mRNA_M-pyrifera_M_contig70012.16756.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig70012.16756.1 vs. uniprot
Match: A9UXZ0_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UXZ0_MONBE) HSP 1 Score: 147 bits (372), Expect = 3.540e-39 Identity = 64/123 (52.03%), Postives = 86/123 (69.92%), Query Frame = 1 Query: 1 LGLPAYDYGLNALHGTQTLALTWPNGTSFAPTSFPMPVSLGMSWNSSVYRFVGSVIGVETRAMYLWGSEEFSAWSGQAHIGLDQWSPVLNLAHDPRWGRTQEVPSEDPLSLAAYTSAFSMGSQ 369 +GLP YD+G+NA+HG Q+ + +GT + PTSFP PV+ G +WN S Y +G +IGVETRA++L G+ E S WSG+ HIGLD WSP +N+A P WGR QEVP EDP + A+++G Q Sbjct: 75 IGLPEYDWGMNAIHGVQSSCIKDDDGTVYCPTSFPNPVNYGFTWNYSAYLELGRIIGVETRALWLAGAVEASTWSGRPHIGLDTWSPNINIARSPLWGRNQEVPGEDPFMNGQFGKAYTLGLQ 197
BLAST of mRNA_M-pyrifera_M_contig70012.16756.1 vs. uniprot
Match: A0A0S4INM3_BODSA (Glycoside hydrolase family 3, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4INM3_BODSA) HSP 1 Score: 132 bits (333), Expect = 1.690e-33 Identity = 64/123 (52.03%), Postives = 82/123 (66.67%), Query Frame = 1 Query: 1 LGLPAYDYGLNALHGTQTLALTWPNGTSFAPTSFPMPVSLGMSWNSSVYRFVGSVIGVETRAMYLWGSEEFSAWSGQAHIGLDQWSPVLNLAHDPRWGRTQEVPSEDPLSLAAYTSAFSMGSQ 369 LG+P YD+GLN +HG Q+ + N T PTSFP P LG +WN S +++G IG+E RA++ G+ E S WSG AHIGL+ WSP +N+ DPRWGR QEVPSEDPL Y A++ G Q Sbjct: 87 LGVPGYDWGLNCVHGVQSTCV---NDT--CPTSFPNPNGLGATWNMSNVQWMGMKIGLEARALWRAGAREPSLWSGMAHIGLNCWSPNININRDPRWGRNQEVPSEDPLLAGDYAKAYTEGIQ 204
BLAST of mRNA_M-pyrifera_M_contig70012.16756.1 vs. uniprot
Match: A0A7S4SLK6_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SLK6_9DINO) HSP 1 Score: 118 bits (295), Expect = 2.340e-28 Identity = 60/125 (48.00%), Postives = 76/125 (60.80%), Query Frame = 1 Query: 1 LGLPAYDYGLNALHGTQTLALTWPNGTSFAPTSFPMPVSLGMSWNSSVYRFVGSVIGVETRAMYLWGSEEFSAWSGQAHIGLDQWSPVLNLAHDPRWGRTQEVPSEDPLSLAAYTSAFSMGSQWG 375 LG+P YD+G N +HG Q+ T + PTSFP P LG S+N +V+R +G VIGVE R+++ G E SG GLD WSP +N+ DPRWGR E PSEDP L A+ A + G QWG Sbjct: 79 LGVPQYDWGGNCVHGVQSRCGTGTQNDTRCPTSFPNPNHLGASFNETVWRTMGRVIGVELRSLWRQGIGENHP-SGLPPFGLDCWSPNINVVRDPRWGRNMETPSEDPYLLGAFGVAVTEGLQWG 202
BLAST of mRNA_M-pyrifera_M_contig70012.16756.1 vs. uniprot
Match: A0A7R9TXZ1_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TXZ1_9VIRI) HSP 1 Score: 110 bits (274), Expect = 7.840e-28 Identity = 59/125 (47.20%), Postives = 77/125 (61.60%), Query Frame = 1 Query: 1 LGLPAYDYGLNALHGTQTLALTWPNGTSFAPTSFPMPVSLGMSWNSSVYRFVGSVIGVETRAMYLWGSEEFSAWSGQAHIGLDQWSPVLNLAHDPRWGRTQEVPSEDPLSLAAYTSAFSMGSQWG 375 LG+P YD+G N +HG Q+ P+G PTSFP P +LG S++ ++ + VIG E RA++ G E A SG IGLD WSP +N+A DPRWGR EVPSEDPL + + +S G Q G Sbjct: 32 LGVPQYDFGGNCIHGVQSRCA--PDGR--CPTSFPSPNALGASFDEGLWAAMAEVIGTELRALWRQGVGENRA-SGLPPIGLDCWSPNINIARDPRWGRVMEVPSEDPLVNGRFGAVYSRGLQEG 151
BLAST of mRNA_M-pyrifera_M_contig70012.16756.1 vs. uniprot
Match: A0A0G4FH08_VITBC (Fn3_like domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FH08_VITBC) HSP 1 Score: 111 bits (277), Expect = 6.230e-26 Identity = 54/123 (43.90%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 1 LGLPAYDYGLNALHGTQTLALTWPNGTSFAPTSFPMPVSLGMSWNSSVYRFVGSVIGVETRAMYLWGSEEFSAWSGQAHIGLDQWSPVLNLAHDPRWGRTQEVPSEDPLSLAAYTSAFSMGSQ 369 +GLP YD+G N +HG Q+ + + PTSFP P+ LG S++ +R +G++IG E RA+Y+ G E + S IGLD WSPV+N+ DPRWGR EVP EDP + + A++ G Q Sbjct: 84 IGLPRYDWGANCVHGVQSRCTS----DGYCPTSFPNPIGLGASFDEPSWRKMGNIIGRELRALYMAGVGENNPQS-IPKIGLDCWSPVINIGRDPRWGRNSEVPGEDPYLTSRFGVAYTQGMQ 201
BLAST of mRNA_M-pyrifera_M_contig70012.16756.1 vs. uniprot
Match: A0A813LHA7_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LHA7_POLGL) HSP 1 Score: 109 bits (272), Expect = 2.960e-25 Identity = 56/125 (44.80%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 1 LGLPAYDYGLNALHGTQTLALTWPNGTSFAPTSFPMPVSLGMSWNSSVYRFVGSVIGVETRAMYLWGSEEFSAWSGQAHIGLDQWSPVLNLAHDPRWGRTQEVPSEDPLSLAAYTSAFSMGSQWG 375 LG+P YD+G N +HG Q+ T NG + PTSFP P +LG ++N SV+ +G VIG E R+++ G E + IGLD WSP +N+ DPRWGR E SEDP L + A + G Q G Sbjct: 81 LGVPQYDWGGNCVHGVQSRCGTGSNGETRCPTSFPNPNALGATFNESVWHGMGRVIGRELRSLWKQGVGEEHPPTELPPIGLDCWSPNINIVRDPRWGRNLETASEDPFLLGLFGVAVTQGLQVG 205
BLAST of mRNA_M-pyrifera_M_contig70012.16756.1 vs. uniprot
Match: A0A813LQP5_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LQP5_POLGL) HSP 1 Score: 109 bits (272), Expect = 3.030e-25 Identity = 56/125 (44.80%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 1 LGLPAYDYGLNALHGTQTLALTWPNGTSFAPTSFPMPVSLGMSWNSSVYRFVGSVIGVETRAMYLWGSEEFSAWSGQAHIGLDQWSPVLNLAHDPRWGRTQEVPSEDPLSLAAYTSAFSMGSQWG 375 LG+P YD+G N +HG Q+ T NG + PTSFP P +LG ++N SV+ +G VIG E R+++ G E + IGLD WSP +N+ DPRWGR E SEDP L + A + G Q G Sbjct: 81 LGVPQYDWGGNCVHGVQSRCGTGSNGETRCPTSFPNPNALGATFNESVWHGMGRVIGRELRSLWKQGVGEEHPPTELPPIGLDCWSPNINIVRDPRWGRNLETASEDPFLLGLFGVAVTQGLQVG 205
BLAST of mRNA_M-pyrifera_M_contig70012.16756.1 vs. uniprot
Match: A0A813FNJ4_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FNJ4_POLGL) HSP 1 Score: 109 bits (272), Expect = 3.080e-25 Identity = 56/125 (44.80%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 1 LGLPAYDYGLNALHGTQTLALTWPNGTSFAPTSFPMPVSLGMSWNSSVYRFVGSVIGVETRAMYLWGSEEFSAWSGQAHIGLDQWSPVLNLAHDPRWGRTQEVPSEDPLSLAAYTSAFSMGSQWG 375 LG+P YD+G N +HG Q+ T NG + PTSFP P +LG ++N SV+ +G VIG E R+++ G E + IGLD WSP +N+ DPRWGR E SEDP L + A + G Q G Sbjct: 79 LGVPQYDWGGNCVHGVQSRCGTGSNGETRCPTSFPNPNALGATFNESVWHGMGRVIGRELRSLWKQGVGEEHPPTELPPIGLDCWSPNINIVRDPRWGRNLETASEDPFLLGLFGVAVTQGLQVG 203
BLAST of mRNA_M-pyrifera_M_contig70012.16756.1 vs. uniprot
Match: A0A813GV54_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GV54_POLGL) HSP 1 Score: 109 bits (272), Expect = 3.110e-25 Identity = 56/125 (44.80%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 1 LGLPAYDYGLNALHGTQTLALTWPNGTSFAPTSFPMPVSLGMSWNSSVYRFVGSVIGVETRAMYLWGSEEFSAWSGQAHIGLDQWSPVLNLAHDPRWGRTQEVPSEDPLSLAAYTSAFSMGSQWG 375 LG+P YD+G N +HG Q+ T NG + PTSFP P +LG ++N SV+ +G VIG E R+++ G E + IGLD WSP +N+ DPRWGR E SEDP L + A + G Q G Sbjct: 81 LGVPQYDWGGNCVHGVQSRCGTGSNGETRCPTSFPNPNALGATFNESVWHGMGRVIGRELRSLWKQGVGEEHPPTELPPIGLDCWSPNINIVRDPRWGRNLETASEDPFLLGLFGVAVTQGLQVG 205
BLAST of mRNA_M-pyrifera_M_contig70012.16756.1 vs. uniprot
Match: A0A329S3M5_9STRA (Beta-xylosidase/alpha-L-arabinofuranosidase 2 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S3M5_9STRA) HSP 1 Score: 108 bits (270), Expect = 5.490e-25 Identity = 56/125 (44.80%), Postives = 77/125 (61.60%), Query Frame = 1 Query: 1 LGLPAYDYGLNALHGTQTLALTWPNGTSFAPTSFPMPVSLGMSWNSSVYRFVGSVIGVETRAMYLWGSEEFSAWSGQAHIGLDQWSPVLNLAHDPRWGRTQEVPSEDPLSLAAYTSAFSMGSQWG 375 +GLP Y++G N +HG Q+ GT+ PTSFP P++LG ++ V + VIG E RA++L G+ E + G H+GLD WSP +N+ DPRWGR E PSEDPL + Y A++ G Q G Sbjct: 76 IGLPEYNWGANCVHGVQSTC-----GTN-CPTSFPNPINLGAIFDPQVVSDMAQVIGWELRALWLEGARE--NYKGGPHLGLDCWSPNININRDPRWGRNTETPSEDPLVNSKYGVAYTRGLQEG 192 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70012.16756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig70012.16756.1 >prot_M-pyrifera_M_contig70012.16756.1 ID=prot_M-pyrifera_M_contig70012.16756.1|Name=mRNA_M-pyrifera_M_contig70012.16756.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp LGLPAYDYGLNALHGTQTLALTWPNGTSFAPTSFPMPVSLGMSWNSSVYRback to top mRNA from alignment at M-pyrifera_M_contig70012:801..1175+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig70012.16756.1 ID=mRNA_M-pyrifera_M_contig70012.16756.1|Name=mRNA_M-pyrifera_M_contig70012.16756.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=375bp|location=Sequence derived from alignment at M-pyrifera_M_contig70012:801..1175+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig70012:801..1175+ >mRNA_M-pyrifera_M_contig70012.16756.1 ID=mRNA_M-pyrifera_M_contig70012.16756.1|Name=mRNA_M-pyrifera_M_contig70012.16756.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig70012:801..1175+ (Macrocystis pyrifera P11B4 male)back to top |