mRNA_M-pyrifera_M_contig70011.16755.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: A0A6G0XDT4_9STRA (S4 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDT4_9STRA) HSP 1 Score: 167 bits (422), Expect = 2.930e-47 Identity = 98/231 (42.42%), Postives = 141/231 (61.04%), Query Frame = 1 Query: 22 MRISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGSMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSSRGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHLKQAGPRGAVTE 714 MR+++ +A SRR+A I EG+V+V+GV V V I V +P + R+++AHKLPGE+V+ +DP+GR T+ DR++ MG+ + L +VGRLD +EGLLLLT+DG R LEHP +QR YR V+G + ID RG+ D + RP+ V ++S++ K WL++ L EG+NRE+R+AM H+ L RLIR YGPY L +G+V E Sbjct: 54 MRLAKRLAMAGVSSRREAEKIIAEGRVQVNGVTVDRVAHNVTMQDIIAVDEKLLPAKPI-----KRRVWIAHKLPGELVTTNDPQGRPTIMDRIKRMGIDAHLMAVGRLDFNTEGLLLLTNDGDYARLLEHPKQAVQRTYRVLVRGQVLQSKIDELARGATVDGVKYRPIHVKIESTKDKDSWLQVKLTEGKNREVRKAMTHVRLIVKRLIRVAYGPYRLADLS-KGSVLE 278
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: A0A1V9ZK83_9STRA (RNA pseudouridine synthase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZK83_9STRA) HSP 1 Score: 164 bits (415), Expect = 2.930e-46 Identity = 95/233 (40.77%), Postives = 145/233 (62.23%), Query Frame = 1 Query: 22 MRISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGSMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSSRGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHLKQAGPRGAVTEAK 720 MR+++ +A SRR+A I++G+V V+G V + V + V + + R+++AHKLPGE+V+ +DP+GR T+ DRL+ MG+ + + +VGRLD +EGLLLLT+DGA R LEHP +QR YRA V+G + P I ++G+ D + RP+ V ++S++ K WL++ L EG+NRE+R+A+ H+ L RLIR +YGPY L P+G V E + Sbjct: 50 MRLAKRLALSGVSSRREAEKIIQDGRVTVNGFVVNNVAHNVTLKDLVTVDEQPLMFKD------ERRVWIAHKLPGELVTTNDPQGRPTIMDRLKKMGMRNHVMAVGRLDFNTEGLLLLTNDGAYARELEHPKFEVQRTYRALVRGQVLPSKIAELQKGAVVDGVKYRPIEVKIESTKDKDSWLQVKLSEGKNREVRKALAHVRLIVKRLIRIEYGPYRLADL-PKGYVLEVQ 275
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: A0A5D6Y6X5_9STRA (S4 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6X5_9STRA) HSP 1 Score: 165 bits (417), Expect = 2.930e-46 Identity = 99/233 (42.49%), Postives = 145/233 (62.23%), Query Frame = 1 Query: 25 RISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEG-STIQVGSMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSSRGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHLKQAGPRGAVTEAK 720 R+++ +A SRR+A IE +V V+G V D +V+ + VG + ++++ +++LAHK+PGE+V+ +DP+GR T+FDRL+ MG+ + VGRLD +EGLLLLT+DG R LEHP + + RVYRA+V+G + I RG D + R + V VQS+ K WL++ L EG+NRE+R+A+ H+ L RLIR QYGPY L P+GAV EA+ Sbjct: 64 RLAKRIAMGGVCSRREAEKRIESREVTVNGRVVTDVATVVDLARDVVAVGGRPL------AAVAQLKVWLAHKIPGELVTTNDPQGRPTIFDRLKVMGLTQHMMPVGRLDFNTEGLLLLTNDGDYARELEHPKSDVSRVYRAQVRGIVSESKIQELRRGPLVDGVKYRSIEVSVQSTDKKDSWLQVKLAEGKNREVRKALAHVRLVVKRLIRVQYGPYRLADL-PKGAVLEAR 289
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: A0A5A8DNI3_CAFRO (PseudoU_synth_2 domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DNI3_CAFRO) HSP 1 Score: 167 bits (422), Expect = 3.140e-46 Identity = 105/246 (42.68%), Postives = 142/246 (57.72%), Query Frame = 1 Query: 85 IEEGKVRVDGVEVKDPGLLVE-EGSTIQVGSMEI--PVQSFASSISSA--RLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQS---------SRGKTH--------------------WLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHLKQAGPRGAVTEAK 720 I +G+V + +V P L V+ + + ++VG + + A +++S RL L HKLPGE+V+ DPEGR TLF RL AM + SGL +VGRLD+ SEGLLLLTDDG R+LEHP +RI+RVYR RV G++ W + RG +E RPM VVV+ +RG+ + WLR+ L EGRNREIRRA+ + LR RL+RT +GPY L RG+ E + Sbjct: 2 IAKGEVFIGDRQVLSPALKVDPDTAVVKVGKHTVRGDGEGHAGAVASKLPRLVLVHKLPGELVTRSDPEGRPTLFGRLSAMSLGSGLKAVGRLDMQSEGLLLLTDDGGFSRFLEHPASRIKRVYRVRVFGEVSEWKLRQLRRGVTVGKETFRPMGVVVEGGQSRGAAAGARGRGNGGTARNGKSSGGLLAPRGNVWLRVTLSEGRNREIRRALASVQLRVGRLVRTGFGPYKLDGIH-RGSAVEVR 246
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: W4FXM7_9STRA (S4 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FXM7_9STRA) HSP 1 Score: 164 bits (414), Expect = 7.810e-46 Identity = 98/221 (44.34%), Postives = 139/221 (62.90%), Query Frame = 1 Query: 22 MRISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGSMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSS-RGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHL 681 MR+++ +A SRR+A I EG+V V+G +V + V + V ++ A+ S R+++AHKL GE+V+ DP GR T+ R++AMGV S L +VGRLD +EGLL+LT+DG RYLEHP + +QRVYR V G + P +D RG+ D + RPM+V ++S+ + K WL++ L EG+NREIR AM H+ L RLIR +YGPY L Sbjct: 72 MRLAKRLAMAGVSSRREAEKIILEGRVVVNGAKVNQVAVNVTFDDVVTVDH-----KTLAARPSKRRVWIAHKLAGELVTSSDPRGRPTILQRIKAMGVESHLMAVGRLDFNTEGLLVLTNDGDYARYLEHPKHAVQRVYRVLVWGQVLPSKLDELRRGALVDGVKYRPMAVKIESTTKDKETWLQVKLTEGKNREIRNAMAHVRLVLKRLIRVEYGPYRL 287
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: A0A0P1B5W5_PLAHL (Pseudouridine synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5W5_PLAHL) HSP 1 Score: 162 bits (410), Expect = 1.150e-45 Identity = 96/240 (40.00%), Postives = 145/240 (60.42%), Query Frame = 1 Query: 1 STVDRKQMRISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGSMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSSRGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHLKQAGPRGAVTEAK 720 ST + +R+++ +A SRR+A + I+ KV+V+GV ++ + + V + + V++ + + ++++AHKL GE+++ DP+GR T+FDRLQ MG + VGRLD +EGLLLLT+DG R LEHP N + RVYRA V+G + I +RG + RP+ V VQS K WL +++ EG+NRE+R+A+ H+ L +LIR QYGPY L P GAV E + Sbjct: 27 STNSKTMIRLAKRIAMSGLCSRREAELQIQASKVKVNGV------VITNVTTNVNVENDVVMVKNQVLTTKNRQVWIAHKLKGELITTKDPKGRTTIFDRLQKMGFHQHIMPVGRLDFNTEGLLLLTNDGDYARELEHPSNGVTRVYRALVRGHVLDSKILELKRGPVIHGMKYRPIHVTVQSRNAKDSWLHVLVTEGKNREVRKALAHVRLVVKQLIRIQYGPYRLADLPP-GAVLEVR 259
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: A0A024TUI3_9STRA (S4 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUI3_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.160e-44 Identity = 96/221 (43.44%), Postives = 137/221 (61.99%), Query Frame = 1 Query: 22 MRISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGSMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSS-RGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHL 681 MR+++ +A SRR+A I +G+V V+G V V + V + +P + S R+++AHKLPGE+V+ DP GR T+ RL+AMG + + +VGRLD +EGLLLLT+DG R+LEHP + +QRVYR V G + P +D RG+ D + RPM V ++S+ + K WL++ L EG+NREIR+AM H+ L RLIR +YGPY L Sbjct: 70 MRLAKRMAMAGISSRREAEKIILDGRVVVNGSRVTQVAHNVTFDDVVTVDNKTLPARP-----SKRRVWIAHKLPGELVTSSDPRGRPTIMQRLKAMGFDTHVMAVGRLDYNTEGLLLLTNDGDYARFLEHPKHSVQRVYRVLVWGQVLPSKLDELRRGALVDGVKYRPMEVKIESTTKDKETWLQVKLTEGKNREIRKAMAHVRLVLKRLIRVEYGPYRL 285
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: A0A512HBK2_9PROT (Pseudouridine synthase n=1 Tax=Pararhodospirillum oryzae TaxID=478448 RepID=A0A512HBK2_9PROT) HSP 1 Score: 159 bits (401), Expect = 3.270e-44 Identity = 105/230 (45.65%), Postives = 133/230 (57.83%), Query Frame = 1 Query: 25 RISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGSMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSSRGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHLKQAGPRGAVTE 714 RI++V+AR SRR+A I EG+V ++G V P LV T+QV +P + RL+ HK G V + HDP+GR TLF+RL A +P + VGRLDL SEGLLLLT+DGA+ R LE P R YR RV G +P + A E G D E+ + V++ + WL + L EGRNREIRR M+HLGL RLIR YGP+ L Q P GAV E Sbjct: 31 RIAKVIARAGVCSRREAESLIAEGRVVLNGRPVSTPATLVGASDTVQVDGKPLPARQ------PTRLWRYHKPAGIVTTNHDPQGRPTLFERLPA-DMPRVVK-VGRLDLDSEGLLLLTNDGALARQLELPTQGWLRRYRVRVYGTPDPVRLAALEEGITIDGERFGSIRAVLERQQASNAWLAVSLREGRNREIRRVMEHLGLPVSRLIRVAYGPFQLGQLAP-GAVEE 251
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: A0A1V9YPY2_9STRA (RNA pseudouridine synthase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPY2_9STRA) HSP 1 Score: 158 bits (400), Expect = 5.270e-44 Identity = 90/220 (40.91%), Postives = 138/220 (62.73%), Query Frame = 1 Query: 22 MRISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGSMEIPVQSFASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSSRGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHL 681 +R+++ +A SRR+A I +G+V V+GV V++ V + V + + R+++AHKLPGE+V+ +DP+GR + DRL+ MG+ + +VGRLD +EGLLLLT+DGA R LEHP +QR YRA V+G + P I ++G+ D + RP+ V V+S++ K WL++ L EG+NRE+R+A+ H+ L RL+R +YGPY L Sbjct: 50 LRLAKRLALSGVGSRREAEKIILDGRVAVNGVLVENVAHNVNMTDQVTVDDKPLTFKD------KRRVWIAHKLPGELVTRNDPQGRPIIMDRLKKMGMTQHIIAVGRLDFNTEGLLLLTNDGAYARELEHPQFAVQRTYRALVRGQVLPSKIAELQKGAVVDGVKYRPIQVSVESTKDKDSWLQVKLSEGKNREVRKALAHVRLIVKRLVRVEYGPYRL 263
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Match: H3GHV3_PHYRM (S4 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHV3_PHYRM) HSP 1 Score: 159 bits (402), Expect = 8.140e-44 Identity = 93/234 (39.74%), Postives = 140/234 (59.83%), Query Frame = 1 Query: 22 MRISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGSMEIPVQS-FASSISSARLFLAHKLPGEVVSWHDPEGRVTLFDRLQAMGVPSGLNSVGRLDLLSEGLLLLTDDGAVKRYLEHPGNRIQRVYRARVQGDIEPWMIDARERGSDSDEEQLRPMSVVVQSSRGKTHWLRIVLDEGRNREIRRAMDHLGLRCDRLIRTQYGPYHLKQAGPRGAVTEAK 720 +R+++ +A SRR+A I+ V V+G V D +T+ V E+ V + ++++AHKL GE+V+ DP+GR T+FDR++ MG+ + VGRLD +EGL+L T+DG R LEHP + RVYRA V+G++ P + +RG D + RP++V +QS+ K WL++ + EG+NRE+R+A+ H+ L RLIR QYGPY L P GAV E + Sbjct: 82 VRLAKRIAMSGLCSRREAEKRIQSCDVTVNGRVVADVA------TTVDVLKDEVAVDGRVLTKTQKTKIWMAHKLKGELVTSSDPQGRATIFDRMRVMGLAQHMMPVGRLDFNTEGLMLFTNDGDYARTLEHPKTEVTRVYRALVRGNVAPSKLQELQRGPLVDGVKYRPITVTIQSTDKKDSWLQVKVAEGKNREVRKALAHVRLVVKRLIRVQYGPYRLADL-PSGAVLEVR 308 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70011.16755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig70011.16755.1 >prot_M-pyrifera_M_contig70011.16755.1 ID=prot_M-pyrifera_M_contig70011.16755.1|Name=mRNA_M-pyrifera_M_contig70011.16755.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=233bp MRISRVVARETEWSRRQAIVAIEEGKVRVDGVEVKDPGLLVEEGSTIQVGback to top mRNA from alignment at M-pyrifera_M_contig70011:49..861- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig70011.16755.1 ID=mRNA_M-pyrifera_M_contig70011.16755.1|Name=mRNA_M-pyrifera_M_contig70011.16755.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=813bp|location=Sequence derived from alignment at M-pyrifera_M_contig70011:49..861- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig70011:49..861- >mRNA_M-pyrifera_M_contig70011.16755.1 ID=mRNA_M-pyrifera_M_contig70011.16755.1|Name=mRNA_M-pyrifera_M_contig70011.16755.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1398bp|location=Sequence derived from alignment at M-pyrifera_M_contig70011:49..861- (Macrocystis pyrifera P11B4 male)back to top |