVGPSVGALVAAGAKDTPKIMYDGEWWRLVTQLFLHGGLVHMAMNMFTLVRHGFPLERHAGTQRFAPIYIGAGILASLFSAVFLPDIISVGASGSVFGILGSIWGDFLANYSQLLQVDGGWKFCLCTLMALSITTLINLVLGLLPFVDNFAHVGGFIGGVLIGLAVMVRPRKSGISTATRATQCCALSTYFLLVLMGCISLLARWDVAG--WCPLCRAVSCLP-TPYWDC 783 P++G++++ C+FG ++S YLN W EPL N +VGP + AL+ AGAKDT I+ GEWWRL T ++LH G++H+ NM L+R G+P+E+ AG R P+Y GIL SL SAVFLP ++SVGASG+ F I+G+ W D L N+ L + W C LS +T +NL LGL+PFVDNFAHV G +GG+ +G M+RPR ++ C L + +++ +SL + V WCP C ++SC+ W C Sbjct: 303 PYLGYLIMAGCVFGMVYSFYLNNWEVEPLSVNFMVGPGLQALIEAGAKDTSLIVQGGEWWRLFTPMWLHAGIIHLVANMSVLLRFGWPMEKEAGWHRLGPVYFLGGILGSLASAVFLPSLLSVGASGACFAIIGAEWADLLQNWGLLWRHGHRWS-CTLQFCCLSFSTALNLALGLMPFVDNFAHVFGLLGGLFVGSIAMIRPRSHARGSSCMQLTCAWLGGFCYVIMALVLSLALVFGVKAHDWCPFCASISCVEIADLWSC 564
BLAST of mRNA_M-pyrifera_M_contig70156.16773.1 vs. uniprot
Match: A0A812Z2N3_9DINO (Rhomboid-like protease n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Z2N3_9DINO) HSP 1 Score: 237 bits (604), Expect = 1.500e-70 Identity = 114/263 (43.35%), Postives = 162/263 (61.60%), Query Frame = 1 Query: 4 PWVGWVVVCLCIFGFIWSIYLNGWAFEPLEYNPLVGPSVGALVAAGAKDTPKIMYDGEWWRLVTQLFLHGGLVHMAMNMFTLVRHGFPLERHAGTQRFAPIYIGAGILASLFSAVFLPDIISVGASGSVFGILGSIWGDFLANYSQLLQVDGGWKFCLCTLMALSITTLINLVLGLLPFVDNFAHVGGFIGGVLIGLAVMVRPRKSGISTATRATQCCALSTYFLLVLMGCISLLARWDVAG--WCPLCRAVSCLP-TPYWDC 783 P++G++++ C+FG ++S YLN W EPL N +VGP + AL+ AGAKDT I+ GEWWRL T ++LH G++H+ NM L+R G+P+E+ AG R P+Y GIL SL SAVFLP ++SVGASG+ F I+G+ W D L N+ L + W C LS +T +NL LGL+PFVDNFAHV G +GG+ +G M+RPR ++ C L + +++ +SL + V WCP C ++SC+ W C Sbjct: 105 PYLGYLIMAGCVFGMVYSFYLNNWEVEPLSVNFMVGPGLQALIEAGAKDTSLIVQGGEWWRLFTPMWLHAGIIHLVANMSVLLRFGWPMEKEAGWHRLGPVYFLGGILGSLASAVFLPSLLSVGASGACFAIIGAEWADLLQNWGLLWRHGHRWS-CTLQFCCLSFSTALNLALGLMPFVDNFAHVFGLLGGLFVGSIAMIRPRSHARGSSCMQLTCAWLGGFCYVIMALVLSLALVFGVKAHDWCPFCASISCVEIADLWSC 366
BLAST of mRNA_M-pyrifera_M_contig70156.16773.1 vs. uniprot
Match: A0A3P3Y9S4_PLABS (Rhomboid-like protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y9S4_PLABS) HSP 1 Score: 201 bits (511), Expect = 1.070e-57 Identity = 117/264 (44.32%), Postives = 157/264 (59.47%), Query Frame = 1 Query: 25 VCLCIFGFIWSIYLNGWAFEPLEYNPLVGPSVGALVAAGAKDTPKIMYDGEWWRLVTQLFLHGGLVHMAMNMFTLVRHGFPLERHAGTQRFAPIYIGAGILASLFSAVFLPDIISVGASGSVFGILGSIWGDFLANYSQLLQVDGGWKFCLCTLMALSITTLINLVLGLLPFVDNFAHVGGFIGGVLIGLAVMVRP------RKSGISTATRATQCCALSTYFLLVLMGCISLLARWDV-----AGWCPLCRAVSCLPTPYWDC 783 V LC++ S+YLNGW FE NPL+GPS L GAKDT +I GEWWRLVT + LH G++H+A+NM L R G LE+ G R A +Y+ AGI + SA+FLP ISVGASG++FG+LG+++GD NY +L++ W L++L + T + L GLLP VDNFAHVGGF+ G+L+G V+V P R +A L+ + ++L+ + WDV GWC RA+ CLPTPYW C Sbjct: 266 VALCVY----SMYLNGWQFESFSTNPLLGPSSSVLDGMGAKDTGRIR-AGEWWRLVTAMCLHSGVLHLAVNMSMLWRLGGSLEQGFGFGRVAIVYVLAGISGDILSALFLPMQISVGASGALFGLLGALYGDLAHNY-RLMEGSSFWY-----LVSLILNTALGLAAGLLPLVDNFAHVGGFVCGLLVGSCVLVDPHHARRSRSMPFYSAPLRIVSATLAVLWFIMLIWVFA----WDVNPNRICGWC---RALGCLPTPYWSC 511
BLAST of mRNA_M-pyrifera_M_contig70156.16773.1 vs. uniprot
Match: A0A024TBS4_9STRA (Rhomboid-like protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBS4_9STRA) HSP 1 Score: 185 bits (469), Expect = 3.910e-53 Identity = 95/252 (37.70%), Postives = 151/252 (59.92%), Query Frame = 1 Query: 46 FIWSIYLNGWAFEPLEYNPLVGPSVGALVAAGAKDTPKIMYDGEWWRLVTQLFLHGGLVHMAMNMFTLVRHGFPLERHAGTQRFAPIYIGAGILASLFSAVFLPDIISVGASGSVFGILGSIWGDFLANYSQLLQVDGGWKFCLCTLMALSITTLINLVLGLLPFVDNFAHVGGFIGGVLIGLAVMVRPR-KSGISTATRATQCCALSTY-----FLLVLMGCISLLARWDVAGWCPLCRAVSCLPTPYWDC 783 F+ I NGWAFE ++ NPL+GP+ L+ GA+ T +++DGEWWRL+T +FLH GL+H+ NM L + G LE +R IY +G++ ++ SAVF+PD++ VGASG++FG+ G+ + +F+ N++ LC + L + ++NL +GLLP+V+NFAH+ GFI G+ +G A++ P + TR+ + L + FL LM + L R D + C C+ + C+P P+W+C Sbjct: 70 FVVEIGENGWAFEDMKLNPLLGPTATVLLQMGAQRTD-LIFDGEWWRLLTAMFLHAGLLHLFFNMLGLYQLGVELENSFDRRRIVFIYFSSGVVGAICSAVFVPDVVGVGASGAIFGLFGATFAEFILNWALYANR-------LCHMTNLIVVAVVNLAIGLLPYVNNFAHLSGFITGLGMGFAILSLPTSREDRMLNTRSPRQRLLGKFGGVFTFLFALMFVVLLATRSDASKSCSWCKYLDCVPAPWWNC 313
BLAST of mRNA_M-pyrifera_M_contig70156.16773.1 vs. uniprot
Match: A0A7S4D9B5_HETAK (Rhomboid-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9B5_HETAK) HSP 1 Score: 179 bits (453), Expect = 3.270e-51 Identity = 107/267 (40.07%), Postives = 152/267 (56.93%), Query Frame = 1 Query: 13 GWVVVCLCIFGFIWSIYLNGWAFEPLEYNPLVGPSVGALVAAGAKDTPKIMYDGEWWRLVTQLFLHGGLVHMAMNMFTLVRHGFPLERHAGTQRFAPIYIGAGILASLFSAVFLPDIISVGASGSVFGILGSIWGDFLANYSQLLQVDGGWKFCLCTLMALSITTLINLVLGLLPFVDNFAHVGGFIGGVLIGLAVMV--------RPRKSGISTATRATQCCALSTYFLLVLMGCISLLARWDVAGWCPLCRAVSCLPTP--YWDC 783 G+ V+ + F + + GW F PL+ NP +GP LV GAKDT KI +GE WR+ T LH G VH+ NM L G +E G +RFA IYI +G++A+L SA+FLPD+ VG+SG++FG++G+ WGD + N+ LL+ W L A+S TL+N +GLLPF+DNFAH GG + G L GL ++ RPR A + AL+ +L+++G L + D+ CP C +SC P+ +WDC Sbjct: 7 GYAVIGVSCLAFFVEMQVAGWKFAPLKQNPTIGPGHDVLVKVGAKDTFKIADNGEAWRIFTPTVLHAGFVHLIFNMGFLYMVGQEMETTHGWKRFATIYILSGVVATLSSALFLPDLTMVGSSGAIFGLVGARWGDLIQNWDVLLRP---WA----ELAAMSAMTLLNYGMGLLPFIDNFAHTGGLVMGFLTGLVLLPQRRLGRSGRPRPMTRKQAALSHAGAALA--LVLLVLGLTGLYSGADLRLLCPGCLELSC-PSGLGWWDC 263
BLAST of mRNA_M-pyrifera_M_contig70156.16773.1 vs. uniprot
Match: A0A7S3PMX5_9STRA (Rhomboid-like protein n=4 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PMX5_9STRA) HSP 1 Score: 183 bits (464), Expect = 4.330e-51 Identity = 102/269 (37.92%), Postives = 153/269 (56.88%), Query Frame = 1 Query: 25 VCLCIFGFIWSIYLNGWAFEPLEYNPLVGPSVGALVAAGAKDTPKIMYDGEWWRLVTQLFLHGGLVHMAMNMFTLVRHGFPLERHAGTQRFAPIYIGAGILASLFSAVFLPDIISVGASGSVFGILGSIWGDFLANYSQLLQVDGGWKFCLCTLMALSITTLINLVLGLLPFVDNFAHVGGFIGGVLIGLAVMVRP--------RKSGISTATRATQCCALSTYFLLVLMGCISLLARWDVAGWCPLCRAVSCLPTP--------YWDC 783 +CLC F+ SI +NGWA EP++ NPL+GP V L+ GAK++ I DG+WWRL+ + LH G+VH+ NM LV G P+E+ GT R A + I +GI + SA+F P ++ VGASG++FG+ G+ W D N+ +L + G K L L+ I T+ N +GL+P++DN+AH+GGFI G+++GLA++++ ++ A R L LL +M + + D C +C SC P P +WDC Sbjct: 65 LCLCCIMFVVSIAMNGWAVEPVQINPLIGPGVETLLDLGAKESDLIQ-DGDWWRLLAPMVLHVGIVHLLANMLGLVVIGVPMEQEFGTLRIATVAISSGIFGVVMSALFAPHLVGVGASGAIFGLFGAAWADLAQNW-ELYR--GRNKLILFQLI---IYTVFNFAIGLMPYLDNWAHLGGFICGLVVGLAILIKSYGELGEFRKRYAYQIALRVMAAIVLP--ILLGVMTFLLFVGAADFVKTCKICSYFSCYPMPPGASGDDLWWDC 324
BLAST of mRNA_M-pyrifera_M_contig70156.16773.1 vs. uniprot
Match: A0A6H5JTL7_9PHAE (Rhomboid-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL7_9PHAE) HSP 1 Score: 185 bits (469), Expect = 2.650e-50 Identity = 100/264 (37.88%), Postives = 149/264 (56.44%), Query Frame = 1 Query: 31 LCIFGFIWSIYLNGWAFEPLEYNPLVGPSVGALVAAGAKDTPKIMYDGEWWRLVTQLFLHGGLVHMAMNMFTLVRHGFPLERHAGTQRFAPIYIGAGILASLFSAVFLPDIISVGASGSVFGILGSIWGDFLANYSQLLQVDGGWKFCLCTLMALSITTLINLVLGLLPFVDNFAHVGGFIGGVLIGLAVMVRPRKSGIS--------TATRATQCCALSTYFLLVLMGCISLLARWDVAGWCPLCRAVSCLP-----TPYWDC 783 +C+ W LNGW EPLE NP GPSV L+ AGAK I+ +G+WWRL++ +FLH G+VH NM ++ G +ER G R A IY+ AG+ ++ SA+F+P + VGASG++FG+ G++W D N+S + D F + L I T +N++LGL+P++DNFAH GG + G+ +GL ++V+ R+ A + Q A L+++G L R D A WC C +SC+ +P+W C Sbjct: 424 ICLILLFWEFGLNGWVAEPLEENPSYGPSVETLIDAGAKRGDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVACIYLVAGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWS--VNQDRCRMFTV-----LFILTAVNIILGLMPYLDNFAHCGGMLMGLFMGLGLLVQKREDDRGYRLDKKCYQARVSLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGDSPWWAC 680
BLAST of mRNA_M-pyrifera_M_contig70156.16773.1 vs. uniprot
Match: D8LIB7_ECTSI (Rhomboid-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB7_ECTSI) HSP 1 Score: 184 bits (466), Expect = 9.700e-50 Identity = 98/257 (38.13%), Postives = 147/257 (57.20%), Query Frame = 1 Query: 31 LCIFGFIWSIYLNGWAFEPLEYNPLVGPSVGALVAAGAKDTPKIMYDGEWWRLVTQLFLHGGLVHMAMNMFTLVRHGFPLERHAGTQRFAPIYIGAGILASLFSAVFLPDIISVGASGSVFGILGSIWGDFLANYSQLLQVDGGWKFCLCTLMALSITTLINLVLGLLPFVDNFAHVGGFIGGVLIGLAVMVRPRKSGISTATRATQCCALSTYFL-------LVLMGCISLLARWDVAGWCPLCRAVSCLPTPYWD 780 +C+ W LNGW E LE NP GPSV L+ AGAK T I+ +G+WWRL++ +FLH G+VH NM ++ G +ER G R A IY+ +G+ ++ SA+F+P + VGASG++FG+ G++W D N+S + D F + L I T +N++LGL+PF+DNFAH GG + G+ +GL ++V+ R+ +C +S + L+++G L R D A WC C +SC+ P D Sbjct: 426 ICLILLFWEFGLNGWEAESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVASIYLVSGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWS--VNQDRCRMFTV-----LFILTAVNIILGLMPFLDNFAHCGGMLMGLFMGLGLLVQKREDDRGDRLNK-KCYQISLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGD 674
BLAST of mRNA_M-pyrifera_M_contig70156.16773.1 vs. uniprot
Match: W4FVH6_9STRA (Rhomboid-like protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FVH6_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.270e-49 Identity = 96/260 (36.92%), Postives = 150/260 (57.69%), Query Frame = 1 Query: 22 VVCLCIFGFIWSIYLNGWAFEPLEYNPLVGPSVGALVAAGAKDTPKIMYDGEWWRLVTQLFLHGGLVHMAMNMFTLVRHGFPLERHAGTQRFAPIYIGAGILASLFSAVFLPDIISVGASGSVFGILGSIWGDFLANYSQLLQVDGGWKFCLCTLMALSITTLINLVLGLLPFVDNFAHVGGFIGGVLIGLAVMVRPRKSG---ISTATRATQCCAL---STYFLLVLMGCISLLARWDVAGWCPLCRAVSCLPTPYWDC 783 ++ L I F+ I NGW FE ++ NPLVGPS L+ GA+ + +++ GEWWRL T +FLHGGL+H+A NM L + G LE +R IY +G++ ++ SAVF+PD+I VGASG++FG+ G+ + +F+ N+ LC + L ++NL +GLLPFV+NFAH+ GF+ G+ +G A++ P ++T T + A + + L+ I L + CP C+ + C+P P+W+C Sbjct: 70 MIALNITIFVVEIGENGWKFEEVKVNPLVGPSGDLLLRMGAQRSD-LIFQGEWWRLFTAMFLHGGLLHLAFNMLALYQLGVELENTFDRRRVVCIYFASGLIGAMCSAVFVPDVIGVGASGAIFGLFGATFAEFVLNWDLYANR-------LCHMTNLIGVAIVNLGIGLLPFVNNFAHLSGFLSGLGMGFAMLSLPTSRQHRLLNTRTPKQRLLAKIGGTITIVFTLLFTILLATESNATKACPWCKYLDCVPAPWWNC 321 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70156.16773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig70156.16773.1 >prot_M-pyrifera_M_contig70156.16773.1 ID=prot_M-pyrifera_M_contig70156.16773.1|Name=mRNA_M-pyrifera_M_contig70156.16773.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=261bp WPWVGWVVVCLCIFGFIWSIYLNGWAFEPLEYNPLVGPSVGALVAAGAKDback to top mRNA from alignment at M-pyrifera_M_contig70156:23..805- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig70156.16773.1 ID=mRNA_M-pyrifera_M_contig70156.16773.1|Name=mRNA_M-pyrifera_M_contig70156.16773.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=783bp|location=Sequence derived from alignment at M-pyrifera_M_contig70156:23..805- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig70156:23..805- >mRNA_M-pyrifera_M_contig70156.16773.1 ID=mRNA_M-pyrifera_M_contig70156.16773.1|Name=mRNA_M-pyrifera_M_contig70156.16773.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1566bp|location=Sequence derived from alignment at M-pyrifera_M_contig70156:23..805- (Macrocystis pyrifera P11B4 male)back to top |