mRNA_M-pyrifera_M_contig70011.16755.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig70011.16755.1
Unique NamemRNA_M-pyrifera_M_contig70011.16755.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: A0A6G0XDT4_9STRA (S4 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDT4_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.930e-47
Identity = 98/231 (42.42%), Postives = 141/231 (61.04%), Query Frame = 1
Query:   22 MRISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGSMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSSRGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHLKQAGPRGAVTE 714
            MR+++ +A     SRR+A   I EG+V+V+GV V      V     I V    +P +         R+++AHKLPGE+V+ +DP+GR T+ DR++ MG+ + L +VGRLD  +EGLLLLT+DG   R LEHP   +QR YR  V+G +    ID   RG+  D  + RP+ V ++S++ K  WL++ L EG+NRE+R+AM H+ L   RLIR  YGPY L     +G+V E
Sbjct:   54 MRLAKRLAMAGVSSRREAEKIIAEGRVQVNGVTVDRVAHNVTMQDIIAVDEKLLPAKPI-----KRRVWIAHKLPGELVTTNDPQGRPTIMDRIKRMGIDAHLMAVGRLDFNTEGLLLLTNDGDYARLLEHPKQAVQRTYRVLVRGQVLQSKIDELARGATVDGVKYRPIHVKIESTKDKDSWLQVKLTEGKNREVRKAMTHVRLIVKRLIRVAYGPYRLADLS-KGSVLE 278          
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: A0A1V9ZK83_9STRA (RNA pseudouridine synthase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZK83_9STRA)

HSP 1 Score: 164 bits (415), Expect = 2.930e-46
Identity = 95/233 (40.77%), Postives = 145/233 (62.23%), Query Frame = 1
Query:   22 MRISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGSMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSSRGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHLKQAGPRGAVTEAK 720
            MR+++ +A     SRR+A   I++G+V V+G  V +    V     + V    +  +         R+++AHKLPGE+V+ +DP+GR T+ DRL+ MG+ + + +VGRLD  +EGLLLLT+DGA  R LEHP   +QR YRA V+G + P  I   ++G+  D  + RP+ V ++S++ K  WL++ L EG+NRE+R+A+ H+ L   RLIR +YGPY L    P+G V E +
Sbjct:   50 MRLAKRLALSGVSSRREAEKIIQDGRVTVNGFVVNNVAHNVTLKDLVTVDEQPLMFKD------ERRVWIAHKLPGELVTTNDPQGRPTIMDRLKKMGMRNHVMAVGRLDFNTEGLLLLTNDGAYARELEHPKFEVQRTYRALVRGQVLPSKIAELQKGAVVDGVKYRPIEVKIESTKDKDSWLQVKLSEGKNREVRKALAHVRLIVKRLIRIEYGPYRLADL-PKGYVLEVQ 275          
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: A0A5D6Y6X5_9STRA (S4 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6X5_9STRA)

HSP 1 Score: 165 bits (417), Expect = 2.930e-46
Identity = 99/233 (42.49%), Postives = 145/233 (62.23%), Query Frame = 1
Query:   25 RISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEG-STIQVGSMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSSRGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHLKQAGPRGAVTEAK 720
            R+++ +A     SRR+A   IE  +V V+G  V D   +V+     + VG   +      ++++  +++LAHK+PGE+V+ +DP+GR T+FDRL+ MG+   +  VGRLD  +EGLLLLT+DG   R LEHP + + RVYRA+V+G +    I    RG   D  + R + V VQS+  K  WL++ L EG+NRE+R+A+ H+ L   RLIR QYGPY L    P+GAV EA+
Sbjct:   64 RLAKRIAMGGVCSRREAEKRIESREVTVNGRVVTDVATVVDLARDVVAVGGRPL------AAVAQLKVWLAHKIPGELVTTNDPQGRPTIFDRLKVMGLTQHMMPVGRLDFNTEGLLLLTNDGDYARELEHPKSDVSRVYRAQVRGIVSESKIQELRRGPLVDGVKYRSIEVSVQSTDKKDSWLQVKLAEGKNREVRKALAHVRLVVKRLIRVQYGPYRLADL-PKGAVLEAR 289          
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: A0A5A8DNI3_CAFRO (PseudoU_synth_2 domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DNI3_CAFRO)

HSP 1 Score: 167 bits (422), Expect = 3.140e-46
Identity = 105/246 (42.68%), Postives = 142/246 (57.72%), Query Frame = 1
Query:   85 IEEGKVRVDGVEVKDPGLLVE-EGSTIQVGSMEI--PVQSFASSISSA--RLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQS---------SRGKTH--------------------WLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHLKQAGPRGAVTEAK 720
            I +G+V +   +V  P L V+ + + ++VG   +    +  A +++S   RL L HKLPGE+V+  DPEGR TLF RL AM + SGL +VGRLD+ SEGLLLLTDDG   R+LEHP +RI+RVYR RV G++  W +    RG    +E  RPM VVV+          +RG+ +                    WLR+ L EGRNREIRRA+  + LR  RL+RT +GPY L     RG+  E +
Sbjct:    2 IAKGEVFIGDRQVLSPALKVDPDTAVVKVGKHTVRGDGEGHAGAVASKLPRLVLVHKLPGELVTRSDPEGRPTLFGRLSAMSLGSGLKAVGRLDMQSEGLLLLTDDGGFSRFLEHPASRIKRVYRVRVFGEVSEWKLRQLRRGVTVGKETFRPMGVVVEGGQSRGAAAGARGRGNGGTARNGKSSGGLLAPRGNVWLRVTLSEGRNREIRRALASVQLRVGRLVRTGFGPYKLDGIH-RGSAVEVR 246          
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: W4FXM7_9STRA (S4 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FXM7_9STRA)

HSP 1 Score: 164 bits (414), Expect = 7.810e-46
Identity = 98/221 (44.34%), Postives = 139/221 (62.90%), Query Frame = 1
Query:   22 MRISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGSMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSS-RGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHL 681
            MR+++ +A     SRR+A   I EG+V V+G +V    + V     + V       ++ A+  S  R+++AHKL GE+V+  DP GR T+  R++AMGV S L +VGRLD  +EGLL+LT+DG   RYLEHP + +QRVYR  V G + P  +D   RG+  D  + RPM+V ++S+ + K  WL++ L EG+NREIR AM H+ L   RLIR +YGPY L
Sbjct:   72 MRLAKRLAMAGVSSRREAEKIILEGRVVVNGAKVNQVAVNVTFDDVVTVDH-----KTLAARPSKRRVWIAHKLAGELVTSSDPRGRPTILQRIKAMGVESHLMAVGRLDFNTEGLLVLTNDGDYARYLEHPKHAVQRVYRVLVWGQVLPSKLDELRRGALVDGVKYRPMAVKIESTTKDKETWLQVKLTEGKNREIRNAMAHVRLVLKRLIRVEYGPYRL 287          
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: A0A0P1B5W5_PLAHL (Pseudouridine synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5W5_PLAHL)

HSP 1 Score: 162 bits (410), Expect = 1.150e-45
Identity = 96/240 (40.00%), Postives = 145/240 (60.42%), Query Frame = 1
Query:    1 STVDRKQMRISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGSMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSSRGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHLKQAGPRGAVTEAK 720
            ST  +  +R+++ +A     SRR+A + I+  KV+V+GV      ++    + + V +  + V++   +  + ++++AHKL GE+++  DP+GR T+FDRLQ MG    +  VGRLD  +EGLLLLT+DG   R LEHP N + RVYRA V+G +    I   +RG      + RP+ V VQS   K  WL +++ EG+NRE+R+A+ H+ L   +LIR QYGPY L    P GAV E +
Sbjct:   27 STNSKTMIRLAKRIAMSGLCSRREAELQIQASKVKVNGV------VITNVTTNVNVENDVVMVKNQVLTTKNRQVWIAHKLKGELITTKDPKGRTTIFDRLQKMGFHQHIMPVGRLDFNTEGLLLLTNDGDYARELEHPSNGVTRVYRALVRGHVLDSKILELKRGPVIHGMKYRPIHVTVQSRNAKDSWLHVLVTEGKNREVRKALAHVRLVVKQLIRIQYGPYRLADLPP-GAVLEVR 259          
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: A0A024TUI3_9STRA (S4 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUI3_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.160e-44
Identity = 96/221 (43.44%), Postives = 137/221 (61.99%), Query Frame = 1
Query:   22 MRISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGSMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSS-RGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHL 681
            MR+++ +A     SRR+A   I +G+V V+G  V      V     + V +  +P +      S  R+++AHKLPGE+V+  DP GR T+  RL+AMG  + + +VGRLD  +EGLLLLT+DG   R+LEHP + +QRVYR  V G + P  +D   RG+  D  + RPM V ++S+ + K  WL++ L EG+NREIR+AM H+ L   RLIR +YGPY L
Sbjct:   70 MRLAKRMAMAGISSRREAEKIILDGRVVVNGSRVTQVAHNVTFDDVVTVDNKTLPARP-----SKRRVWIAHKLPGELVTSSDPRGRPTIMQRLKAMGFDTHVMAVGRLDYNTEGLLLLTNDGDYARFLEHPKHSVQRVYRVLVWGQVLPSKLDELRRGALVDGVKYRPMEVKIESTTKDKETWLQVKLTEGKNREIRKAMAHVRLVLKRLIRVEYGPYRL 285          
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: A0A512HBK2_9PROT (Pseudouridine synthase n=1 Tax=Pararhodospirillum oryzae TaxID=478448 RepID=A0A512HBK2_9PROT)

HSP 1 Score: 159 bits (401), Expect = 3.270e-44
Identity = 105/230 (45.65%), Postives = 133/230 (57.83%), Query Frame = 1
Query:   25 RISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGSMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSSRGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHLKQAGPRGAVTE 714
            RI++V+AR    SRR+A   I EG+V ++G  V  P  LV    T+QV    +P +         RL+  HK  G V + HDP+GR TLF+RL A  +P  +  VGRLDL SEGLLLLT+DGA+ R LE P     R YR RV G  +P  + A E G   D E+   +  V++  +    WL + L EGRNREIRR M+HLGL   RLIR  YGP+ L Q  P GAV E
Sbjct:   31 RIAKVIARAGVCSRREAESLIAEGRVVLNGRPVSTPATLVGASDTVQVDGKPLPARQ------PTRLWRYHKPAGIVTTNHDPQGRPTLFERLPA-DMPRVVK-VGRLDLDSEGLLLLTNDGALARQLELPTQGWLRRYRVRVYGTPDPVRLAALEEGITIDGERFGSIRAVLERQQASNAWLAVSLREGRNREIRRVMEHLGLPVSRLIRVAYGPFQLGQLAP-GAVEE 251          
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: A0A1V9YPY2_9STRA (RNA pseudouridine synthase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPY2_9STRA)

HSP 1 Score: 158 bits (400), Expect = 5.270e-44
Identity = 90/220 (40.91%), Postives = 138/220 (62.73%), Query Frame = 1
Query:   22 MRISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGSMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSSRGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHL 681
            +R+++ +A     SRR+A   I +G+V V+GV V++    V     + V    +  +         R+++AHKLPGE+V+ +DP+GR  + DRL+ MG+   + +VGRLD  +EGLLLLT+DGA  R LEHP   +QR YRA V+G + P  I   ++G+  D  + RP+ V V+S++ K  WL++ L EG+NRE+R+A+ H+ L   RL+R +YGPY L
Sbjct:   50 LRLAKRLALSGVGSRREAEKIILDGRVAVNGVLVENVAHNVNMTDQVTVDDKPLTFKD------KRRVWIAHKLPGELVTRNDPQGRPIIMDRLKKMGMTQHIIAVGRLDFNTEGLLLLTNDGAYARELEHPQFAVQRTYRALVRGQVLPSKIAELQKGAVVDGVKYRPIQVSVESTKDKDSWLQVKLSEGKNREVRKALAHVRLIVKRLVRVEYGPYRL 263          
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: H3GHV3_PHYRM (S4 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHV3_PHYRM)

HSP 1 Score: 159 bits (402), Expect = 8.140e-44
Identity = 93/234 (39.74%), Postives = 140/234 (59.83%), Query Frame = 1
Query:   22 MRISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGSMEIPVQS-FASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSSRGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHLKQAGPRGAVTEAK 720
            +R+++ +A     SRR+A   I+   V V+G  V D        +T+ V   E+ V     +     ++++AHKL GE+V+  DP+GR T+FDR++ MG+   +  VGRLD  +EGL+L T+DG   R LEHP   + RVYRA V+G++ P  +   +RG   D  + RP++V +QS+  K  WL++ + EG+NRE+R+A+ H+ L   RLIR QYGPY L    P GAV E +
Sbjct:   82 VRLAKRIAMSGLCSRREAEKRIQSCDVTVNGRVVADVA------TTVDVLKDEVAVDGRVLTKTQKTKIWMAHKLKGELVTSSDPQGRATIFDRMRVMGLAQHMMPVGRLDFNTEGLMLFTNDGDYARTLEHPKTEVTRVYRALVRGNVAPSKLQELQRGPLVDGVKYRPITVTIQSTDKKDSWLQVKVAEGKNREVRKALAHVRLVVKRLIRVQYGPYRLADL-PSGAVLEVR 308          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0XDT4_9STRA2.930e-4742.42S4 domain-containing protein n=1 Tax=Aphanomyces e... [more]
A0A1V9ZK83_9STRA2.930e-4640.77RNA pseudouridine synthase n=1 Tax=Thraustotheca c... [more]
A0A5D6Y6X5_9STRA2.930e-4642.49S4 domain-containing protein n=1 Tax=Pythium brass... [more]
A0A5A8DNI3_CAFRO3.140e-4642.68PseudoU_synth_2 domain-containing protein n=3 Tax=... [more]
W4FXM7_9STRA7.810e-4644.34S4 domain-containing protein n=1 Tax=Aphanomyces a... [more]
A0A0P1B5W5_PLAHL1.150e-4540.00Pseudouridine synthase n=1 Tax=Plasmopara halstedi... [more]
A0A024TUI3_9STRA1.160e-4443.44S4 domain-containing protein n=2 Tax=Aphanomyces i... [more]
A0A512HBK2_9PROT3.270e-4445.65Pseudouridine synthase n=1 Tax=Pararhodospirillum ... [more]
A0A1V9YPY2_9STRA5.270e-4440.91RNA pseudouridine synthase n=1 Tax=Achlya hypogyna... [more]
H3GHV3_PHYRM8.140e-4439.74S4 domain-containing protein n=1 Tax=Phytophthora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70011contigM-pyrifera_M_contig70011:49..861 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score174.9
Seed ortholog evalue4.5e-41
Seed eggNOG ortholog36331.EPrPI00000019525
Hectar predicted targeting categoryother localisation
EggNOG free text desc.RNA pseudouridine synthase. Source PGD
EggNOG OGs1MBFY@121069,2QT4T@2759,COG1187@1
Ec32 ortholog descriptionRNA pseudouridylate synthase domain-containing protein (C-terminal) RNA pseudouridylate synthase dom
Ec32 orthologEc-15_000880.1
COG Functional cat.J
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Exons2
Model size720
Cds size699
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70011.16755.1prot_M-pyrifera_M_contig70011.16755.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig70011 49..840 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816593.5477524-CDS-M-pyrifera_M_contig70011:48..2831622816593.5477524-CDS-M-pyrifera_M_contig70011:48..283Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70011 49..283 -
1692278066.5277677-CDS-M-pyrifera_M_contig70011:48..2831692278066.5277677-CDS-M-pyrifera_M_contig70011:48..283Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70011 49..283 -
1622816593.560735-CDS-M-pyrifera_M_contig70011:376..8401622816593.560735-CDS-M-pyrifera_M_contig70011:376..840Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70011 377..840 -
1692278066.5398552-CDS-M-pyrifera_M_contig70011:376..8401692278066.5398552-CDS-M-pyrifera_M_contig70011:376..840Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig70011 377..840 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816593.572345-UTR-M-pyrifera_M_contig70011:840..8611622816593.572345-UTR-M-pyrifera_M_contig70011:840..861Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig70011 841..861 -
1692278066.5500448-UTR-M-pyrifera_M_contig70011:840..8611692278066.5500448-UTR-M-pyrifera_M_contig70011:840..861Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig70011 841..861 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig70011.16755.1

>prot_M-pyrifera_M_contig70011.16755.1 ID=prot_M-pyrifera_M_contig70011.16755.1|Name=mRNA_M-pyrifera_M_contig70011.16755.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=233bp
MRISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVG
SMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVP
SGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEP
WMIDARERGSDSDEEQLRPMSVVVQSSRGKTHWLRIVLDEGRNREIRRAM
DHLGLRCDRLIRTQYGPYHLKQAGPRGAVTEAK
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mRNA from alignment at M-pyrifera_M_contig70011:49..861-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig70011.16755.1 ID=mRNA_M-pyrifera_M_contig70011.16755.1|Name=mRNA_M-pyrifera_M_contig70011.16755.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=813bp|location=Sequence derived from alignment at M-pyrifera_M_contig70011:49..861- (Macrocystis pyrifera P11B4 male)
AGCACGGTGGATAGGAAACAGATGCGTATTTCGAGAGTGGTAGCAAGGGA GACTGAATGGAGTCGACGGCAAGCGATTGTTGCCATTGAAGAAGGAAAAG TTCGAGTTGATGGTGTTGAAGTGAAGGACCCGGGGCTATTGGTAGAAGAA GGTAGCACAATTCAGGTTGGTTCGATGGAAATTCCAGTTCAAAGCTTTGC ATCGTCAATTTCTTCAGCACGACTCTTTCTTGCACACAAGTTACCAGGCG AAGTTGTGAGTTGGCATGATCCAGAAGGACGGGTGACATTGTTTGATCGA TTACAAGCTATGGGAGTTCCTAGTGGGTTGAATTCTGTGGGTCGCCTTGA TTTGTTGAGTGAGGGATTGTTGTTACTCACAGACGATGGAGCAGTAAAAC GGTATCTGGAACACCCTGGGAATCGCATCCAAAGAGTATATAGAGCTCGA GTTCAAGGAGATATTGAACCTTGGATGATTGATGCGTTGCGAAGAGGGCT TCTTCTCCCAAGAAAAAGTGGAGGTAGAAGAAGAGAGTGGTGGAAGTCGA GACAAGGGAGTGGAAGGAGTGGGAGAAGAAGAGAAAGAGGGAGCGATAGT GATGAGGAGCAATTGAGACCCATGAGCGTAGTTGTGCAATCGTCAAGAGG AAAGACTCATTGGCTAAGGATTGTGTTGGATGAAGGGAGGAATCGAGAAA TCAGAAGGGCTATGGATCATCTTGGATTGCGTTGTGATAGGCTCATTAGA ACTCAATATGGTCCTTACCATCTCAAACAAGCAGGTCCAAGAGGAGCTGT GACTGAAGCGAAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig70011:49..861-

>mRNA_M-pyrifera_M_contig70011.16755.1 ID=mRNA_M-pyrifera_M_contig70011.16755.1|Name=mRNA_M-pyrifera_M_contig70011.16755.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1398bp|location=Sequence derived from alignment at M-pyrifera_M_contig70011:49..861- (Macrocystis pyrifera P11B4 male)
ATGCGTATTTCGAGAGTGGTAGCAAGGGAGACTGAATGGAGTCGACGGCA
AGCGATTGTTGCCATTGAAGAAGGAAAAGTTCGAGTTGATGGTGTTGAAG
TGAAGGACCCGGGGCTATTGGTAGAAGAAGGTAGCACAATTCAGGTTGGT
TCGATGGAAATTCCAGTTCAAAGCTTTGCATCGTCAATTTCTTCAGCACG
ACTCTTTCTTGCACACAAGTTACCAGGCGAAGTTGTGAGTTGGCATGATC
CAGAAGGACGGGTGACATTGTTTGATCGATTACAAGCTATGGGAGTTCCT
AGTGGGTTGAATTCTGTGGGTCGCCTTGATTTGTTGAGTGAGGGATTGTT
GTTACTCACAGACGATGGAGCAGTAAAACGGTATCTGGAACACCCTGGGA
ATCGCATCCAAAGAGTATATAGAGCTCGAGTTCAAGGAGATATTGAACCT
TGGATGATTGATGCATGCGTATTTCGAGAGTGGTAGCAAGGGAGACTGAA
TGGAGTCGACGGCAAGCGATTGTTGCCATTGAAGAAGGAAAAGTTCGAGT
TGATGGTGTTGAAGTGAAGGACCCGGGGCTATTGGTAGAAGAAGGTAGCA
CAATTCAGGTTGGTTCGATGGAAATTCCAGTTCAAAGCTTTGCATCGTCA
ATTTCTTCAGCACGACTCTTTCTTGCACACAAGTTACCAGGCGAAGTTGT
GAGTTGGCATGATCCAGAAGGACGGGTGACATTGTTTGATCGATTACAAG
CTATGGGAGTTCCTAGTGGGTTGAATTCTGTGGGTCGCCTTGATTTGTTG
AGTGAGGGATTGTTGTTACTCACAGACGATGGAGCAGTAAAACGGTATCT
GGAACACCCTGGGAATCGCATCCAAAGAGTATATAGAGCTCGAGTTCAAG
GAGATATTGAACCTTGGATGATTGATGCAAGAGAAAGAGGGAGCGATAGT
GATGAGGAGCAATTGAGACCCATGAGCGTAGTTGTGCAATCGTCAAGAGG
AAAGACTCATTGGCTAAGGATTGTGTTGGATGAAGGGAGGAATCGAGAAA
TCAGAAGGGCTATGGATCATCTTGGATTGCGTTGTGATAGGCTCATTAGA
ACTCAATATGGTCCTTACCATCTCAAACAAGCAGGTCCAAGAGGAGCTGT
GACTGAAGCGAAAAAGAGAAAGAGGGAGCGATAGTGATGAGGAGCAATTG
AGACCCATGAGCGTAGTTGTGCAATCGTCAAGAGGAAAGACTCATTGGCT
AAGGATTGTGTTGGATGAAGGGAGGAATCGAGAAATCAGAAGGGCTATGG
ATCATCTTGGATTGCGTTGTGATAGGCTCATTAGAACTCAATATGGTCCT
TACCATCTCAAACAAGCAGGTCCAAGAGGAGCTGTGACTGAAGCGAAA
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